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ONTOLOGY REPORT - ANNOTATIONS

Term:chromatin DNA binding
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Accession:GO:0031490 term browser browse the term
Definition:Binding to DNA that is assembled into chromatin.

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chromatin DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTN4 actinin alpha 4 enables IEA Ensembl GO_REF:0000107 NCBI chr 6:33,290,639...33,373,059
Ensembl chr 6:33,290,622...33,374,693 		JBrowse link
G APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1 enables ISO (PMID:11809897) UniProt PMID:11809897 NCBI chr29:20,978,878...20,981,393 JBrowse link
G ATOH1 atonal bHLH transcription factor 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 7:42,098,057...42,104,910
Ensembl chr 7:42,100,996...42,102,060 		JBrowse link
G ATRX ATRX chromatin remodeler enables IEA TreeGrafter GO_REF:0000118 NCBI chr  X:66,449,830...66,737,220
Ensembl chr  X:66,448,449...66,737,164 		JBrowse link
G BAP1 BRCA1 associated deubiquitinase 1 enables IEA Ensembl GO_REF:0000107 NCBI chr22:13,765,510...13,774,866
Ensembl chr22:13,764,686...13,774,740 		JBrowse link
G BCL6 BCL6 transcription repressor enables IEA Ensembl GO_REF:0000107 NCBI chr15:81,997,659...82,022,059
Ensembl chr15:81,998,545...82,009,946 		JBrowse link
G CEBPA CCAAT enhancer binding protein alpha enables IEA Ensembl GO_REF:0000107 NCBI chr 6:28,342,506...28,345,759
Ensembl chr 6:28,343,907...28,344,977 		JBrowse link
G CEBPB CCAAT enhancer binding protein beta enables IEA Ensembl GO_REF:0000107 NCBI chr 2:13,780,538...13,782,639
Ensembl chr 2:13,781,160...13,782,194 		JBrowse link
G CLOCK clock circadian regulator enables IEA Ensembl GO_REF:0000107 NCBI chr 7:13,015,198...13,134,741
Ensembl chr 7:13,051,454...13,127,240 		JBrowse link
G CREBBP CREB binding protein enables IEA TreeGrafter GO_REF:0000118 NCBI chr 5:3,415,548...3,570,030
Ensembl chr 5:3,415,412...3,540,943 		JBrowse link
G DDX17 DEAD-box helicase 17 enables ISO (PMID:29431742) MGI PMID:29431742 NCBI chr19:21,145,576...21,167,091
Ensembl chr19:21,145,417...21,167,543 		JBrowse link
G DHX9 DExH-box helicase 9 enables IEA Ensembl GO_REF:0000107 NCBI chr25:46,485,602...46,534,046
Ensembl chr25:46,485,427...46,518,406 		JBrowse link
G EOMES eomesodermin enables ISO (PMID:30186101) MGI PMID:30186101 NCBI chr15:72,257,626...72,264,563 JBrowse link
G EP300 E1A binding protein p300 enables ISO
IEA		 RGD
TreeGrafter
Ensembl		 PMID:20702579 GO_REF:0000107 GO_REF:0000118 RGD:5128544 NCBI chr19:23,634,132...23,726,095
Ensembl chr19:23,634,571...23,724,979 		JBrowse link
G EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit enables IEA Ensembl GO_REF:0000107 NCBI chr21:117,380,518...117,515,224
Ensembl chr21:117,380,361...117,421,573 		JBrowse link
G FOXC2 forkhead box C2 enables IEA Ensembl GO_REF:0000107 NCBI chr 5:71,951,980...71,955,021
Ensembl chr 5:71,952,632...71,954,134 		JBrowse link
G FOXO1 forkhead box O1 enables ISO (PMID:29320745) MGI PMID:29320745 NCBI chr 3:18,916,849...19,027,776
Ensembl chr 3:18,920,651...19,027,707 		JBrowse link
G FOXO3 forkhead box O3 enables IEA Ensembl GO_REF:0000107 NCBI chr13:65,175,764...65,303,107
Ensembl chr13:65,195,376...65,301,725 		JBrowse link
G GATA1 GATA binding protein 1 enables IEA Ensembl GO_REF:0000107 NCBI chr  X:45,912,638...45,920,415
Ensembl chr  X:45,917,231...45,920,268 		JBrowse link
G GLI2 GLI family zinc finger 2 enables IEA Ensembl GO_REF:0000107 NCBI chr10:9,302,890...9,561,287
Ensembl chr10:9,304,645...9,369,115 		JBrowse link
G GRHL1 grainyhead like transcription factor 1 enables ISO (PMID:21081122) UniProt PMID:21081122 NCBI chr14:97,632,494...97,686,257 JBrowse link
G GRHL1 grainyhead like transcription factor 1 enables IEA Ensembl GO_REF:0000107 Ensembl chr14:97,643,358...97,686,191 JBrowse link
G GRHL2 grainyhead like transcription factor 2 enables IEA Ensembl GO_REF:0000107 NCBI chr 8:96,340,459...96,526,366
Ensembl chr 8:96,342,189...96,526,363 		JBrowse link
G GRHL3 grainyhead like transcription factor 3 enables IEA Ensembl GO_REF:0000107 NCBI chr20:108,338,891...108,375,351
Ensembl chr20:108,330,121...108,361,887 		JBrowse link
G H1-1 H1.1 linker histone, cluster member enables IEA Ensembl GO_REF:0000107 NCBI chr17:46,235,596...46,239,777
Ensembl chr17:46,237,985...46,238,629 		JBrowse link
G H1-2 H1.2 linker histone, cluster member enables IEA Ensembl GO_REF:0000107 NCBI chr17:46,199,245...46,200,970
Ensembl chr17:46,199,304...46,199,942 		JBrowse link
G H1-3 H1.3 linker histone, cluster member enables IEA Ensembl GO_REF:0000107 NCBI chr17:46,016,618...46,017,989
Ensembl chr17:46,016,693...46,017,355 		JBrowse link
G H1-4 H1.4 linker histone, cluster member enables IEA Ensembl GO_REF:0000107 NCBI chr17:46,099,264...46,100,067
Ensembl chr17:46,099,330...46,099,986 		JBrowse link
G H1-5 H1.5 linker histone, cluster member enables IEA Ensembl GO_REF:0000107 NCBI chr17:44,663,976...44,664,753
Ensembl chr17:44,664,042...44,664,719 		JBrowse link
G H1F0 H1 histone family member 0 enables IEA Ensembl GO_REF:0000107 NCBI chr19:20,505,629...20,507,973
Ensembl chr19:20,506,080...20,506,664 		JBrowse link
G H2AFY core histone macro-H2A.1 enables IEA Ensembl
UniProt		 GO_REF:0000104 GO_REF:0000107 NCBI chr23:38,113,212...38,178,227
Ensembl chr23:38,113,195...38,168,382 		JBrowse link
G H2AFY2 H2A histone family member Y2 enables IEA UniProt
Ensembl		 GO_REF:0000104 GO_REF:0000107 NCBI chr 9:61,194,887...61,254,361
Ensembl chr 9:61,195,431...61,231,228 		JBrowse link
G HCFC1 host cell factor C1 enables ISO (PMID:22878500) MGI PMID:22878500 NCBI chr  X:128,371,518...128,395,920
Ensembl chr  X:128,371,517...128,394,861 		JBrowse link
G HDAC2 histone deacetylase 2 enables ISO (PMID:18458156) MGI PMID:18458156 NCBI chr13:59,873,248...59,904,542
Ensembl chr13:59,873,767...59,905,742 		JBrowse link
G HDAC3 histone deacetylase 3 enables ISO (PMID:18458156), (PMID:32467224) MGI PMID:18458156 PMID:32467224 NCBI chr23:44,246,296...44,263,127 JBrowse link
G HNRNPU heterogeneous nuclear ribonucleoprotein U enables IEA Ensembl GO_REF:0000107 NCBI chr25:81,879,532...81,890,684
Ensembl chr25:81,878,111...81,890,701 		JBrowse link
G HR HR lysine demethylase and nuclear receptor corepressor enables IEA TreeGrafter GO_REF:0000118 NCBI chr 8:20,183,797...20,207,510
Ensembl chr 8:20,183,677...20,198,700 		JBrowse link
G HSF1 heat shock transcription factor 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 8:138,503,836...138,529,562
Ensembl chr 8:138,503,831...138,529,165 		JBrowse link
G INSM1 INSM transcriptional repressor 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 2:49,360,307...49,363,136
Ensembl chr 2:49,360,448...49,361,992 		JBrowse link
G KDM3A lysine demethylase 3A enables IEA TreeGrafter GO_REF:0000118 NCBI chr14:20,668,215...20,721,854
Ensembl chr14:20,668,821...20,720,759 		JBrowse link
G KDM3B lysine demethylase 3B enables IEA TreeGrafter GO_REF:0000118 NCBI chr23:41,027,490...41,111,560
Ensembl chr23:41,062,020...41,112,469 		JBrowse link
G KDM5A lysine demethylase 5A enables ISO (PMID:18483221) MGI PMID:18483221 NCBI chr11:285,206...381,481
Ensembl chr11:286,728...381,430 		JBrowse link
G KDM6A lysine demethylase 6A enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr  X:42,053,272...42,291,013
Ensembl chr  X:42,053,336...42,290,526 		JBrowse link
G KDM6B lysine demethylase 6B enables IEA TreeGrafter GO_REF:0000118 NCBI chr16:7,221,769...7,241,230
Ensembl chr16:7,232,426...7,241,040 		JBrowse link
G KLF4 KLF transcription factor 4 enables IEA Ensembl GO_REF:0000107 NCBI chr12:32,045,690...32,050,531
Ensembl chr12:32,045,609...32,050,703 		JBrowse link
G LEMD2 LEM domain nuclear envelope protein 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chr17:38,291,100...38,309,134
Ensembl chr17:38,291,217...38,307,745 		JBrowse link
G LEMD3 LEM domain containing 3 enables IEA TreeGrafter GO_REF:0000118 NCBI chr11:60,861,671...60,945,858
Ensembl chr11:60,862,265...60,946,040 		JBrowse link
G LOC103236032 histone H2A.Z enables ISO (PMID:19834540), (PMID:23637611) UniProt PMID:19834540 PMID:23637611 NCBI chr 7:48,079,894...48,082,147 JBrowse link
G LOC103239432 myoblast determination protein 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 1:47,250,927...47,254,572
Ensembl chr 1:47,251,551...47,253,284 		JBrowse link
G LOC103245755 WW domain-binding protein 2-like enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr26:40,120,432...40,122,225 JBrowse link
G LOC103248265 lysine-specific demethylase 4D enables IEA Ensembl GO_REF:0000107 NCBI chr 1:86,190,515...86,215,061
Ensembl chr 1:86,212,761...86,214,490 		JBrowse link
G MECP2 methyl-CpG binding protein 2 ISO RGD PMID:9038338 RGD:1601325 NCBI chr  X:128,445,028...128,519,892
Ensembl chr  X:128,453,577...128,455,785 		JBrowse link
G MED1 mediator complex subunit 1 ISO RGD PMID:20702579 RGD:5128544 NCBI chr16:66,719,393...66,764,902
Ensembl chr16:66,719,423...66,762,896 		JBrowse link
G MYOG myogenin enables IEA Ensembl GO_REF:0000107 NCBI chr25:26,264,872...26,269,652
Ensembl chr25:26,266,717...26,268,867 		JBrowse link
G NEUROG3 neurogenin 3 enables IEA Ensembl GO_REF:0000107 NCBI chr 9:61,743,562...61,746,884
Ensembl chr 9:61,744,332...61,744,979 		JBrowse link
G NKAP NFKB activating protein enables ISO (PMID:20610818) MGI PMID:20610818
G NOTCH1 notch receptor 1 enables IEA Ensembl GO_REF:0000107 NCBI chr12:1,656,815...1,707,566
Ensembl chr12:1,656,918...1,709,585 		JBrowse link
G NR1H2 nuclear receptor subfamily 1 group H member 2 enables IEA Ensembl GO_REF:0000107 NCBI chr 6:43,438,428...43,445,190
Ensembl chr 6:43,437,950...43,446,063 		JBrowse link
G NR1H3 nuclear receptor subfamily 1 group H member 3 enables IEA Ensembl GO_REF:0000107 NCBI chr 1:18,041,495...18,061,196
Ensembl chr 1:18,041,830...18,051,501 		JBrowse link
G OGT O-linked N-acetylglucosamine (GlcNAc) transferase enables IEA Ensembl GO_REF:0000107 NCBI chr  X:61,351,047...61,393,541
Ensembl chr  X:61,351,054...61,394,305 		JBrowse link
G PAX6 paired box 6 enables IEA Ensembl GO_REF:0000107 NCBI chr 1:33,386,165...33,414,605
Ensembl chr 1:33,392,970...33,414,587 		JBrowse link
G PER1 period circadian regulator 1 enables IEA Ensembl GO_REF:0000107 NCBI chr16:7,520,122...7,536,176
Ensembl chr16:7,520,006...7,531,940 		JBrowse link
G PITX2 paired like homeodomain 2 enables ISO (PMID:21035439) MGI PMID:21035439 NCBI chr 7:58,501,669...58,526,413
Ensembl chr 7:58,501,559...58,507,318 		JBrowse link
G POLE3 DNA polymerase epsilon 3, accessory subunit enables IEA TreeGrafter GO_REF:0000118 NCBI chr12:26,162,934...26,164,931
Ensembl chr12:26,163,107...26,165,214 		JBrowse link
G POU5F1 POU class 5 homeobox 1 enables ISO (PMID:24268575) MGI PMID:24268575 NCBI chr17:41,306,523...41,313,065 JBrowse link
G POU5F1 POU class 5 homeobox 1 enables IEA Ensembl GO_REF:0000107 Ensembl chr17:41,311,005...41,315,373 JBrowse link
G PPARGC1A PPARG coactivator 1 alpha enables IEA Ensembl GO_REF:0000107 NCBI chr27:25,882,385...26,563,530
Ensembl chr27:26,465,499...26,564,582 		JBrowse link
G PRDM14 PR/SET domain 14 enables IEA Ensembl GO_REF:0000107 NCBI chr 8:65,800,454...65,820,190
Ensembl chr 8:65,800,923...65,819,456 		JBrowse link
G RARA retinoic acid receptor alpha enables IEA Ensembl GO_REF:0000107 NCBI chr16:65,817,849...65,866,862
Ensembl chr16:65,817,757...65,866,878 		JBrowse link
G RELA RELA proto-oncogene, NF-kB subunit enables IEA Ensembl GO_REF:0000107 NCBI chr 1:8,576,059...8,585,561
Ensembl chr 1:8,576,542...8,586,516 		JBrowse link
G RUNX2 RUNX family transcription factor 2 enables IEA Ensembl GO_REF:0000107 NCBI chr17:26,679,386...26,807,812
Ensembl chr17:26,683,175...26,807,319 		JBrowse link
G RUVBL2 RuvB like AAA ATPase 2 enables IEA Ensembl GO_REF:0000107 NCBI chr 6:42,227,982...42,247,204
Ensembl chr 6:42,227,821...42,249,707 		JBrowse link
G RXRA retinoid X receptor alpha enables ISO (PMID:17952069), (PMID:29431742) MGI PMID:17952069 PMID:29431742 NCBI chr12:3,704,129...3,814,707
Ensembl chr12:3,699,923...3,814,678 		JBrowse link
G RXRB retinoid X receptor beta enables ISO (PMID:29431742) MGI PMID:29431742 NCBI chr17:38,874,467...38,881,527
Ensembl chr17:38,874,681...38,881,653 		JBrowse link
G SBNO1 strawberry notch homolog 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chr11:118,633,151...118,702,472
Ensembl chr11:118,634,332...118,677,415 		JBrowse link
G SBNO2 strawberry notch homolog 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 6:877,066...950,663
Ensembl chr 6:877,049...931,433 		JBrowse link
G SIRT6 sirtuin 6 enables IEA Ensembl GO_REF:0000107 NCBI chr 6:3,924,230...3,932,583
Ensembl chr 6:3,924,230...3,932,590 		JBrowse link
G SMAD3 SMAD family member 3 enables IEA Ensembl GO_REF:0000107 NCBI chr26:16,319,959...16,446,472
Ensembl chr26:16,320,933...16,446,527 		JBrowse link
G SOX2 SRY-box transcription factor 2 enables ISO (PMID:24268575) MGI PMID:24268575 NCBI chr15:7,673,581...7,676,812
Ensembl chr15:7,674,867...7,675,826 		JBrowse link
G SRF serum response factor enables IEA Ensembl GO_REF:0000107 NCBI chr17:28,983,161...28,993,465
Ensembl chr17:28,983,002...28,992,995 		JBrowse link
G STAT3 signal transducer and activator of transcription 3 enables IEA Ensembl GO_REF:0000107 NCBI chr16:63,877,884...63,957,894
Ensembl chr16:63,922,862...63,957,984 		JBrowse link
G SUZ12 SUZ12 polycomb repressive complex 2 subunit enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr16:25,413,928...25,474,311
Ensembl chr16:25,413,954...25,476,479 		JBrowse link
G TBR1 T-box brain transcription factor 1 enables IEA Ensembl GO_REF:0000107 NCBI chr10:46,819,396...46,831,590
Ensembl chr10:46,819,393...46,828,008 		JBrowse link
G THRA thyroid hormone receptor alpha enables ISO (PMID:17952069) MGI PMID:17952069 NCBI chr16:66,087,071...66,118,137 JBrowse link
G THRA thyroid hormone receptor alpha enables IEA Ensembl GO_REF:0000107 Ensembl chr16:66,085,067...66,118,079 JBrowse link
G THRB thyroid hormone receptor beta enables IEA Ensembl GO_REF:0000107 NCBI chr15:68,797,410...69,161,256
Ensembl chr15:68,802,078...68,902,292 		JBrowse link
G TOP1 DNA topoisomerase I ISO RGD PMID:1332866 RGD:1580856 NCBI chr 2:22,655,085...22,751,082
Ensembl chr 2:22,651,995...22,751,102 		JBrowse link
G TOX thymocyte selection associated high mobility group box enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:54,777,490...55,086,819
Ensembl chr 8:54,776,015...54,927,091 		JBrowse link
G TOX2 TOX high mobility group box family member 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 2:19,747,852...19,902,892
Ensembl chr 2:19,747,857...19,902,828 		JBrowse link
G TOX3 TOX high mobility group box family member 3 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 5:38,197,059...38,304,582
Ensembl chr 5:38,197,066...38,304,264 		JBrowse link
G TOX4 TOX high mobility group box family member 4 enables IEA TreeGrafter GO_REF:0000118 NCBI chr29:21,946,311...21,966,197
Ensembl chr29:21,945,901...21,965,740 		JBrowse link
G VAX1 ventral anterior homeobox 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 9:109,925,282...109,935,003
Ensembl chr 9:109,930,708...109,934,763 		JBrowse link
G VAX2 ventral anterior homeobox 2 enables IEA Ensembl GO_REF:0000107 NCBI chr14:36,180,084...36,213,534
Ensembl chr14:36,180,324...36,213,439 		JBrowse link
G WBP2 WW domain binding protein 2 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr16:45,821,875...45,836,558
Ensembl chr16:45,821,967...45,835,530 		JBrowse link
G WBP2NL WBP2 N-terminal like enables IEA TreeGrafter GO_REF:0000118 NCBI chr19:24,533,727...24,573,482
Ensembl chr19:24,554,895...24,567,023 		JBrowse link
G XBP1 X-box binding protein 1 enables ISO (PMID:25280941) UniProt PMID:25280941 NCBI chr19:11,670,605...11,677,168 JBrowse link
G ZIC2 Zic family member 2 enables ISO (PMID:20676059) UniProt PMID:20676059 NCBI chr 3:78,631,556...78,637,422
Ensembl chr 3:78,631,530...78,636,548 		JBrowse link
chromatin insulator sequence binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTCF CCCTC-binding factor enables IEA Ensembl GO_REF:0000107 NCBI chr 5:59,806,753...59,889,534
Ensembl chr 5:59,806,551...59,880,049 		JBrowse link
chromatin loop anchoring activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTCF CCCTC-binding factor enables IEA Ensembl GO_REF:0000107 NCBI chr 5:59,806,753...59,889,534
Ensembl chr 5:59,806,551...59,880,049 		JBrowse link
nucleosomal DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G H1-2 H1.2 linker histone, cluster member enables IEA TreeGrafter GO_REF:0000118 NCBI chr17:46,199,245...46,200,970
Ensembl chr17:46,199,304...46,199,942 		JBrowse link
G H1F0 H1 histone family member 0 enables IEA TreeGrafter GO_REF:0000118 NCBI chr19:20,505,629...20,507,973
Ensembl chr19:20,506,080...20,506,664 		JBrowse link
G H1FOO H1 histone family member O, oocyte specific enables ISO (PMID:22868987) UniProt PMID:22868987 NCBI chr22:51,497,111...51,506,007 JBrowse link
G H2AFY core histone macro-H2A.1 enables IEA Ensembl GO_REF:0000107 NCBI chr23:38,113,212...38,178,227
Ensembl chr23:38,113,195...38,168,382 		JBrowse link
G HMGA2 high mobility group AT-hook 2 enables ISO (PMID:17078040) UniProt PMID:17078040 NCBI chr11:61,509,114...61,655,633 JBrowse link
G HMGN1 high mobility group nucleosome binding domain 1 enables IEA InterPro GO_REF:0000002 Ensembl chr 2:83,297,315...83,303,581 JBrowse link
G HMGN3 high mobility group nucleosomal binding domain 3 enables IEA InterPro GO_REF:0000002 NCBI chr13:3,909,460...3,943,339
Ensembl chr13:3,909,430...3,942,394 		JBrowse link
G HMGN4 high mobility group nucleosomal binding domain 4 enables IEA InterPro GO_REF:0000002 NCBI chr17:45,667,759...45,676,476
Ensembl chr17:45,669,090...45,676,295 		JBrowse link
G HMGN5 high mobility group nucleosome binding domain 5 enables IEA InterPro GO_REF:0000002 NCBI chr  X:70,103,170...70,201,472
Ensembl chr  X:70,102,034...70,111,019 		JBrowse link
G LOC103215546 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like enables IEA TreeGrafter GO_REF:0000118 NCBI chr 2:53,170,987...53,172,360 JBrowse link
G LOC103220086 non-histone chromosomal protein HMG-17-like enables IEA InterPro GO_REF:0000002 NCBI chr14:36,307,595...36,308,999 JBrowse link
G LOC103230211 non-histone chromosomal protein HMG-17-like enables IEA InterPro GO_REF:0000002 NCBI chr25:23,472,174...23,472,904 JBrowse link
G LOC103231004 histone H3.3A enables IEA Ensembl GO_REF:0000107 NCBI chr25:3,696,153...3,704,886 JBrowse link
G LOC103234243 non-histone chromosomal protein HMG-17 enables IEA InterPro GO_REF:0000002 NCBI chr 6:18,565,341...18,598,274 JBrowse link
G LOC103234925 non-histone chromosomal protein HMG-17 enables IEA InterPro GO_REF:0000002 NCBI chr 6:40,146,192...40,147,361 JBrowse link
G LOC103236032 histone H2A.Z enables ISO (PMID:19633671) UniProt PMID:19633671 NCBI chr 7:48,079,894...48,082,147 JBrowse link
G LOC103236261 non-histone chromosomal protein HMG-17 enables IEA InterPro GO_REF:0000002 NCBI chr 7:80,967,135...80,968,366 JBrowse link
G LOC103243033 histone H3.3A enables IEA Ensembl GO_REF:0000107 NCBI chr16:45,903,252...45,905,605
Ensembl chr16:45,902,980...45,904,929 		JBrowse link
G LOC119620624 non-histone chromosomal protein HMG-17-like enables IEA InterPro GO_REF:0000002
G LOC119625179 histone H3.3A enables IEA Ensembl GO_REF:0000107
G LOC119625328 histone H3.3A enables IEA Ensembl GO_REF:0000107
G LOC119626586 non-histone chromosomal protein HMG-17 enables IEA InterPro GO_REF:0000002
G LOC119626591 non-histone chromosomal protein HMG-17 enables IEA InterPro GO_REF:0000002
G LOC119628071 histone H3.3A enables IEA Ensembl GO_REF:0000107
G LOC119628317 non-histone chromosomal protein HMG-17-like enables IEA InterPro GO_REF:0000002
G RCC1 regulator of chromosome condensation 1 enables IEA Ensembl GO_REF:0000107 NCBI chr20:104,256,895...104,279,948
Ensembl chr20:104,257,877...104,278,458 		JBrowse link
G SMARCE1 SWI/SNF related BAF chromatin remodeling complex subunit E1 enables IEA TreeGrafter GO_REF:0000118 NCBI chr16:65,539,138...65,559,810
Ensembl chr16:65,541,513...65,561,401 		JBrowse link
G VRK1 VRK serine/threonine kinase 1 enables IEA Ensembl GO_REF:0000107 NCBI chr24:74,686,102...74,770,496
Ensembl chr24:74,686,111...74,770,874 		JBrowse link
promoter-enhancer loop anchoring activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHDC1 AT-hook DNA binding motif containing 1 enables IEA Ensembl GO_REF:0000107 NCBI chr20:105,187,943...105,257,767
Ensembl chr20:105,239,747...105,244,558 		JBrowse link
G MSL2 MSL complex subunit 2 enables IEA Ensembl GO_REF:0000107 NCBI chr15:54,246,090...54,290,809
Ensembl chr15:54,246,127...54,288,555 		JBrowse link
G PCBP2 poly(rC) binding protein 2 enables ISO (PMID:31361039) FlyBase PMID:31361039 NCBI chr11:49,548,615...49,580,962 JBrowse link
G RUVBL2 RuvB like AAA ATPase 2 enables IEA Ensembl GO_REF:0000107 NCBI chr 6:42,227,982...42,247,204
Ensembl chr 6:42,227,821...42,249,707 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 19845
    binding 18023
      chromatin binding 669
        chromatin DNA binding 125
          chromatin insulator sequence binding 1
          chromatin loop anchoring activity + 5
          nucleosomal DNA binding 28
Path 2
Term Annotations click to browse term
  molecular_function 19845
    binding 18023
      nucleic acid binding 4834
        DNA binding 2244
          chromatin DNA binding 125
            chromatin insulator sequence binding 1
            chromatin loop anchoring activity + 5
            nucleosomal DNA binding 28
paths to the root