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ONTOLOGY REPORT - ANNOTATIONS


Term:coated vesicle membrane
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Accession:GO:0030662 term browser browse the term
Definition:The lipid bilayer surrounding a coated vesicle.



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coated vesicle membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tepsin TEPSIN, adaptor related protein complex 4 accessory protein located_in IDA
ISO
PMID:22472443
(PMID:22472443)
RGD PMID:22472443 PMID:22472443 RGD:11250428 NCBI chr10:105,373,939...105,381,310 JBrowse link
AP-1 adaptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aftph aftiphilin part_of ISO
IBA
(PMID:15758025)
GO_REF:0000033
RGD
GO_Central
PMID:15758025 GO_REF:0000033 NCBI chr14:99,072,761...99,127,006 JBrowse link
G Ap1g1 adaptor related protein complex 1 subunit gamma 1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:37,744,633...37,831,134 JBrowse link
G Ap1g2 adaptor related protein complex 1 subunit gamma 2 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:28,571,571...28,579,421 JBrowse link
G Ap1s1 adaptor related protein complex 1 subunit sigma 1 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr12:19,625,267...19,635,792 JBrowse link
G Ap1s2 adaptor related protein complex 1 subunit sigma 2 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr  X:34,204,601...34,230,819 JBrowse link
G Ap1s3 adaptor related protein complex 1 subunit sigma 3 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:80,950,402...81,009,889 JBrowse link
G Clba1 clathrin binding box of aftiphilin containing 1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:131,882,866...131,889,662 JBrowse link
G Slc18a3 solute carrier family 18 member A3 part_of IDA
IBA
GO_REF:0000033 GO_Central
RGD
PMID:14724281 GO_REF:0000033, RGD:2317430 NCBI chr16:7,713,630...7,716,491 JBrowse link
AP-2 adaptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap2a1 adaptor related protein complex 2 subunit alpha 1 part_of ISO
IBA
(PMID:23676497)
GO_REF:0000033
RGD
GO_Central
PMID:23676497 GO_REF:0000033 NCBI chr 1:95,384,306...95,414,170 JBrowse link
G Ap2a2 adaptor related protein complex 2 subunit alpha 2 part_of ISO
IBA
IEA
IMP
(PMID:23676497)
GO_REF:0000033
GO_REF:0000117
PMID:12086608
RGD
GO_Central
UniProt
PMID:23676497 PMID:12086608 GO_REF:0000033 GO_REF:0000117, RGD:12793054 NCBI chr 1:196,652,315...196,725,609 JBrowse link
G Ap2b1 adaptor related protein complex 2 subunit beta 1 part_of ISO (PMID:12086608), (PMID:23676497)
(PMID:23676497)
RGD PMID:12086608 PMID:23676497 NCBI chr10:68,099,397...68,205,023 JBrowse link
G Ap2m1 adaptor related protein complex 2 subunit mu 1 part_of IDA
ISO
IBA
PMID:12086608
(PMID:23676497)
GO_REF:0000033
RGD
GO_Central
PMID:23676497 PMID:12086608 GO_REF:0000033, RGD:12793054 NCBI chr11:93,859,690...93,868,600 JBrowse link
G Ap2s1 adaptor related protein complex 2 subunit sigma 1 part_of IDA
ISO
IEA
(PMID:12086608)
GO_REF:0000107
GO_REF:0000002
PMID:2040623
RGD
Ensembl
InterPro
PMID:12086608 PMID:7593184 PMID:2040623 GO_REF:0000002 GO_REF:0000107, RGD:2306270, RGD:727584 NCBI chr 1:77,417,496...77,428,903 JBrowse link
G Btbd8 BTB domain containing 8 located_in IDA PMID:29262337 UniProt PMID:29262337 RGD:13601995 NCBI chr14:2,265,187...2,338,426 JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 part_of ISO (PMID:17626015) RGD PMID:17626015 NCBI chr 5:124,045,865...124,146,221 JBrowse link
G Sgip1 SH3GL interacting endocytic adaptor 1 part_of ISS
ISO
IEA
PMID:17626015
(PMID:17626015)
GO_REF:0000107
RGD
Ensembl
PMID:17626015 PMID:17626015 GO_REF:0000107, RGD:8554282 NCBI chr 5:117,536,752...117,734,593 JBrowse link
G Slc18a3 solute carrier family 18 member A3 part_of IDA
IBA
GO_REF:0000033 GO_Central
RGD
PMID:14724281 GO_REF:0000033, RGD:2317430 NCBI chr16:7,713,630...7,716,491 JBrowse link
G Ston1 stonin 1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:5,843,186...5,892,557 JBrowse link
G Ston2 stonin 2 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:110,567,485...110,676,376 JBrowse link
G Tbc1d5 TBC1 domain family, member 5 located_in ISO (PMID:24603492) RGD PMID:24603492 NCBI chr 9:3,503,328...4,017,131 JBrowse link
clathrin coat of endocytic vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epn2 epsin 2 IDA RGD PMID:10567358 RGD:708327 NCBI chr10:46,697,238...46,759,128 JBrowse link
clathrin coat of trans-Golgi network vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clta clathrin, light chain A part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:58,244,253...58,263,480 JBrowse link
G Cltb clathrin, light chain B part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:10,001,512...10,019,201 JBrowse link
G Cltc clathrin heavy chain part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:72,014,984...72,073,308 JBrowse link
G Dnm1l dynamin 1-like NOT|part_of IDA PMID:9472031 ParkinsonsUK-UCL PMID:9472031 RGD:11535088 NCBI chr11:98,084,049...98,135,663 JBrowse link
G Synrg synergin, gamma part_of IDA
IBA
GO_REF:0000033 GO_Central
RGD
PMID:10477754 GO_REF:0000033, RGD:631945 NCBI chr10:68,848,828...68,931,252 JBrowse link
clathrin vesicle coat term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clint1 clathrin interactor 1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:30,298,618...30,353,185 JBrowse link
G Clta clathrin, light chain A part_of NAS
IBA
GO_REF:0000033 GO_Central
RGD
PMID:3563513 GO_REF:0000033, RGD:70686 NCBI chr 5:58,244,253...58,263,480 JBrowse link
G Cltb clathrin, light chain B part_of NAS
IBA
GO_REF:0000033
PMID:3563513
GO_Central
RGD
PMID:3563513 PMID:3563513 GO_REF:0000033, RGD:70686, RGD:70686 NCBI chr17:10,001,512...10,019,201 JBrowse link
G Epn1 Epsin 1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:68,742,491...68,760,570 JBrowse link
G Epn2 epsin 2 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:46,697,238...46,759,128 JBrowse link
G Epn3 epsin 3 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:79,935,857...79,946,121 JBrowse link
G Mycbpap Mycbp associated protein part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:79,450,319...79,470,977 JBrowse link
G Necap1 NECAP endocytosis associated 1 part_of IEA
ISO
IBA
GO_REF:0000107
(PMID:14555962)
GO_REF:0000033
Ensembl
RGD
GO_Central
PMID:14555962 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:156,103,935...156,119,068 JBrowse link
G Necap2 NECAP endocytosis associated 2 part_of ISS
ISO
IBA
GO_REF:0000024
(PMID:14555962)
GO_REF:0000033
UniProt
RGD
GO_Central
PMID:14555962 GO_REF:0000024 GO_REF:0000033 NCBI chr 5:153,370,338...153,382,753 JBrowse link
clathrin-coated endocytic vesicle membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clta clathrin, light chain A located_in TAS Reactome:R-RNO-177478
Reactome:R-RNO-182041
Reactome Reactome:R-RNO-177478 Reactome:R-RNO-182041 NCBI chr 5:58,244,253...58,263,480 JBrowse link
G Cltc clathrin heavy chain located_in TAS Reactome:R-RNO-177478
Reactome:R-RNO-182041
Reactome Reactome:R-RNO-177478 Reactome:R-RNO-182041 NCBI chr10:72,014,984...72,073,308 JBrowse link
G Tyrp1 tyrosinase-related protein 1 located_in ISO (PMID:19841138) RGD PMID:19841138 NCBI chr 5:100,327,111...100,345,657 JBrowse link
clathrin-coated vesicle membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07030494.1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044
G Adcy8 adenylate cyclase 8 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 7:96,417,310...96,665,911 JBrowse link
G Ap1b1 adaptor related protein complex 1 subunit beta 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr14:79,879,482...79,930,778 JBrowse link
G Ap1m1 adaptor related protein complex 1 subunit mu 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr16:17,620,910...17,636,431 JBrowse link
G Ap1m2 adaptor related protein complex 1 subunit mu 2 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 8:19,838,579...19,856,560 JBrowse link
G Ap3b1 adaptor related protein complex 3 subunit beta 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 2:27,331,241...27,535,683 JBrowse link
G Arc activity-regulated cytoskeleton-associated protein located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 7:108,444,959...108,448,413 JBrowse link
G Atp6ap1 ATPase H+ transporting accessory protein 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr  X:157,231,243...157,238,323 JBrowse link
G Atp6ap2 ATPase H+ transporting accessory protein 2 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr  X:10,183,983...10,210,948 JBrowse link
G Atp6v0a1 ATPase H+ transporting V0 subunit a1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:85,935,802...85,989,901 JBrowse link
G Atp6v0b ATPase H+ transporting V0 subunit B located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 5:131,423,384...131,424,900 JBrowse link
G Atp6v0c ATPase H+ transporting V0 subunit C located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:13,196,204...13,202,580 JBrowse link
G Atp6v0e2 ATPase, H+ transporting V0 subunit e2 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 4:77,484,868...77,488,016 JBrowse link
G Atp6v1a ATPase H+ transporting V1 subunit A located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr11:70,066,800...70,120,603 JBrowse link
G Atp6v1b2 ATPase H+ transporting V1 subunit B2 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr16:20,617,515...20,641,651 JBrowse link
G Atp6v1c1 ATPase H+ transporting V1 subunit C1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 7:71,719,326...71,757,191 JBrowse link
G Atp6v1d ATPase H+ transporting V1 subunit D located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 6:97,656,725...97,672,295 JBrowse link
G Atp6v1e1 ATPase H+ transporting V1 subunit E1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 4:154,022,358...154,044,486 JBrowse link
G Atp6v1f ATPase H+ transporting V1 subunit F located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 4:58,067,666...58,070,628 JBrowse link
G Cemip cell migration inducing hyaluronidase 1 located_in ISS
ISO
GO_REF:0000024
(PMID:24251095)
UniProt
RGD
PMID:24251095 GO_REF:0000024 NCBI chr 1:137,906,921...138,062,430 JBrowse link
G Dab2 DAB adaptor protein 2 IDA RGD PMID:19000037 RGD:7243162 NCBI chr 2:57,241,947...57,294,893 JBrowse link
G Dbnl drebrin-like located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr14:80,666,115...80,681,155 JBrowse link
G Dennd1a DENN domain containing 1A located_in ISO (PMID:17182770), (PMID:20159556) RGD PMID:17182770 PMID:20159556 NCBI chr 3:21,564,749...22,052,057 JBrowse link
G Necap2 NECAP endocytosis associated 2 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 5:153,370,338...153,382,753 JBrowse link
G Reep6 receptor accessory protein 6 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 7:9,373,927...9,380,845 JBrowse link
G Syt11 synaptotagmin 11 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 2:176,503,845...176,530,354 JBrowse link
G Vamp3 vesicle-associated membrane protein 3 IDA RGD PMID:7573412 RGD:4892574 NCBI chr 5:161,498,109...161,508,704 JBrowse link
G Vti1a vesicle transport through interaction with t-SNAREs 1A located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:264,361,538...264,667,171 JBrowse link
COPI vesicle coat term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arcn1 archain 1 part_of IEA
IBA
GO_REF:0000104
GO_REF:0000033
UniProt
GO_Central
GO_REF:0000033 GO_REF:0000104 NCBI chr 8:53,954,401...53,979,005 JBrowse link
G Copa COPI coat complex subunit alpha part_of ISO
IBA
(PMID:14729954)
GO_REF:0000033
RGD
GO_Central
PMID:14729954 GO_REF:0000033 NCBI chr13:84,546,483...84,586,879 JBrowse link
G Copb1 COPI coat complex subunit beta 1 part_of IDA
IBA
PMID:1840503
GO_REF:0000033
GO_Central PMID:1840503 GO_REF:0000033, RGD:632446 NCBI chr 1:168,404,334...168,438,589 JBrowse link
G Copb2 COPI coat complex subunit beta 2 part_of ISO
IBA
IEA
(PMID:14729954), (PMID:8335000)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:8335000 PMID:14729954 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:99,161,324...99,183,452 JBrowse link
G Cope COPI coat complex subunit epsilon part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:19,148,832...19,159,052 JBrowse link
G Copg1 COPI coat complex subunit gamma 1 part_of IEA
IBA
GO_REF:0000002
GO_REF:0000033
InterPro
GO_Central
GO_REF:0000002 GO_REF:0000033 NCBI chr 4:120,366,540...120,392,502 JBrowse link
G Copg2 COPI coat complex subunit gamma 2 part_of ISO
IBA
IEA
(PMID:11056392), (PMID:14729954)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000002
RGD
GO_Central
Ensembl
InterPro
PMID:11056392 PMID:14729954 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:59,366,086...59,501,591 JBrowse link
G Copz1 COPI coat complex subunit zeta 1 part_of ISO
IBA
(PMID:11056392), (PMID:14729954)
GO_REF:0000033
RGD
GO_Central
PMID:11056392 PMID:14729954 GO_REF:0000033 NCBI chr 7:134,409,523...134,435,661 JBrowse link
G Copz2 COPI coat complex subunit zeta 2 part_of ISO
IBA
(PMID:14729954)
GO_REF:0000033
RGD
GO_Central
PMID:14729954 GO_REF:0000033 NCBI chr10:81,832,441...81,845,514 JBrowse link
G Dipk2a divergent protein kinase domain 2A part_of ISO (PMID:18651652) RGD PMID:18651652 NCBI chr 8:95,070,695...95,089,815 JBrowse link
G ENSRNOG00000068070 part_of IEA GO_REF:0000104 UniProt GO_REF:0000104
G Hmces 5-hydroxymethylcytosine binding, ES cell specific part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:120,392,812...120,415,616 JBrowse link
G Scyl1 SCY1 like pseudokinase 1 part_of ISO (PMID:18556652) RGD PMID:18556652 NCBI chr 1:212,475,198...212,489,285 JBrowse link
G Tmed3 transmembrane p24 trafficking protein 3 part_of IDA
IBA
PMID:15718469
GO_REF:0000033
GO_Central PMID:15718469 GO_REF:0000033, RGD:1599272 NCBI chr 8:99,121,361...99,129,653 JBrowse link
COPI-coated vesicle membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07071244.1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044
G Copb2 COPI coat complex subunit beta 2 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 8:99,161,324...99,183,452 JBrowse link
G Golga5 golgin A5 IDA RGD PMID:15718469 RGD:1599272 NCBI chr 6:121,612,389...121,640,552 JBrowse link
G Kdelr1 KDEL endoplasmic reticulum protein retention receptor 1 located_in ISO (PMID:18086916) RGD PMID:18086916 NCBI chr 1:96,347,258...96,358,145 JBrowse link
G Kdelr2 KDEL endoplasmic reticulum protein retention receptor 2 located_in IEA
ISO
ISS
GO_REF:0000044
(PMID:18086916)
GO_REF:0000024
UniProt
RGD
PMID:18086916 GO_REF:0000024 GO_REF:0000044 NCBI chr12:11,138,820...11,157,117 JBrowse link
G Kdelr3 KDEL endoplasmic reticulum protein retention receptor 3 located_in ISO (PMID:18086916) RGD PMID:18086916 NCBI chr 7:112,959,632...112,969,858 JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr12:32,052,542...32,061,628 JBrowse link
G Tmed7 transmembrane p24 trafficking protein 7 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr18:39,318,564...39,325,640 JBrowse link
G Tmem199 transmembrane protein 199 located_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:26833330)
UniProt
Ensembl
RGD
PMID:26833330 GO_REF:0000024 GO_REF:0000107 NCBI chr10:63,402,493...63,407,065 JBrowse link
COPII vesicle coat term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cideb cell death-inducing DFFA-like effector b part_of ISO (PMID:23297397), (PMID:30858281) RGD PMID:23297397 PMID:30858281 NCBI chr15:29,252,208...29,256,482 JBrowse link
G Klhl12 kelch-like family member 12 part_of ISO
IEA
ISS
(PMID:27716508)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:27716508 GO_REF:0000024 GO_REF:0000107 NCBI chr13:45,899,913...45,933,648 JBrowse link
G Pdcd6 programmed cell death 6 part_of ISO
ISS
(PMID:27716508)
GO_REF:0000024
RGD
UniProt
PMID:27716508 GO_REF:0000024 NCBI chr 1:28,966,518...28,982,188 JBrowse link
G Pef1 penta-EF hand domain containing 1 part_of ISO
IEA
ISS
(PMID:27716508)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:27716508 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:142,451,791...142,475,061 JBrowse link
G Sar1a secretion associated, Ras related GTPase 1A part_of
is_active_in
ISO (PMID:17499046)
(PMID:32358066)
RGD PMID:17499046 PMID:32358066 NCBI chr20:30,166,310...30,178,718 JBrowse link
G Sar1b secretion associated, Ras related GTPase 1B is_active_in
part_of
ISS
IBA
ISO
GO_REF:0000024
GO_REF:0000033
(PMID:32358066)
UniProt
GO_Central
RGD
PMID:32358066 GO_REF:0000024 GO_REF:0000033 NCBI chr10:36,525,365...36,555,009 JBrowse link
G Sec13 SEC13 homolog, nuclear pore and COPII coat complex component part_of ISO
IBA
(PMID:17499046)
GO_REF:0000033
RGD
GO_Central
PMID:17499046 GO_REF:0000033 NCBI chr 4:148,433,344...148,446,735 JBrowse link
G Sec13-ps2 SEC13 homolog, nuclear pore and COPII coat complex component, pseudogene 2 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:967,396...968,674 JBrowse link
G Sec23a Sec23 homolog A, COPII coat complex component part_of ISO
IBA
(PMID:17499046)
GO_REF:0000033
RGD
GO_Central
PMID:17499046 GO_REF:0000033 NCBI chr 6:76,658,793...76,706,125 JBrowse link
G Sec23b Sec23 homolog B, COPII coat complex component part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:131,939,011...131,981,489 JBrowse link
G Sec24a SEC24 homolog A, COPII coat complex component part_of ISO
IBA
(PMID:17499046)
GO_REF:0000033
RGD
GO_Central
PMID:17499046 GO_REF:0000033 NCBI chr10:35,946,901...36,024,353 JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component part_of ISO
IBA
(PMID:10075675), (PMID:17499046)
GO_REF:0000033
(PMID:19966784)
RGD
GO_Central
PMID:10075675 PMID:17499046 PMID:19966784 GO_REF:0000033 NCBI chr 2:218,562,670...218,632,753 JBrowse link
G Sec24c SEC24 homolog C, COPII coat complex component part_of ISO
IBA
(PMID:10075675), (PMID:10329445), (PMID:17499046)
GO_REF:0000033
RGD
GO_Central
PMID:10075675 PMID:10329445 PMID:17499046 GO_REF:0000033 NCBI chr15:3,602,460...3,624,524 JBrowse link
G Sec24d SEC24 homolog D, COPII coat complex component part_of ISO
IBA
(PMID:17499046)
GO_REF:0000033
RGD
GO_Central
PMID:17499046 GO_REF:0000033 NCBI chr 2:214,103,138...214,211,155 JBrowse link
G Sec31a SEC31 homolog A, COPII coat complex component part_of ISS
IBA
IEA
ISO
GO_REF:0000024
GO_REF:0000033
GO_REF:0000107
(PMID:17499046), (PMID:27716508)
UniProt
GO_Central
Ensembl
RGD
PMID:17499046 PMID:27716508 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr14:9,518,655...9,573,579 JBrowse link
G Sec31b SEC31 homolog B, COPII coat complex component part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:253,324,081...253,353,779 JBrowse link
cytoplasmic side of trans-Golgi network transport vesicle membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap4b1 adaptor related protein complex 4 subunit beta 1 located_in ISO (PMID:10066790) RGD PMID:10066790 NCBI chr 2:191,318,485...191,330,531 JBrowse link
ER to Golgi transport vesicle membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gosr2 golgi SNAP receptor complex member 2 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:89,085,323...89,105,665 JBrowse link
G Pdcd6 programmed cell death 6 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:28,966,518...28,982,188 JBrowse link
G Scap SREBF chaperone located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 8:119,184,366...119,239,086 JBrowse link
G Sec16a SEC16 homolog A, endoplasmic reticulum export factor is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:29,627,779...29,662,925 JBrowse link
G Sec16b SEC16 homolog B, endoplasmic reticulum export factor is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:69,665,757...69,727,199 JBrowse link
G Sec22b SEC22 homolog B, vesicle trafficking protein located_in
is_active_in
ISO
IBA
(PMID:17499046)
GO_REF:0000033
RGD
GO_Central
PMID:17499046 GO_REF:0000033 NCBI chr 2:185,500,029...185,520,811 JBrowse link
G Sec23a Sec23 homolog A, COPII coat complex component located_in ISO UniProtKB:P15303 (PMID:8898360) RGD PMID:8898360 NCBI chr 6:76,658,793...76,706,125 JBrowse link
G Sec31a SEC31 homolog A, COPII coat complex component located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr14:9,518,655...9,573,579 JBrowse link
G Slc30a5 solute carrier family 30 member 5 located_in ISO (PMID:15525635) RGD PMID:15525635 NCBI chr 2:31,945,745...31,975,969 JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:45,507,152...45,529,164 JBrowse link
G Srebf2 sterol regulatory element binding transcription factor 2 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 7:115,542,774...115,600,945 JBrowse link
G Stx17 syntaxin 17 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 5:62,446,138...62,506,108 JBrowse link
G Tmed7 transmembrane p24 trafficking protein 7 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr18:39,318,564...39,325,640 JBrowse link
G Uso1 USO1 vesicle transport factor located_in
is_active_in
TAS
IBA
Reactome:R-NUL-2422970
GO_REF:0000033
Reactome
GO_Central
GO_REF:0000033 Reactome:R-NUL-2422970 NCBI chr14:15,866,638...15,932,185 JBrowse link
G Vma21 vacuolar ATPase assembly factor VMA21 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr  X:149,491,709...149,501,010 JBrowse link
G Vti1a vesicle transport through interaction with t-SNAREs 1A is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:264,361,538...264,667,171 JBrowse link
G Vti1b vesicle transport through interaction with t-SNAREs 1B is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:97,957,700...97,976,491 JBrowse link
trans-Golgi network transport vesicle membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nrgn neurogranin IDA RGD PMID:8891262 RGD:9835422 NCBI chr 8:37,255,462...37,263,659 JBrowse link
G Rassf9 Ras association domain family member 9 located_in
is_active_in
IDA
IBA
IEA
ISO
PMID:9837933
GO_REF:0000033
GO_REF:0000107
(PMID:9837933)
GO_Central
Ensembl
RGD
PMID:9837933 PMID:9837933 GO_REF:0000033 GO_REF:0000107, RGD:633607 NCBI chr 7:37,599,720...37,631,553 JBrowse link
vesicle coat term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sec31a SEC31 homolog A, COPII coat complex component part_of ISO (PMID:22792322) RGD PMID:22792322 NCBI chr14:9,518,655...9,573,579 JBrowse link
G Sec31b SEC31 homolog B, COPII coat complex component part_of ISO (PMID:22792322) RGD PMID:22792322 NCBI chr 1:253,324,081...253,353,779 JBrowse link
G Tf transferrin part_of ISO (PMID:22792322) RGD PMID:22792322 NCBI chr 8:103,789,780...103,816,487 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21321
    cellular anatomical structure 21026
      cytoplasm 12254
        cytoplasmic vesicle 2065
          coated vesicle 240
            coated vesicle membrane 114
              COPI-coated vesicle membrane + 22
              ER to Golgi transport vesicle membrane + 30
              clathrin-coated vesicle membrane + 62
              vesicle coat + 62
Path 2
Term Annotations click to browse term
  cellular_component 21321
    cellular anatomical structure 21026
      organelle 14240
        membrane-bounded organelle 12805
          intracellular membrane-bounded organelle 12253
            intracellular vesicle 2074
              cytoplasmic vesicle 2065
                cytoplasmic vesicle membrane 896
                  coated vesicle membrane 114
                    COPI-coated vesicle membrane + 22
                    ER to Golgi transport vesicle membrane + 30
                    clathrin-coated vesicle membrane + 62
                    vesicle coat + 62
paths to the root