ONTOLOGY REPORT - ANNOTATIONS
Term: lung development
Accession: GO:0030324
browse the term
Definition: The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the esophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax.
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Aard
alanine and arginine rich domain containing protein
IEP
RGD
PMID:11997109
RGD:1304244
NCBI chr 7:83,364,478...83,369,319
Ensembl chr 7:83,364,204...83,369,317
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Abca3
ATP binding cassette subfamily A member 3
involved_in
ISS ISO
GO_REF:0000024 (PMID:17540762), (PMID:20190032)
UniProt RGD
PMID:17540762 PMID:20190032
GO_REF:0000024
NCBI chr10:13,382,439...13,439,748
Ensembl chr10:13,382,540...13,439,745
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Ace
angiotensin I converting enzyme
IEP
RGD
PMID:7977726
RGD:8158036
NCBI chr10:90,910,316...90,930,437
Ensembl chr10:90,910,316...90,931,131
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Acvr2b
activin A receptor type 2B
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:108051 (PMID:17849440)
Ensembl RGD
PMID:17849440
GO_REF:0000107
NCBI chr 8:119,138,901...119,178,477
Ensembl chr 8:119,138,812...119,170,458
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Ada
adenosine deaminase
acts_upstream_of_or_within
ISO
MGI:2155977 (PMID:7670465)
RGD
PMID:7670465
NCBI chr 3:152,398,745...152,422,854
Ensembl chr 3:152,398,747...152,447,088
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Adamts2
ADAM metallopeptidase with thrombospondin type 1 motif, 2
acts_upstream_of_or_within
ISO
MGI:2388161 (PMID:16556917)
RGD
PMID:16556917
NCBI chr10:34,920,992...35,126,465
Ensembl chr10:34,921,049...35,123,821
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Ager
advanced glycosylation end product-specific receptor
IEP
RGD
PMID:17343756
RGD:1625339
NCBI chr20:4,148,150...4,151,361
Ensembl chr20:4,147,890...4,151,078
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Aldh1a2
aldehyde dehydrogenase 1 family, member A2
acts_upstream_of_or_within
ISO
MGI:1857891 (PMID:16427040), (PMID:16806149)
RGD
PMID:16427040 PMID:16806149
NCBI chr 8:71,877,850...71,957,107
Ensembl chr 8:71,877,850...71,957,107
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Anxa2
annexin A2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:24357721)
Ensembl RGD
PMID:24357721
GO_REF:0000107
NCBI chr 8:70,105,268...70,141,663
Ensembl chr 8:70,105,253...70,141,658
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Ap3b1
adaptor related protein complex 3 subunit beta 1
acts_upstream_of_or_within
ISO
MGI:2177763 (PMID:12777251)
RGD
PMID:12777251
NCBI chr 2:25,600,069...25,800,937
Ensembl chr 2:25,600,040...25,800,935
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Arg1
arginase 1
IEP
RGD
PMID:18192591
RGD:4143284
NCBI chr 1:20,475,878...20,488,422
Ensembl chr 1:20,475,968...20,488,422
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Arg2
arginase 2
IEP
RGD
PMID:18192591
RGD:4143284
NCBI chr 6:97,936,002...97,961,379
Ensembl chr 6:97,936,002...97,961,378
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Asah1
N-acylsphingosine amidohydrolase 1
IDA
RGD
PMID:9160843
RGD:1599262
NCBI chr16:50,966,404...50,997,827
Ensembl chr16:50,966,229...51,008,233
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Bag6
BAG cochaperone 6
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:16287848) GO_REF:0000107
UniProt RGD Ensembl
PMID:16287848
GO_REF:0000024 GO_REF:0000107
NCBI chr20:3,675,938...3,690,414
Ensembl chr20:3,675,938...3,688,657
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Bloc1s6
biogenesis of lysosomal organelles complex 1 subunit 6
acts_upstream_of_or_within
ISO
MGI:1856982 (PMID:16439805)
RGD
PMID:16439805
NCBI chr 3:109,816,397...109,826,528
Ensembl chr 3:109,816,366...109,828,308
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Bmp4
bone morphogenetic protein 4
acts_upstream_of_or_within
ISO
MGI:2181190|MGI:3574949 (PMID:16414041)
RGD
PMID:16414041
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
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Bmpr1a
bone morphogenetic protein receptor type 1A
acts_upstream_of_or_within
ISO
MGI:2158390|MGI:3574949 (PMID:16414041)
RGD
PMID:16414041
NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616
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Casp1
caspase 1
IEP
RGD
PMID:12396474
RGD:5130192
NCBI chr 8:2,587,812...2,597,403
Ensembl chr 8:2,587,831...2,597,383
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Ccbe1
collagen and calcium binding EGF domains 1
acts_upstream_of_or_within
ISO
MGI:5495674 (PMID:24733830)
RGD
PMID:24733830
NCBI chr18:59,579,851...59,823,977
Ensembl chr18:59,580,768...59,824,400
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Ccdc39
coiled-coil domain 39 molecular ruler complex subunit
involved_in
ISO
(PMID:22693285)
RGD
PMID:22693285
NCBI chr 2:116,665,651...116,703,354
Ensembl chr 2:116,665,261...116,703,350
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Ccdc40
coiled-coil domain 40 molecular ruler complex subunit
involved_in
ISO
(PMID:22693285) (PMID:21131974)
RGD
PMID:21131974 PMID:22693285
NCBI chr10:104,486,748...104,527,284
Ensembl chr10:104,486,748...104,527,243
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Ccn2
cellular communication network factor 2
acts_upstream_of_or_within
IEP ISO
MGI:2663631 (PMID:18213577)
RGD
PMID:18213577 PMID:19361631
RGD:2314526
NCBI chr 1:20,802,199...20,805,315
Ensembl chr 1:20,802,199...20,805,734
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Cebpa
CCAAT/enhancer binding protein alpha
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 (PMID:8798745) MGI:2177133|MGI:2445716 (PMID:16467360)
UniProt RGD
PMID:8798745 PMID:16467360
GO_REF:0000024
NCBI chr 1:87,759,631...87,762,303
Ensembl chr 1:87,759,433...87,762,412
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Cftr
CF transmembrane conductance regulator
IMP
RGD
PMID:15694001
RGD:1599597
NCBI chr 4:46,561,269...46,728,759
Ensembl chr 4:46,560,885...46,728,756
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Chi3l1
chitinase 3 like 1
involved_in
ISO IEA ISS
(PMID:18403759) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:18403759
GO_REF:0000024 GO_REF:0000107
NCBI chr13:45,641,802...45,649,787
Ensembl chr13:45,641,802...45,649,787
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Clcn2
chloride voltage-gated channel 2
IMP
RGD
PMID:14711803
RGD:1358647
NCBI chr11:80,197,741...80,211,657
Ensembl chr11:80,198,153...80,211,657
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Col3a1
collagen type III alpha 1 chain
involved_in
ISO
MGI:1860700 (PMID:17960558)
RGD
PMID:17960558
NCBI chr 9:47,374,611...47,410,547
Ensembl chr 9:47,374,593...47,410,547
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Col6a1
collagen type VI alpha 1 chain
acts_upstream_of_or_within
ISO
(PMID:24357721)
RGD
PMID:24357721
NCBI chr20:11,906,105...11,924,599
Ensembl chr20:11,905,957...11,924,597
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Cp
ceruloplasmin
IEP
RGD
PMID:2332446
RGD:728241
NCBI chr 2:102,439,433...102,498,075
Ensembl chr 2:102,439,624...102,498,075
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Crh
corticotropin releasing hormone
acts_upstream_of_or_within
ISO
MGI:1857392 (PMID:10861000)
RGD
PMID:10861000
NCBI chr 2:102,143,055...102,144,919
Ensembl chr 2:102,143,055...102,144,919
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Crispld2
cysteine-rich secretory protein LCCL domain containing 2
IEP
RGD
PMID:10362728
RGD:633294
NCBI chr19:48,053,153...48,111,485
Ensembl chr19:48,053,287...48,110,465
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Ctnnb1
catenin beta 1
acts_upstream_of_or_within
ISO
MGI:2148567|MGI:2148594 (PMID:12885771), (PMID:18231602)
RGD
PMID:12885771 PMID:18231602
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
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Cux1
cut-like homeobox 1
acts_upstream_of_or_within
ISO
MGI:2388352 (PMID:11544187)
RGD
PMID:11544187
NCBI chr12:20,107,062...20,425,868
Ensembl chr12:20,107,311...20,425,866 Ensembl chr 4:20,107,311...20,425,866
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Cyp1a2
cytochrome P450, family 1, subfamily a, polypeptide 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1861917 (PMID:7761462)
Ensembl RGD
PMID:7761462
GO_REF:0000107
NCBI chr 8:58,075,367...58,082,255
Ensembl chr 8:58,075,367...58,082,312
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Dhcr7
7-dehydrocholesterol reductase
acts_upstream_of_or_within
ISO
MGI:2387406 (PMID:15005800)
RGD
PMID:15005800
NCBI chr 1:199,015,081...199,031,055
Ensembl chr 1:199,015,081...199,031,055
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Dicer1
dicer 1 ribonuclease III
acts_upstream_of_or_within
ISO
MGI:3053959|MGI:3589209 (PMID:16452165)
RGD
PMID:16452165
NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
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Dnaaf1
dynein, axonemal, assembly factor 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:19944405)
Ensembl RGD
PMID:19944405
GO_REF:0000107
NCBI chr19:47,624,534...47,652,314
Ensembl chr19:47,624,181...47,652,313
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Egfr
epidermal growth factor receptor
IEP
RGD
PMID:20118217
RGD:5131869
NCBI chr14:91,176,979...91,349,722
Ensembl chr14:91,177,067...91,344,382
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Eif4e
eukaryotic translation initiation factor 4E
IEP
RGD
PMID:18952566
RGD:2307417
NCBI chr 2:227,066,519...227,099,261
Ensembl chr 2:227,066,673...227,098,683
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Eif4ebp1
eukaryotic translation initiation factor 4E binding protein 1
IEP
RGD
PMID:18952566
RGD:2307417
NCBI chr16:64,792,595...64,805,984
Ensembl chr16:64,790,226...64,805,984
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Eif4g1
eukaryotic translation initiation factor 4 gamma 1
IEP
RGD
PMID:15388509
RGD:2307418
NCBI chr11:80,221,919...80,241,958
Ensembl chr11:80,221,919...80,241,941
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Elk1
ETS transcription factor ELK1
acts_upstream_of_or_within
ISO
(PMID:31877385)
RGD
PMID:31877385
NCBI chr X:1,138,826...1,155,713
Ensembl chr X:1,139,756...1,155,713
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Ep300
E1A binding protein p300
acts_upstream_of_or_within
ISO
MGI:2679374 (PMID:14517255)
RGD
PMID:14517255
NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088 Ensembl chr 7:113,106,247...113,136,088
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Epas1
endothelial PAS domain protein 1
involved_in acts_upstream_of_or_within
IEA IEP ISO
GO_REF:0000107 MGI:2663583 (PMID:12053176)
Ensembl RGD
PMID:12053176 PMID:9398602
GO_REF:0000107, RGD:625724
NCBI chr 6:7,790,236...7,871,717
Ensembl chr 6:7,790,647...7,871,228
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Eva1a
eva-1 homolog A, regulator of programmed cell death
acts_upstream_of_or_within
ISO
(PMID:28151473)
RGD
PMID:28151473
NCBI chr 4:114,593,773...114,643,011
Ensembl chr 4:114,593,341...114,643,011
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Fbn1
fibrillin 1
acts_upstream_of_or_within
ISO
MGI:1857348 (PMID:16439805)
RGD
PMID:16439805
NCBI chr 3:112,554,257...112,750,835
Ensembl chr 3:112,554,925...112,750,889
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Fbxw7
F-box and WD repeat domain containing 7
acts_upstream_of_or_within
ISO
MGI:5007620 (PMID:21503901)
RGD
PMID:21503901
NCBI chr 2:170,149,706...170,311,536
Ensembl chr 2:170,149,694...170,309,941
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Fendrr
FOXF1 adjacent non-coding developmental regulatory RNA
involved_in
ISO
MGI:5563522 (PMID:25909911)
RGD
PMID:25909911
NCBI chr19:49,127,225...49,152,780
Ensembl chr19:49,121,214...49,153,240
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Fgf1
fibroblast growth factor 1
acts_upstream_of_or_within
ISO
(PMID:15576401)
RGD
PMID:15576401
NCBI chr18:30,686,555...30,772,667
Ensembl chr18:30,686,581...30,772,357
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Fgf10
fibroblast growth factor 10
acts_upstream_of_or_within
ISO
MGI:1859647|MGI:3629660 (PMID:16375885), (PMID:17560563), (PMID:9428423), (PMID:9916808)
RGD
PMID:9428423 PMID:9916808 PMID:16375885 PMID:17560563
NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866
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Fgf18
fibroblast growth factor 18
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2179607 (PMID:15336546)
Ensembl RGD
PMID:15336546
GO_REF:0000107
NCBI chr10:17,706,011...17,737,702
Ensembl chr10:17,706,174...17,736,818
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Fgf2
fibroblast growth factor 2
acts_upstream_of_or_within
ISO
MGI:98297 (PMID:15576401), (PMID:17187775)
RGD
PMID:15576401 PMID:17187775
NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221
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Fgf7
fibroblast growth factor 7
involved_in
IMP IBA
GO_REF:0000033
GO_Central RGD
PMID:11316745
GO_REF:0000033, RGD:68696
NCBI chr 3:113,280,448...113,333,279
Ensembl chr 3:113,281,283...113,332,929
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Fgf8
fibroblast growth factor 8
acts_upstream_of_or_within
ISO
MGI:1857843 (PMID:10411502)
RGD
PMID:10411502
NCBI chr 1:244,584,477...244,590,578
Ensembl chr 1:244,584,652...244,590,359
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Fgf9
fibroblast growth factor 9
acts_upstream_of_or_within
ISO
MGI:2135961 (PMID:11493531), (PMID:16540513)
RGD
PMID:11493531 PMID:16540513
NCBI chr15:32,208,993...32,254,952
Ensembl chr15:32,210,074...32,253,309
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Fgfr1
Fibroblast growth factor receptor 1
acts_upstream_of_or_within
ISO
MGI:95523 (PMID:15576401), (PMID:16540513)
RGD
PMID:15576401 PMID:16540513
NCBI chr16:66,491,930...66,547,161
Ensembl chr16:66,494,042...66,547,350
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Fgfr2
fibroblast growth factor receptor 2
acts_upstream_of_or_within
ISO
MGI:2153799|MGI:95522 (PMID:10518547), (PMID:16540513)
RGD
PMID:10518547 PMID:16540513
NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626
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Fgfr4
fibroblast growth factor receptor 4
acts_upstream_of_or_within
ISO
(PMID:15576401)
RGD
PMID:15576401
NCBI chr17:9,461,541...9,476,268
Ensembl chr17:9,461,547...9,476,242
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Fosl2
FOS like 2, AP-1 transcription factor subunit
acts_upstream_of_or_within
ISO
(PMID:30181393)
RGD
PMID:30181393
NCBI chr 6:24,297,898...24,319,219
Ensembl chr 6:24,300,956...24,320,034
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Foxa1
forkhead box A1
acts_upstream_of_or_within
ISO
MGI:1347476 (PMID:15668254)
RGD
PMID:15668254
NCBI chr 6:75,099,907...75,136,534
Ensembl chr 6:75,103,503...75,136,188
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Foxa2
forkhead box A2
acts_upstream_of_or_within
ISO
MGI:1347472 (PMID:15668254)
RGD
PMID:15668254
NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326
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Foxf1
forkhead box F1
involved_in acts_upstream_of_or_within
ISO
(PMID:19500772) MGI:1929432|MGI:2179135 (PMID:11437453), (PMID:11493558)
RGD
PMID:11437453 PMID:11493558 PMID:19500772
NCBI chr19:49,153,949...49,157,741
Ensembl chr19:49,153,699...49,157,738
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Foxp1
forkhead box P1
acts_upstream_of_or_within
ISO
MGI:2148705 (PMID:17428829)
RGD
PMID:17428829
NCBI chr 4:131,559,599...132,155,092
Ensembl chr 4:131,564,756...132,112,258
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Foxp2
forkhead box P2
acts_upstream_of_or_within
ISO
MGI:1914004 (PMID:17428829)
RGD
PMID:17428829
NCBI chr 4:43,133,827...43,712,442
Ensembl chr 4:43,133,912...43,711,683
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Fstl3
follistatin like 3
IEP
RGD
PMID:14692692
RGD:1302294
NCBI chr 7:9,923,574...9,929,223
Ensembl chr 7:9,923,576...9,939,639
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Gli1
GLI family zinc finger 1
acts_upstream_of_or_within
ISO
MGI:95728 (PMID:10725236)
RGD
PMID:10725236
NCBI chr 7:63,156,926...63,169,579
Ensembl chr 7:63,156,926...63,169,251
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Gli2
GLI family zinc finger 2
acts_upstream_of_or_within
ISO
MGI:1857509|MGI:95727 (PMID:10725236), (PMID:9731531)
RGD
PMID:9731531 PMID:10725236
NCBI chr13:29,946,882...30,163,589
Ensembl chr13:29,946,809...30,163,574
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Gli3
GLI family zinc finger 3
acts_upstream_of_or_within
ISO
MGI:1856276|MGI:98297 (PMID:15136151), (PMID:9268579)
RGD
PMID:9268579 PMID:15136151
NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
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Gpc3
glypican 3
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2159356 (PMID:10402475)
Ensembl RGD
PMID:10402475
GO_REF:0000107
NCBI chr X:131,868,986...132,236,824
Ensembl chr X:131,868,990...132,236,798
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Heg1
heart development protein with EGF-like domains 1
acts_upstream_of_or_within
ISO
MGI:3838392 (PMID:19151727)
RGD
PMID:19151727
NCBI chr11:67,006,954...67,095,020
Ensembl chr11:66,957,190...67,095,051
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Hes1
hes family bHLH transcription factor 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2149672 (PMID:10952889)
Ensembl RGD
PMID:10952889
GO_REF:0000107
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
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Hif1a
hypoxia inducible factor 1 subunit alpha
IEP
RGD
PMID:9398602
RGD:625724
NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
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Hikeshi
heat shock protein nuclear import factor hikeshi
acts_upstream_of_or_within
ISO
MGI:2449650 (PMID:16157679)
RGD
PMID:16157679
NCBI chr 1:143,825,399...143,849,361
Ensembl chr 1:143,825,923...143,849,363
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Hmgb1
high mobility group box 1
acts_upstream_of_or_within
ISO
MGI:3530901 (PMID:10391216)
RGD
PMID:10391216
NCBI chr12:5,972,950...5,979,658
Ensembl chr12:5,901,586...5,978,565 Ensembl chr16:5,901,586...5,978,565
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Hmgcs2
3-hydroxy-3-methylglutaryl-CoA synthase 2
IEP
RGD
PMID:7911291
RGD:2326221
NCBI chr 2:185,875,609...185,903,505
Ensembl chr 2:185,875,616...185,902,130
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Hnrnpa1
heterogeneous nuclear ribonucleoprotein A1
IEP
RGD
PMID:9457472
RGD:10045983
NCBI chr 7:134,375,318...134,381,610
Ensembl chr 7:134,375,150...134,381,609
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Hnrnpa2b1
heterogeneous nuclear ribonucleoprotein A2/B1
IEP
RGD
PMID:9761751
RGD:9685418
NCBI chr 4:80,534,659...80,545,297
Ensembl chr 4:80,534,651...80,545,249
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Hnrnpk
heterogeneous nuclear ribonucleoprotein K
IEP
RGD
PMID:16488668
RGD:10002779
NCBI chr17:6,262,936...6,275,001
Ensembl chr17:6,262,998...6,274,997
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Hoxa5
homeo box A5
acts_upstream_of_or_within
ISO
MGI:3723623 (PMID:17417799)
RGD
PMID:17417799
NCBI chr 4:81,302,341...81,306,234
Ensembl chr 4:81,302,353...81,306,234
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Hps1
HPS1, biogenesis of lysosomal organelles complex 3 subunit 1
acts_upstream_of_or_within
ISO
MGI:1333879 (PMID:12777251)
RGD
PMID:12777251
NCBI chr 1:241,551,180...241,577,292
Ensembl chr 1:241,551,175...241,577,268
G
Hsd11b1
hydroxysteroid 11-beta dehydrogenase 1
acts_upstream_of_or_within
ISO
MGI:2385796 (PMID:12439781)
RGD
PMID:12439781
NCBI chr13:104,728,539...104,798,884
Ensembl chr13:104,728,539...104,788,687
G
Ift25
intraflagellar transport 25
acts_upstream_of_or_within
ISO
MGI:4432759|MGI:5426875 (PMID:22595669)
RGD
PMID:22595669
NCBI chr 5:122,035,588...122,062,421
Ensembl chr 5:122,035,581...122,062,421
G
Ift88
intraflagellar transport 88
acts_upstream_of_or_within
ISO
MGI:3823090 (PMID:19036983)
RGD
PMID:19036983
NCBI chr15:31,573,325...31,666,068
Ensembl chr15:31,573,376...31,672,147
G
Igf1
insulin-like growth factor 1
acts_upstream_of_or_within
ISO
MGI:96787 (PMID:16691571)
RGD
PMID:16691571
NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296
G
Il18
interleukin 18
IEP
RGD
PMID:18952566
RGD:2307417
NCBI chr 8:50,904,630...50,932,887
Ensembl chr 8:50,906,960...50,932,887
G
Itga3
integrin subunit alpha 3
involved_in
ISO
(PMID:24621570)
RGD
PMID:24621570
NCBI chr10:79,990,160...80,022,206
Ensembl chr10:79,990,161...80,022,118
G
Jmjd6
jumonji domain containing 6, arginine demethylase and lysine hydroxylase
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2686850|MGI:3580706 (PMID:14645847), (PMID:15345036)
Ensembl RGD
PMID:14645847 PMID:15345036
GO_REF:0000107
NCBI chr10:102,041,131...102,047,182
Ensembl chr10:102,041,120...102,047,182
G
Kdr
kinase insert domain receptor
acts_upstream_of_or_within
ISO
(PMID:16375885)
RGD
PMID:16375885
NCBI chr14:32,217,871...32,261,018
Ensembl chr14:32,217,871...32,261,018
G
Lama5
laminin subunit alpha 5
acts_upstream_of_or_within
ISO
MGI:1934917 (PMID:12051813)
RGD
PMID:12051813
NCBI chr 3:167,270,296...167,318,370
Ensembl chr 3:167,270,296...167,318,451
G
Lhx3
LIM homeobox 3
IEP
RGD
PMID:16798779
RGD:1600300
NCBI chr 3:9,026,432...9,035,122
Ensembl chr 3:9,027,425...9,034,480
G
Lif
LIF, interleukin 6 family cytokine
acts_upstream_of_or_within
ISO
MGI:96432 (PMID:16691571)
RGD
PMID:16691571
NCBI chr14:79,131,049...79,140,486
Ensembl chr14:79,134,574...79,140,482
G
Lipa
lipase A, lysosomal acid type
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2451080 (PMID:14644759)
Ensembl RGD
PMID:14644759
GO_REF:0000107
NCBI chr 1:232,024,351...232,057,735
Ensembl chr 1:232,024,356...232,057,633
G
Lox
lysyl oxidase
acts_upstream_of_or_within
ISO
MGI:3610732 (PMID:16192629)
RGD
PMID:16192629
NCBI chr18:45,964,544...45,977,431
Ensembl chr18:45,967,343...46,041,477
G
Loxl3
lysyl oxidase-like 3
involved_in
ISO
(PMID:27645581)
RGD
PMID:27645581
NCBI chr 4:115,540,640...115,556,958
Ensembl chr 4:115,540,685...115,557,466
G
Mgp
matrix Gla protein
IMP
RGD
PMID:15136295
RGD:1582506
NCBI chr 4:169,766,290...169,769,612
Ensembl chr 4:169,766,279...169,769,667
G
Mir17
microRNA 17
acts_upstream_of_or_within
ISO
MGI:2676844|MGI:2676872|MGI:3618743|MGI:3629917|MGI:3629918 (PMID:18329372)
RGD
PMID:18329372
NCBI chr15:92,180,629...92,180,712
Ensembl chr15:92,180,629...92,180,712
G
Mir18a
microRNA 18a
acts_upstream_of_or_within
ISO
MGI:2676872|MGI:3618743|MGI:3619065|MGI:3629917|MGI:3629918 (PMID:18329372)
RGD
PMID:18329372
NCBI chr15:98,587,984...98,588,079
Ensembl chr15:92,180,765...92,180,860
G
Mir19a
microRNA 19a
acts_upstream_of_or_within
ISO
MGI:2676844|MGI:2676872|MGI:3619065|MGI:3629917|MGI:3629918 (PMID:18329372)
RGD
PMID:18329372
NCBI chr15:92,180,912...92,180,993
Ensembl chr15:92,180,912...92,180,993
G
Mir19b1
microRNA 19b-1
acts_upstream_of_or_within
ISO
MGI:2676844|MGI:2676872|MGI:3618743|MGI:3619065|MGI:3629918 (PMID:18329372)
RGD
PMID:18329372
NCBI chr15:92,181,214...92,181,300
Ensembl chr15:92,181,214...92,181,300
G
Mir20a
microRNA 20a
acts_upstream_of_or_within
ISO
MGI:2676844|MGI:3618743|MGI:3619065|MGI:3629917|MGI:3629918 (PMID:18329372)
RGD
PMID:18329372
NCBI chr15:92,181,084...92,181,168
Ensembl chr15:92,181,084...92,181,168
G
Mir92a1
microRNA 92a-1
acts_upstream_of_or_within
ISO
MGI:2676844|MGI:2676872|MGI:3618743|MGI:3619065|MGI:3629917 (PMID:18329372)
RGD
PMID:18329372
NCBI chr15:92,181,336...92,181,413
Ensembl chr15:92,181,336...92,181,413
G
Mme
membrane metallo-endopeptidase
IEP
RGD
PMID:1547865
RGD:13801036
NCBI chr 2:147,686,913...147,803,808
Ensembl chr 2:147,722,086...147,803,792
G
Mmp14
matrix metallopeptidase 14
acts_upstream_of_or_within
ISO
MGI:2386246 (PMID:15572153)
RGD
PMID:15572153
NCBI chr15:27,887,795...27,897,020
Ensembl chr15:27,887,727...27,899,864
G
Mosmo
modulator of smoothened
acts_upstream_of_or_within
ISO
(PMID:34486668)
RGD
PMID:34486668
NCBI chr 1:175,217,680...175,288,521
Ensembl chr 1:175,217,545...175,288,334
G
Muc19
mucin 19, oligomeric
acts_upstream_of_or_within
ISO
(PMID:37475871)
RGD
PMID:37475871
NCBI chr 7:123,017,896...123,139,053
Ensembl chr 7:123,017,896...123,139,053
G
Mycn
MYCN proto-oncogene, bHLH transcription factor
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2388717|MGI:3574949 (PMID:15716345)
Ensembl RGD
PMID:15716345
GO_REF:0000107
NCBI chr 6:35,717,764...35,723,590
Ensembl chr 6:35,717,764...35,723,590
G
Nfib
nuclear factor I/B
acts_upstream_of_or_within
ISO
MGI:2178748|MGI:3530139 (PMID:11850179), (PMID:15632069)
RGD
PMID:11850179 PMID:15632069
NCBI chr 5:96,759,208...96,974,001
Ensembl chr 5:96,764,653...96,975,479
G
Nkx2-1
NK2 homeobox 1
involved_in acts_upstream_of_or_within
ISO
(PMID:15494458), (PMID:16960125) MGI:1857494|MGI:2677488|MGI:3619325|MGI:3619326|MGI:3619327|MGI:3619328|MGI:3619373 (PMID:10706142), (PMID:12829717), (PMID:21350014)
RGD
PMID:10706142 PMID:12829717 PMID:15494458 PMID:16960125 PMID:21350014
NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791
G
Nkx2-8
NK2 homeobox 8
acts_upstream_of_or_within
ISO
MGI:3692933 (PMID:17079460)
RGD
PMID:17079460
NCBI chr 6:74,086,274...74,087,977
Ensembl chr 6:74,086,274...74,087,977
G
Nodal
nodal growth differentiation factor
acts_upstream_of_or_within
ISO
MGI:2158732 (PMID:11311163)
RGD
PMID:11311163
NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837
G
Nos3
nitric oxide synthase 3
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857229 (PMID:15016731)
Ensembl RGD
PMID:15016731
GO_REF:0000107
NCBI chr 4:10,793,834...10,814,170
Ensembl chr 4:10,793,834...10,814,166
G
Notch1
notch receptor 1
acts_upstream_of_or_within
ISO
(PMID:15064243)
RGD
PMID:15064243
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
G
Nphp3
nephrocystin 3
involved_in
ISO
(PMID:20007846)
RGD
PMID:20007846
NCBI chr 8:104,621,908...104,662,383
Ensembl chr 8:104,621,864...104,662,383
G
Nr3c1
nuclear receptor subfamily 3, group C, member 1
IEP
RGD
PMID:16371448
RGD:4892096
NCBI chr18:31,522,783...31,644,508
Ensembl chr18:31,271,681...31,393,375
G
Odad4
outer dynein arm docking complex subunit 4
acts_upstream_of_or_within
ISO
MGI:6110171 (PMID:27486780)
RGD
PMID:27486780
NCBI chr10:85,480,089...85,508,603
Ensembl chr10:85,480,094...85,508,603
G
Pde4d
phosphodiesterase 4D
IEP
RGD
PMID:20652950
RGD:7327159
NCBI chr 2:40,014,933...41,529,190
Ensembl chr 2:40,019,933...41,525,884
G
Pdgfra
platelet derived growth factor receptor alpha
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1926728 (PMID:11803579)
Ensembl RGD
PMID:11803579
GO_REF:0000107
NCBI chr14:33,005,838...33,054,347
Ensembl chr14:33,005,839...33,054,335
G
Pdpn
podoplanin
acts_upstream_of_or_within involved_in
IEP ISO ISS
MGI:2657021 (PMID:12654292) GO_REF:0000024
RGD UniProt
PMID:12654292 PMID:8652186
GO_REF:0000024, RGD:2292371
NCBI chr 5:155,601,691...155,635,656
Ensembl chr 5:155,601,691...155,635,656
G
Phex
phosphate regulating endopeptidase X-linked
IEP
RGD
PMID:11064151
RGD:11556272
NCBI chr X:37,607,553...37,856,183
Ensembl chr X:37,610,760...37,854,469
G
Pitx2
paired-like homeodomain 2
acts_upstream_of_or_within
ISO
MGI:1857844|MGI:1857846|MGI:1857880|MGI:2136268|MGI:2384494 (PMID:10498698), (PMID:10499586), (PMID:10572050), (PMID:18231602)
RGD
PMID:10498698 PMID:10499586 PMID:10572050 PMID:18231602
NCBI chr 2:217,717,738...217,737,293
Ensembl chr 2:217,717,693...217,737,293
G
Ppp1ca
protein phosphatase 1 catalytic subunit alpha
acts_upstream_of_or_within
ISO
(PMID:15042703)
RGD
PMID:15042703
NCBI chr 1:201,485,117...201,488,734
Ensembl chr 1:201,485,085...201,497,327
G
Prox1
prospero homeobox 1
involved_in
ISO
(PMID:8812486)
RGD
PMID:8812486
NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183
G
Ptn
pleiotrophin
IEP
RGD
PMID:2270483
RGD:9831441
NCBI chr 4:65,293,731...65,375,572
Ensembl chr 4:65,293,734...65,375,456
G
Rab3a
RAB3A, member RAS oncogene family
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3762127 (PMID:11359932)
Ensembl RGD
PMID:11359932
GO_REF:0000107
NCBI chr16:18,684,185...18,688,297
Ensembl chr16:18,684,188...18,688,336
G
Rbp4
retinol binding protein 4
involved_in
ISO
(PMID:15994349)
RGD
PMID:15994349
NCBI chr 1:235,893,917...235,901,315
Ensembl chr 1:235,893,917...235,901,399
G
Rida
reactive intermediate imine deaminase A homolog
IEP
RGD
PMID:12798936
RGD:9685563
NCBI chr 7:65,691,429...65,705,257
Ensembl chr 7:65,691,435...65,705,716
G
Shh
sonic hedgehog signaling molecule
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:1857796|MGI:1934261|MGI:1934268|MGI:2679524|MGI:95729 (PMID:15136151), (PMID:15305287), (PMID:17187775), (PMID:9731532), (PMID:9768363)
UniProt RGD
PMID:9731532 PMID:9768363 PMID:15136151 PMID:15305287 PMID:17187775
GO_REF:0000024
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
G
Sim2
SIM bHLH transcription factor 2
acts_upstream_of_or_within
ISO
MGI:2180881 (PMID:12024028)
RGD
PMID:12024028
NCBI chr11:33,414,218...33,453,663
Ensembl chr11:33,414,218...33,453,663
G
Slc23a1
solute carrier family 23 member 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:11984597)
Ensembl RGD
PMID:11984597
GO_REF:0000107
NCBI chr18:27,214,940...27,230,564
Ensembl chr18:27,216,281...27,230,697
G
Smad2
SMAD family member 2
acts_upstream_of_or_within
ISO
MGI:87912 (PMID:17849440)
RGD
PMID:17849440
NCBI chr18:69,849,884...69,918,926
Ensembl chr18:69,850,377...69,912,323
G
Smpd3
sphingomyelin phosphodiesterase 3
acts_upstream_of_or_within
ISO
MGI:1856877 (PMID:22945695)
RGD
PMID:22945695
NCBI chr19:34,162,337...34,245,786
Ensembl chr19:34,162,341...34,245,749
G
Sp1
Sp1 transcription factor
acts_upstream_of_or_within
ISO
MGI:1277166 (PMID:17584888)
RGD
PMID:17584888
NCBI chr 7:133,541,302...133,571,961
Ensembl chr 7:133,541,491...133,571,961
G
Sp3
Sp3 transcription factor
acts_upstream_of_or_within
ISO
MGI:98372 (PMID:17584888)
RGD
PMID:17584888
NCBI chr 3:57,811,855...57,857,150
Ensembl chr 3:57,812,075...57,860,342
G
Sparc
secreted protein acidic and cysteine rich
IMP
RGD
PMID:7654384
RGD:2300073
NCBI chr10:39,516,394...39,538,252
Ensembl chr10:39,516,406...39,538,396
G
Spry2
sprouty RTK signaling antagonist 2
acts_upstream_of_or_within
ISO
(PMID:10074434)
RGD
PMID:10074434
NCBI chr15:82,692,291...82,697,408
Ensembl chr15:82,692,143...82,698,009
G
Srebf1
sterol regulatory element binding transcription factor 1
IEP
RGD
PMID:12896875
RGD:1304415
NCBI chr10:45,007,637...45,029,650
Ensembl chr10:45,007,637...45,029,650
G
Srebf1_v2
sterol regulatory element binding factor 1, variant 2
IEP
RGD
PMID:12896875
RGD:1304415
G
Stk40
serine/threonine kinase 40
acts_upstream_of_or_within
ISO
MGI:5496282 (PMID:23293024)
RGD
PMID:23293024
NCBI chr 5:138,380,049...138,417,802
Ensembl chr 5:138,381,159...138,417,796
G
Stra6
signaling receptor and transporter of retinol STRA6
involved_in
ISO
(PMID:17273977)
RGD
PMID:17273977
NCBI chr 8:58,548,899...58,568,861
Ensembl chr 8:58,549,736...58,568,860
G
Tab1
TGF-beta activated kinase 1/MAP3K7 binding protein 1
acts_upstream_of_or_within
ISO
MGI:2667182 (PMID:12464436)
RGD
PMID:12464436
NCBI chr 7:111,675,829...111,707,058
Ensembl chr 7:111,686,371...111,707,058
G
Tbx4
T-box transcription factor 4
acts_upstream_of_or_within
ISO
(PMID:12508227)
RGD
PMID:12508227
NCBI chr10:70,730,686...70,760,829
Ensembl chr10:70,731,163...70,760,825
G
Tbx5
T-box transcription factor 5
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:12508227)
Ensembl RGD
PMID:12508227
GO_REF:0000107
NCBI chr12:36,686,344...36,739,253
Ensembl chr12:36,688,014...36,734,885
G
Tgfb1
transforming growth factor, beta 1
TAS
RGD
PMID:7852342
RGD:70296
NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
G
Tgfb2
transforming growth factor, beta 2
TAS
RGD
PMID:7852342
RGD:70296
NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
G
Tgfb3
transforming growth factor, beta 3
NAS
RGD
PMID:7852342
RGD:70296
NCBI chr 6:105,704,058...105,726,661
Ensembl chr 6:105,704,236...105,726,564
G
Tgfbr1
transforming growth factor, beta receptor 1
IEP
RGD
PMID:10835329
RGD:2302034
NCBI chr 5:61,653,773...61,710,777
Ensembl chr 5:61,653,233...61,710,777
G
Tgfbr2
transforming growth factor, beta receptor 2
acts_upstream_of_or_within
IEP ISO
MGI:2384513 (PMID:18990706)
RGD
PMID:18990706 PMID:7573476
RGD:1601625
NCBI chr 8:115,794,537...115,883,615
Ensembl chr 8:115,794,537...115,883,228
G
Thra
thyroid hormone receptor alpha
IEP
RGD
PMID:17496154
RGD:2314319
NCBI chr10:83,701,885...83,729,408
Ensembl chr10:83,700,755...83,729,936
G
Thra_v1
thyroid hormone receptor alpha, variant 1
IEP
RGD
PMID:17496154
RGD:2314319
G
Thra_v2
thyroid hormone receptor alpha, variant 2
IEP
RGD
PMID:17496154
RGD:2314319
G
Timeless
timeless circadian regulator
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:12950082)
Ensembl RGD
PMID:12950082
GO_REF:0000107
NCBI chr 7:654,804...678,769
Ensembl chr 7:654,822...678,738
G
Tmbim6
transmembrane BAX inhibitor motif containing 6
IEP
RGD
PMID:10198159
RGD:2291962
NCBI chr 7:130,527,313...130,542,567
Ensembl chr 7:130,527,316...130,543,633
G
Tmtc3
transmembrane O-mannosyltransferase targeting cadherins 3
acts_upstream_of_or_within
ISO
MGI:4124060 (PMID:21956870)
RGD
PMID:21956870
NCBI chr 7:35,264,886...35,310,010
Ensembl chr 7:35,264,892...35,310,385
G
Tshz3
teashirt zinc finger homeobox 3
involved_in
ISO
(PMID:18776146)
RGD
PMID:18776146
NCBI chr 1:89,386,732...89,460,719
Ensembl chr 1:89,381,858...89,460,874
G
Vegfa
vascular endothelial growth factor A
acts_upstream_of_or_within
ISO
MGI:1931047 (PMID:12053176), (PMID:15927453)
RGD
PMID:12053176 PMID:15927453
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
G
Wnt2
Wnt family member 2
IEP
RGD
PMID:1377452
RGD:2314905
NCBI chr 4:46,328,408...46,374,673
Ensembl chr 4:46,333,998...46,374,402
G
Wnt5a
Wnt family member 5A
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857617 (PMID:12142021)
Ensembl RGD
PMID:12142021
GO_REF:0000107
NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234
G
Wnt7b
Wnt family member 7B
acts_upstream_of_or_within
ISO
MGI:3793280 (PMID:18343501)
RGD
PMID:18343501
NCBI chr 7:116,634,817...116,679,459
Ensembl chr 7:116,634,814...116,679,581
G
Ywhaz
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta
involved_in
IEA ISO
GO_REF:0000107 (PMID:29118970)
Ensembl RGD
PMID:29118970
GO_REF:0000107
NCBI chr 7:67,941,353...67,963,651
Ensembl chr 7:67,940,017...67,963,668
G
Zfpm2
zinc finger protein, multitype 2
acts_upstream_of_or_within
ISO
MGI:3587413 (PMID:16103912)
RGD
PMID:16103912
NCBI chr 7:71,678,658...72,116,209
Ensembl chr 7:71,678,880...72,116,205
G
Zic3
Zic family member 3
involved_in
ISO
(PMID:9354794)
RGD
PMID:9354794
NCBI chr X:136,123,662...136,129,627
Ensembl chr X:136,124,026...136,134,746
G
Stra6
signaling receptor and transporter of retinol STRA6
involved_in
ISO IEA
(PMID:17273977) GO_REF:0000107
RGD Ensembl
PMID:17273977
GO_REF:0000107
NCBI chr 8:58,548,899...58,568,861
Ensembl chr 8:58,549,736...58,568,860
G
Fgfr3
fibroblast growth factor receptor 3
acts_upstream_of_or_within
ISO
MGI:95525 (PMID:9716527)
RGD
PMID:9716527
NCBI chr14:76,987,242...77,002,671
Ensembl chr14:76,987,993...77,003,341
G
Fgfr4
fibroblast growth factor receptor 4
acts_upstream_of_or_within
ISO
MGI:95524 (PMID:9716527)
RGD
PMID:9716527
NCBI chr17:9,461,541...9,476,268
Ensembl chr17:9,461,547...9,476,242
G
Fosl2
FOS like 2, AP-1 transcription factor subunit
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:28818870)
Ensembl RGD
PMID:28818870
GO_REF:0000107
NCBI chr 6:24,297,898...24,319,219
Ensembl chr 6:24,300,956...24,320,034
G
Foxa1
forkhead box A1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2653543 (PMID:16214823)
Ensembl RGD
PMID:16214823
GO_REF:0000107
NCBI chr 6:75,099,907...75,136,534
Ensembl chr 6:75,103,503...75,136,188
G
Hoxa5
homeo box A5
acts_upstream_of_or_within
ISO
MGI:2150397 (PMID:9441679)
RGD
PMID:9441679
NCBI chr 4:81,302,341...81,306,234
Ensembl chr 4:81,302,353...81,306,234
G
Itgb6
integrin subunit beta 6
acts_upstream_of_or_within
ISO
MGI:1926484 (PMID:12634787)
RGD
PMID:12634787
NCBI chr 3:45,046,295...45,170,532
Ensembl chr 3:45,048,044...45,121,671
G
Mmp12
matrix metallopeptidase 12
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1926484|MGI:2386174 (PMID:12634787)
Ensembl RGD
PMID:12634787
GO_REF:0000107
NCBI chr 8:4,581,785...4,591,687
Ensembl chr 8:4,581,785...4,599,611
G
Tcf21
transcription factor 21
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:2148207 (PMID:10572052)
UniProt RGD
PMID:10572052
GO_REF:0000024
NCBI chr 1:22,701,353...22,704,212
Ensembl chr 1:22,701,353...22,704,202
G
Tgfb1
transforming growth factor, beta 1
acts_upstream_of_or_within
ISO
MGI:1926484|MGI:2386174 (PMID:12634787)
RGD
PMID:12634787
NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
G
Fgf10
fibroblast growth factor 10
acts_upstream_of_or_within
ISO
MGI:1859647|MGI:3629660 (PMID:15800000)
RGD
PMID:15800000
NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866
G
Bmp4
bone morphogenetic protein 4
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:8674409) GO_REF:0000107
RGD Ensembl
PMID:8674409
GO_REF:0000107
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
G
Bmp4
bone morphogenetic protein 4
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:18367557)
Ensembl RGD
PMID:18367557
GO_REF:0000107
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
G
Fgf10
fibroblast growth factor 10
acts_upstream_of_or_within
ISO
MGI:1345138|MGI:1345139 (PMID:21764747)
RGD
PMID:21764747
NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866
G
Fgfr2
fibroblast growth factor receptor 2
acts_upstream_of_or_within
ISO
MGI:3629660 (PMID:16989802)
RGD
PMID:16989802
NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626
G
Rdh10
retinol dehydrogenase 10
acts_upstream_of_or_within
ISO
(PMID:17473173)
RGD
PMID:17473173
NCBI chr 5:3,186,671...3,215,572
Ensembl chr 5:3,188,445...3,215,572
G
Spry1
sprouty RTK signaling antagonist 1
acts_upstream_of_or_within
ISO
MGI:1099809|MGI:1345138 (PMID:21764747)
RGD
PMID:21764747
NCBI chr 2:120,557,256...120,561,917
Ensembl chr 2:120,556,706...120,566,189
G
Spry2
sprouty RTK signaling antagonist 2
acts_upstream_of_or_within
ISO
MGI:1099809|MGI:1345139 (PMID:21764747)
RGD
PMID:21764747
NCBI chr15:82,692,291...82,697,408
Ensembl chr15:82,692,143...82,698,009
G
Yap1
Yes1 associated transcriptional regulator
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3053959|MGI:5316446 (PMID:25043473)
Ensembl RGD
PMID:25043473
GO_REF:0000107
NCBI chr 8:5,095,705...5,166,808
Ensembl chr 8:5,095,722...5,167,010
G
Fgf10
fibroblast growth factor 10
acts_upstream_of_or_within
ISO
(PMID:9740653)
RGD
PMID:9740653
NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866
G
Shh
sonic hedgehog signaling molecule
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857796 (PMID:9731532)
Ensembl RGD
PMID:9731532
GO_REF:0000107
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
G
Tmtc3
transmembrane O-mannosyltransferase targeting cadherins 3
acts_upstream_of_or_within
ISO
MGI:4124060 (PMID:21956870)
RGD
PMID:21956870
NCBI chr 7:35,264,886...35,310,010
Ensembl chr 7:35,264,892...35,310,385
G
Tnc
tenascin C
IMP
RGD
PMID:16928692
RGD:4889612
NCBI chr 5:77,375,851...77,460,712
Ensembl chr 5:77,375,851...77,460,624
G
Gata6
GATA binding protein 6
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:108067 (PMID:17164424)
Ensembl RGD
PMID:17164424
GO_REF:0000107
NCBI chr18:2,188,121...2,219,532
Ensembl chr18:2,188,121...2,219,532
G
Nfib
nuclear factor I/B
involved_in
ISS ISO
GO_REF:0000024 (PMID:21513708)
UniProt RGD
PMID:21513708
GO_REF:0000024
NCBI chr 5:96,759,208...96,974,001
Ensembl chr 5:96,764,653...96,975,479
G
Nkx2-1
NK2 homeobox 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:107516 (PMID:17164424)
Ensembl RGD
PMID:17164424
GO_REF:0000107
NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791
G
Rbpj
recombination signal binding protein for immunoglobulin kappa J region
acts_upstream_of_or_within
ISO
MGI:3583755 (PMID:22797898)
RGD
PMID:22797898
NCBI chr14:57,338,493...57,523,330
Ensembl chr14:57,338,507...57,523,353
G
Ctsh
cathepsin H
involved_in
ISS ISO
GO_REF:0000024 (PMID:17500053)
UniProt RGD
PMID:17500053
GO_REF:0000024
NCBI chr 8:90,608,941...90,627,824
Ensembl chr 8:90,608,941...90,627,824
G
Bmp4
bone morphogenetic protein 4
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:8674409) GO_REF:0000107
RGD Ensembl
PMID:8674409
GO_REF:0000107
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
G
Foxp2
forkhead box P2
acts_upstream_of
ISO
MGI:1914004 (PMID:17428829)
RGD
PMID:17428829
NCBI chr 4:43,133,827...43,712,442
Ensembl chr 4:43,133,912...43,711,683
G
Map2k1
mitogen activated protein kinase kinase 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1346867 (PMID:25100655)
Ensembl RGD
PMID:25100655
GO_REF:0000107
NCBI chr 8:64,683,449...64,754,900
Ensembl chr 8:64,683,449...64,755,147
G
Map2k2
mitogen activated protein kinase kinase 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1346866 (PMID:25100655)
Ensembl RGD
PMID:25100655
GO_REF:0000107
NCBI chr 7:8,590,729...8,610,279
Ensembl chr 7:8,580,905...8,610,243
G
Wnt2
Wnt family member 2
acts_upstream_of
ISO
MGI:4361155 (PMID:19686689)
RGD
PMID:19686689
NCBI chr 4:46,328,408...46,374,673
Ensembl chr 4:46,333,998...46,374,402
G
Bmp4
bone morphogenetic protein 4
acts_upstream_of_or_within
IEP ISO
(PMID:8674409)
RGD
PMID:8674409 PMID:8769111
RGD:2306315
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
G
Ctnnb1
catenin beta 1
involved_in acts_upstream_of acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2148567 (PMID:18533146) MGI:2148567 (PMID:18231602)
Ensembl RGD
PMID:18231602 PMID:18533146
GO_REF:0000107
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
G
Ctsd
cathepsin D
NOT|involved_in
ISO
(PMID:17500053)
RGD
PMID:17500053
NCBI chr 1:197,527,467...197,539,343
Ensembl chr 1:197,527,467...197,539,488
G
Ctsl
cathepsin L
NOT|involved_in
ISO
(PMID:17500053)
RGD
PMID:17500053
NCBI chr17:764,370...770,533
Ensembl chr17:764,309...770,548
G
Ctsz
cathepsin Z
involved_in
ISO
(PMID:17500053)
RGD
PMID:17500053
NCBI chr 3:163,224,875...163,235,645
Ensembl chr 3:163,224,875...163,235,645
G
Dag1
dystroglycan 1
acts_upstream_of_or_within
ISO
(PMID:11798066)
RGD
PMID:11798066
NCBI chr 8:108,890,926...108,955,611
Ensembl chr 8:108,890,929...108,952,325
G
Dlg5
discs large MAGUK scaffold protein 5
acts_upstream_of_or_within
ISO
MGI:3757646 (PMID:23466739)
RGD
PMID:23466739
NCBI chr15:75,786...209,735
Ensembl chr15:75,786...187,837
G
Esrp1
epithelial splicing regulatory protein 1
acts_upstream_of_or_within
ISO
MGI:1924661 (PMID:26371508)
RGD
PMID:26371508
NCBI chr 5:24,427,611...24,482,157
Ensembl chr 5:24,428,717...24,482,062
G
Esrp2
epithelial splicing regulatory protein 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1917326 (PMID:26371508)
Ensembl RGD
PMID:26371508
GO_REF:0000107
NCBI chr19:34,034,559...34,041,726
Ensembl chr19:34,034,559...34,041,726
G
Ext1
exostosin glycosyltransferase 1
acts_upstream_of_or_within
ISO
(PMID:28859094)
RGD
PMID:28859094
NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357
G
Fgf10
fibroblast growth factor 10
acts_upstream_of_or_within
ISO
MGI:1859647|MGI:1927833|MGI:3629660 (PMID:15800000), (PMID:16169547), (PMID:16375885), (PMID:17560563), (PMID:9428423), (PMID:9784490), (PMID:9916808)
RGD
PMID:9428423 PMID:9784490 PMID:9916808 PMID:15800000 PMID:16169547 PMID:16375885 PMID:17560563 More...
NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866
G
Fgfr2
fibroblast growth factor receptor 2
acts_upstream_of_or_within
ISO
MGI:3044679 (PMID:24058167)
RGD
PMID:24058167
NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626
G
Foxa1
forkhead box A1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1347476 (PMID:15668254)
Ensembl RGD
PMID:15668254
GO_REF:0000107
NCBI chr 6:75,099,907...75,136,534
Ensembl chr 6:75,103,503...75,136,188
G
Foxa2
forkhead box A2
acts_upstream_of_or_within
ISO
MGI:1347472 (PMID:15668254)
RGD
PMID:15668254
NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326
G
Foxf1
forkhead box F1
acts_upstream_of_or_within
ISO
MGI:1929432 (PMID:11493558)
RGD
PMID:11493558
NCBI chr19:49,153,949...49,157,741
Ensembl chr19:49,153,699...49,157,738
G
Hhip
Hedgehog-interacting protein
acts_upstream_of_or_within
ISO
MGI:2450891 (PMID:12569124)
RGD
PMID:12569124
NCBI chr19:27,863,684...27,952,528
Ensembl chr19:27,863,213...27,952,528
G
Hmga2
high mobility group AT-hook 2
acts_upstream_of_or_within
ISO
(PMID:24661562)
RGD
PMID:24661562
NCBI chr 7:55,877,145...55,998,813
Ensembl chr 7:55,880,112...55,994,784
G
Hoxa5
homeo box A5
acts_upstream_of_or_within
ISO
MGI:2150397 (PMID:9441679)
RGD
PMID:9441679
NCBI chr 4:81,302,341...81,306,234
Ensembl chr 4:81,302,353...81,306,234
G
Kras
KRAS proto-oncogene, GTPase
acts_upstream_of_or_within
ISO
MGI:98371 (PMID:24058167)
RGD
PMID:24058167
NCBI chr 4:178,185,418...178,218,484
G
Lama1
laminin subunit alpha 1
acts_upstream_of_or_within
ISO
(PMID:11798066), (PMID:1907584)
RGD
PMID:1907584 PMID:11798066
NCBI chr 9:107,692,770...107,816,847
Ensembl chr 9:107,692,770...107,817,478
G
Nkx2-1
NK2 homeobox 1
involved_in
ISO IEA
(PMID:8675988) GO_REF:0000107
RGD Ensembl
PMID:8675988
GO_REF:0000107
NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791
G
Rspo2
R-spondin 2
acts_upstream_of_or_within
ISO
MGI:3045965 (PMID:18256198)
RGD
PMID:18256198
NCBI chr 7:74,096,378...74,239,398
Ensembl chr 7:74,103,090...74,238,933
G
Shh
sonic hedgehog signaling molecule
acts_upstream_of_or_within
IEP ISO
MGI:1857796 (PMID:10500184), (PMID:9731532)
RGD
PMID:9731532 PMID:10500184 PMID:8769111
RGD:2306315
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
G
Sox2
SRY-box transcription factor 2
acts_upstream_of_or_within
ISO
(PMID:18374910)
RGD
PMID:18374910
NCBI chr 2:117,536,929...117,539,340
Ensembl chr 2:117,536,929...117,539,338
G
Sox9
SRY-box transcription factor 9
acts_upstream_of_or_within
ISO
MGI:2385468|MGI:96680 (PMID:24058167)
RGD
PMID:24058167
NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
G
Tbx2
T-box transcription factor 2
involved_in
ISO
UniProtKB:P70324 (PMID:27720610)
RGD
PMID:27720610
NCBI chr10:70,679,670...70,688,868
Ensembl chr10:70,679,518...70,688,529
G
Tmem67
transmembrane protein 67
involved_in
ISO
(PMID:26035863)
RGD
PMID:26035863
NCBI chr 5:25,536,458...25,589,378
Ensembl chr 5:25,536,458...25,589,334
G
Celsr1
cadherin, EGF LAG seven-pass G-type receptor 1
acts_upstream_of_or_within
ISO
MGI:2668337 (PMID:20223754)
RGD
PMID:20223754
NCBI chr 7:116,987,616...117,125,035
Ensembl chr 7:116,987,605...117,125,164
G
Vangl2
VANGL planar cell polarity protein 2
acts_upstream_of_or_within
ISO
MGI:1857642 (PMID:20223754)
RGD
PMID:20223754
NCBI chr13:84,462,731...84,489,404
Ensembl chr13:84,465,527...84,489,378
G
Shh
sonic hedgehog signaling molecule
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857796 (PMID:10500184)
Ensembl RGD
PMID:10500184
GO_REF:0000107
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
G
Cfc1
cripto, FRL-1, cryptic family 1
acts_upstream_of_or_within
ISO
MGI:2179530 (PMID:10521397)
RGD
PMID:10521397
NCBI chr 9:36,742,106...36,751,931
Ensembl chr 9:36,739,071...36,751,930
G
Nodal
nodal growth differentiation factor
acts_upstream_of_or_within
ISO
MGI:2158732 (PMID:11311163)
RGD
PMID:11311163
NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837
G
Pitx2
paired-like homeodomain 2
acts_upstream_of_or_within
ISO
MGI:2136268 (PMID:11493526)
RGD
PMID:11493526
NCBI chr 2:217,717,738...217,737,293
Ensembl chr 2:217,717,693...217,737,293
G
Adamtsl2
ADAMTS-like 2
acts_upstream_of_or_within
ISO
(PMID:25762570)
RGD
PMID:25762570
NCBI chr 3:10,397,774...10,434,557
Ensembl chr 3:10,404,626...10,434,554
G
Hoxa5
homeo box A5
acts_upstream_of_or_within
ISO
MGI:2150397 (PMID:9441679)
RGD
PMID:9441679
NCBI chr 4:81,302,341...81,306,234
Ensembl chr 4:81,302,353...81,306,234
G
Abca12
ATP binding cassette subfamily A member 12
NOT|acts_upstream_of_or_within
ISO
MGI:3528440 (PMID:18957418) MGI:3809668 (PMID:18632686)
RGD
PMID:18632686 PMID:18957418
NCBI chr 9:72,822,661...72,995,748
Ensembl chr 9:72,823,350...72,996,049
G
Ace
angiotensin I converting enzyme
IMP
RGD
PMID:22587910
RGD:6893470
NCBI chr10:90,910,316...90,930,437
Ensembl chr10:90,910,316...90,931,131
G
Ada
adenosine deaminase
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857117|MGI:2683027 (PMID:10899903)
Ensembl RGD
PMID:10899903
GO_REF:0000107
NCBI chr 3:152,398,745...152,422,854
Ensembl chr 3:152,398,747...152,447,088
G
Atp7a
ATPase copper transporting alpha
acts_upstream_of_or_within
ISO
MGI:1856097 (PMID:937819)
RGD
PMID:937819
NCBI chr X:71,094,144...71,201,550
Ensembl chr X:71,094,202...71,198,354
G
Atxn1
ataxin 1
acts_upstream_of_or_within
ISO
MGI:1918972|MGI:3694797 (PMID:22014525)
RGD
PMID:22014525
NCBI chr17:18,737,491...19,142,360
Ensembl chr17:18,737,533...19,142,360
G
Atxn1l
ataxin 1 like
acts_upstream_of_or_within
ISO
MGI:104783|MGI:1918972|MGI:5301616 (PMID:22014525)
RGD
PMID:22014525
NCBI chr19:37,700,341...37,711,529
Ensembl chr19:37,700,106...37,711,538
G
Bloc1s6
biogenesis of lysosomal organelles complex 1 subunit 6
acts_upstream_of_or_within
ISO
MGI:1856982 (PMID:16439805), (PMID:19381131)
RGD
PMID:16439805 PMID:19381131
NCBI chr 3:109,816,397...109,826,528
Ensembl chr 3:109,816,366...109,828,308
G
Bmp4
bone morphogenetic protein 4
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:8674409) GO_REF:0000107
RGD Ensembl
PMID:8674409
GO_REF:0000107
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
G
Bmpr2
bone morphogenetic protein receptor type 2
involved_in
ISO
(PMID:18552156)
RGD
PMID:18552156
NCBI chr 9:61,192,718...61,307,280
Ensembl chr 9:61,190,566...61,301,809
G
Cic
capicua transcriptional repressor
acts_upstream_of_or_within
ISO
MGI:104783|MGI:3694797|MGI:4125985 (PMID:22014525)
RGD
PMID:22014525
NCBI chr 1:80,853,920...80,880,537
Ensembl chr 1:80,853,920...80,880,532
G
Cldn18
claudin 18
involved_in
ISO
(PMID:24787463)
RGD
PMID:24787463
NCBI chr 8:100,246,499...100,265,797
Ensembl chr 8:100,247,633...100,273,351
G
Col6a1
collagen type VI alpha 1 chain
acts_upstream_of_or_within
ISO
MGI:2153356 (PMID:31837950)
RGD
PMID:31837950
NCBI chr20:11,906,105...11,924,599
Ensembl chr20:11,905,957...11,924,597
G
Dbn1
drebrin 1
IEP
RGD
PMID:15928322
RGD:10398812
NCBI chr17:9,150,608...9,164,982
Ensembl chr17:9,150,659...9,164,984
G
Edn2
endothelin 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:5519239 (PMID:23676500)
Ensembl RGD
PMID:23676500
GO_REF:0000107
NCBI chr 5:133,751,316...133,756,814
Ensembl chr 5:133,751,217...133,756,814
G
Errfi1
ERBB receptor feedback inhibitor 1
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:19710174) GO_REF:0000107
UniProt RGD Ensembl
PMID:19710174
GO_REF:0000024 GO_REF:0000107
NCBI chr 5:161,323,981...161,337,289
Ensembl chr 5:161,323,998...161,337,282
G
Fbn1
fibrillin 1
acts_upstream_of_or_within
ISO
MGI:1857348 (PMID:16439805)
RGD
PMID:16439805
NCBI chr 3:112,554,257...112,750,835
Ensembl chr 3:112,554,925...112,750,889
G
Fgf10
fibroblast growth factor 10
acts_upstream_of_or_within
ISO
MGI:3629660|MGI:95523 (PMID:16989802), (PMID:17560563)
RGD
PMID:16989802 PMID:17560563
NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866
G
Fgfr2
fibroblast growth factor receptor 2
acts_upstream_of_or_within
ISO
MGI:1099809|MGI:3629660 (PMID:16989802)
RGD
PMID:16989802
NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626
G
Flt4
Fms related receptor tyrosine kinase 4
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1856694 (PMID:24733830)
Ensembl RGD
PMID:24733830
GO_REF:0000107
NCBI chr10:33,913,725...33,954,770
Ensembl chr10:33,913,608...33,954,770
G
Fosl2
FOS like 2, AP-1 transcription factor subunit
acts_upstream_of_or_within
ISO
(PMID:28818870)
RGD
PMID:28818870
NCBI chr 6:24,297,898...24,319,219
Ensembl chr 6:24,300,956...24,320,034
G
Foxf1
forkhead box F1
acts_upstream_of_or_within
ISO
MGI:1929432 (PMID:11493558)
RGD
PMID:11493558
NCBI chr19:49,153,949...49,157,741
Ensembl chr19:49,153,699...49,157,738
G
Foxp2
forkhead box P2
acts_upstream_of_or_within
ISO
MGI:3584266 (PMID:17428829)
RGD
PMID:17428829
NCBI chr 4:43,133,827...43,712,442
Ensembl chr 4:43,133,912...43,711,683
G
Fzd1
frizzled class receptor 1
IEP
RGD
PMID:17911382
RGD:2304247
NCBI chr 4:29,310,303...29,314,701
Ensembl chr 4:29,310,091...29,312,643 Ensembl chr 4:29,310,091...29,312,643
G
Gh1
growth hormone 1
IMP
RGD
PMID:18985281
RGD:2315627
NCBI chr10:91,228,102...91,230,079
Ensembl chr10:91,228,103...91,230,078
G
Hopx
HOP homeobox
acts_upstream_of_or_within
ISO
MGI:2389244 (PMID:16510470)
RGD
PMID:16510470
NCBI chr14:31,055,912...31,082,909
Ensembl chr14:31,075,148...31,082,909
G
Hoxa5
homeo box A5
acts_upstream_of_or_within
ISO
MGI:2150397 (PMID:15295088), (PMID:17003488)
RGD
PMID:15295088 PMID:17003488
NCBI chr 4:81,302,341...81,306,234
Ensembl chr 4:81,302,353...81,306,234
G
Hs6st1
heparan sulfate 6-O-sulfotransferase 1
acts_upstream_of_or_within
ISO
MGI:3715259 (PMID:17405882)
RGD
PMID:17405882
NCBI chr 9:38,283,502...38,322,684
Ensembl chr 9:38,282,395...38,322,683
G
Igf1
insulin-like growth factor 1
acts_upstream_of_or_within
ISO
MGI:1926485|MGI:96787 (PMID:16691571)
RGD
PMID:16691571
NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296
G
Igfbp5
insulin-like growth factor binding protein 5
involved_in
ISO
(PMID:15010534)
RGD
PMID:15010534
NCBI chr 9:74,452,371...74,464,953
Ensembl chr 9:74,448,382...74,465,156
G
Itgb6
integrin subunit beta 6
acts_upstream_of_or_within
ISO
MGI:1926484 (PMID:12634787)
RGD
PMID:12634787
NCBI chr 3:45,046,295...45,170,532
Ensembl chr 3:45,048,044...45,121,671
G
Kdr
kinase insert domain receptor
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:12053176)
Ensembl RGD
PMID:12053176
GO_REF:0000107
NCBI chr14:32,217,871...32,261,018
Ensembl chr14:32,217,871...32,261,018
G
Lif
LIF, interleukin 6 family cytokine
acts_upstream_of_or_within involved_in
ISO IEA
MGI:96432 (PMID:16691571) GO_REF:0000107
RGD Ensembl
PMID:16691571
GO_REF:0000107
NCBI chr14:79,131,049...79,140,486
Ensembl chr14:79,134,574...79,140,482
G
Man1a2
mannosidase, alpha, class 1A, member 2
acts_upstream_of_or_within
ISO
MGI:3703789 (PMID:17121831)
RGD
PMID:17121831
NCBI chr 2:187,947,484...188,096,332
Ensembl chr 2:187,951,617...188,096,332
G
Man2a1
mannosidase, alpha, class 2A, member 1
acts_upstream_of_or_within
ISO
MGI:2150656 (PMID:16754854)
RGD
PMID:16754854
NCBI chr 9:104,252,001...104,408,349
Ensembl chr 9:104,252,001...104,408,349
G
Mapk8ip3
mitogen-activated protein kinase 8 interacting protein 3
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3527900 (PMID:18324732)
Ensembl RGD
PMID:18324732
GO_REF:0000107
NCBI chr10:13,918,417...13,958,335
Ensembl chr10:13,918,400...13,958,273
G
Mecp2
methyl CpG binding protein 2
IEP
RGD
PMID:21425435
RGD:8552971
NCBI chr X:151,781,177...151,844,687
Ensembl chr X:151,789,930...151,844,689
G
Meg3
maternally expressed 3
acts_upstream_of_or_within
ISO
MGI:3842511 (PMID:19264764)
RGD
PMID:19264764
NCBI chr 6:128,491,808...128,524,010
G
Mmp12
matrix metallopeptidase 12
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2386174 (PMID:12634787)
Ensembl RGD
PMID:12634787
GO_REF:0000107
NCBI chr 8:4,581,785...4,591,687
Ensembl chr 8:4,581,785...4,599,611
G
Myocd
myocardin
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3052940 (PMID:21357509)
Ensembl RGD
PMID:21357509
GO_REF:0000107
NCBI chr10:49,833,219...49,928,806
Ensembl chr10:49,836,641...49,927,627
G
Nkiras1
NFKB inhibitor interacting Ras-like 1
acts_upstream_of_or_within
ISO
MGI:1919216 (PMID:25220458)
RGD
PMID:25220458
NCBI chr15:7,493,531...7,503,758
Ensembl chr15:7,493,531...7,503,854
G
Nkiras2
NFKB inhibitor interacting Ras-like 2
acts_upstream_of_or_within
ISO
MGI:1916971 (PMID:25220458)
RGD
PMID:25220458
NCBI chr10:85,554,704...85,562,072
Ensembl chr10:85,557,944...85,562,072
G
Pdgfa
platelet derived growth factor subunit A
involved_in acts_upstream_of_or_within
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:23938297), (PMID:9374392) MGI:1926817|MGI:5548172 (PMID:11803579), (PMID:23938297)
UniProt Ensembl RGD
PMID:9374392 PMID:11803579 PMID:23938297
GO_REF:0000024 GO_REF:0000107
NCBI chr12:15,645,549...15,667,056
Ensembl chr12:15,645,541...15,666,497
G
Pdpn
podoplanin
acts_upstream_of_or_within
ISO
MGI:2657021 (PMID:16869965)
RGD
PMID:16869965
NCBI chr 5:155,601,691...155,635,656
Ensembl chr 5:155,601,691...155,635,656
G
Pgr
progesterone receptor
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3032652 (PMID:24190884)
Ensembl RGD
PMID:24190884
GO_REF:0000107
NCBI chr 8:6,072,673...6,131,552
Ensembl chr 8:6,072,673...6,131,344
G
Phf14
PHD finger protein 14
acts_upstream_of_or_within
ISO
MGI:5426539 (PMID:22730381)
RGD
PMID:22730381
NCBI chr 4:40,009,691...40,195,877
Ensembl chr 4:40,009,264...40,195,885
G
Pkdcc
protein kinase domain containing, cytoplasmic
involved_in
ISO
(PMID:19465597)
RGD
PMID:19465597
NCBI chr 6:11,455,686...11,465,002
Ensembl chr 6:11,455,686...11,465,556
G
Psen2
presenilin 2
acts_upstream_of_or_within
ISO
MGI:2149117 (PMID:10518543)
RGD
PMID:10518543
NCBI chr13:91,967,506...91,993,240
Ensembl chr13:91,967,983...91,993,174
G
Pthlh
parathyroid hormone-like hormone
acts_upstream_of_or_within
ISO
MGI:2154515 (PMID:15162506)
RGD
PMID:15162506
NCBI chr 4:180,188,792...180,199,847
Ensembl chr 4:180,188,792...180,199,847
G
Rc3h2
ring finger and CCCH-type domains 2
acts_upstream_of_or_within
ISO
MGI:4364357 (PMID:23583643)
RGD
PMID:23583643
NCBI chr 3:21,121,531...21,186,711
Ensembl chr 3:21,110,679...21,179,933
G
Selenon
selenoprotein N
acts_upstream_of_or_within
ISO
(PMID:23325319)
RGD
PMID:23325319
NCBI chr 5:146,748,638...146,764,656
Ensembl chr 5:146,748,652...146,763,059
G
Sftpd
surfactant protein D
involved_in
ISS ISO
GO_REF:0000024 (PMID:9751757)
UniProt RGD
PMID:9751757
GO_REF:0000024
NCBI chr16:17,046,491...17,058,968
Ensembl chr16:17,046,483...17,059,927
G
Slc7a11
solute carrier family 7 member 11
acts_upstream_of_or_within
ISO
MGI:3608695 (PMID:23085521)
RGD
PMID:23085521
NCBI chr 2:134,382,002...134,517,622
Ensembl chr 2:133,963,107...134,517,536
G
Slfn4
schlafen family member 4
IEP
RGD
PMID:17911382
RGD:2304247
NCBI chr10:67,994,601...68,018,141
Ensembl chr10:68,000,028...68,018,138 Ensembl chr10:68,000,028...68,018,138
G
Smpd3
sphingomyelin phosphodiesterase 3
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1856877 (PMID:22945695)
Ensembl RGD
PMID:22945695
GO_REF:0000107
NCBI chr19:34,162,337...34,245,786
Ensembl chr19:34,162,341...34,245,749
G
Sox2
SRY-box transcription factor 2
acts_upstream_of_or_within
ISO
(PMID:18374910)
RGD
PMID:18374910
NCBI chr 2:117,536,929...117,539,340
Ensembl chr 2:117,536,929...117,539,338
G
Stk40
serine/threonine kinase 40
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:5496282 (PMID:23293024)
Ensembl RGD
PMID:23293024
GO_REF:0000107
NCBI chr 5:138,380,049...138,417,802
Ensembl chr 5:138,381,159...138,417,796
G
Stra6
signaling receptor and transporter of retinol STRA6
involved_in
ISO
(PMID:17273977)
RGD
PMID:17273977
NCBI chr 8:58,548,899...58,568,861
Ensembl chr 8:58,549,736...58,568,860
G
Tcf21
transcription factor 21
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:2148207 (PMID:10572052)
UniProt RGD
PMID:10572052
GO_REF:0000024
NCBI chr 1:22,701,353...22,704,212
Ensembl chr 1:22,701,353...22,704,202
G
Tgfb1
transforming growth factor, beta 1
acts_upstream_of_or_within
ISO
(PMID:12634787)
RGD
PMID:12634787
NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
G
Tgfb3
transforming growth factor, beta 3
involved_in
ISO
(PMID:7493022)
RGD
PMID:7493022
NCBI chr 6:105,704,058...105,726,661
Ensembl chr 6:105,704,236...105,726,564
G
Tmem38b
transmembrane protein 38B
acts_upstream_of_or_within
ISO
MGI:3716065 (PMID:19515693)
RGD
PMID:19515693
NCBI chr 5:68,460,304...68,496,026
Ensembl chr 5:68,460,304...68,496,025
G
Tmtc3
transmembrane O-mannosyltransferase targeting cadherins 3
acts_upstream_of_or_within
ISO
MGI:4124060 (PMID:21956870)
RGD
PMID:21956870
NCBI chr 7:35,264,886...35,310,010
Ensembl chr 7:35,264,892...35,310,385
G
Tns3
tensin 3
acts_upstream_of_or_within
ISO
MGI:3574415 (PMID:15733665)
RGD
PMID:15733665
NCBI chr14:83,173,649...83,405,671
Ensembl chr14:83,173,649...83,405,998
G
Vegfa
vascular endothelial growth factor A
IMP
RGD
PMID:16230500
RGD:1580552
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
G
Wnt5a
Wnt family member 5A
IEP
RGD
PMID:17911382
RGD:2304247
NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234
G
Zfp157
zinc finger protein 157
acts_upstream_of_or_within
ISO
MGI:4124834 (PMID:22588720)
RGD
PMID:22588720
NCBI chr12:16,248,230...16,279,459
Ensembl chr12:16,248,230...16,270,698
G
Ctnnb1
catenin beta 1
acts_upstream_of_or_within
ISO
MGI:2148569 (PMID:19805295)
RGD
PMID:19805295
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
G
Nfib
nuclear factor I/B
involved_in
ISS ISO
GO_REF:0000024 (PMID:21513708)
UniProt RGD
PMID:21513708
GO_REF:0000024
NCBI chr 5:96,759,208...96,974,001
Ensembl chr 5:96,764,653...96,975,479
G
Fosl2
FOS like 2, AP-1 transcription factor subunit
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3757560 (PMID:31135379)
Ensembl RGD
PMID:31135379
GO_REF:0000107
NCBI chr 6:24,297,898...24,319,219
Ensembl chr 6:24,300,956...24,320,034
G
Rxfp1
relaxin family peptide receptor 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3054831 (PMID:15256493)
Ensembl RGD
PMID:15256493
GO_REF:0000107
NCBI chr 2:164,772,270...164,893,484
Ensembl chr 2:164,774,799...164,893,412
G
Col6a1
collagen type VI alpha 1 chain
acts_upstream_of_or_within
ISO
MGI:2153356 (PMID:31837950)
RGD
PMID:31837950
NCBI chr20:11,906,105...11,924,599
Ensembl chr20:11,905,957...11,924,597
G
Ctnnb1
catenin beta 1
involved_in acts_upstream_of
IEA ISO
GO_REF:0000107 MGI:1858008|MGI:2445707|MGI:2679524 (PMID:16040629)
Ensembl RGD
PMID:16040629
GO_REF:0000107
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
G
Dhcr7
7-dehydrocholesterol reductase
acts_upstream_of_or_within
ISO
MGI:2387406 (PMID:15005800)
RGD
PMID:15005800
NCBI chr 1:199,015,081...199,031,055
Ensembl chr 1:199,015,081...199,031,055
G
Foxa1
forkhead box A1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1347476 (PMID:15668254)
Ensembl RGD
PMID:15668254
GO_REF:0000107
NCBI chr 6:75,099,907...75,136,534
Ensembl chr 6:75,103,503...75,136,188
G
Foxa2
forkhead box A2
acts_upstream_of_or_within
ISO
MGI:1347472 (PMID:15668254)
RGD
PMID:15668254
NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326
G
Grhl2
grainyhead-like transcription factor 2
involved_in
ISO
(PMID:22955271)
RGD
PMID:22955271
NCBI chr 7:68,400,287...68,530,269
Ensembl chr 7:68,400,477...68,530,258
G
Ppp3r1
protein phosphatase 3, regulatory subunit B, alpha
acts_upstream_of_or_within
ISO
MGI:3044031 (PMID:16998587)
RGD
PMID:16998587
NCBI chr14:91,556,743...91,606,391
Ensembl chr14:91,604,121...91,606,907
G
Pthlh
parathyroid hormone-like hormone
acts_upstream_of_or_within
ISO
MGI:2154515 (PMID:15162506)
RGD
PMID:15162506
NCBI chr 4:180,188,792...180,199,847
Ensembl chr 4:180,188,792...180,199,847
G
Sav1
salvador family WW domain containing protein 1
acts_upstream_of_or_within
ISO
MGI:3790763 (PMID:18369314)
RGD
PMID:18369314
NCBI chr 6:88,478,536...88,500,121
Ensembl chr 6:88,478,539...88,499,968
G
Sox9
SRY-box transcription factor 9
acts_upstream_of_or_within
ISO
(PMID:24191021)
RGD
PMID:24191021
NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
G
Tmem38b
transmembrane protein 38B
acts_upstream_of_or_within
ISO
MGI:3716065 (PMID:19515693)
RGD
PMID:19515693
NCBI chr 5:68,460,304...68,496,026
Ensembl chr 5:68,460,304...68,496,025
G
Yap1
Yes1 associated transcriptional regulator
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3053959|MGI:5316446 (PMID:25043473)
Ensembl RGD
PMID:25043473
GO_REF:0000107
NCBI chr 8:5,095,705...5,166,808
Ensembl chr 8:5,095,722...5,167,010
G
Creb1
cAMP responsive element binding protein 1
acts_upstream_of_or_within
ISO
MGI:4999627 (PMID:21408140)
RGD
PMID:21408140
NCBI chr 9:65,903,511...65,972,562
Ensembl chr 9:65,903,547...65,970,816
G
Errfi1
ERBB receptor feedback inhibitor 1
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:19710174) GO_REF:0000107
UniProt RGD Ensembl
PMID:19710174
GO_REF:0000024 GO_REF:0000107
NCBI chr 5:161,323,981...161,337,289
Ensembl chr 5:161,323,998...161,337,282
G
Fgf10
fibroblast growth factor 10
acts_upstream_of_or_within
ISO
(PMID:9740653)
RGD
PMID:9740653
NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866
G
Foxj1
forkhead box J1
involved_in
ISO IEA
(PMID:9530170) GO_REF:0000107
RGD Ensembl
PMID:9530170
GO_REF:0000107
NCBI chr10:101,566,299...101,570,370
Ensembl chr10:101,566,304...101,570,237
G
Hmga2
high mobility group AT-hook 2
acts_upstream_of_or_within
ISO
MGI:1858043 (PMID:24661562)
RGD
PMID:24661562
NCBI chr 7:55,877,145...55,998,813
Ensembl chr 7:55,880,112...55,994,784
G
Pkd1
polycystin 1, transient receptor potential channel interacting
involved_in
ISO
(PMID:11891195)
RGD
PMID:11891195
NCBI chr10:13,573,779...13,621,138
Ensembl chr10:13,573,021...13,621,128
G
Rcn3
reticulocalbin 3
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:26252542) GO_REF:0000107
UniProt RGD Ensembl
PMID:26252542
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:95,564,503...95,573,762
Ensembl chr 1:95,564,380...95,573,725
G
Shh
sonic hedgehog signaling molecule
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857796 (PMID:9731532)
Ensembl RGD
PMID:9731532
GO_REF:0000107
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
G
Wnt7b
Wnt family member 7B
acts_upstream_of_or_within
ISO
MGI:3793280 (PMID:18367557)
RGD
PMID:18367557
NCBI chr 7:116,634,817...116,679,459
Ensembl chr 7:116,634,814...116,679,581
G
Agr2
anterior gradient 2, protein disulphide isomerase family member
acts_upstream_of_or_within
ISO
(PMID:22675208)
RGD
PMID:22675208
NCBI chr 6:52,708,602...52,729,378
Ensembl chr 6:52,708,602...52,729,371
G
Hoxa5
homeo box A5
acts_upstream_of_or_within
ISO
MGI:2150397 (PMID:17003488)
RGD
PMID:17003488
NCBI chr 4:81,302,341...81,306,234
Ensembl chr 4:81,302,353...81,306,234
G
Spdef
SAM pointed domain containing ets transcription factor
acts_upstream_of_or_within
ISO
(PMID:17347682)
RGD
PMID:17347682
NCBI chr20:5,771,440...5,785,893
Ensembl chr20:5,771,441...5,785,893
G
Ggcx
gamma-glutamyl carboxylase
IEP
RGD
PMID:2717270
RGD:11040517
NCBI chr 4:104,469,737...104,485,631
Ensembl chr 4:104,469,765...104,487,063
G
Pdgfra
platelet derived growth factor receptor alpha
IMP
RGD
PMID:8879189
RGD:11087558
NCBI chr14:33,005,838...33,054,347
Ensembl chr14:33,005,839...33,054,335
G
Pdgfrb
platelet derived growth factor receptor beta
IMP
RGD
PMID:8879189
RGD:11087558
NCBI chr18:54,499,962...54,538,840
Ensembl chr18:54,499,964...54,538,843
G
Rspo2
R-spondin 2
acts_upstream_of_or_within
ISO
MGI:3045965 (PMID:18256198)
RGD
PMID:18256198
NCBI chr 7:74,096,378...74,239,398
Ensembl chr 7:74,103,090...74,238,933
G
Spry2
sprouty RTK signaling antagonist 2
acts_upstream_of_or_within
ISO
(PMID:11287183)
RGD
PMID:11287183
NCBI chr15:82,692,291...82,697,408
Ensembl chr15:82,692,143...82,698,009
G
Ctnnb1
catenin beta 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2148567|MGI:2148569 (PMID:19686689), (PMID:19805295)
Ensembl RGD
PMID:19686689 PMID:19805295
GO_REF:0000107
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
G
Wnt2
Wnt family member 2
acts_upstream_of_or_within
ISO
MGI:1261834 (PMID:19686689)
RGD
PMID:19686689
NCBI chr 4:46,328,408...46,374,673
Ensembl chr 4:46,333,998...46,374,402
G
Wnt2b
Wnt family member 2B
acts_upstream_of_or_within
ISO
MGI:98954 (PMID:19686689)
RGD
PMID:19686689
NCBI chr 2:192,454,226...192,468,599
Ensembl chr 2:192,453,824...192,470,308
G
Bmp4
bone morphogenetic protein 4
IEP
RGD
PMID:15991191
RGD:8916959
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
G
Gata4
GATA binding protein 4
acts_upstream_of_or_within
ISO
MGI:2386764 (PMID:17142311)
RGD
PMID:17142311
NCBI chr15:37,459,601...37,531,291
Ensembl chr15:37,459,601...37,505,636
G
Fgfr2
fibroblast growth factor receptor 2
acts_upstream_of_or_within
ISO
MGI:3629660 (PMID:16989802)
RGD
PMID:16989802
NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626
G
Foxf1
forkhead box F1
acts_upstream_of_or_within
ISO
MGI:1929432 (PMID:11493558)
RGD
PMID:11493558
NCBI chr19:49,153,949...49,157,741
Ensembl chr19:49,153,699...49,157,738
G
Grhl2
grainyhead-like transcription factor 2
acts_upstream_of_or_within
ISO
MGI:4942413 (PMID:21377456)
RGD
PMID:21377456
NCBI chr 7:68,400,287...68,530,269
Ensembl chr 7:68,400,477...68,530,258
G
Igf1
insulin-like growth factor 1
acts_upstream_of_or_within
ISO
MGI:1926485|MGI:96787 (PMID:16691571)
RGD
PMID:16691571
NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296
G
Lif
LIF, interleukin 6 family cytokine
acts_upstream_of_or_within involved_in
ISO IEA
MGI:96432 (PMID:16691571) GO_REF:0000107
RGD Ensembl
PMID:16691571
GO_REF:0000107
NCBI chr14:79,131,049...79,140,486
Ensembl chr14:79,134,574...79,140,482
G
Sec24b
SEC24 homolog B, COPII coat complex component
acts_upstream_of_or_within
ISO
MGI:4440621 (PMID:20215345)
RGD
PMID:20215345
NCBI chr 2:218,562,670...218,632,753
Ensembl chr 2:218,562,676...218,632,699
G
Shh
sonic hedgehog signaling molecule
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857796 (PMID:9731532)
Ensembl RGD
PMID:9731532
GO_REF:0000107
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
G
Tgfbr2
transforming growth factor, beta receptor 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2384513 (PMID:18990706)
Ensembl RGD
PMID:18990706
GO_REF:0000107
NCBI chr 8:115,794,537...115,883,615
Ensembl chr 8:115,794,537...115,883,228
G
Ap3b1
adaptor related protein complex 3 subunit beta 1
acts_upstream_of_or_within
ISO
MGI:2177763 (PMID:12777251)
RGD
PMID:12777251
NCBI chr 2:25,600,069...25,800,937
Ensembl chr 2:25,600,040...25,800,935
G
Bmp4
bone morphogenetic protein 4
acts_upstream_of_or_within
ISO
(PMID:8674409)
RGD
PMID:8674409
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
G
Col6a1
collagen type VI alpha 1 chain
acts_upstream_of_or_within
ISO
MGI:2153356 (PMID:31837950)
RGD
PMID:31837950
NCBI chr20:11,906,105...11,924,599
Ensembl chr20:11,905,957...11,924,597
G
Dspp
dentin sialophosphoprotein
acts_upstream_of_or_within
ISO
MGI:2653208 (PMID:16937369)
RGD
PMID:16937369
NCBI chr14:5,565,562...5,571,669
Ensembl chr14:5,565,629...5,571,672
G
Fgf10
fibroblast growth factor 10
acts_upstream_of_or_within
ISO
MGI:1859647|MGI:3629660 (PMID:15800000)
RGD
PMID:15800000
NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866
G
Fgf8
fibroblast growth factor 8
acts_upstream_of_or_within
ISO
MGI:1857843 (PMID:10411502)
RGD
PMID:10411502
NCBI chr 1:244,584,477...244,590,578
Ensembl chr 1:244,584,652...244,590,359
G
Foxa1
forkhead box A1
acts_upstream_of_or_within
ISO
MGI:2653543 (PMID:16214823)
RGD
PMID:16214823
NCBI chr 6:75,099,907...75,136,534
Ensembl chr 6:75,103,503...75,136,188
G
Foxf1
forkhead box F1
acts_upstream_of_or_within
ISO
MGI:1929432 (PMID:11493558)
RGD
PMID:11493558
NCBI chr19:49,153,949...49,157,741
Ensembl chr19:49,153,699...49,157,738
G
Hipk2
homeodomain interacting protein kinase 2
acts_upstream_of_or_within
ISO
MGI:96160 (PMID:31582725)
RGD
PMID:31582725
NCBI chr 4:67,439,327...67,619,223
Ensembl chr 4:67,440,501...67,619,223
G
Hmga1
high mobility group AT-hook 1
acts_upstream_of_or_within
ISO
MGI:1314872 (PMID:31582725)
RGD
PMID:31582725
NCBI chr20:5,611,088...5,618,755
Ensembl chr20:5,611,694...5,618,752
G
Hps1
HPS1, biogenesis of lysosomal organelles complex 3 subunit 1
acts_upstream_of_or_within
ISO
MGI:1333879 (PMID:12777251)
RGD
PMID:12777251
NCBI chr 1:241,551,180...241,577,292
Ensembl chr 1:241,551,175...241,577,268
G
Id1
inhibitor of DNA binding 1
acts_upstream_of_or_within
ISO
MGI:2679939 (PMID:17717145)
RGD
PMID:17717145
NCBI chr 3:141,210,666...141,212,420
Ensembl chr 3:141,211,267...141,212,419
G
Map2k1
mitogen activated protein kinase kinase 1
acts_upstream_of_or_within
ISO
MGI:1346867 (PMID:25100655)
RGD
PMID:25100655
NCBI chr 8:64,683,449...64,754,900
Ensembl chr 8:64,683,449...64,755,147
G
Map2k2
mitogen activated protein kinase kinase 2
acts_upstream_of_or_within
ISO
MGI:1346866 (PMID:25100655)
RGD
PMID:25100655
NCBI chr 7:8,590,729...8,610,279
Ensembl chr 7:8,580,905...8,610,243
G
Mapk1
mitogen activated protein kinase 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1346859 (PMID:25100655)
Ensembl RGD
PMID:25100655
GO_REF:0000107
NCBI chr11:97,462,025...97,529,193
Ensembl chr11:83,957,813...84,023,616
G
Mapk3
mitogen activated protein kinase 3
acts_upstream_of_or_within
ISO
MGI:1346858 (PMID:25100655)
RGD
PMID:25100655
NCBI chr 1:190,797,189...190,803,411
Ensembl chr 1:181,366,637...181,372,863
G
Mapk8ip3
mitogen-activated protein kinase 8 interacting protein 3
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3527900 (PMID:18324732)
Ensembl RGD
PMID:18324732
GO_REF:0000107
NCBI chr10:13,918,417...13,958,335
Ensembl chr10:13,918,400...13,958,273
G
Nog
noggin
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1862000 (PMID:16712836)
Ensembl RGD
PMID:16712836
GO_REF:0000107
NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339
G
Plod3
procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3620603 (PMID:16467571)
Ensembl RGD
PMID:16467571
GO_REF:0000107
NCBI chr12:19,676,384...19,686,945
Ensembl chr12:19,676,386...19,686,960
G
Rpl13a
ribosomal protein L13A
acts_upstream_of_or_within
ISO
MGI:5502322 (PMID:23460747)
RGD
PMID:23460747
NCBI chr 1:95,609,374...95,612,557
Ensembl chr 1:95,609,370...95,620,463
G
Sec24b
SEC24 homolog B, COPII coat complex component
acts_upstream_of_or_within
ISO
MGI:4440621 (PMID:20215345)
RGD
PMID:20215345
NCBI chr 2:218,562,670...218,632,753
Ensembl chr 2:218,562,676...218,632,699
G
Shh
sonic hedgehog signaling molecule
acts_upstream_of_or_within
ISO
MGI:1857796 (PMID:10500184)
RGD
PMID:10500184
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
G
Sox11
SRY-box transcription factor 11
involved_in
ISS ISO
GO_REF:0000024 (PMID:15254231)
UniProt RGD
PMID:15254231
GO_REF:0000024
NCBI chr 6:44,008,333...44,010,354
Ensembl chr 6:44,008,340...44,010,354
G
Spry2
sprouty RTK signaling antagonist 2
acts_upstream_of_or_within
ISO
(PMID:11287183)
RGD
PMID:11287183
NCBI chr15:82,692,291...82,697,408
Ensembl chr15:82,692,143...82,698,009
G
Srf
serum response factor
acts_upstream_of_or_within
ISO
MGI:3522206 (PMID:24218621)
RGD
PMID:24218621
NCBI chr 9:14,426,453...14,435,734
Ensembl chr 9:14,426,472...14,435,733
G
Stk40
serine/threonine kinase 40
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:5496282 (PMID:23293024)
Ensembl RGD
PMID:23293024
GO_REF:0000107
NCBI chr 5:138,380,049...138,417,802
Ensembl chr 5:138,381,159...138,417,796
G
Tcf21
transcription factor 21
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:2148207 (PMID:10572052)
UniProt RGD
PMID:10572052
GO_REF:0000024
NCBI chr 1:22,701,353...22,704,212
Ensembl chr 1:22,701,353...22,704,202
G
Tgfbr2
transforming growth factor, beta receptor 2
acts_upstream_of_or_within
ISO
MGI:2384513 (PMID:18990706)
RGD
PMID:18990706
NCBI chr 8:115,794,537...115,883,615
Ensembl chr 8:115,794,537...115,883,228
G
Wnt7b
Wnt family member 7B
acts_upstream_of_or_within
ISO
MGI:3793280 (PMID:18367557)
RGD
PMID:18367557
NCBI chr 7:116,634,817...116,679,459
Ensembl chr 7:116,634,814...116,679,581
G
Ascl1
achaete-scute family bHLH transcription factor 1
acts_upstream_of_or_within
ISO
MGI:1857470 (PMID:9126746)
RGD
PMID:9126746
NCBI chr 7:21,903,136...21,906,003
Ensembl chr 7:21,903,126...21,905,993
G
Fgf10
fibroblast growth factor 10
acts_upstream_of_or_within
ISO
(PMID:15531758)
RGD
PMID:15531758
NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866
G
Asxl1
ASXL transcriptional regulator 1
acts_upstream_of_or_within
ISO
MGI:4431878 (PMID:24860998)
RGD
PMID:24860998
NCBI chr 3:141,814,012...141,881,526
Ensembl chr 3:141,813,433...141,881,538
G
Creb1
cAMP responsive element binding protein 1
acts_upstream_of_or_within
ISO
MGI:4999627 (PMID:21408140)
RGD
PMID:21408140
NCBI chr 9:65,903,511...65,972,562
Ensembl chr 9:65,903,547...65,970,816
G
Fgf10
fibroblast growth factor 10
involved_in
ISO
(PMID:17071719)
RGD
PMID:17071719
NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866
G
Gata6
GATA binding protein 6
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:108067 (PMID:17164424)
Ensembl RGD
PMID:17164424
GO_REF:0000107
NCBI chr18:2,188,121...2,219,532
Ensembl chr18:2,188,121...2,219,532
G
Ltbp3
latent transforming growth factor beta binding protein 3
acts_upstream_of_or_within
ISO
MGI:2180017 (PMID:16049328)
RGD
PMID:16049328
NCBI chr 1:203,029,412...203,045,975
Ensembl chr 1:203,029,877...203,045,975
G
Nkx2-1
NK2 homeobox 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:107516 (PMID:17164424)
Ensembl RGD
PMID:17164424
GO_REF:0000107
NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791
G
Ptges3
prostaglandin E synthase 3
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3701300 (PMID:17438133)
Ensembl RGD
PMID:17438133
GO_REF:0000107
NCBI chr 7:490,698...507,759
Ensembl chr 7:490,656...508,084
G
Tnrc6c
trinucleotide repeat containing adaptor 6C
acts_upstream_of_or_within
ISO
MGI:4001992 (PMID:28811219)
RGD
PMID:28811219
NCBI chr10:102,908,958...102,979,543
Ensembl chr10:102,868,828...102,978,194
G
Foxp1
forkhead box P1
acts_upstream_of_or_within
ISO
MGI:1921373 (PMID:22675208)
RGD
PMID:22675208
NCBI chr 4:131,559,599...132,155,092
Ensembl chr 4:131,564,756...132,112,258
G
Foxp4
forkhead box P4
acts_upstream_of_or_within
ISO
MGI:1914004 (PMID:22675208)
RGD
PMID:22675208
NCBI chr 9:13,058,506...13,115,406
Ensembl chr 9:13,058,476...13,114,879
G
Sox9
SRY-box transcription factor 9
acts_upstream_of_or_within
ISO
MGI:2429649 (PMID:24218621)
RGD
PMID:24218621
NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
G
Srf
serum response factor
acts_upstream_of_or_within
ISO
MGI:3522206 (PMID:24218621)
RGD
PMID:24218621
NCBI chr 9:14,426,453...14,435,734
Ensembl chr 9:14,426,472...14,435,733
G
Bmp2
bone morphogenetic protein 2
involved_in
ISO ISS
(PMID:17992660) GO_REF:0000024
RGD UniProt
PMID:17992660
GO_REF:0000024
NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
G
Bmp4
bone morphogenetic protein 4
involved_in
ISO IEA ISS
(PMID:17992660) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:17992660
GO_REF:0000024 GO_REF:0000107
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
G
Bmpr2
bone morphogenetic protein receptor type 2
involved_in
ISO
(PMID:17992660)
RGD
PMID:17992660
NCBI chr 9:61,192,718...61,307,280
Ensembl chr 9:61,190,566...61,301,809
G
Errfi1
ERBB receptor feedback inhibitor 1
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:19710174) GO_REF:0000107
UniProt RGD Ensembl
PMID:19710174
GO_REF:0000024 GO_REF:0000107
NCBI chr 5:161,323,981...161,337,289
Ensembl chr 5:161,323,998...161,337,282
G
Foxf1
forkhead box F1
involved_in
ISO
(PMID:19500772)
RGD
PMID:19500772
NCBI chr19:49,153,949...49,157,741
Ensembl chr19:49,153,699...49,157,738
G
Id1
inhibitor of DNA binding 1
acts_upstream_of_or_within
ISO
MGI:2679939 (PMID:17717145)
RGD
PMID:17717145
NCBI chr 3:141,210,666...141,212,420
Ensembl chr 3:141,211,267...141,212,419
G
Ift88
intraflagellar transport 88
acts_upstream_of_or_within
ISO
MGI:3823090 (PMID:19036983)
RGD
PMID:19036983
NCBI chr15:31,573,325...31,666,068
Ensembl chr15:31,573,376...31,672,147
G
Igf1
insulin-like growth factor 1
acts_upstream_of_or_within
ISO
MGI:1926485|MGI:96787 (PMID:16691571)
RGD
PMID:16691571
NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296
G
Lif
LIF, interleukin 6 family cytokine
acts_upstream_of_or_within involved_in
ISO IEA
MGI:96432 (PMID:16691571) GO_REF:0000107
RGD Ensembl
PMID:16691571
GO_REF:0000107
NCBI chr14:79,131,049...79,140,486
Ensembl chr14:79,134,574...79,140,482
G
Stra6
signaling receptor and transporter of retinol STRA6
involved_in
ISO IEA
(PMID:17273977) GO_REF:0000107
RGD Ensembl
PMID:17273977
GO_REF:0000107
NCBI chr 8:58,548,899...58,568,861
Ensembl chr 8:58,549,736...58,568,860
G
Tcf21
transcription factor 21
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:2148207 (PMID:10572052)
UniProt RGD
PMID:10572052
GO_REF:0000024
NCBI chr 1:22,701,353...22,704,212
Ensembl chr 1:22,701,353...22,704,202
G
Vegfa
vascular endothelial growth factor A
acts_upstream_of_or_within
ISO
(PMID:11169844)
RGD
PMID:11169844
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
G
Ctnnb1
catenin beta 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2148567 (PMID:18533146)
Ensembl RGD
PMID:18533146
GO_REF:0000107
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
G
Dppa2
developmental pluripotency-associated 2
acts_upstream_of_or_within
ISO
MGI:2157525|MGI:5298642 (PMID:21896782)
RGD
PMID:21896782
NCBI chr11:52,549,024...52,556,740
Ensembl chr11:52,549,651...52,556,740
G
Dppa4
developmental pluripotency associated 4
acts_upstream_of_or_within
ISO
MGI:2157523|MGI:5298639 (PMID:21896782)
RGD
PMID:21896782
NCBI chr11:52,570,279...52,578,779
Ensembl chr11:52,570,286...52,578,797
G
Fgf9
fibroblast growth factor 9
acts_upstream_of_or_within
ISO
MGI:2135961 (PMID:18533146)
RGD
PMID:18533146
NCBI chr15:32,208,993...32,254,952
Ensembl chr15:32,210,074...32,253,309
G
Fgfr1
Fibroblast growth factor receptor 1
acts_upstream_of_or_within
ISO
MGI:95523 (PMID:18533146)
RGD
PMID:18533146
NCBI chr16:66,491,930...66,547,161
Ensembl chr16:66,494,042...66,547,350
G
Fgfr2
fibroblast growth factor receptor 2
acts_upstream_of_or_within
ISO
MGI:3629660|MGI:95522 (PMID:16989802), (PMID:18533146)
RGD
PMID:16989802 PMID:18533146
NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626
G
Hoxa5
homeo box A5
acts_upstream_of_or_within
ISO
MGI:2150397 (PMID:9441679)
RGD
PMID:9441679
NCBI chr 4:81,302,341...81,306,234
Ensembl chr 4:81,302,353...81,306,234
G
Ptk7
protein tyrosine kinase 7
acts_upstream_of_or_within
ISO
MGI:3640803 (PMID:20704721)
RGD
PMID:20704721
NCBI chr 9:14,352,155...14,418,473
Ensembl chr 9:14,351,202...14,418,494
G
Shh
sonic hedgehog signaling molecule
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857796 (PMID:9731532)
Ensembl RGD
PMID:9731532
GO_REF:0000107
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
G
Wnt11
Wnt family member 11
involved_in
ISO
(PMID:9757009)
RGD
PMID:9757009
NCBI chr 1:153,134,503...153,154,294
Ensembl chr 1:153,138,197...153,154,294
G
Wnt7b
Wnt family member 7B
acts_upstream_of_or_within
ISO
MGI:3793280 (PMID:18367557)
RGD
PMID:18367557
NCBI chr 7:116,634,817...116,679,459
Ensembl chr 7:116,634,814...116,679,581
G
Fgf10
fibroblast growth factor 10
acts_upstream_of_or_within
ISO
MGI:95523 (PMID:16989802)
RGD
PMID:16989802
NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866
G
Fgfr2
fibroblast growth factor receptor 2
acts_upstream_of_or_within
ISO
MGI:1099809 (PMID:16989802)
RGD
PMID:16989802
NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626
G
Ctnnb1
catenin beta 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2148567 (PMID:17128274), (PMID:18231602)
Ensembl RGD
PMID:17128274 PMID:18231602
GO_REF:0000107
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
G
Fgfr2
fibroblast growth factor receptor 2
acts_upstream_of_or_within
ISO
MGI:3629660 (PMID:16989802)
RGD
PMID:16989802
NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626
G
Phf14
PHD finger protein 14
acts_upstream_of
ISO
MGI:5426539 (PMID:22730381)
RGD
PMID:22730381
NCBI chr 4:40,009,691...40,195,877
Ensembl chr 4:40,009,264...40,195,885
G
Shh
sonic hedgehog signaling molecule
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:9006067)
Ensembl RGD
PMID:9006067
GO_REF:0000107
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
G
Tbx2
T-box transcription factor 2
involved_in
ISO
(PMID:27720610)
RGD
PMID:27720610
NCBI chr10:70,679,670...70,688,868
Ensembl chr10:70,679,518...70,688,529
G
Fgf10
fibroblast growth factor 10
acts_upstream_of_or_within
ISO
(PMID:15531758)
RGD
PMID:15531758
NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866
G
Tnf
tumor necrosis factor
involved_in
ISO
(PMID:17350185)
RGD
PMID:17350185
NCBI chr20:3,626,685...3,629,303
Ensembl chr20:3,622,011...3,624,629
G
Nfib
nuclear factor I/B
involved_in
ISS ISO
GO_REF:0000024 (PMID:21513708)
UniProt RGD
PMID:21513708
GO_REF:0000024
NCBI chr 5:96,759,208...96,974,001
Ensembl chr 5:96,764,653...96,975,479
G
Foxp1
forkhead box P1
acts_upstream_of_or_within
ISO
MGI:1921373 (PMID:22675208)
RGD
PMID:22675208
NCBI chr 4:131,559,599...132,155,092
Ensembl chr 4:131,564,756...132,112,258
G
Foxp4
forkhead box P4
acts_upstream_of_or_within
ISO
MGI:1914004 (PMID:22675208)
RGD
PMID:22675208
NCBI chr 9:13,058,506...13,115,406
Ensembl chr 9:13,058,476...13,114,879
G
Nfib
nuclear factor I/B
involved_in
ISS ISO
GO_REF:0000024 (PMID:21513708)
UniProt RGD
PMID:21513708
GO_REF:0000024
NCBI chr 5:96,759,208...96,974,001
Ensembl chr 5:96,764,653...96,975,479
G
Phf14
PHD finger protein 14
acts_upstream_of_or_within
ISO
MGI:5426539 (PMID:22730381)
RGD
PMID:22730381
NCBI chr 4:40,009,691...40,195,877
Ensembl chr 4:40,009,264...40,195,885
G
Celsr1
cadherin, EGF LAG seven-pass G-type receptor 1
acts_upstream_of_or_within
ISO
MGI:2668337 (PMID:20223754)
RGD
PMID:20223754
NCBI chr 7:116,987,616...117,125,035
Ensembl chr 7:116,987,605...117,125,164
G
Vangl2
VANGL planar cell polarity protein 2
acts_upstream_of_or_within
ISO
MGI:1857642 (PMID:20223754)
RGD
PMID:20223754
NCBI chr13:84,462,731...84,489,404
Ensembl chr13:84,465,527...84,489,378
G
Celsr1
cadherin, EGF LAG seven-pass G-type receptor 1
acts_upstream_of_or_within
ISO
MGI:2668337 (PMID:20223754)
RGD
PMID:20223754
NCBI chr 7:116,987,616...117,125,035
Ensembl chr 7:116,987,605...117,125,164
G
Vangl2
VANGL planar cell polarity protein 2
acts_upstream_of_or_within
ISO
MGI:1857642 (PMID:20223754)
RGD
PMID:20223754
NCBI chr13:84,462,731...84,489,404
Ensembl chr13:84,465,527...84,489,378
G
Bmp4
bone morphogenetic protein 4
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:17350185) GO_REF:0000024
Ensembl RGD UniProt
PMID:17350185
GO_REF:0000024 GO_REF:0000107
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
G
Ctnnb1
catenin beta 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2148567 (PMID:18533146)
Ensembl RGD
PMID:18533146
GO_REF:0000107
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
G
Pdgfra
platelet derived growth factor receptor alpha
IMP
RGD
PMID:8879189
RGD:11087558
NCBI chr14:33,005,838...33,054,347
Ensembl chr14:33,005,839...33,054,335
G
Cdc42
cell division cycle 42
involved_in
ISO
(PMID:23219958)
RGD
PMID:23219958
NCBI chr 5:149,555,069...149,593,239
Ensembl chr 5:149,553,724...149,593,111
G
Fgf7
fibroblast growth factor 7
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:9740653) GO_REF:0000107
RGD Ensembl
PMID:9740653
GO_REF:0000107
NCBI chr 3:113,280,448...113,333,279
Ensembl chr 3:113,281,283...113,332,929
G
Fgfr2
fibroblast growth factor receptor 2
acts_upstream_of_or_within
ISO
MGI:3629660 (PMID:16989802)
RGD
PMID:16989802
NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626
G
Foxp2
forkhead box P2
acts_upstream_of_or_within
ISO
MGI:1914004 (PMID:17428829)
RGD
PMID:17428829
NCBI chr 4:43,133,827...43,712,442
Ensembl chr 4:43,133,912...43,711,683
G
Hmga2
high mobility group AT-hook 2
acts_upstream_of_or_within
ISO
MGI:1858043 (PMID:24661562)
RGD
PMID:24661562
NCBI chr 7:55,877,145...55,998,813
Ensembl chr 7:55,880,112...55,994,784
G
Srsf6
serine and arginine rich splicing factor 6
acts_upstream_of_or_within
ISO
(PMID:23132731)
RGD
PMID:23132731
NCBI chr 3:151,589,546...151,594,869
Ensembl chr 3:151,589,535...151,594,860
G
Wnt2
Wnt family member 2
acts_upstream_of_or_within
ISO
MGI:4361155 (PMID:19686689)
RGD
PMID:19686689
NCBI chr 4:46,328,408...46,374,673
Ensembl chr 4:46,333,998...46,374,402
G
Epas1
endothelial PAS domain protein 1
IEP
RGD
PMID:23962064
RGD:10395379
NCBI chr 6:7,790,236...7,871,717
Ensembl chr 6:7,790,647...7,871,228
G
Foxj1
forkhead box J1
involved_in
ISO IEA
(PMID:20539013) GO_REF:0000107
RGD Ensembl
PMID:20539013
GO_REF:0000107
NCBI chr10:101,566,299...101,570,370
Ensembl chr10:101,566,304...101,570,237
G
Tp73
tumor protein p73
involved_in
ISO
(PMID:34077761)
RGD
PMID:34077761
NCBI chr 5:164,621,377...164,703,958
Ensembl chr 5:164,621,377...164,681,128
G
Hhex
hematopoietically expressed homeobox
acts_upstream_of_or_within
ISO
MGI:2177762 (PMID:16364283)
RGD
PMID:16364283
NCBI chr 1:235,190,455...235,196,042
Ensembl chr 1:235,190,455...235,196,042
G
Rdh10
retinol dehydrogenase 10
acts_upstream_of_or_within
ISO
(PMID:17473173)
RGD
PMID:17473173
NCBI chr 5:3,186,671...3,215,572
Ensembl chr 5:3,188,445...3,215,572
G
Sox9
SRY-box transcription factor 9
acts_upstream_of_or_within
ISO
(PMID:24191021)
RGD
PMID:24191021
NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
G
Sox9
SRY-box transcription factor 9
acts_upstream_of_or_within
ISO
(PMID:24191021)
RGD
PMID:24191021
NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
G
Foxp1
forkhead box P1
acts_upstream_of_or_within
ISO
MGI:1344405|MGI:1921373 (PMID:22675208)
RGD
PMID:22675208
NCBI chr 4:131,559,599...132,155,092
Ensembl chr 4:131,564,756...132,112,258
G
Foxp4
forkhead box P4
acts_upstream_of_or_within
ISO
MGI:1344405|MGI:1914004 (PMID:22675208)
RGD
PMID:22675208
NCBI chr 9:13,058,506...13,115,406
Ensembl chr 9:13,058,476...13,114,879
G
Shh
sonic hedgehog signaling molecule
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857796 (PMID:10500184)
Ensembl RGD
PMID:10500184
GO_REF:0000107
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
G
Foxf1
forkhead box F1
acts_upstream_of_or_within
ISO
MGI:1929432 (PMID:11493558)
RGD
PMID:11493558
NCBI chr19:49,153,949...49,157,741
Ensembl chr19:49,153,699...49,157,738
G
Fgf10
fibroblast growth factor 10
involved_in
ISO
(PMID:10541313)
RGD
PMID:10541313
NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866
G
Fgf7
fibroblast growth factor 7
involved_in
ISO IEA
(PMID:10541313) GO_REF:0000107
RGD Ensembl
PMID:10541313
GO_REF:0000107
NCBI chr 3:113,280,448...113,333,279
Ensembl chr 3:113,281,283...113,332,929
G
Tmem38b
transmembrane protein 38B
acts_upstream_of_or_within
ISO
MGI:3716065 (PMID:19515693)
RGD
PMID:19515693
NCBI chr 5:68,460,304...68,496,026
Ensembl chr 5:68,460,304...68,496,025
G
Ext1
exostosin glycosyltransferase 1
acts_upstream_of_or_within
ISO
(PMID:28859094)
RGD
PMID:28859094
NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357
G
Creb1
cAMP responsive element binding protein 1
acts_upstream_of_or_within
ISO
MGI:4999627 (PMID:21408140)
RGD
PMID:21408140
NCBI chr 9:65,903,511...65,972,562
Ensembl chr 9:65,903,547...65,970,816
G
Igf1
insulin-like growth factor 1
acts_upstream_of_or_within
ISO
MGI:1926485 (PMID:16691571)
RGD
PMID:16691571
NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296
G
Klf2
KLF transcription factor 2
acts_upstream_of_or_within
ISO
(PMID:22001906)
RGD
PMID:22001906
NCBI chr16:17,521,107...17,523,739
Ensembl chr16:17,514,552...17,523,944
G
Kras
KRAS proto-oncogene, GTPase
acts_upstream_of
ISO
(PMID:24058167)
RGD
PMID:24058167
NCBI chr 4:178,185,418...178,218,484
G
Lta4h
leukotriene A4 hydrolase
IEP
RGD
PMID:15805137
RGD:2316585
NCBI chr 7:27,969,796...28,001,600
Ensembl chr 7:27,969,789...28,001,600
G
Ncor2
nuclear receptor co-repressor 2
acts_upstream_of_or_within
ISO
MGI:3829987|MGI:98742|MGI:98743 (PMID:22001906)
RGD
PMID:22001906
NCBI chr12:31,466,418...31,628,319
Ensembl chr12:31,466,412...31,628,319
G
Nfib
nuclear factor I/B
involved_in
ISS ISO
GO_REF:0000024 (PMID:21513708)
UniProt RGD
PMID:21513708
GO_REF:0000024
NCBI chr 5:96,759,208...96,974,001
Ensembl chr 5:96,764,653...96,975,479
G
Sox9
SRY-box transcription factor 9
acts_upstream_of
ISO
MGI:2385468 (PMID:24058167)
RGD
PMID:24058167
NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
G
Thra
thyroid hormone receptor alpha
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1337080|MGI:98743 (PMID:22001906)
Ensembl RGD
PMID:22001906
GO_REF:0000107
NCBI chr10:83,701,885...83,729,408
Ensembl chr10:83,700,755...83,729,936
G
Thrb
thyroid hormone receptor beta
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1337080|MGI:98742 (PMID:22001906)
Ensembl RGD
PMID:22001906
GO_REF:0000107
NCBI chr15:7,685,180...8,031,920
Ensembl chr15:7,685,180...7,882,916
G
Aimp2
aminoacyl tRNA synthetase complex-interacting multifunctional protein 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3497919 (PMID:12819782)
Ensembl RGD
PMID:12819782
GO_REF:0000107
NCBI chr12:10,701,194...10,710,772
Ensembl chr12:10,701,194...10,710,769
G
Fgf10
fibroblast growth factor 10
acts_upstream_of_or_within
ISO
(PMID:15531758)
RGD
PMID:15531758
NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866
G
Fndc3b
fibronectin type III domain containing 3B
acts_upstream_of_or_within
ISO
MGI:4822558 (PMID:21704616)
RGD
PMID:21704616
NCBI chr 2:110,311,439...110,617,504
Ensembl chr 2:110,312,694...110,547,830
G
Gata6
GATA binding protein 6
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:108067 (PMID:17164424)
Ensembl RGD
PMID:17164424
GO_REF:0000107
NCBI chr18:2,188,121...2,219,532
Ensembl chr18:2,188,121...2,219,532
G
Igf1
insulin-like growth factor 1
acts_upstream_of_or_within
ISO
MGI:1926485 (PMID:16691571)
RGD
PMID:16691571
NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296
G
Nfib
nuclear factor I/B
involved_in
ISS ISO
GO_REF:0000024 (PMID:21513708)
UniProt RGD
PMID:21513708
GO_REF:0000024
NCBI chr 5:96,759,208...96,974,001
Ensembl chr 5:96,764,653...96,975,479
G
Nkx2-1
NK2 homeobox 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:107516 (PMID:17164424)
Ensembl RGD
PMID:17164424
GO_REF:0000107
NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791
G
Rbbp9
RB binding protein 9, serine hydrolase
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:32484881)
Ensembl RGD
PMID:32484881
GO_REF:0000107
NCBI chr 3:131,925,095...131,939,042
Ensembl chr 3:131,925,341...131,932,156
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