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ONTOLOGY REPORT - ANNOTATIONS


Term:endocytic vesicle membrane
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Accession:GO:0030666 term browser browse the term
Definition:The lipid bilayer surrounding an endocytic vesicle.



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endocytic vesicle membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cubn cubilin IDA RGD PMID:15578272 RGD:2317835 NCBI chr17:76,385,046...76,593,133 JBrowse link
G Dync1li1 dynein cytoplasmic 1 light intermediate chain 1 located_in ISO
IEA
ISS
(PMID:20026645)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:20026645 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:123,254,823...123,288,496 JBrowse link
G Rab11a RAB11a, member RAS oncogene family located_in ISO
ISS
(PMID:20026645)
GO_REF:0000024
RGD
UniProt
PMID:20026645 GO_REF:0000024 NCBI chr 8:74,118,922...74,141,760 JBrowse link
G Rab11fip3 RAB11 family interacting protein 3 located_in ISO (PMID:20026645) RGD PMID:20026645 NCBI chr10:15,507,151...15,591,173 JBrowse link
G Scarb2 scavenger receptor class B, member 2 located_in IEA
ISO
GO_REF:0000107
(PMID:29199275)
Ensembl
RGD
PMID:29199275 GO_REF:0000107 NCBI chr14:15,558,271...15,609,813 JBrowse link
AP-2 adaptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap2a1 adaptor related protein complex 2 subunit alpha 1 part_of ISO
IBA
(PMID:23676497)
GO_REF:0000033
RGD
GO_Central
PMID:23676497 GO_REF:0000033 NCBI chr 1:95,384,306...95,414,170 JBrowse link
G Ap2a2 adaptor related protein complex 2 subunit alpha 2 part_of ISO
IBA
IEA
IMP
(PMID:23676497)
GO_REF:0000033
GO_REF:0000117
PMID:12086608
RGD
GO_Central
UniProt
PMID:23676497 PMID:12086608 GO_REF:0000033 GO_REF:0000117, RGD:12793054 NCBI chr 1:196,652,315...196,725,609 JBrowse link
G Ap2b1 adaptor related protein complex 2 subunit beta 1 part_of ISO (PMID:12086608), (PMID:23676497)
(PMID:23676497)
RGD PMID:12086608 PMID:23676497 NCBI chr10:68,099,397...68,205,023 JBrowse link
G Ap2m1 adaptor related protein complex 2 subunit mu 1 part_of IDA
ISO
IBA
PMID:12086608
(PMID:23676497)
GO_REF:0000033
RGD
GO_Central
PMID:23676497 PMID:12086608 GO_REF:0000033, RGD:12793054 NCBI chr11:93,859,690...93,868,600 JBrowse link
G Ap2s1 adaptor related protein complex 2 subunit sigma 1 part_of IDA
ISO
IEA
(PMID:12086608)
GO_REF:0000107
GO_REF:0000002
PMID:2040623
RGD
Ensembl
InterPro
PMID:12086608 PMID:7593184 PMID:2040623 GO_REF:0000002 GO_REF:0000107, RGD:2306270, RGD:727584 NCBI chr 1:77,417,496...77,428,903 JBrowse link
G Btbd8 BTB domain containing 8 located_in IDA PMID:29262337 UniProt PMID:29262337 RGD:13601995 NCBI chr14:2,265,187...2,338,426 JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 part_of ISO (PMID:17626015) RGD PMID:17626015 NCBI chr 5:124,045,865...124,146,221 JBrowse link
G Sgip1 SH3GL interacting endocytic adaptor 1 part_of ISS
ISO
IEA
PMID:17626015
(PMID:17626015)
GO_REF:0000107
RGD
Ensembl
PMID:17626015 PMID:17626015 GO_REF:0000107, RGD:8554282 NCBI chr 5:117,536,752...117,734,593 JBrowse link
G Slc18a3 solute carrier family 18 member A3 part_of IDA
IBA
GO_REF:0000033 GO_Central
RGD
PMID:14724281 GO_REF:0000033, RGD:2317430 NCBI chr16:7,713,630...7,716,491 JBrowse link
G Ston1 stonin 1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:5,843,186...5,892,557 JBrowse link
G Ston2 stonin 2 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:110,567,485...110,676,376 JBrowse link
G Tbc1d5 TBC1 domain family, member 5 located_in ISO (PMID:24603492) RGD PMID:24603492 NCBI chr 9:3,503,328...4,017,131 JBrowse link
clathrin coat of endocytic vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epn2 epsin 2 IDA RGD PMID:10567358 RGD:708327 NCBI chr10:46,697,238...46,759,128 JBrowse link
clathrin-coated endocytic vesicle membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clta clathrin, light chain A located_in TAS Reactome:R-RNO-177478
Reactome:R-RNO-182041
Reactome Reactome:R-RNO-177478 Reactome:R-RNO-182041 NCBI chr 5:58,244,253...58,263,480 JBrowse link
G Cltc clathrin heavy chain located_in TAS Reactome:R-RNO-177478
Reactome:R-RNO-182041
Reactome Reactome:R-RNO-177478 Reactome:R-RNO-182041 NCBI chr10:72,014,984...72,073,308 JBrowse link
G Tyrp1 tyrosinase-related protein 1 located_in ISO (PMID:19841138) RGD PMID:19841138 NCBI chr 5:100,327,111...100,345,657 JBrowse link
early phagosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Appl2 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 located_in ISO (PMID:27219021) RGD PMID:27219021 NCBI chr 7:20,135,248...20,184,757 JBrowse link
G Mtmr4 myotubularin related protein 4 is_active_in ISO (PMID:31543504) RGD PMID:31543504 NCBI chr10:72,890,665...72,913,598 JBrowse link
G Rab31 RAB31, member RAS oncogene family located_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:25568335)
UniProt
Ensembl
RGD
PMID:25568335 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:105,246,712...105,382,973 JBrowse link
phagocytic vesicle membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07044383.1 located_in IEA GO_REF:0000117 UniProt GO_REF:0000117
G AABR07044397.1 located_in IEA GO_REF:0000117 UniProt GO_REF:0000117
G Anxa3 annexin A3 located_in ISO (PMID:7526843) RGD PMID:7526843 NCBI chr14:13,031,675...13,085,678 JBrowse link
G Clec4e C-type lectin domain family 4, member E located_in
is_active_in
IEA
ISO
ISS
GO_REF:0000107
(PMID:18490740)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:18490740 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:158,292,624...158,298,607 JBrowse link
G Coro1a coronin 1A located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:181,295,561...181,300,566 JBrowse link
G Dmbt1 deleted in malignant brain tumors 1 located_in ISO (PMID:10485905) RGD PMID:10485905 NCBI chr 1:185,617,469...185,696,476 JBrowse link
G Dnm2 dynamin 2 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 8:28,254,344...28,336,297 JBrowse link
G ENSRNOG00000064836 located_in IEA GO_REF:0000117 UniProt GO_REF:0000117
G Hvcn1 hydrogen voltage-gated channel 1 located_in ISO (PMID:24415791) RGD PMID:24415791 NCBI chr12:34,341,673...34,370,010 JBrowse link
G Inpp5b inositol polyphosphate-5-phosphatase B located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 5:136,996,766...137,061,315 JBrowse link
G Irgm immunity-related GTPase M located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:33,233,513...33,241,594 JBrowse link
G Lamp2 lysosomal-associated membrane protein 2 located_in IEA
ISO
GO_REF:0000107
MGI:2446573 (PMID:9670047)
Ensembl
RGD
PMID:9670047 GO_REF:0000107 NCBI chr  X:122,038,734...122,087,745 JBrowse link
G Mpeg1 macrophage expressed 1 is_active_in
located_in
ISS
ISO
IEA
GO_REF:0000024
(PMID:37347855)
GO_REF:0000044
UniProt
RGD
PMID:37347855 GO_REF:0000024 GO_REF:0000044 NCBI chr 1:209,452,176...209,456,692 JBrowse link
G Ocrl OCRL, inositol polyphosphate-5-phosphatase located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr  X:127,089,508...127,140,362 JBrowse link
G Pfpl pore forming protein-like located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:209,412,059...209,415,339 JBrowse link
G Pikfyve phosphoinositide kinase, FYVE-type zinc finger containing located_in ISO (PMID:30612035) RGD PMID:30612035 NCBI chr 9:74,057,488...74,151,610 JBrowse link
G Pip4p1 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1 located_in
is_active_in
ISS
ISO
IBA
IEA
GO_REF:0000024
(PMID:29378918)
GO_REF:0000033
GO_REF:0000044
UniProt
RGD
GO_Central
PMID:29378918 GO_REF:0000024 GO_REF:0000033 GO_REF:0000044 NCBI chr15:24,146,854...24,150,739 JBrowse link
G Pip4p2 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2 located_in
is_active_in
ISS
ISO
IBA
IEA
GO_REF:0000024
(PMID:29378918)
GO_REF:0000033
GO_REF:0000044
UniProt
RGD
GO_Central
PMID:29378918 GO_REF:0000024 GO_REF:0000033 GO_REF:0000044 NCBI chr 5:28,259,821...28,307,225 JBrowse link
G Rab10 RAB10, member RAS oncogene family located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 6:31,974,858...32,039,554 JBrowse link
G Rab11b RAB11B, member RAS oncogene family located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 7:15,223,613...15,236,754 JBrowse link
G Rab11fip1 RAB11 family interacting protein 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr16:71,589,753...71,620,341 JBrowse link
G Rab34 RAB34, member RAS oncogene family located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:63,581,542...63,585,608 JBrowse link
G Rab43 RAB43, member RAS oncogene family located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 4:120,249,650...120,269,174 JBrowse link
G Rab5a RAB5A, member RAS oncogene family located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 9:6,720,057...6,749,456 JBrowse link
G Rab5al1 Rab5a, member RAS oncogene family-like 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr14:68,332,360...68,334,470 JBrowse link
G Rab7a RAB7A, member RAS oncogene family located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 4:120,461,966...120,510,756 JBrowse link
G Rab8a RAB8A, member RAS oncogene family located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr16:17,688,049...17,709,412 JBrowse link
G Rab8b RAB8B, member RAS oncogene family located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 8:76,340,106...76,417,638 JBrowse link
G Rab9a RAB9A, member RAS oncogene family located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr  X:31,610,089...31,632,128 JBrowse link
G Rab9b RAB9B, member RAS oncogene family located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr  X:100,220,897...100,231,591 JBrowse link
G Rapgef1 Rap guanine nucleotide exchange factor 1 IDA RGD PMID:18832707 RGD:9835043 NCBI chr 3:33,296,211...33,414,119 JBrowse link
G RT1-A RT1 class I, locus A located_in IEA GO_REF:0000117 UniProt GO_REF:0000117
G RT1-CE1 RT1 class I, locus 1 located_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr20:3,555,779...3,559,487 JBrowse link
G RT1-CE10 RT1 class I, locus CE10 located_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr20:3,377,284...3,380,301 JBrowse link
G RT1-CE11 RT1 class I, locus CE11 located_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr20:3,355,393...3,358,520 JBrowse link
G RT1-CE12 RT1 class I, locus CE12 located_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr20:3,338,907...3,342,547 JBrowse link
G RT1-CE14 RT1 class I, locus CE14 located_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr20:3,296,654...3,300,795 JBrowse link
G RT1-CE16 RT1 class I, locus CE16 located_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr20:3,261,656...3,265,548 JBrowse link
G RT1-CE2 RT1 class I, locus CE2 located_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr20:3,538,452...3,541,841 JBrowse link
G Rt1-ec3 RT1 class I, locus EC3 located_in IEA GO_REF:0000117 UniProt GO_REF:0000117
G RT1-O1l1 RT1 class Ib, locus O1 like 1 located_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr20:2,624,073...2,658,023 JBrowse link
G RT1-S2 RT1 class Ib, locus S2 located_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr20:2,650,233...2,651,654 JBrowse link
G RT1-T24-4 RT1 class I, locus T24, gene 4 located_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr20:2,684,515...2,747,878 JBrowse link
G Slc11a1 solute carrier family 11 member 1 located_in
is_active_in
ISO
IBA
IEA
(PMID:12070036)
MGI:2446573 (PMID:11067873), (PMID:9034150), (PMID:9271100)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:9034150 PMID:9271100 PMID:11067873 PMID:12070036 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:75,957,193...75,968,115 JBrowse link
G Slc15a2 solute carrier family 15 member 2 is_active_in
located_in
ISO
IEA
(PMID:20406817)
GO_REF:0000107
RGD
Ensembl
PMID:20406817 GO_REF:0000107 NCBI chr11:77,519,565...77,548,609 JBrowse link
G Slc48a1 solute carrier family 48 member 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 7:128,915,136...128,923,929 JBrowse link
G Slc9a9 solute carrier family 9 member A9 located_in ISO (PMID:35716776) RGD PMID:35716776 NCBI chr 8:104,112,279...104,675,944 JBrowse link
G Syt7 synaptotagmin 7 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:207,031,359...207,093,787 JBrowse link
G Tcirg1 T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3 located_in ISO (PMID:19549681) RGD PMID:19549681 NCBI chr 1:210,556,270...210,568,021 JBrowse link
G Tlr2 toll-like receptor 2 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 2:171,499,189...171,504,831 JBrowse link
G Vamp7 vesicle-associated membrane protein 7 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr12:16,728,486...16,764,261 JBrowse link
G Vamp9 vesicle-associated membrane protein 9 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr14:9,644,109...9,681,254 JBrowse link
phagolysosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamp1 lysosomal-associated membrane protein 1 located_in IEA
ISO
GO_REF:0000107
(PMID:23395172)
Ensembl
RGD
PMID:23395172 GO_REF:0000107 NCBI chr16:83,058,131...83,082,843 JBrowse link
G Mpeg1 macrophage expressed 1 is_active_in ISS
ISO
GO_REF:0000024
(PMID:31537793)
UniProt
RGD
PMID:31537793 GO_REF:0000024 NCBI chr 1:209,452,176...209,456,692 JBrowse link
G Slc48a1 solute carrier family 48 member 1 is_active_in ISO (PMID:23395172) RGD PMID:23395172 NCBI chr 7:128,915,136...128,923,929 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21321
    cellular anatomical structure 21026
      cytoplasm 12254
        cytoplasmic vesicle 2065
          endocytic vesicle 226
            endocytic vesicle membrane 77
              clathrin-coated endocytic vesicle membrane + 16
              peribacteroid membrane + 0
              phagocytic vesicle membrane + 56
Path 2
Term Annotations click to browse term
  cellular_component 21321
    cellular anatomical structure 21026
      organelle 14240
        membrane-bounded organelle 12805
          intracellular membrane-bounded organelle 12253
            intracellular vesicle 2074
              cytoplasmic vesicle 2065
                cytoplasmic vesicle membrane 896
                  endocytic vesicle membrane 77
                    clathrin-coated endocytic vesicle membrane + 16
                    peribacteroid membrane + 0
                    phagocytic vesicle membrane + 56
paths to the root