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ONTOLOGY REPORT - ANNOTATIONS

Term:cortical cytoskeleton
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Accession:GO:0030863 term browser browse the term
Definition:The portion of the cytoskeleton that lies just beneath the plasma membrane.


show annotations for term's descendants           Sort by:
cortical cytoskeleton term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G 4933400A11Rik similar to RIKEN cDNA 4933400A11 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr  X:27,950,539...27,955,623 JBrowse link
G Actb actin, beta located_in IEA
ISO 		GO_REF:0000107
(PMID:18723693) 		Ensembl
RGD		 PMID:18723693 GO_REF:0000107 NCBI chr12:16,776,664...16,779,634
Ensembl chr12:16,776,661...16,780,242 		JBrowse link
G Actn4 actinin alpha 4 located_in ISO (PMID:12960352) RGD PMID:12960352 NCBI chr 1:93,310,294...93,379,369
Ensembl chr 1:93,310,278...93,379,320 		JBrowse link
G Ank1 ankyrin 1 located_in ISO (PMID:18723693) RGD PMID:18723693 NCBI chr16:75,578,824...75,757,464
Ensembl chr16:75,578,824...75,757,464 		JBrowse link
G Arpc5 actin related protein 2/3 complex, subunit 5 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:67,454,379...67,463,288
Ensembl chr13:67,437,027...67,463,283 		JBrowse link
G Arpc5l actin related protein 2/3 complex, subunit 5-like is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:43,169,518...43,177,224
Ensembl chr 3:43,169,462...43,177,240
Ensembl chr 9:43,169,462...43,177,240 		JBrowse link
G Arpc5l-ps1 actin related protein 2/3 complex, subunit 5-like, pseudogene 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:52,755,471...52,756,468
Ensembl chr 9:52,754,287...52,756,633 		JBrowse link
G Capza1 capping actin protein of muscle Z-line subunit alpha 1 is_active_in
located_in 		IBA
ISO 		GO_REF:0000033
(PMID:18723693) 		GO_Central
RGD		 PMID:18723693 GO_REF:0000033 NCBI chr 2:195,008,035...195,053,100
Ensembl chr 2:195,008,039...195,053,100 		JBrowse link
G Capza2 capping actin protein of muscle Z-line subunit alpha 2 is_active_in
located_in 		IBA
ISO 		GO_REF:0000033
(PMID:18723693) 		GO_Central
RGD		 PMID:18723693 GO_REF:0000033 NCBI chr 4:46,944,040...46,979,930
Ensembl chr 4:46,895,701...46,979,938 		JBrowse link
G Capza3 capping actin protein of muscle Z-line subunit alpha 3 located_in
is_active_in 		IEA
ISO
IBA 		GO_REF:0000107
(PMID:18723693)
GO_REF:0000033 		Ensembl
RGD
GO_Central		 PMID:18723693 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:174,660,446...174,661,659
Ensembl chr 4:174,659,693...174,665,846 		JBrowse link
G Capzb capping actin protein of muscle Z-line subunit beta located_in ISO (PMID:18723693) RGD PMID:18723693 NCBI chr 5:156,718,619...156,818,623
Ensembl chr 5:156,650,432...156,818,619 		JBrowse link
G Cttn cortactin located_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:12151401) 		UniProt
Ensembl
RGD		 PMID:12151401 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:209,029,048...209,064,577
Ensembl chr 1:209,029,048...209,058,211 		JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 located_in ISO
IEA 		(PMID:12151521)
GO_REF:0000107 		RGD
Ensembl		 PMID:12151521 GO_REF:0000107 NCBI chr10:55,239,397...55,267,780
Ensembl chr10:55,236,869...55,265,839 		JBrowse link
G Dmtn dematin actin binding protein located_in IEA
ISO 		GO_REF:0000107
(PMID:18723693) 		Ensembl
RGD		 PMID:18723693 GO_REF:0000107 NCBI chr15:52,087,667...52,111,956
Ensembl chr15:52,087,667...52,112,128 		JBrowse link
G Epb41 erythrocyte membrane protein band 4.1 located_in ISO (PMID:16254212)
(PMID:18723693) 		RGD PMID:16254212 PMID:18723693 NCBI chr 5:149,394,080...149,548,178
Ensembl chr 5:149,394,096...149,543,540 		JBrowse link
G Epb42 erythrocyte membrane protein band 4.2 located_in IEA
ISO 		GO_REF:0000107
(PMID:18723693) 		Ensembl
RGD		 PMID:18723693 GO_REF:0000107 NCBI chr 3:128,433,460...128,451,683
Ensembl chr 3:128,433,464...128,451,683 		JBrowse link
G Flna filamin A IDA RGD PMID:15661894 RGD:2312435 NCBI chr  X:157,159,051...157,185,559
Ensembl chr  X:157,159,051...157,182,343 		JBrowse link
G Gypc glycophorin C located_in
is_active_in 		ISO
IBA 		(PMID:16669616)
(PMID:18723693)
GO_REF:0000033 		RGD
GO_Central		 PMID:16669616 PMID:18723693 GO_REF:0000033 NCBI chr18:24,434,921...24,467,592
Ensembl chr18:24,434,922...24,440,053 		JBrowse link
G Inpp5d inositol polyphosphate-5-phosphatase D IDA RGD PMID:15661894 RGD:2312435 NCBI chr 9:95,735,533...95,840,584
Ensembl chr 9:95,735,530...95,840,589 		JBrowse link
G Mpp1 MAGUK p55 scaffold protein 1 located_in ISO (PMID:18723693) RGD PMID:18723693
G Myh9 myosin, heavy chain 9 located_in IEA
ISO 		GO_REF:0000107
(PMID:12893741) 		Ensembl
RGD		 PMID:12893741 GO_REF:0000107 NCBI chr 7:111,224,291...111,304,963
Ensembl chr 7:111,224,291...111,304,963 		JBrowse link
G Nos2 nitric oxide synthase 2 located_in ISO (PMID:12960352) RGD PMID:12960352 NCBI chr10:64,313,335...64,349,221
Ensembl chr10:64,313,335...64,401,880 		JBrowse link
G Nsmf NMDA receptor synaptonuclear signaling and neuronal migration factor located_in IDA PMID:18303947 UniProt PMID:18303947 RGD:8553324 NCBI chr 3:28,260,018...28,268,790
Ensembl chr 3:28,260,004...28,268,789 		JBrowse link
G Sele selectin E located_in ISO (PMID:8609175) RGD PMID:8609175 NCBI chr13:78,935,997...78,945,905
Ensembl chr13:78,936,036...78,945,903 		JBrowse link
G Slc4a1 solute carrier family 4 member 1 (Diego blood group) located_in ISO
IEA
ISS 		(PMID:16669616)
(PMID:18723693)
GO_REF:0000107
GO_REF:0000024 		RGD
Ensembl
UniProt		 PMID:16669616 PMID:18723693 GO_REF:0000024 GO_REF:0000107 NCBI chr10:87,807,010...87,823,274
Ensembl chr10:87,807,013...87,823,258 		JBrowse link
G Spta1 spectrin, alpha, erythrocytic 1 located_in IEA
ISO 		GO_REF:0000107
(PMID:18723693) 		Ensembl
RGD		 PMID:18723693 GO_REF:0000107 NCBI chr13:88,735,833...88,811,697
Ensembl chr13:88,735,833...88,811,697 		JBrowse link
G Sptan1 spectrin, alpha, non-erythrocytic 1 located_in ISO (PMID:18723693) RGD PMID:18723693 NCBI chr 3:33,639,020...33,703,890
Ensembl chr 3:33,607,210...33,703,889 		JBrowse link
G Sptb spectrin, beta, erythrocytic located_in IEA
ISO 		GO_REF:0000117
(PMID:18723693) 		UniProt
RGD		 PMID:18723693 GO_REF:0000117 NCBI chr 6:101,043,512...101,170,389
Ensembl chr 6:101,045,216...101,170,278 		JBrowse link
G Sptbn1 spectrin, beta, non-erythrocytic 1 located_in IEA
ISO 		GO_REF:0000107
(PMID:18723693) 		Ensembl
RGD		 PMID:18723693 GO_REF:0000107 NCBI chr14:108,042,629...108,217,884
Ensembl chr14:108,042,629...108,217,836 		JBrowse link
G Sptbn5 spectrin, beta, non-erythrocytic 5 located_in IEA
ISO 		GO_REF:0000107
(PMID:18796539) 		Ensembl
RGD		 PMID:18796539 GO_REF:0000107 NCBI chr 3:127,467,137...127,511,814
Ensembl chr 3:127,466,932...127,508,860 		JBrowse link
G Tmod1 tropomodulin 1 located_in IEA
ISO 		GO_REF:0000107
(PMID:18723693) 		Ensembl
RGD		 PMID:18723693 GO_REF:0000107 NCBI chr 5:65,112,062...65,189,563
Ensembl chr 5:65,134,132...65,189,561 		JBrowse link
G Tpm3 tropomyosin 3 located_in ISO (PMID:16765662), (PMID:9473354) RGD PMID:9473354 PMID:16765662 NCBI chr 2:177,812,534...177,842,661
Ensembl chr 2:177,814,883...177,842,660 		JBrowse link
G Tpm4 tropomyosin 4 located_in IEA
ISO 		GO_REF:0000107
(PMID:16765662) 		Ensembl
RGD		 PMID:16765662 GO_REF:0000107 NCBI chr16:17,718,442...17,732,483
Ensembl chr16:17,717,230...17,732,494 		JBrowse link
G Trpc4 transient receptor potential cation channel, subfamily C, member 4 located_in ISO
IEA 		(PMID:16254212)
GO_REF:0000107 		RGD
Ensembl		 PMID:16254212 GO_REF:0000107 NCBI chr 2:140,457,841...140,629,556
Ensembl chr 2:140,458,296...140,626,969 		JBrowse link
actin cap term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr2 actin related protein 2 located_in IEA
ISO 		GO_REF:0000107
(PMID:21494665), (PMID:21874009) 		Ensembl
RGD		 PMID:21494665 PMID:21874009 GO_REF:0000107 NCBI chr14:98,500,119...98,535,092
Ensembl chr14:98,500,138...98,541,998 		JBrowse link
G Cald1 caldesmon 1 located_in IEA
ISO 		GO_REF:0000107
(PMID:2909534) 		Ensembl
RGD		 PMID:2909534 GO_REF:0000107 NCBI chr 4:64,232,906...64,414,085
Ensembl chr 4:64,233,171...64,414,085 		JBrowse link
G Gsn gelsolin located_in ISO
IEA 		(PMID:23575248)
GO_REF:0000107 		RGD
Ensembl		 PMID:23575248 GO_REF:0000107 NCBI chr 3:38,982,605...39,035,849
Ensembl chr 3:38,982,671...39,035,850 		JBrowse link
G Wasl WASP like actin nucleation promoting factor located_in ISO (PMID:21874009) RGD PMID:21874009 NCBI chr 4:54,049,081...54,097,653
Ensembl chr 4:54,049,082...54,097,570 		JBrowse link
actomyosin contractile ring term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anln anillin, actin binding protein located_in
is_active_in 		ISO
IBA 		(PMID:10931866)
GO_REF:0000033 		RGD
GO_Central		 PMID:10931866 GO_REF:0000033 NCBI chr 8:29,134,222...29,197,513
Ensembl chr 8:29,134,222...29,197,513 		JBrowse link
G Anlnl1 anillin, actin binding protein-like 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:62,677,061...62,681,168
Ensembl chr17:62,678,232...62,681,718 		JBrowse link
G Maea macrophage erythroblast attacher, E3 ubiquitin ligase located_in ISO
IEA 		(PMID:16510120)
GO_REF:0000107 		RGD
Ensembl		 PMID:16510120 GO_REF:0000107 NCBI chr14:81,581,784...81,615,246
Ensembl chr14:81,581,785...81,615,202 		JBrowse link
G Myh2 myosin heavy chain 2 located_in IEA
ISO 		GO_REF:0000107
(PMID:15548599) 		Ensembl
RGD		 PMID:15548599 GO_REF:0000107 NCBI chr10:52,355,739...52,382,235
Ensembl chr10:52,355,739...52,382,235 		JBrowse link
G Myh9 myosin, heavy chain 9 located_in ISO
ISS 		(PMID:11029059)
GO_REF:0000024 		RGD
UniProt		 PMID:11029059 GO_REF:0000024 NCBI chr 7:111,224,291...111,304,963
Ensembl chr 7:111,224,291...111,304,963 		JBrowse link
G Pstpip1 proline-serine-threonine phosphatase-interacting protein 1 located_in ISO (PMID:9265651) RGD PMID:9265651 NCBI chr 8:65,395,328...65,434,616
Ensembl chr 8:65,395,358...65,434,627 		JBrowse link
G Rtkn rhotekin is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:117,198,496...117,215,660
Ensembl chr 4:117,198,647...117,215,660 		JBrowse link
cortical actin cytoskeleton term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn1 actinin, alpha 1 located_in
is_active_in 		IDA
IBA 		GO_REF:0000033 GO_Central
RGD		 PMID:15505042 GO_REF:0000033, RGD:1359754 NCBI chr 6:104,731,485...104,826,312
Ensembl chr 6:104,731,485...104,826,172 		JBrowse link
G Actn2 actinin alpha 2 located_in
is_active_in 		IDA
IBA 		GO_REF:0000033 GO_Central
RGD		 PMID:15505042 GO_REF:0000033, RGD:1359754 NCBI chr17:62,835,055...62,902,331
Ensembl chr17:62,812,988...62,903,552 		JBrowse link
G Actn3 actinin alpha 3 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:211,588,473...211,604,401
Ensembl chr 1:211,588,474...211,604,401 		JBrowse link
G Actn4 actinin alpha 4 is_active_in
located_in 		IBA
ISO 		GO_REF:0000033
(PMID:16837921) 		GO_Central
RGD		 PMID:16837921 GO_REF:0000033 NCBI chr 1:93,310,294...93,379,369
Ensembl chr 1:93,310,278...93,379,320 		JBrowse link
G Akap13 A-kinase anchoring protein 13 located_in IEA
ISO
ISS 		GO_REF:0000107
(PMID:11546812)
GO_REF:0000024 		Ensembl
RGD
UniProt		 PMID:11546812 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:138,722,445...139,029,401
Ensembl chr 1:138,724,150...139,029,401 		JBrowse link
G Cap1 cyclase associated actin cytoskeleton regulatory protein 1 located_in IEA
ISO 		GO_REF:0000107
(PMID:15004221) 		Ensembl
RGD		 PMID:15004221 GO_REF:0000107 NCBI chr 5:140,427,265...140,507,678
Ensembl chr 5:140,427,269...140,453,470 		JBrowse link
G Cdh1 cadherin 1 located_in ISO
IEA 		(PMID:24046456)
GO_REF:0000107 		RGD
Ensembl		 PMID:24046456 GO_REF:0000107 NCBI chr19:51,402,178...51,471,572
Ensembl chr19:51,402,034...51,471,565 		JBrowse link
G Cdh2 cadherin 2 located_in IEA
ISO 		GO_REF:0000107
(PMID:24046456) 		Ensembl
RGD		 PMID:24046456 GO_REF:0000107 NCBI chr18:8,051,097...8,265,288
Ensembl chr18:8,051,097...8,265,288 		JBrowse link
G Cfl1 cofilin 1 located_in IEA
ISO 		GO_REF:0000107
(PMID:15004221), (PMID:15548599) 		Ensembl
RGD		 PMID:15004221 PMID:15548599 GO_REF:0000107 NCBI chr 1:212,227,124...212,230,656
Ensembl chr 1:212,226,121...212,231,353 		JBrowse link
G Cldn5 claudin 5 located_in ISO
IEA 		(PMID:25816133)
GO_REF:0000107 		RGD
Ensembl		 PMID:25816133 GO_REF:0000107 NCBI chr11:95,717,172...95,718,598
Ensembl chr11:95,717,176...95,719,322 		JBrowse link
G Coro1a coronin 1A located_in ISO
IEA 		(PMID:15800061), (PMID:24760828)
GO_REF:0000107 		RGD
Ensembl		 PMID:15800061 PMID:24760828 GO_REF:0000107 NCBI chr 1:190,726,129...190,731,133
Ensembl chr 1:190,726,130...190,731,102 		JBrowse link
G Cotl1 coactosin-like F-actin binding protein 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:64,780,309...64,814,629
Ensembl chr19:64,780,322...64,814,840 		JBrowse link
G Cttn cortactin is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:209,029,048...209,064,577
Ensembl chr 1:209,029,048...209,058,211 		JBrowse link
G Dbn1 drebrin 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:9,155,729...9,170,121
Ensembl chr17:9,155,787...9,170,122 		JBrowse link
G Dbnl drebrin-like is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:84,880,085...84,895,122
Ensembl chr14:84,880,142...84,897,133 		JBrowse link
G Dlc1 DLC1 Rho GTPase activating protein located_in ISO
IEA 		(PMID:19158340)
GO_REF:0000107 		RGD
Ensembl		 PMID:19158340 GO_REF:0000107 NCBI chr16:61,954,177...62,374,819
Ensembl chr16:61,995,001...62,374,819 		JBrowse link
G Dstn destrin, actin depolymerizing factor located_in ISO (PMID:15548599) RGD PMID:15548599 NCBI chr 3:151,737,711...151,764,752
Ensembl chr 3:151,737,849...151,764,769 		JBrowse link
G Eef1a1 eukaryotic translation elongation factor 1 alpha 1 located_in ISO (PMID:19158340) RGD PMID:19158340 NCBI chr 8:88,221,839...88,225,688
Ensembl chr 8:88,221,843...88,225,072 		JBrowse link
G Flot1 flotillin 1 located_in ISO
IEA 		(PMID:24046456)
GO_REF:0000107 		RGD
Ensembl		 PMID:24046456 GO_REF:0000107 NCBI chr20:2,922,662...2,932,906
Ensembl chr20:2,922,655...2,932,771 		JBrowse link
G Flot2 flotillin 2 located_in IEA
ISO 		GO_REF:0000107
(PMID:24046456) 		Ensembl
RGD		 PMID:24046456 GO_REF:0000107 NCBI chr10:63,424,084...63,445,811
Ensembl chr10:63,423,806...63,445,810 		JBrowse link
G Gmfb glia maturation factor, beta is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:22,549,705...22,560,125
Ensembl chr15:22,547,034...22,560,308 		JBrowse link
G Gmfg glia maturation factor, gamma is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:92,856,154...92,866,722
Ensembl chr 1:92,854,995...92,866,723 		JBrowse link
G Gsn gelsolin located_in IEA
ISO 		GO_REF:0000107
(PMID:23575248) 		Ensembl
RGD		 PMID:23575248 GO_REF:0000107 NCBI chr 3:38,982,605...39,035,849
Ensembl chr 3:38,982,671...39,035,850 		JBrowse link
G Gys2 glycogen synthase 2 located_in IDA PMID:9003423 UniProt PMID:9003423 RGD:8553883 NCBI chr 4:177,096,063...177,137,236
Ensembl chr 4:177,096,063...177,137,236 		JBrowse link
G Hcls1 hematopoietic cell specific Lyn substrate 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:77,322,873...77,346,333
Ensembl chr11:77,322,873...77,346,387 		JBrowse link
G Hip1 huntingtin interacting protein 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:26,769,868...26,904,367
Ensembl chr12:26,769,961...26,904,296 		JBrowse link
G Hip1r huntingtin interacting protein 1 related is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:38,251,085...38,279,756
Ensembl chr12:38,251,086...38,279,654 		JBrowse link
G Iqgap1 IQ motif containing GTPase activating protein 1 located_in IEA
ISO 		GO_REF:0000107
PR:P46940 (PMID:28089576) 		Ensembl
RGD		 PMID:28089576 GO_REF:0000107 NCBI chr 1:144,088,788...144,178,989
Ensembl chr 1:144,088,793...144,179,043 		JBrowse link
G Lancl2 LanC like glutathione S-transferase 2 located_in ISO (PMID:16979580) RGD PMID:16979580 NCBI chr 4:88,771,974...88,813,920
Ensembl chr 4:88,773,437...88,832,899 		JBrowse link
G Lasp1 LIM and SH3 protein 1 located_in IDA PMID:10806114 UniProt PMID:10806114 RGD:8553950 NCBI chr10:83,290,820...83,331,989
Ensembl chr10:83,290,865...83,331,988 		JBrowse link
G Llgl1 LLGL scribble cell polarity complex component 1 located_in
is_active_in 		ISO
IBA
IEA 		(PMID:7542763)
GO_REF:0000033
GO_REF:0000107 		RGD
GO_Central
Ensembl		 PMID:7542763 GO_REF:0000033 GO_REF:0000107 NCBI chr10:45,878,936...45,893,609
Ensembl chr10:45,879,012...45,893,603 		JBrowse link
G Llgl2 LLGL scribble cell polarity complex component 2 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:101,549,911...101,585,466
Ensembl chr10:101,549,862...101,585,464 		JBrowse link
G Med28 mediator complex subunit 28 located_in IEA
ISO 		GO_REF:0000107
(PMID:15467741) 		Ensembl
RGD		 PMID:15467741 GO_REF:0000107 NCBI chr14:69,807,319...69,816,115
Ensembl chr14:69,807,319...69,816,115 		JBrowse link
G Misp mitotic spindle positioning located_in ISO
IEA 		(PMID:23509069)
GO_REF:0000107 		RGD
Ensembl		 PMID:23509069 GO_REF:0000107 NCBI chr 7:10,526,980...10,537,159
Ensembl chr 7:10,503,209...10,537,159 		JBrowse link
G Mlph melanophilin located_in ISO (PMID:16247022) RGD PMID:16247022 NCBI chr 9:98,955,036...98,990,566
Ensembl chr 9:98,955,141...98,990,556 		JBrowse link
G Mtss2 MTSS I-BAR domain containing 2 located_in IEA
ISO 		GO_REF:0000107
(PMID:18413296) 		Ensembl
RGD		 PMID:18413296 GO_REF:0000107 NCBI chr19:55,602,180...55,623,955
Ensembl chr19:55,602,498...55,623,950 		JBrowse link
G Myadm myeloid-associated differentiation marker located_in ISO
IEA 		(PMID:21325632), (PMID:23264465)
GO_REF:0000107 		RGD
Ensembl		 PMID:21325632 PMID:23264465 GO_REF:0000107 NCBI chr 1:74,779,616...74,796,752
Ensembl chr 1:74,775,698...74,789,710 		JBrowse link
G Myo1a myosin IA located_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:8692943) 		UniProt
Ensembl
RGD		 PMID:8692943 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:65,424,206...65,443,227
Ensembl chr 7:65,428,258...65,443,213 		JBrowse link
G Myo1f myosin IF located_in ISO (PMID:17023661) RGD PMID:17023661 NCBI chr 7:15,065,530...15,116,087
Ensembl chr 7:15,065,530...15,116,087 		JBrowse link
G Myrip myosin VIIA and Rab interacting protein is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:128,895,371...129,062,420
Ensembl chr 8:128,895,371...129,062,420 		JBrowse link
G Myzap myocardial zonula adherens protein located_in ISS
ISO 		GO_REF:0000024
(PMID:20093627) 		UniProt
RGD		 PMID:20093627 GO_REF:0000024 NCBI chr 8:81,036,599...81,123,933
Ensembl chr 8:81,036,601...81,123,810 		JBrowse link
G Nf2 NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor located_in IEA
ISO 		GO_REF:0000107
(PMID:15467741) 		Ensembl
RGD		 PMID:15467741 GO_REF:0000107 NCBI chr14:83,850,894...83,934,263
Ensembl chr14:83,850,894...83,934,151 		JBrowse link
G Pdlim2 PDZ and LIM domain 2 located_in IDA RGD PMID:15505042 RGD:1359754 NCBI chr15:51,647,195...51,659,904
Ensembl chr15:51,647,197...51,658,958 		JBrowse link
G Pjvk pejvakin located_in IEA
ISO 		GO_REF:0000107
(PMID:28089576) 		Ensembl
RGD		 PMID:28089576 GO_REF:0000107 NCBI chr 3:82,002,106...82,012,273
Ensembl chr 3:82,002,368...82,012,451 		JBrowse link
G Plekhh2 pleckstrin homology, MyTH4 and FERM domain containing H2 located_in IEA
ISO 		GO_REF:0000107
(PMID:22832517) 		Ensembl
RGD		 PMID:22832517 GO_REF:0000107 NCBI chr 6:15,783,179...15,893,479
Ensembl chr 6:15,784,645...15,893,537 		JBrowse link
G Ppp1r9a protein phosphatase 1, regulatory subunit 9A located_in IEA
ISO 		GO_REF:0000107
(PMID:15996550) 		Ensembl
RGD		 PMID:15996550 GO_REF:0000107 NCBI chr 4:33,936,949...34,258,927
Ensembl chr 4:33,988,827...34,258,927 		JBrowse link
G Ppp1r9b protein phosphatase 1, regulatory subunit 9B located_in IEA
ISO 		GO_REF:0000107
(PMID:15996550) 		Ensembl
RGD		 PMID:15996550 GO_REF:0000107 NCBI chr10:80,434,888...80,450,919
Ensembl chr10:80,434,900...80,450,919 		JBrowse link
G Rapgef3 Rap guanine nucleotide exchange factor 3 located_in IEA
ISO
IDA 		GO_REF:0000107
(PMID:21047789) 		Ensembl
RGD		 PMID:21047789 PMID:21047789 GO_REF:0000107, RGD:10054076 NCBI chr 7:130,754,883...130,777,303
Ensembl chr 7:130,754,871...130,777,668 		JBrowse link
G Rdx radixin located_in IDA
ISO
IEA 		PMID:21047789
(PMID:21047789)
GO_REF:0000107 		RGD
Ensembl		 PMID:21047789 PMID:21047789 GO_REF:0000107, RGD:10054076 NCBI chr 8:61,275,792...61,348,260
Ensembl chr 8:61,274,460...61,333,967 		JBrowse link
G Scnn1a sodium channel epithelial 1 subunit alpha IDA RGD PMID:16356937 RGD:1624121 NCBI chr 4:159,809,187...159,832,409
Ensembl chr 4:159,809,170...159,832,405 		JBrowse link
G Shroom1 shroom family member 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:38,121,971...38,134,832
Ensembl chr10:38,122,500...38,132,435 		JBrowse link
G Shroom2 shroom family member 2 located_in
is_active_in 		ISO
IBA 		(PMID:16684770)
GO_REF:0000033 		RGD
GO_Central		 PMID:16684770 GO_REF:0000033 NCBI chr  X:25,308,163...25,480,194
Ensembl chr  X:25,308,163...25,479,385 		JBrowse link
G Shroom3 shroom family member 3 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:15,383,769...15,681,158
Ensembl chr14:15,383,769...15,680,462 		JBrowse link
G Shroom4 shroom family member 4 is_active_in
located_in 		IBA
ISO
IEA 		GO_REF:0000033
(PMID:16684770)
GO_REF:0000107 		GO_Central
RGD
Ensembl		 PMID:16684770 GO_REF:0000033 GO_REF:0000107 NCBI chr  X:18,537,371...18,748,665
Ensembl chr  X:18,540,913...18,748,700 		JBrowse link
G Slc2a1 solute carrier family 2 member 1 located_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:18347014) 		UniProt
Ensembl
RGD		 PMID:18347014 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:138,002,522...138,030,742
Ensembl chr 5:138,002,522...138,030,742 		JBrowse link
G Spta1 spectrin, alpha, erythrocytic 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:88,735,833...88,811,697
Ensembl chr13:88,735,833...88,811,697 		JBrowse link
G Sptan1 spectrin, alpha, non-erythrocytic 1 located_in
is_active_in 		IEA
IBA 		GO_REF:0000117
GO_REF:0000033 		UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000117 NCBI chr 3:33,639,020...33,703,890
Ensembl chr 3:33,607,210...33,703,889 		JBrowse link
G Sptb spectrin, beta, erythrocytic is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:101,043,512...101,170,389
Ensembl chr 6:101,045,216...101,170,278 		JBrowse link
G Sptbn1 spectrin, beta, non-erythrocytic 1 is_active_in
located_in 		IBA
IEA 		GO_REF:0000033
GO_REF:0000117 		GO_Central
UniProt		 GO_REF:0000033 GO_REF:0000117 NCBI chr14:108,042,629...108,217,884
Ensembl chr14:108,042,629...108,217,836 		JBrowse link
G Sptbn2 spectrin, beta, non-erythrocytic 2 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:211,432,373...211,473,016
Ensembl chr 1:211,432,373...211,473,306 		JBrowse link
G Sptbn4 spectrin, beta, non-erythrocytic 4 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:91,778,379...91,865,970
Ensembl chr 1:91,778,380...91,865,049 		JBrowse link
G Sptbn5 spectrin, beta, non-erythrocytic 5 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:127,467,137...127,511,814
Ensembl chr 3:127,466,932...127,508,860 		JBrowse link
G Trpv4 transient receptor potential cation channel, subfamily V, member 4 located_in IDA PMID:20657843 BHF-UCL PMID:20657843 RGD:8553293 NCBI chr12:47,599,161...47,638,143
Ensembl chr12:47,599,035...47,638,143 		JBrowse link
G Utrn utrophin IDA RGD PMID:10760950 RGD:1580541 NCBI chr 1:8,541,061...9,044,487
Ensembl chr 1:8,542,798...9,044,487 		JBrowse link
G Wdr1 WD repeat domain 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:76,470,238...76,504,086
Ensembl chr14:76,470,176...76,504,080 		JBrowse link
cortical microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Numa1 nuclear mitotic apparatus protein 1 located_in ISO
IEA 		(PMID:26765568)
GO_REF:0000107 		RGD
Ensembl		 PMID:26765568 GO_REF:0000107 NCBI chr 1:165,709,893...165,784,848
Ensembl chr 1:165,709,905...165,784,848 		JBrowse link
cortical microtubule cytoskeleton term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clasp1 cytoplasmic linker associated protein 1 located_in ISO (PMID:12837247) RGD PMID:12837247 NCBI chr13:32,046,362...32,267,954
Ensembl chr13:32,046,444...32,267,924 		JBrowse link
G Mapre1 microtubule-associated protein, RP/EB family, member 1 located_in ISO
IEA 		(PMID:15631994)
GO_REF:0000107 		RGD
Ensembl		 PMID:15631994 GO_REF:0000107 NCBI chr 3:162,679,020...162,707,167
Ensembl chr 3:162,673,195...162,711,210 		JBrowse link
cortical microtubule plus-end term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clasp2 cytoplasmic linker associated protein 2 located_in ISO (PMID:24520051) RGD PMID:24520051 NCBI chr 8:122,555,532...122,736,934
Ensembl chr 8:122,555,524...122,737,587 		JBrowse link
G Pde4dip phosphodiesterase 4D interacting protein located_in ISO (PMID:29162697) RGD PMID:29162697 NCBI chr 2:187,982,002...188,178,937
Ensembl chr 2:187,981,878...188,178,869 		JBrowse link
cuticular plate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Calb1 calbindin 1 located_in IDA
IEA 		GO_REF:0000117 UniProt
RGD		 PMID:16120789 GO_REF:0000117, RGD:7175527 NCBI chr 5:34,172,612...34,199,555
Ensembl chr 5:34,172,664...34,200,160 		JBrowse link
G Calb2 calbindin 2 located_in IDA
IEA 		GO_REF:0000117 UniProt
RGD		 PMID:16120789 GO_REF:0000117, RGD:7175527 NCBI chr19:55,023,849...55,050,858
Ensembl chr19:55,023,838...55,057,952 		JBrowse link
G Cib2 calcium and integrin binding family member 2 located_in ISO
ISS 		(PMID:26426422)
GO_REF:0000024 		RGD
UniProt		 PMID:26426422 GO_REF:0000024 NCBI chr 8:63,826,410...63,843,301
Ensembl chr 8:63,826,411...63,843,277 		JBrowse link
G Fchsd1 FCH and double SH3 domains 1 located_in IEA
ISO 		GO_REF:0000107
(PMID:23437151) 		Ensembl
RGD		 PMID:23437151 GO_REF:0000107 NCBI chr18:30,043,466...30,056,326
Ensembl chr18:30,045,106...30,055,673 		JBrowse link
G Kncn kinocilin located_in ISO (PMID:15855039) RGD PMID:15855039 NCBI chr 5:134,600,214...134,603,657
Ensembl chr 5:134,600,214...134,603,657 		JBrowse link
G Myo1e myosin IE IDA RGD PMID:12486594 RGD:1298992 NCBI chr 8:79,768,828...79,961,048
Ensembl chr 8:79,753,596...79,961,045 		JBrowse link
G Ocm oncomodulin IDA RGD PMID:16120789 RGD:7175527 NCBI chr12:15,649,452...15,710,375
Ensembl chr12:15,676,520...15,710,379 		JBrowse link
G Piezo1 piezo-type mechanosensitive ion channel component 1 located_in ISS
ISO 		GO_REF:0000024
(PMID:38228630) 		UniProt
RGD		 PMID:38228630 GO_REF:0000024 NCBI chr19:67,453,120...67,515,347
Ensembl chr19:67,453,122...67,515,037 		JBrowse link
G Piezo2 piezo-type mechanosensitive ion channel component 2 located_in ISO (PMID:38228630) RGD PMID:38228630 NCBI chr18:58,738,734...59,115,252
Ensembl chr18:58,738,740...59,115,215 		JBrowse link
G Pvalb parvalbumin IDA RGD PMID:16120789 RGD:7175527 NCBI chr 7:111,653,820...111,668,469
Ensembl chr 7:111,653,111...111,668,446 		JBrowse link
G Snx9 sorting nexin 9 located_in IEA
ISO 		GO_REF:0000107
(PMID:23437151) 		Ensembl
RGD		 PMID:23437151 GO_REF:0000107 NCBI chr 1:48,827,061...48,915,215
Ensembl chr 1:48,830,053...48,915,214 		JBrowse link
G Spta1 spectrin, alpha, erythrocytic 1 located_in IEA
ISO 		GO_REF:0000107
(PMID:20016102) 		Ensembl
RGD		 PMID:20016102 GO_REF:0000107 NCBI chr13:88,735,833...88,811,697
Ensembl chr13:88,735,833...88,811,697 		JBrowse link
G Sptan1 spectrin, alpha, non-erythrocytic 1 located_in ISO (PMID:18796539) RGD PMID:18796539 NCBI chr 3:33,639,020...33,703,890
Ensembl chr 3:33,607,210...33,703,889 		JBrowse link
G Sptbn1 spectrin, beta, non-erythrocytic 1 located_in IEA
ISO 		GO_REF:0000107
(PMID:18796539) 		Ensembl
RGD		 PMID:18796539 GO_REF:0000107 NCBI chr14:108,042,629...108,217,884
Ensembl chr14:108,042,629...108,217,836 		JBrowse link
G Tmc2 transmembrane channel-like 2 located_in IEA
ISO 		GO_REF:0000107
(PMID:38228630) 		Ensembl
RGD		 PMID:38228630 GO_REF:0000107 NCBI chr 3:137,849,513...137,917,462
Ensembl chr 3:137,849,513...137,917,462 		JBrowse link
G Triobp TRIO and F-actin binding protein located_in ISO (PMID:20510926) RGD PMID:20510926 NCBI chr 7:112,386,371...112,452,130
Ensembl chr 7:112,386,420...112,442,924 		JBrowse link
cytoskeleton of presynaptic active zone term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bsn bassoon (presynaptic cytomatrix protein) located_in
is_active_in 		IDA
IBA
IEA 		PMID:9679147
GO_REF:0000033
GO_REF:0000117 		GO_Central
UniProt
RGD		 PMID:11596050 PMID:9679147 GO_REF:0000033 GO_REF:0000117, RGD:9850129, RGD:69780 NCBI chr 8:117,663,447...117,754,412
Ensembl chr 8:117,670,334...117,754,412 		JBrowse link
G Pclo piccolo (presynaptic cytomatrix protein) located_in
is_active_in 		IDA
IEA
IBA 		GO_REF:0000117
GO_REF:0000033 		UniProt
GO_Central
RGD		 PMID:11596050 GO_REF:0000033 GO_REF:0000117, RGD:9850129 NCBI chr 4:20,646,604...21,005,171
Ensembl chr 4:20,646,604...21,005,111 		JBrowse link
spectrin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prkcb protein kinase C, beta part_of ISO (PMID:10534118) RGD PMID:10534118 NCBI chr 1:186,263,397...186,594,743
Ensembl chr 1:186,263,447...186,594,740 		JBrowse link
G Spta1 spectrin, alpha, erythrocytic 1 part_of IEA
ISO 		GO_REF:0000107
MGI:1856180|MGI:1856181|MGI:1856377|MGI:1858128 (PMID:6234993)
GO_REF:0000117 		Ensembl
RGD
UniProt		 PMID:6234993 GO_REF:0000107 GO_REF:0000117 NCBI chr13:88,735,833...88,811,697
Ensembl chr13:88,735,833...88,811,697 		JBrowse link
G Sptan1 spectrin, alpha, non-erythrocytic 1 TAS RGD PMID:2753883 RGD:631897 NCBI chr 3:33,639,020...33,703,890
Ensembl chr 3:33,607,210...33,703,889 		JBrowse link
G Sptb spectrin, beta, erythrocytic part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:101,043,512...101,170,389
Ensembl chr 6:101,045,216...101,170,278 		JBrowse link
G Sptbn1 spectrin, beta, non-erythrocytic 1 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr14:108,042,629...108,217,884
Ensembl chr14:108,042,629...108,217,836 		JBrowse link
G Sptbn2 spectrin, beta, non-erythrocytic 2 part_of ISO
IEA
TAS 		(PMID:9826670)
GO_REF:0000107
GO_REF:0000002
PMID:9704016 		RGD
Ensembl
InterPro		 PMID:9826670 PMID:9704016 GO_REF:0000002 GO_REF:0000107, RGD:70020 NCBI chr 1:211,432,373...211,473,016
Ensembl chr 1:211,432,373...211,473,306 		JBrowse link
G Sptbn4 spectrin, beta, non-erythrocytic 4 part_of ISO
IEA 		(PMID:11086001)
GO_REF:0000107
GO_REF:0000002 		RGD
Ensembl
InterPro		 PMID:11086001 GO_REF:0000002 GO_REF:0000107 NCBI chr 1:91,778,379...91,865,970
Ensembl chr 1:91,778,380...91,865,049 		JBrowse link
terminal web term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn1 actinin, alpha 1 located_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 6:104,731,485...104,826,312
Ensembl chr 6:104,731,485...104,826,172 		JBrowse link
G Cobl cordon-bleu WH2 repeat protein is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:91,041,721...91,274,272
Ensembl chr14:91,041,721...91,274,257 		JBrowse link
G Hfe homeostatic iron regulator IDA RGD PMID:16208485 RGD:1582698 NCBI chr17:41,841,302...41,849,359
Ensembl chr17:41,841,252...41,851,208 		JBrowse link
G Krt19 keratin 19 located_in IEA
ISO 		GO_REF:0000107
(PMID:19321664) 		Ensembl
RGD		 PMID:19321664 GO_REF:0000107 NCBI chr10:85,576,235...85,580,952
Ensembl chr10:85,576,235...85,580,952 		JBrowse link
G Pls1 plastin 1 located_in IEA
ISO 		GO_REF:0000107
(PMID:19321664) 		Ensembl
RGD		 PMID:19321664 GO_REF:0000107 NCBI chr 8:105,196,312...105,306,252
Ensembl chr 8:105,197,455...105,292,447 		JBrowse link
G Vcl vinculin located_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr15:3,315,069...3,404,891
Ensembl chr15:3,315,069...3,405,163 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 19485
    cellular anatomical structure 19353
      cytoplasm 11910
        cell cortex 353
          cortical cytoskeleton 127
            cortical actin cytoskeleton + 94
            cortical microtubule cytoskeleton + 5
            cytoskeleton of presynaptic active zone + 2
            eisosome filament 0
Path 2
Term Annotations click to browse term
  cellular_component 19485
    cellular anatomical structure 19353
      organelle 13686
        membraneless organelle 5693
          intracellular membraneless organelle 5693
            cytoskeleton 2459
              cortical cytoskeleton 127
                cortical actin cytoskeleton + 94
                cortical microtubule cytoskeleton + 5
                cytoskeleton of presynaptic active zone + 2
                eisosome filament 0
paths to the root