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ONTOLOGY REPORT - ANNOTATIONS

Term:polysaccharide binding
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Accession:GO:0030247 term browser browse the term
Definition:Binding to a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.
Synonyms:narrow_synonym: polysaccharide assembly with MHC class II protein complex
 alt_id: GO:0002506


show annotations for term's descendants           Sort by:
polysaccharide binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agl amylo-alpha-1,6-glucosidase and 4-alpha-glucanotransferase enables ISO (PMID:17908927) RGD PMID:17908927 NCBI chr 2:204,705,053...204,760,966
Ensembl chr 2:204,705,053...204,760,828 		JBrowse link
G Clec18a C-type lectin domain family 18, member A enables ISO
IBA		 (PMID:26170455)
GO_REF:0000033		 RGD
GO_Central		 PMID:26170455 GO_REF:0000033 NCBI chr19:39,038,498...39,053,425
Ensembl chr19:39,038,273...39,056,017 		JBrowse link
G Clec4g C-type lectin domain family 4, member G enables ISO (PMID:19632227) RGD PMID:19632227 NCBI chr12:1,780,370...1,785,027
Ensembl chr12:1,780,371...1,784,985 		JBrowse link
G Clec4m C-type lectin domain family 4 member M enables ISO (PMID:14707091) RGD PMID:14707091 NCBI chr12:1,915,902...1,924,529
Ensembl chr12:1,915,919...1,924,539 		JBrowse link
G Clec7a C-type lectin domain containing 7A enables ISO (PMID:12163569), (PMID:12719478), (PMID:14707091) RGD PMID:12163569 PMID:12719478 PMID:14707091 NCBI chr 4:162,902,731...162,913,931
Ensembl chr 4:162,902,732...162,913,897 		JBrowse link
G Endou endonuclease, poly(U)-specific enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:128,844,872...128,866,572
Ensembl chr 7:128,844,862...128,866,596 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715 		JBrowse link
G Enpp2 ectonucleotide pyrophosphatase/phosphodiesterase 2 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:86,202,345...86,325,050
Ensembl chr 7:86,202,350...86,324,827 		JBrowse link
G Epm2a EPM2A glucan phosphatase, laforin enables ISO (PMID:15102711) RGD PMID:15102711 NCBI chr 1:5,727,111...5,845,338
Ensembl chr 1:5,727,066...5,920,555 		JBrowse link
G Mbl1 mannose binding lectin 1 IDA RGD PMID:16272342 RGD:1582134 NCBI chr16:17,029,146...17,035,187
Ensembl chr16:17,029,118...17,035,174 		JBrowse link
G Prg4 proteoglycan 4 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr13:62,487,257...62,504,657
Ensembl chr13:62,487,257...62,504,119 		JBrowse link
G RT1-Da RT1 class II, locus Da enables ISO (PMID:21502329) RGD PMID:21502329 NCBI chr20:4,513,464...4,518,457
Ensembl chr20:4,512,911...4,518,455 		JBrowse link
G RT1-Db1 RT1 class II, locus Db1 enables ISO (PMID:21502329) RGD PMID:21502329 NCBI chr20:4,548,664...4,558,237
Ensembl chr20:4,548,666...4,558,258 		JBrowse link
G Stbd1 starch binding domain 1 enables ISO (PMID:24837458) RGD PMID:24837458 NCBI chr14:15,470,452...15,473,857
Ensembl chr14:15,469,582...15,477,443 		JBrowse link
G Vtn vitronectin enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:63,394,732...63,397,812
Ensembl chr10:63,394,719...63,397,810 		JBrowse link
(1->3)-beta-D-glucan binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec4m C-type lectin domain family 4 member M enables ISO (PMID:14707091) RGD PMID:14707091 NCBI chr12:1,915,902...1,924,529
Ensembl chr12:1,915,919...1,924,539 		JBrowse link
G Clec7a C-type lectin domain containing 7A enables ISO
IBA		 (PMID:22267217), (PMID:24721111)
(PMID:12163569), (PMID:14698225), (PMID:14707091), (PMID:15213161), (PMID:17159984)
GO_REF:0000033		 RGD
GO_Central		 PMID:12163569 PMID:14698225 PMID:14707091 PMID:15213161 PMID:17159984 More... GO_REF:0000033 NCBI chr 4:162,902,731...162,913,931
Ensembl chr 4:162,902,732...162,913,897 		JBrowse link
G Klrh1 killer cell lectin-like receptor subfamily H, member 1 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:163,288,228...163,301,977
Ensembl chr 4:163,288,229...163,300,535 		JBrowse link
G Ptx3 pentraxin 3 enables ISO (PMID:14726497) RGD PMID:14726497 NCBI chr 2:150,487,513...150,493,323
Ensembl chr 2:150,487,513...150,493,323 		JBrowse link
glycogen binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epm2a EPM2A glucan phosphatase, laforin NOT|enables ISO
IEA
ISS		 (PMID:18617530)
GO_REF:0000107
GO_REF:0000024
(PMID:11739371), (PMID:25544560)		 RGD
Ensembl
UniProt		 PMID:11739371 PMID:18617530 PMID:25544560 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:5,727,111...5,845,338
Ensembl chr 1:5,727,066...5,920,555 		JBrowse link
G Ppp1r3a protein phosphatase 1, regulatory subunit 3A enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:42,937,353...42,980,195
Ensembl chr 4:42,939,599...42,980,638 		JBrowse link
G Ppp1r3b protein phosphatase 1, regulatory subunit 3B enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:56,830,011...56,842,395
Ensembl chr16:56,829,660...56,842,406 		JBrowse link
G Ppp1r3c protein phosphatase 1, regulatory subunit 3C enables IEA
ISO
IBA		 GO_REF:0000107
(PMID:18852261)
GO_REF:0000033		 Ensembl
RGD
GO_Central		 PMID:18852261 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:234,460,958...234,465,961
Ensembl chr 1:234,460,652...234,465,961 		JBrowse link
G Ppp1r3d protein phosphatase 1, regulatory subunit 3D enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:165,502,384...165,505,455
Ensembl chr 3:165,502,384...165,505,455 		JBrowse link
G Ppp1r3e protein phosphatase 1, regulatory subunit 3E enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:28,348,443...28,349,603
Ensembl chr15:28,347,854...28,349,603 		JBrowse link
G Ppp1r3f protein phosphatase 1, regulatory subunit 3F enables ISO
IBA		 (PMID:21668450)
GO_REF:0000033		 RGD
GO_Central		 PMID:21668450 GO_REF:0000033 NCBI chr  X:14,915,740...14,945,249
Ensembl chr  X:14,929,323...14,945,193 		JBrowse link
G Ppp1r3g protein phosphatase 1, regulatory subunit 3G enables IBA
ISO		 GO_REF:0000033
(PMID:21471512), (PMID:31553910)		 GO_Central
RGD		 PMID:21471512 PMID:31553910 GO_REF:0000033 NCBI chr17:28,874,956...28,878,288
Ensembl chr17:28,876,482...28,877,525 		JBrowse link
G Stbd1 starch binding domain 1 enables ISO
IEA
ISS		 (PMID:20810658)
GO_REF:0000002
GO_REF:0000024		 RGD
InterPro
GO_Central		 PMID:20810658 GO_REF:0000002 GO_REF:0000024 NCBI chr14:15,470,452...15,473,857
Ensembl chr14:15,469,582...15,477,443 		JBrowse link
mannan binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Reg4 regenerating family member 4 enables ISO
IBA		 (PMID:20692269)
GO_REF:0000033		 RGD
GO_Central		 PMID:20692269 GO_REF:0000033 NCBI chr 2:185,818,946...185,833,252
Ensembl chr 2:185,821,210...185,833,353 		JBrowse link
starch binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epm2a EPM2A glucan phosphatase, laforin enables IEA
ISO		 GO_REF:0000107
(PMID:15102711)		 Ensembl
RGD		 PMID:15102711 GO_REF:0000107 NCBI chr 1:5,727,111...5,845,338
Ensembl chr 1:5,727,066...5,920,555 		JBrowse link
G Gpcpd1 glycerophosphocholine phosphodiesterase 1 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:119,787,681...119,832,550
Ensembl chr 3:119,787,682...119,832,517 		JBrowse link
G Stbd1 starch binding domain 1 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr14:15,470,452...15,473,857
Ensembl chr14:15,469,582...15,477,443 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 21087
    binding 18096
      carbohydrate binding 321
        polysaccharide binding 26
          (1->3),(1->4)-beta-glucan binding 0
          (1->3)-beta-D-glucan binding 4
          (1->4)-beta-D-galactan binding 0
          (1->6)-beta-D-glucan binding 0
          alpha-D-glucan binding 0
          arabinogalactan binding 0
          cellodextrin binding 0
          cellulose binding 0
          cyclodextrin binding 0
          galacturonan binding + 0
          glycogen binding 9
          heteropolysaccharide binding + 0
          inulin binding 0
          mannan binding 1
          pullulan binding 0
          starch binding 3
          xylan binding + 0
paths to the root