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ONTOLOGY REPORT - ANNOTATIONS

Term:Cul3-RING ubiquitin ligase complex
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Accession:GO:0031463 term browser browse the term
Definition:A ubiquitin ligase complex in which a cullin from the Cul3 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by a BTB-domain-containing protein.
Synonyms:exact_synonym: BC3B complex;   BCR3 complex;   CDL3 complex;   CRL3 complex;   cullin-RING ligase 3
 related_synonym: SCF3 complex


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Cul3-RING ubiquitin ligase complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arih1 ariadne RBR E3 ubiquitin protein ligase 1 located_in ISO (PMID:24076655), (PMID:27565346) RGD PMID:24076655 PMID:27565346 NCBI chr 8:68,673,199...68,775,648
Ensembl chr 8:59,777,379...59,880,245 		JBrowse link
G Armc5 armadillo repeat containing 5 part_of ISS
ISO
IEA		 GO_REF:0000024
(PMID:35687106), (PMID:35862218), (PMID:38225631), (PMID:39504960), (PMID:39667934)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:35687106 PMID:35862218 PMID:38225631 PMID:39504960 PMID:39667934 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:192,250,580...192,257,347
Ensembl chr 1:182,820,141...182,826,907 		JBrowse link
G Ccin calicin part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:63,002,427...63,004,314
Ensembl chr 5:58,206,633...58,208,951 		JBrowse link
G Cul3 cullin 3 part_of ISS
ISO
IBA
IEA		 GO_REF:0000024
(PMID:14528312), (PMID:15983046), (PMID:17543862), (PMID:19158078), (PMID:19261606), (PMID:19782033), (PMID:19995937), (PMID:20389280), (PMID:22358839), (PMID:22578813), (PMID:23453970), (PMID:23455478), (PMID:23576762), (PMID:24768539), (PMID:25684205), (PMID:26399832), (PMID:35687106), (PMID:35862218), (PMID:38225631), (PMID:39504960), (PMID:39667934)
GO_REF:0000033
GO_REF:0000107		 UniProt
RGD
GO_Central
Ensembl		 PMID:14528312 PMID:15983046 PMID:17543862 PMID:19158078 PMID:19261606 More... GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:89,040,987...89,118,775
Ensembl chr 9:81,592,641...81,670,462 		JBrowse link
G Depdc5 DEP domain containing 5, GATOR1 subcomplex subunit located_in ISO
IEA		 (PMID:29769719)
GO_REF:0000107		 RGD
Ensembl		 PMID:29769719 GO_REF:0000107 NCBI chr14:77,732,297...77,862,924
Ensembl chr14:77,732,297...77,862,794 		JBrowse link
G Enc1 ectodermal-neural cortex 1 part_of ISO
IEA
IBA		 (PMID:15983046)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:15983046 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:28,550,670...28,562,591
Ensembl chr 2:28,550,464...28,562,713 		JBrowse link
G Gan gigaxonin part_of ISO
IBA		 (PMID:15983046)
GO_REF:0000033		 RGD
GO_Central		 PMID:15983046 GO_REF:0000033 NCBI chr19:62,116,600...62,173,879
Ensembl chr19:45,207,184...45,254,107 		JBrowse link
G Glmn glomulin, FKBP associated protein part_of ISO
IEA		 UniProtKB:Q13618 (PMID:22405651)
GO_REF:0000107		 RGD
Ensembl		 PMID:22405651 GO_REF:0000107 NCBI chr14:2,332,052...2,375,366
Ensembl chr14:2,187,642...2,230,420 		JBrowse link
G Ipp intracisternal A particle-promoted polypeptide part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:135,199,198...135,237,912
Ensembl chr 5:129,962,643...130,001,242 		JBrowse link
G Ivns1abp influenza virus NS1A binding protein part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:65,977,069...65,996,685
Ensembl chr13:63,427,041...63,446,701 		JBrowse link
G Katna1 katanin catalytic subunit A1 part_of ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:2,202,501...2,244,132
Ensembl chr 1:2,202,490...2,244,131 		JBrowse link
G Kbtbd12 kelch repeat and BTB domain containing 12 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:122,571,903...122,645,895
Ensembl chr 4:121,016,257...121,088,443 		JBrowse link
G Kbtbd2 kelch repeat and BTB domain containing 2 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:87,358,133...87,380,399
Ensembl chr 4:86,027,947...86,050,211 		JBrowse link
G Kbtbd3 kelch repeat and BTB domain containing 3 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:9,749,229...9,780,036
Ensembl chr 8:1,473,247...1,487,943 		JBrowse link
G Kbtbd6 kelch repeat and BTB domain containing 6 part_of ISO
IBA		 (PMID:25684205)
GO_REF:0000033		 RGD
GO_Central		 PMID:25684205 GO_REF:0000033 NCBI chr15:61,257,360...61,259,117
Ensembl chr15:54,848,446...54,850,453 		JBrowse link
G Kbtbd7 kelch repeat and BTB domain containing 7 part_of ISO
IBA		 (PMID:25684205)
GO_REF:0000033		 RGD
GO_Central		 PMID:25684205 GO_REF:0000033 NCBI chr15:61,215,957...61,220,536
Ensembl chr15:54,806,873...54,811,687 		JBrowse link
G Kbtbd8 kelch repeat and BTB domain containing 8 part_of ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:26399832)		 UniProt
GO_Central
RGD		 PMID:26399832 GO_REF:0000024 GO_REF:0000033 NCBI chr 4:129,232,781...129,245,608
Ensembl chr 4:127,676,141...127,687,697 		JBrowse link
G Kctd10 potassium channel tetramerization domain containing 10 part_of ISS
IBA		 GO_REF:0000024
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000024 GO_REF:0000033 NCBI chr12:47,890,777...47,909,391
Ensembl chr12:42,230,269...42,248,783 		JBrowse link
G Kctd13 potassium channel tetramerization domain containing 13 part_of ISO
IEA		 (PMID:19782033)
GO_REF:0000107		 RGD
Ensembl		 PMID:19782033 GO_REF:0000107 NCBI chr 1:190,965,073...190,983,381
Ensembl chr 1:181,534,515...181,552,881 		JBrowse link
G Kctd17 potassium channel tetramerization domain containing 17 part_of ISO
IEA
IBA		 (PMID:25270598)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:25270598 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:111,859,556...111,891,869
Ensembl chr 7:109,979,060...110,008,927 		JBrowse link
G Kctd2 potassium channel tetramerization domain containing 2 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:101,162,091...101,173,721
Ensembl chr10:100,662,884...100,674,336 		JBrowse link
G Kctd5 potassium channel tetramerization domain containing 5 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:13,583,781...13,609,762
Ensembl chr10:13,079,214...13,105,209 		JBrowse link
G Keap1 Kelch-like ECH-associated protein 1 part_of ISO
IBA
IEA
ISS		 (PMID:15601839), (PMID:15983046)
GO_REF:0000033
(PMID:15282312), (PMID:15367669)
GO_REF:0000107
GO_REF:0000024		 RGD
GO_Central
Ensembl
UniProt		 PMID:15282312 PMID:15367669 PMID:15601839 PMID:15983046 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:28,044,555...28,054,042
Ensembl chr 8:19,768,375...19,777,862 		JBrowse link
G Klhl1 kelch-like family member 1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:79,106,164...79,550,684
Ensembl chr15:72,699,094...73,142,594 		JBrowse link
G Klhl10 kelch-like family member 10 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:85,876,804...85,893,081
Ensembl chr10:85,376,442...85,392,720 		JBrowse link
G Klhl11 kelch-like family member 11 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:85,898,847...85,909,406
Ensembl chr10:85,398,487...85,409,049 		JBrowse link
G Klhl12 kelch-like family member 12 part_of IEA
IBA
ISO
ISS		 GO_REF:0000107
GO_REF:0000033
(PMID:22358839)
GO_REF:0000024		 Ensembl
GO_Central
RGD
UniProt		 PMID:22358839 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr13:48,451,920...48,485,638
Ensembl chr13:45,899,928...45,933,643 		JBrowse link
G Klhl13 kelch-like family member 13 part_of ISO
IEA
IBA		 (PMID:14528312), (PMID:17543862)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:14528312 PMID:17543862 GO_REF:0000033 GO_REF:0000107 NCBI chr  X:113,942,309...114,107,299
Ensembl chr  X:113,942,309...114,107,321 		JBrowse link
G Klhl15 kelch-like family member 15 located_in
part_of		 ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000002
GO_REF:0000107
(PMID:27561354)		 UniProt
InterPro
Ensembl
RGD		 PMID:27561354 GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:62,987,762...63,043,980
Ensembl chr  X:58,995,461...59,046,069 		JBrowse link
G Klhl17 kelch-like family member 17 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:172,095,701...172,101,945
Ensembl chr 5:166,814,110...166,818,925 		JBrowse link
G Klhl18 kelch-like family member 18 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:119,279,081...119,337,850
Ensembl chr 8:110,400,681...110,459,323 		JBrowse link
G Klhl2 kelch-like family member 2 part_of ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:21549840)		 UniProt
GO_Central
RGD		 PMID:21549840 GO_REF:0000024 GO_REF:0000033 NCBI chr16:29,627,171...29,739,782
Ensembl chr16:24,860,667...24,973,341 		JBrowse link
G Klhl20 kelch-like family member 20 part_of ISO
IBA
IEA
ISS		 (PMID:20389280), (PMID:24768539)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024		 RGD
GO_Central
Ensembl
UniProt		 PMID:20389280 PMID:24768539 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr13:75,896,802...75,941,724
Ensembl chr13:73,363,455...73,408,337 		JBrowse link
G Klhl21 kelch-like family member 21 part_of ISO
IEA
IBA
ISS		 (PMID:19995937)
GO_REF:0000107
GO_REF:0000033
GO_REF:0000024		 RGD
Ensembl
GO_Central
UniProt		 PMID:19995937 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:167,797,621...167,806,276
Ensembl chr 5:162,514,765...162,523,545 		JBrowse link
G Klhl22 kelch-like family member 22 part_of ISO
IBA
IEA
ISS		 (PMID:19995937), (PMID:23455478)
GO_REF:0000033
GO_REF:0000002
GO_REF:0000024		 RGD
GO_Central
InterPro
UniProt		 PMID:19995937 PMID:23455478 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 NCBI chr11:96,695,168...96,736,079
Ensembl chr11:83,190,891...83,231,770 		JBrowse link
G Klhl23 kelch-like family member 23 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:74,988,778...75,002,347
Ensembl chr 3:54,580,961...54,594,530 		JBrowse link
G Klhl24 kelch-like family member 24 part_of ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000107
(PMID:27798626)		 UniProt
GO_Central
Ensembl
RGD		 PMID:27798626 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr11:94,348,024...94,382,085
Ensembl chr11:80,846,755...80,877,636 		JBrowse link
G Klhl25 kelch-like family member 25 part_of ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:34491895)
(PMID:22578813), (PMID:27664236)		 UniProt
Ensembl
RGD		 PMID:22578813 PMID:27664236 PMID:34491895 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:139,134,655...139,159,898
Ensembl chr 1:129,722,026...129,750,227 		JBrowse link
G Klhl28 kelch-like family member 28 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:88,723,624...88,755,072
Ensembl chr 6:82,990,945...83,016,164 		JBrowse link
G Klhl29 kelch-like family member 29 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:33,805,922...34,110,055
Ensembl chr 6:28,086,489...28,390,647 		JBrowse link
G Klhl3 kelch-like family member 3 part_of ISO
IBA
IEA
ISS		 (PMID:23453970), (PMID:23576762)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024		 RGD
GO_Central
Ensembl
UniProt		 PMID:23453970 PMID:23576762 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr17:6,528,114...6,651,338
Ensembl chr17:6,521,912...6,642,154 		JBrowse link
G Klhl30 kelch-like family member 30 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:99,389,982...99,400,295
Ensembl chr 9:91,942,504...91,952,730 		JBrowse link
G Klhl35 kelch-like family member 35 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:163,172,811...163,185,663
Ensembl chr 1:153,767,970...153,773,557 		JBrowse link
G Klhl38 kelch-like family member 38 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:91,744,634...91,753,843
Ensembl chr 7:89,855,148...89,864,276 		JBrowse link
G Klhl4 kelch-like family member 4 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:83,626,047...83,916,328
Ensembl chr  X:79,622,113...79,719,480 		JBrowse link
G Klhl40 kelch-like family member 40 part_of ISO
IBA		 (PMID:24361185)
GO_REF:0000033		 RGD
GO_Central		 PMID:24361185 GO_REF:0000033 NCBI chr 8:130,318,793...130,324,309
Ensembl chr 8:121,441,287...121,446,800 		JBrowse link
G Klhl41 kelch-like family member 41 part_of ISO
IBA		 (PMID:15983046)
GO_REF:0000033		 RGD
GO_Central		 PMID:15983046 GO_REF:0000033 NCBI chr 3:74,842,118...74,855,244
Ensembl chr 3:54,434,234...54,449,222 		JBrowse link
G Klhl42 kelch-like family, member 42 part_of ISO
IEA		 (PMID:19261606)
GO_REF:0000107		 RGD
Ensembl		 PMID:19261606 GO_REF:0000107 NCBI chr 4:179,999,655...180,027,283
Ensembl chr 4:180,004,580...180,027,283 		JBrowse link
G Klhl5 kelch-like family member 5 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:43,497,915...43,565,833
Ensembl chr14:43,144,257...43,184,238 		JBrowse link
G Klhl6 kelch-like family member 6 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:94,475,262...94,514,653
Ensembl chr11:80,970,917...81,009,677 		JBrowse link
G Klhl7 kelch-like family member 7 part_of ISO
IEA
IBA
ISS		 (PMID:21828050)
GO_REF:0000002
GO_REF:0000107
GO_REF:0000033
GO_REF:0000024		 RGD
InterPro
Ensembl
GO_Central
UniProt		 PMID:21828050 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:11,898,766...11,947,796
Ensembl chr 4:11,006,375...11,055,541 		JBrowse link
G Klhl8 kelch-like family member 8 part_of ISO
IBA		 (PMID:19158078)
GO_REF:0000033		 RGD
GO_Central		 PMID:19158078 GO_REF:0000033 NCBI chr14:6,112,472...6,158,001
Ensembl chr14:5,807,907...5,853,294 		JBrowse link
G Klhl9 kelch-like family member 9 part_of ISO
IBA		 (PMID:17543862)
GO_REF:0000033		 RGD
GO_Central		 PMID:17543862 GO_REF:0000033 NCBI chr 5:103,333,747...103,337,931 JBrowse link
G Lztr1 leucine zipper like post translational regulator 1 part_of ISO
IEA		 (PMID:30442762), (PMID:30442766)
GO_REF:0000107		 RGD
Ensembl		 PMID:30442762 PMID:30442766 GO_REF:0000107 NCBI chr11:83,487,717...83,503,896
Ensembl chr11:83,487,717...83,503,633 		JBrowse link
G Pdcd6 programmed cell death 6 part_of ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:27716508)		 UniProt
Ensembl
RGD		 PMID:27716508 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:30,795,105...30,810,771
Ensembl chr 1:28,966,518...28,982,189 		JBrowse link
G Pef1 penta-EF hand domain containing 1 part_of ISO
IEA
ISS		 (PMID:27716508)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:27716508 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:147,735,973...147,759,239
Ensembl chr 5:142,451,778...142,475,067 		JBrowse link
G Rbx1 ring-box 1 part_of IEA
ISO		 GO_REF:0000107
(PMID:14528312), (PMID:15983046), (PMID:17543862), (PMID:20389280), (PMID:22358839), (PMID:35687106), (PMID:38225631), (PMID:39504960), (PMID:39667934)		 Ensembl
RGD		 PMID:14528312 PMID:15983046 PMID:17543862 PMID:20389280 PMID:22358839 More... GO_REF:0000107 NCBI chr 7:114,870,893...114,881,194
Ensembl chr 7:112,990,835...113,001,051 		JBrowse link
G Spop speckle type BTB/POZ protein part_of ISO (PMID:14528312), (PMID:22085717) RGD PMID:14528312 PMID:22085717 NCBI chr10:80,854,890...80,935,781
Ensembl chr10:80,358,124...80,483,955 		JBrowse link
G Spopl speckle type BTB/POZ protein like part_of ISO
IEA		 (PMID:22632832)
GO_REF:0000107		 RGD
Ensembl		 PMID:22632832 GO_REF:0000107 NCBI chr 3:6,074,681...6,148,508
Ensembl chr 3:6,078,310...6,108,794 		JBrowse link
G Tnfaip1 TNF alpha induced protein 1 part_of ISO
IEA
IBA
ISS		 (PMID:19782033)
GO_REF:0000107
GO_REF:0000033
GO_REF:0000024		 RGD
Ensembl
GO_Central
UniProt		 PMID:19782033 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr10:63,915,824...63,930,514
Ensembl chr10:63,417,775...63,432,466 		JBrowse link
G Zswim8 zinc finger, SWIM-type containing 8 part_of ISO (PMID:33184234) RGD PMID:33184234 NCBI chr15:3,623,040...3,638,748
Ensembl chr15:3,573,780...3,589,487 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21364
    protein-containing complex 6830
      intracellular protein-containing complex 1035
        ubiquitin ligase complex 401
          cullin-RING ubiquitin ligase complex 253
            Cul3-RING ubiquitin ligase complex 61
Path 2
Term Annotations click to browse term
  cellular_component 21364
    protein-containing complex 6830
      catalytic complex 1960
        transferase complex 989
          ubiquitin ligase complex 401
            cullin-RING ubiquitin ligase complex 253
              Cul3-RING ubiquitin ligase complex 61
paths to the root