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ONTOLOGY REPORT - ANNOTATIONS

Term:nucleosomal DNA binding
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Accession:GO:0031492 term browser browse the term
Definition:Binding to the DNA portion of a nucleosome.


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nucleosomal DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G H1-0 H1.0 linker histone enables IBA GO_Central GO_REF:0000033 NCBI chr 5:10,038,944...10,041,242
Ensembl chr 5:10,038,966...10,041,067 		JBrowse link
G H1-6 H1.6 linker histone, cluster member enables IBA GO_Central GO_REF:0000033 NCBI chr 7:20,774,135...20,777,244
Ensembl chr 7:20,775,859...20,776,497 		JBrowse link
G H1-7 H1.7 linker histone enables IBA GO_Central GO_REF:0000033 NCBI chr 5:78,699,291...78,700,227
Ensembl chr 5:78,698,577...78,700,109 		JBrowse link
G H1-8 H1.8 linker histone enables ISS
IBA		 CAFA
GO_Central		 GO_REF:0000024 GO_REF:0000033 NCBI chr13:68,921,491...68,943,061
Ensembl chr13:68,938,024...68,942,744 		JBrowse link
G H2AZ1 H2A.Z variant histone 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 8:120,563,752...120,566,023
Ensembl chr 8:120,563,752...120,566,177 		JBrowse link
G H3-3A H3.3 histone A enables ISO (PMID:19633671) UniProt PMID:19633671 NCBI chr10:13,939,938...13,947,976
Ensembl chr10:13,923,077...13,948,484 		JBrowse link
G H3-3B H3.3 histone B enables ISO (PMID:19633671) UniProt PMID:19633671 NCBI chr12:5,632,326...5,634,977
Ensembl chr12:5,632,365...5,634,726 		JBrowse link
G HMGA2 high mobility group AT-hook 2 enables ISO (PMID:17078040) UniProt PMID:17078040 NCBI chr 5:30,188,521...30,329,635 JBrowse link
G HMGN1 high mobility group nucleosome binding domain 1 enables IEA InterPro GO_REF:0000002 NCBI chr13:202,936,313...202,943,496
Ensembl chr13:202,905,233...202,943,575 		JBrowse link
G HMGN2 high mobility group nucleosomal binding domain 2 enables IEA InterPro GO_REF:0000002 NCBI chr 6:83,857,114...83,861,907
Ensembl chr 6:83,858,177...83,861,905 		JBrowse link
G HMGN3 high mobility group nucleosomal binding domain 3 enables IEA InterPro GO_REF:0000002 NCBI chr 1:86,954,468...86,987,465
Ensembl chr 1:86,954,465...86,987,460 		JBrowse link
G HMGN4 high mobility group nucleosomal binding domain 4 enables IEA InterPro GO_REF:0000002 NCBI chr 7:20,998,913...21,003,138
Ensembl chr 7:20,998,957...21,003,134 		JBrowse link
G HMGN5 high mobility group nucleosome binding domain 5 enables IEA InterPro GO_REF:0000002 NCBI chr  X:64,541,310...64,617,345 JBrowse link
G LOC100359361 high mobility group AT-hook 2-like enables ISS UniProt GO_REF:0000024 NCBI chr 1:191,094,785...191,105,394 JBrowse link
G MACROH2A1 macroH2A.1 histone enables IEA Ensembl GO_REF:0000107 NCBI chr 2:137,535,128...137,623,886
Ensembl chr 2:137,534,138...137,623,886 		JBrowse link
G RCC1 regulator of chromosome condensation 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 6:85,540,766...85,565,869
Ensembl chr 6:85,546,024...85,565,866 		JBrowse link
G VRK1 VRK serine/threonine kinase 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 7:117,942,929...118,025,991
Ensembl chr 7:117,942,973...118,028,923 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 19430
    binding 16974
      chromatin binding 659
        chromatin DNA binding 119
          nucleosomal DNA binding 17
Path 2
Term Annotations click to browse term
  molecular_function 19430
    binding 16974
      nucleic acid binding 4057
        DNA binding 2153
          chromatin DNA binding 119
            nucleosomal DNA binding 17
paths to the root