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ONTOLOGY REPORT - ANNOTATIONS


Term:nucleosomal DNA binding
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Accession:GO:0031492 term browser browse the term
Definition:Binding to the DNA portion of a nucleosome.


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nucleosomal DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G H3f3a H3 histone, family 3A enables ISO (PMID:19633671) UniProt PMID:19633671 NCBI chrNW_004955489:269,900...278,398
Ensembl chrNW_004955489:269,900...278,398
JBrowse link
G H3f3b H3 histone, family 3B enables ISO (PMID:19633671) UniProt PMID:19633671 NCBI chrNW_004955506:6,475,336...6,478,781
Ensembl chrNW_004955506:6,474,727...6,482,244
JBrowse link
G Hmga2 high mobility group AT-hook 2 enables ISO (PMID:17078040) UniProt PMID:17078040 NCBI chrNW_004955458:12,493,790...12,624,805 JBrowse link
G LOC102008188 core histone macro-H2A.1 enables ISO (PMID:20008927)
(PMID:18936163)
UniProt PMID:18936163 PMID:20008927 NCBI chrNW_004955408:30,497,531...30,550,095
Ensembl chrNW_004955408:30,497,531...30,550,118
JBrowse link
G LOC102021365 histone H2A.Z enables ISO (PMID:19633671) UniProt PMID:19633671 NCBI chrNW_004955496:7,733,910...7,735,525
Ensembl chrNW_004955496:7,733,918...7,735,525
JBrowse link
G LOC102023622 histone H1oo enables ISO (PMID:22868987) UniProt PMID:22868987 NCBI chrNW_004955429:17,778,193...17,783,307 JBrowse link
G Rcc1 regulator of chromosome condensation 1 enables ISO (PMID:17435751) UniProt PMID:17435751 NCBI chrNW_004955452:7,612,784...7,643,275
Ensembl chrNW_004955452:7,612,784...7,643,275
JBrowse link
G Vrk1 VRK serine/threonine kinase 1 enables ISO (PMID:35390161) UniProt PMID:35390161 NCBI chrNW_004955438:18,508,915...18,595,104
Ensembl chrNW_004955438:18,508,769...18,595,704
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 14380
    binding 13657
      chromatin binding 544
        chromatin DNA binding 86
          nucleosomal DNA binding 8
Path 2
Term Annotations click to browse term
  molecular_function 14380
    binding 13657
      nucleic acid binding 1856
        DNA binding 1363
          chromatin DNA binding 86
            nucleosomal DNA binding 8
paths to the root