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ONTOLOGY REPORT - ANNOTATIONS


Term:B cell differentiation
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Accession:GO:0030183 term browser browse the term
Definition:The process in which a precursor cell type acquires the specialized features of a B cell. A B cell is a lymphocyte of B lineage with the phenotype CD19-positive and capable of B cell mediated immunity.
Comment:Note that immunologists typically use the word 'development' to refer to cells of B or T cell lineages undergoing the process that GO describes as 'cell differentiation'.
Synonyms:exact_synonym: B lymphocyte differentiation
 related_synonym: B cell development
 alt_id: GO:0042115



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B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam17 ADAM metallopeptidase domain 17 involved_in ISO (PMID:17371977) RGD PMID:17371977 NCBI chr 6:46,601,583...46,663,690
Ensembl chr 6:40,872,856...40,920,639
JBrowse link
G Adgrg3 adhesion G protein-coupled receptor G3 involved_in ISO (PMID:24113187) RGD PMID:24113187 NCBI chr19:9,978,450...10,007,145
Ensembl chr19:9,972,430...10,001,123
JBrowse link
G Aqp8 aquaporin 8 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:27256569)
UniProt
Ensembl
RGD
PMID:27256569 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:187,424,314...187,430,243
Ensembl chr 1:177,993,305...177,999,158
JBrowse link
G Bcl11a BCL11 transcription factor A acts_upstream_of_or_within ISO MGI:2663941 (PMID:12717432) RGD PMID:12717432 NCBI chr14:102,230,147...102,325,289
Ensembl chr14:98,030,461...98,124,180
JBrowse link
G Bcl2 BCL2, apoptosis regulator acts_upstream_of_or_within ISO MGI:2156165 (PMID:8170972), (PMID:9028316) RGD PMID:8170972 PMID:9028316 NCBI chr13:23,204,464...23,366,900
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743
JBrowse link
G Bcl6 BCL6, transcription repressor acts_upstream_of_or_within ISO MGI:88337 (PMID:14647274) RGD PMID:14647274 NCBI chr11:76,854,090...76,877,389
Ensembl chr11:76,854,090...76,877,389
JBrowse link
G Card11 caspase recruitment domain family, member 11 acts_upstream_of_or_within ISO MGI:3045950 (PMID:12818158) RGD PMID:12818158 NCBI chr12:13,621,140...13,758,115
Ensembl chr12:13,621,087...13,758,112
JBrowse link
G Cd40lg CD40 ligand involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:96556 (PMID:14647274)
Ensembl
RGD
PMID:14647274 GO_REF:0000107 NCBI chr  X:140,164,341...140,176,057
Ensembl chr  X:135,126,969...135,138,306
JBrowse link
G Cd79a CD79a molecule involved_in IBA
ISO
GO_REF:0000033
(PMID:11514602), (PMID:12097390)
GO_Central
RGD
PMID:11514602 PMID:12097390 GO_REF:0000033 NCBI chr 1:80,493,581...80,497,936
Ensembl chr 1:80,493,581...80,497,935
JBrowse link
G Cd79b CD79b molecule involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:91,739,134...91,742,312
Ensembl chr10:91,239,356...91,242,625
JBrowse link
G Cdh17 cadherin 17 involved_in ISO (PMID:15688343) RGD PMID:15688343 NCBI chr 5:30,024,544...30,112,226
Ensembl chr 5:25,262,758...25,314,884
JBrowse link
G Cebpg CCAAT/enhancer binding protein gamma involved_in ISS
ISO
GO_REF:0000024
(PMID:1431100)
UniProt
RGD
PMID:1431100 GO_REF:0000024 NCBI chr 1:96,820,981...96,829,736
Ensembl chr 1:87,684,019...87,694,569
JBrowse link
G Clcf1 cardiotrophin-like cytokine factor 1 acts_upstream_of_or_within ISO (PMID:10500198) RGD PMID:10500198 NCBI chr 1:210,937,763...210,947,064
Ensembl chr 1:201,507,859...201,517,605
JBrowse link
G Cr2 complement C3d receptor 2 involved_in ISO (PMID:2995485) RGD PMID:2995485 NCBI chr13:109,207,034...109,244,980
Ensembl chr13:106,685,413...106,716,235
JBrowse link
G Dcaf1 DDB1 and CUL4 associated factor 1 involved_in ISO (PMID:22157821) RGD PMID:22157821 NCBI chr 8:107,466,229...107,540,633
Ensembl chr 8:107,474,312...107,540,627
JBrowse link
G Dclre1c DNA cross-link repair 1C involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2667614 (PMID:12504013)
Ensembl
RGD
PMID:12504013 GO_REF:0000107 NCBI chr17:79,684,988...79,718,399
Ensembl chr17:74,776,935...74,809,186
JBrowse link
G Dnajb9 DnaJ heat shock protein family (Hsp40) member B9 involved_in ISS
ISO
GO_REF:0000024
(PMID:25222125)
UniProt
RGD
PMID:25222125 GO_REF:0000024 NCBI chr 6:66,997,842...67,007,371
Ensembl chr 6:61,269,913...61,275,063
JBrowse link
G Ep300 E1A binding protein p300 acts_upstream_of_or_within ISO MGI:3813243 (PMID:18684867) RGD PMID:18684867 NCBI chr 7:114,987,857...115,058,652
Ensembl chr 7:113,106,247...113,136,088
Ensembl chr 7:113,106,247...113,136,088
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in ISO MGI:3624790 (PMID:23531880) RGD PMID:23531880 NCBI chr 4:77,624,223...77,698,598
Ensembl chr 4:76,624,399...76,687,362
JBrowse link
G Flt3 Fms related receptor tyrosine kinase 3 involved_in IBA
ISO
GO_REF:0000033
(PMID:21228325)
GO_Central
RGD
PMID:21228325 GO_REF:0000033 NCBI chr12:12,660,035...12,735,584
Ensembl chr12:7,623,930...7,699,474
JBrowse link
G Flt3lg Fms related receptor tyrosine kinase 3 ligand involved_in ISO (PMID:38701783) RGD PMID:38701783 NCBI chr 1:95,615,056...95,620,463
Ensembl chr 1:95,609,370...95,620,463
JBrowse link
G Fnip1 folliculin interacting protein 1 involved_in ISO (PMID:32905580) RGD PMID:32905580 NCBI chr10:39,068,432...39,151,552
Ensembl chr10:38,567,729...38,650,824
JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3521818 (PMID:28566276)
Ensembl
RGD
PMID:28566276 GO_REF:0000107 NCBI chr 6:30,017,952...30,039,269
Ensembl chr 6:24,300,956...24,320,034
JBrowse link
G Fzd9 frizzled class receptor 9 acts_upstream_of_or_within ISO MGI:3526665 (PMID:15572594) RGD PMID:15572594 NCBI chr12:27,063,640...27,065,954
Ensembl chr12:21,427,084...21,429,398
JBrowse link
G Gimap1 GTPase, IMAP family member 1 acts_upstream_of_or_within ISO MGI:2449947|MGI:4459837 (PMID:20194894) RGD PMID:20194894 NCBI chr 4:77,687,581...77,691,468
Ensembl chr 4:77,682,171...77,691,866
JBrowse link
G Gon4l gon-4 like involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4829629 (PMID:20530203)
Ensembl
RGD
PMID:20530203 GO_REF:0000107 NCBI chr 2:176,531,274...176,604,446
Ensembl chr 2:174,233,461...174,306,634
JBrowse link
G Gps2 G protein pathway suppressor 2 involved_in ISO (PMID:28039360) RGD PMID:28039360 NCBI chr10:55,136,043...55,139,106
Ensembl chr10:54,637,455...54,640,650
JBrowse link
G Hdac7 histone deacetylase 7 involved_in TAS PMID:12711221 UniProt PMID:12711221 RGD:8553516 NCBI chr 7:130,803,013...130,841,181
Ensembl chr 7:128,923,920...128,962,072
JBrowse link
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within
involved_in
ISO MGI:2449914 (PMID:12522149) RGD PMID:12522149 NCBI chr 1:244,602,945...244,608,532
Ensembl chr 1:235,190,455...235,196,042
JBrowse link
G Hmga1 high mobility group AT-hook 1 acts_upstream_of_or_within ISO (PMID:32341372) RGD PMID:32341372 NCBI chr20:5,612,902...5,620,596
Ensembl chr20:5,611,694...5,618,752
JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of ISO MGI:2384134 (PMID:18523151) RGD PMID:18523151 NCBI chr 6:47,469,162...47,470,995
Ensembl chr 6:41,728,946...41,744,400
JBrowse link
G Ighe immunoglobulin heavy constant epsilon involved_in ISO MGI:1316738|MGI:6195834 (PMID:28923960) RGD PMID:28923960
G Ighg1 immunoglobulin heavy constant gamma 1 involved_in ISO MGI:1316738|MGI:6195842 (PMID:28923960) RGD PMID:28923960 Ensembl chr 6:132,389,370...132,393,397 JBrowse link
G Igkc immunoglobulin kappa constant acts_upstream_of_or_within ISO MGI:3624131 (PMID:8080841) RGD PMID:8080841
G Ikzf1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO MGI:2158738 (PMID:23071339), (PMID:7923373) RGD PMID:7923373 PMID:23071339 NCBI chr14:90,468,696...90,556,522
Ensembl chr14:86,255,065...86,342,416
JBrowse link
G Ikzf3 IKAROS family zinc finger 3 involved_in ISO (PMID:34155405) RGD PMID:34155405 NCBI chr10:83,956,850...84,049,861
Ensembl chr10:83,465,745...83,553,591
JBrowse link
G Il2rg interleukin 2 receptor subunit gamma acts_upstream_of ISO MGI:2429736 (PMID:9252128) RGD PMID:9252128 NCBI chr  X:66,395,330...66,399,026
Ensembl chr  X:66,392,542...66,399,823
JBrowse link
G Il9 interleukin 9 acts_upstream_of_or_within ISO MGI:96564 (PMID:30082831) RGD PMID:30082831 NCBI chr17:8,117,028...8,120,151
Ensembl chr17:8,111,772...8,114,895
JBrowse link
G Il9r interleukin 9 receptor acts_upstream_of_or_within ISO MGI:96563 (PMID:30082831) RGD PMID:30082831 NCBI chr10:15,936,156...15,947,613
Ensembl chr10:15,431,706...15,441,990
JBrowse link
G Jak3 Janus kinase 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:9498750)
BHF-UCL
RGD
PMID:9498750 GO_REF:0000024 NCBI chr16:18,418,807...18,432,515
Ensembl chr16:18,386,405...18,398,536
JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:32,901,615...32,978,895
Ensembl chr14:32,548,877...32,624,652
JBrowse link
G Lyl1 LYL1, basic helix-loop-helix family member involved_in ISS
ISO
GO_REF:0000024
(PMID:16514064)
UniProt
RGD
PMID:16514064 GO_REF:0000024 NCBI chr19:40,356,967...40,359,834
Ensembl chr19:23,452,140...23,455,007
JBrowse link
G Ms4a1 membrane spanning 4-domains A1 involved_in ISO (PMID:3925015) RGD PMID:3925015 NCBI chr 1:217,331,274...217,351,934
Ensembl chr 1:207,906,374...207,918,512
JBrowse link
G Msh2 mutS homolog 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1858055 (PMID:9697843)
Ensembl
RGD
PMID:9697843 GO_REF:0000107 NCBI chr 6:12,567,368...12,626,534
Ensembl chr 6:6,813,795...6,872,938
JBrowse link
G Muc19 mucin 19, oligomeric acts_upstream_of_or_within ISO (PMID:37475871) RGD PMID:37475871 NCBI chr 7:124,897,424...125,018,582
Ensembl chr 7:123,017,896...123,139,053
JBrowse link
G Myb MYB proto-oncogene, transcription factor acts_upstream_of_or_within ISO MGI:3047076 (PMID:17927961) RGD PMID:17927961 NCBI chr 1:17,759,309...17,793,306
Ensembl chr 1:15,939,761...15,973,057
JBrowse link
G Nfam1 NFAT activating protein with ITAM motif 1 involved_in ISO (PMID:15143214) RGD PMID:15143214 NCBI chr 7:114,139,318...114,175,395
Ensembl chr 7:114,139,345...114,175,442
JBrowse link
G Nhej1 nonhomologous end-joining factor 1 involved_in ISO
IEA
ISS
(PMID:16439204)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:16439204 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:83,974,995...84,071,161
Ensembl chr 9:76,526,324...76,622,444
JBrowse link
G Nkx2-3 NK2 homeobox 3 acts_upstream_of_or_within ISO MGI:2448069 (PMID:12682228) RGD PMID:12682228 NCBI chr 1:242,478,130...242,481,083
Ensembl chr 1:242,478,130...242,481,083
JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 acts_upstream_of_or_within ISO MGI:3505767 (PMID:15459109) RGD PMID:15459109 NCBI chr 2:175,534,844...175,551,664
Ensembl chr 2:173,236,963...173,253,770
JBrowse link
G Onecut1 one cut homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2179340 (PMID:12874218)
Ensembl
RGD
PMID:12874218 GO_REF:0000107 NCBI chr 8:84,480,066...84,507,848
Ensembl chr 8:75,599,740...75,627,277
JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2149414 (PMID:9988280)
Ensembl
RGD
PMID:9988280 GO_REF:0000107 NCBI chr 2:34,612,946...34,697,660
Ensembl chr 2:32,882,032...32,963,631
JBrowse link
G Plcg2 phospholipase C, gamma 2 involved_in ISO (PMID:10925250) RGD PMID:10925250 NCBI chr19:62,456,196...62,592,684
Ensembl chr19:45,547,416...45,683,930
JBrowse link
G Polm DNA polymerase mu acts_upstream_of_or_within ISO MGI:2179233 (PMID:15789338) RGD PMID:15789338 NCBI chr14:84,921,039...84,930,649
Ensembl chr14:80,706,345...80,717,086
JBrowse link
G Pou1f1 POU class 1 homeobox 1 acts_upstream_of_or_within ISO MGI:1856024 (PMID:9300691) RGD PMID:9300691 NCBI chr11:3,316,818...3,334,804
Ensembl chr11:3,317,058...3,334,801
JBrowse link
G Ptpn2 protein tyrosine phosphatase, non-receptor type 2 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:9271584)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:9271584 GO_REF:0000024 GO_REF:0000107 NCBI chr18:63,498,890...63,564,571
Ensembl chr18:61,229,014...61,294,627
JBrowse link
G Ptprc protein tyrosine phosphatase, receptor type, C acts_upstream_of_or_within
involved_in
ISO MGI:1857277|MGI:2181288 (PMID:12902479), (PMID:8666928), (PMID:9254656)
(PMID:15557316), (PMID:18249142)
RGD PMID:8666928 PMID:9254656 PMID:12902479 PMID:15557316 PMID:18249142 NCBI chr13:52,147,717...52,259,810
Ensembl chr13:49,596,193...49,708,692
JBrowse link
G Ptprj protein tyrosine phosphatase, receptor type, J involved_in ISO (PMID:18249142) RGD PMID:18249142 NCBI chr 3:96,861,785...97,017,702
Ensembl chr 3:76,405,927...76,562,260
JBrowse link
G Rabl3 RAB, member of RAS oncogene family-like 3 involved_in ISO (PMID:32220963) RGD PMID:32220963 NCBI chr11:63,153,281...63,182,240
Ensembl chr11:63,152,792...63,182,671
JBrowse link
G Rag1 recombination activating 1 acts_upstream_of_or_within
involved_in
ISO (PMID:11976687)
(PMID:1547488)
RGD PMID:1547488 PMID:11976687 NCBI chr 3:108,372,087...108,383,184
Ensembl chr 3:87,917,004...87,928,291
JBrowse link
G Rag2 recombination activating 2 acts_upstream_of_or_within
involved_in
ISO MGI:1858556 (PMID:11980719), (PMID:14595002)
(PMID:1547487), (PMID:1547488)
RGD PMID:1547487 PMID:1547488 PMID:11980719 PMID:14595002 NCBI chr 3:108,357,399...108,367,186
Ensembl chr 3:87,902,238...87,911,066
JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region acts_upstream_of_or_within ISO MGI:3583755 (PMID:11967543) RGD PMID:11967543 NCBI chr14:61,551,366...61,736,220
Ensembl chr14:57,338,507...57,523,353
JBrowse link
G Slc25a5 solute carrier family 25 member 5 involved_in ISS
ISO
GO_REF:0000024
(PMID:25613378)
UniProt
RGD
PMID:25613378 GO_REF:0000024 NCBI chr  X:120,897,616...120,900,683
Ensembl chr  X:116,031,803...116,034,967
JBrowse link
G Slc39a7 solute carrier family 39 member 7 involved_in ISO
IEA
ISS
(PMID:30718914)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:30718914 GO_REF:0000024 GO_REF:0000107 NCBI chr20:4,824,967...4,828,431
Ensembl chr20:4,822,012...4,826,537
JBrowse link
G Sp3 Sp3 transcription factor acts_upstream_of_or_within ISO MGI:2182438 (PMID:12676787) RGD PMID:12676787 NCBI chr 3:78,219,421...78,272,318
Ensembl chr 3:57,812,075...57,860,342
JBrowse link
G Stat5a signal transducer and activator of transcription 5A acts_upstream_of ISO MGI:103035 (PMID:10979977) RGD PMID:10979977 NCBI chr10:86,285,859...86,310,187
Ensembl chr10:85,785,537...85,809,866
JBrowse link
G Stat5b signal transducer and activator of transcription 5B involved_in
acts_upstream_of
IEA
ISO
GO_REF:0000107
MGI:103036 (PMID:10979977)
Ensembl
RGD
PMID:10979977 GO_REF:0000107 NCBI chr10:86,205,148...86,276,178
Ensembl chr10:85,705,670...85,775,668
JBrowse link
G Syk spleen associated tyrosine kinase involved_in
acts_upstream_of
IEA
ISO
GO_REF:0000107
MGI:1857421|MGI:2384078 (PMID:7477352), (PMID:7477353)
Ensembl
RGD
PMID:7477352 PMID:7477353 GO_REF:0000107 NCBI chr17:12,756,493...12,830,927
Ensembl chr17:12,604,619...12,661,410
JBrowse link
G Tcirg1 T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3 acts_upstream_of_or_within ISO MGI:1856973|MGI:3054898 (PMID:15284856), (PMID:15294947), (PMID:16797412) RGD PMID:15284856 PMID:15294947 PMID:16797412 NCBI chr 1:210,556,270...210,568,021
Ensembl chr 1:201,127,034...201,138,742
JBrowse link
G Tnfsf13b TNF superfamily member 13b involved_in
acts_upstream_of_or_within
ISO MGI:2387426 (PMID:18624351)
(PMID:17581616)
RGD PMID:17581616 PMID:18624351 NCBI chr16:86,164,377...86,195,072
Ensembl chr16:79,462,402...79,492,693
JBrowse link
G Top2b DNA topoisomerase II beta involved_in ISO (PMID:31409799), (PMID:32128574) RGD PMID:31409799 PMID:32128574 NCBI chr15:9,051,340...9,111,721
Ensembl chr15:9,051,341...9,112,085
JBrowse link
G Tpd52 tumor protein D52 involved_in ISO
IBA
(PMID:15576473)
GO_REF:0000033
RGD
GO_Central
PMID:15576473 GO_REF:0000033 NCBI chr 2:94,642,514...94,723,442
Ensembl chr 2:92,735,620...92,816,622
JBrowse link
G Tshr thyroid stimulating hormone receptor acts_upstream_of_or_within ISO MGI:1856914 (PMID:9300691) RGD PMID:9300691 NCBI chr 6:116,072,321...116,206,009
Ensembl chr 6:110,341,581...110,474,538
JBrowse link
G Yy1 YY1 transcription factor involved_in ISO MGI:3624790 (PMID:23531880) RGD PMID:23531880 NCBI chr 6:133,471,615...133,500,875
Ensembl chr 6:127,707,596...127,732,747
JBrowse link
G Zbtb1 zinc finger and BTB domain containing 1 acts_upstream_of_or_within ISO MGI:5300200 (PMID:22201126) RGD PMID:22201126 NCBI chr 6:100,832,506...100,864,019
Ensembl chr 6:95,096,387...95,118,996
JBrowse link
G Zbtb7a zinc finger and BTB domain containing 7a involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:17495164)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:17495164 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:9,211,733...9,229,273
Ensembl chr 7:8,563,779...8,576,539
JBrowse link
B cell affinity maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btk Bruton tyrosine kinase acts_upstream_of_or_within ISO MGI:1856317 (PMID:7680896) RGD PMID:7680896 NCBI chr  X:102,016,070...102,055,448
Ensembl chr  X:97,722,802...97,761,853
JBrowse link
G Traf3ip2 Traf3 interacting protein 2 involved_in ISO MGI:3510784 (PMID:20543113) RGD PMID:20543113 NCBI chr20:44,565,992...44,609,240
Ensembl chr20:43,011,450...43,054,667
JBrowse link
B cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2, apoptosis regulator involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2156165 (PMID:8788039)
Ensembl
RGD
PMID:8788039 GO_REF:0000107 NCBI chr13:23,204,464...23,366,900
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743
JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO MGI:1857113 (PMID:8788039) RGD PMID:8788039 NCBI chr11:98,544,952...98,762,499
Ensembl chr11:85,040,792...85,257,952
JBrowse link
G Rag2 recombination activating 2 acts_upstream_of_or_within ISO MGI:1858556 (PMID:8788039) RGD PMID:8788039 NCBI chr 3:108,357,399...108,367,186
Ensembl chr 3:87,902,238...87,911,066
JBrowse link
G Tcf3 transcription factor 3 involved_in ISO
ISS
(PMID:15030778)
GO_REF:0000024
RGD
UniProt
PMID:15030778 GO_REF:0000024 NCBI chr 7:9,931,251...9,952,994
Ensembl chr 7:9,280,571...9,302,314
JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857590 (PMID:8788039)
Ensembl
RGD
PMID:8788039 GO_REF:0000107 NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,300,048...54,311,524
JBrowse link
B cell negative selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bak1 BCL2-antagonist/killer 1 acts_upstream_of_or_within ISO MGI:99702 (PMID:16055554) RGD PMID:16055554 NCBI chr20:5,102,334...5,111,615
Ensembl chr20:5,100,480...5,109,264
JBrowse link
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO MGI:1097161 (PMID:16055554) RGD PMID:16055554 NCBI chr 1:105,076,472...105,081,906
Ensembl chr 1:95,938,808...95,945,368
JBrowse link
B-1 B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd19 CD19 molecule involved_in ISO (PMID:7543183) RGD PMID:7543183 NCBI chr 1:190,417,853...190,424,494
Ensembl chr 1:180,987,286...180,993,975
JBrowse link
G Malt1 MALT1 paracaspase acts_upstream_of_or_within ISO MGI:3639305 (PMID:14614861) RGD PMID:14614861 NCBI chr18:61,212,290...61,266,272
Ensembl chr18:58,942,299...58,994,260
JBrowse link
B-1 B cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slamf8 SLAM family member 8 involved_in ISO (PMID:11313408) RGD PMID:11313408 NCBI chr13:87,580,081...87,589,941
Ensembl chr13:85,047,727...85,057,211
JBrowse link
B-1a B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmtm7 CKLF-like MARVEL transmembrane domain containing 7 acts_upstream_of_or_within ISO (PMID:24080084) RGD PMID:24080084 NCBI chr 8:123,326,233...123,353,148
Ensembl chr 8:114,448,042...114,474,621
JBrowse link
G Dpp4 dipeptidylpeptidase 4 IMP RGD PMID:19327106 RGD:41408336 NCBI chr 3:67,370,794...67,452,422
Ensembl chr 3:46,962,243...47,043,901
JBrowse link
G Nfatc1 nuclear factor of activated T-cells 1 acts_upstream_of_or_within ISO MGI:2181762 (PMID:14595020) RGD PMID:14595020 NCBI chr18:76,321,386...76,430,997
Ensembl chr18:74,046,904...74,156,028
JBrowse link
G Plcl2 phospholipase C-like 2 acts_upstream_of_or_within ISO MGI:2679632 (PMID:14517301) RGD PMID:14517301 NCBI chr 9:3,292,564...3,477,009
Ensembl chr 9:3,292,695...3,477,009
JBrowse link
follicular B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Irf8 interferon regulatory factor 8 involved_in ISO UniProtKB:P17433 (PMID:31000603) RGD PMID:31000603 NCBI chr19:65,699,284...65,721,066
Ensembl chr19:48,790,588...48,811,829
JBrowse link
G Muc19 mucin 19, oligomeric acts_upstream_of_or_within ISO (PMID:37475871) RGD PMID:37475871 NCBI chr 7:124,897,424...125,018,582
Ensembl chr 7:123,017,896...123,139,053
JBrowse link
G Plcg2 phospholipase C, gamma 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2386100 (PMID:12928432)
Ensembl
RGD
PMID:12928432 GO_REF:0000107 NCBI chr19:62,456,196...62,592,684
Ensembl chr19:45,547,416...45,683,930
JBrowse link
G Spi1 Spi-1 proto-oncogene involved_in ISO UniProtKB:P23611 (PMID:31000603) RGD PMID:31000603 NCBI chr 3:97,529,509...97,548,204
Ensembl chr 3:77,073,012...77,092,393
JBrowse link
germinal center B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857117|MGI:2683027 (PMID:14607964)
Ensembl
RGD
PMID:14607964 GO_REF:0000107 NCBI chr 3:172,818,174...172,842,283
Ensembl chr 3:152,398,747...152,447,088
JBrowse link
G Cdh17 cadherin 17 involved_in ISO (PMID:15688343) RGD PMID:15688343 NCBI chr 5:30,024,544...30,112,226
Ensembl chr 5:25,262,758...25,314,884
JBrowse link
G Il21 interleukin 21 involved_in ISS
ISO
GO_REF:0000024
(PMID:23045607)
UniProt
RGD
PMID:23045607 GO_REF:0000024 NCBI chr 2:122,045,240...122,055,142
Ensembl chr 2:120,119,444...120,126,996
JBrowse link
G Il6 interleukin 6 involved_in ISS
ISO
GO_REF:0000024
(PMID:23045607)
UniProt
RGD
PMID:23045607 GO_REF:0000024 NCBI chr 4:5,889,999...5,894,575
Ensembl chr 4:5,213,394...5,219,178
JBrowse link
G Irf8 interferon regulatory factor 8 involved_in ISO UniProtKB:P17433 (PMID:31000603) RGD PMID:31000603 NCBI chr19:65,699,284...65,721,066
Ensembl chr19:48,790,588...48,811,829
JBrowse link
G Itfg2 integrin alpha FG-GAP repeat containing 2 acts_upstream_of_or_within ISO MGI:4235940 (PMID:23997217) RGD PMID:23997217 NCBI chr 4:161,684,249...161,698,315
Ensembl chr 4:161,684,249...161,698,422
JBrowse link
G Phf14 PHD finger protein 14 involved_in ISO (PMID:33035772) RGD PMID:33035772 NCBI chr 4:40,975,897...41,162,043
Ensembl chr 4:40,009,264...40,195,885
JBrowse link
G Pou2af1 POU class 2 homeobox associating factor 1 involved_in ISO (PMID:23045607) RGD PMID:23045607 NCBI chr 8:60,418,173...60,445,176
Ensembl chr 8:51,474,015...51,548,819
JBrowse link
G Spi1 Spi-1 proto-oncogene involved_in ISO UniProtKB:P23611 (PMID:31000603) RGD PMID:31000603 NCBI chr 3:97,529,509...97,548,204
Ensembl chr 3:77,073,012...77,092,393
JBrowse link
immature B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fnip1 folliculin interacting protein 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:5437714 (PMID:22608497)
UniProt
RGD
PMID:22608497 GO_REF:0000024 NCBI chr10:39,068,432...39,151,552
Ensembl chr10:38,567,729...38,650,824
JBrowse link
G Irf2bp2 interferon regulatory factor 2 binding protein 2 involved_in ISO (PMID:27016798) RGD PMID:27016798 NCBI chr19:71,456,689...71,462,368
Ensembl chr19:54,560,128...54,566,642
JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase involved_in ISO (PMID:15067126) RGD PMID:15067126 NCBI chr14:32,901,615...32,978,895
Ensembl chr14:32,548,877...32,624,652
JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO MGI:2383951 (PMID:9768755) RGD PMID:9768755 NCBI chr11:98,544,952...98,762,499
Ensembl chr11:85,040,792...85,257,952
JBrowse link
G Spi1 Spi-1 proto-oncogene involved_in ISO UniProtKB:O35906 (PMID:28062693) RGD PMID:28062693 NCBI chr 3:97,529,509...97,548,204
Ensembl chr 3:77,073,012...77,092,393
JBrowse link
G Spib Spi-B transcription factor involved_in ISO UniProtKB:P17433 (PMID:28062693) RGD PMID:28062693 NCBI chr 1:95,018,939...95,024,804
Ensembl chr 1:95,018,947...95,024,780
JBrowse link
G Syvn1 synoviolin 1 involved_in ISO (PMID:29907570) RGD PMID:29907570 NCBI chr 1:203,339,235...203,346,137
Ensembl chr 1:203,339,619...203,346,152
JBrowse link
marginal zone B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl3 BCL3, transcription coactivator acts_upstream_of_or_within ISO MGI:1861796 (PMID:9009202) RGD PMID:9009202 NCBI chr 1:88,599,321...88,613,555
Ensembl chr 1:79,471,369...79,485,607
JBrowse link
G Cdh17 cadherin 17 involved_in ISO (PMID:15688343) RGD PMID:15688343 NCBI chr 5:30,024,544...30,112,226
Ensembl chr 5:25,262,758...25,314,884
JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:15146182), (PMID:19217325)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:15146182 PMID:19217325 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:64,985,161...64,993,274
Ensembl chr 1:56,312,066...56,320,179
JBrowse link
G Dock10 dedicator of cytokinesis 10 involved_in ISO (PMID:25729399) RGD PMID:25729399 NCBI chr 9:89,291,936...89,549,871
Ensembl chr 9:81,843,604...82,101,525
JBrowse link
G Dock11 dedicator of cytokinesis 11 involved_in ISO (PMID:25729399) RGD PMID:25729399 NCBI chr  X:119,997,523...120,180,643
Ensembl chr  X:115,131,909...115,314,854
JBrowse link
G Lfng LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:19217325)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:19217325 GO_REF:0000024 GO_REF:0000107 NCBI chr12:19,144,474...19,152,951
Ensembl chr12:14,018,333...14,039,008
JBrowse link
G Mfng MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase involved_in ISO (PMID:19217325) RGD PMID:19217325 NCBI chr 7:112,191,288...112,209,129
Ensembl chr 7:110,310,812...110,328,653
JBrowse link
G Notch2 notch receptor 2 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:19217325)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:19217325 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:188,299,336...188,432,823
Ensembl chr 2:185,610,589...185,744,088
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta involved_in ISS
ISO
GO_REF:0000024
(PMID:10881171)
UniProt
RGD
PMID:10881171 GO_REF:0000024 NCBI chr15:44,536,275...44,656,754
Ensembl chr15:40,360,723...40,481,282
JBrowse link
mature B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il2rg interleukin 2 receptor subunit gamma acts_upstream_of ISO MGI:5544783 (PMID:23918385) RGD PMID:23918385 NCBI chr  X:66,395,330...66,399,026
Ensembl chr  X:66,392,542...66,399,823
JBrowse link
G Pou2f2 POU class 2 homeobox 2 acts_upstream_of_or_within ISO MGI:3028896 (PMID:8096198) RGD PMID:8096198 NCBI chr 1:89,810,153...89,897,560
Ensembl chr 1:80,685,741...80,724,261
JBrowse link
mature B cell differentiation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C10h17orf99 similar to human chromosome 17 open reading frame 99 involved_in ISO (PMID:28978694) RGD PMID:28978694 NCBI chr10:103,015,371...103,027,407
Ensembl chr10:103,016,505...103,027,407
JBrowse link
G Gpr183 G protein-coupled receptor 183 involved_in ISO (PMID:19597478) RGD PMID:19597478 NCBI chr15:105,445,129...105,457,192
Ensembl chr15:99,036,367...99,050,559
JBrowse link
G Rag2 recombination activating 2 IMP RGD PMID:30206106 RGD:38508903 NCBI chr 3:108,357,399...108,367,186
Ensembl chr 3:87,902,238...87,911,066
JBrowse link
memory B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G St3gal1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 involved_in ISO (PMID:10755614) RGD PMID:10755614 NCBI chr 7:100,734,300...100,802,443
Ensembl chr 7:98,845,270...98,913,236
JBrowse link
negative regulation of B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flt3 Fms related receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (PMID:16618805) RGD PMID:16618805 NCBI chr12:12,660,035...12,735,584
Ensembl chr12:7,623,930...7,699,474
JBrowse link
G Hmgb3 high mobility group box 3 acts_upstream_of_or_within ISO (PMID:12714519) RGD PMID:12714519 NCBI chr  X:154,341,106...154,346,087
Ensembl chr  X:149,296,375...149,301,292
JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO MGI:2384134 (PMID:18523151) RGD PMID:18523151 NCBI chr 6:47,469,162...47,470,995
Ensembl chr 6:41,728,946...41,744,400
JBrowse link
G Sfrp1 secreted frizzled-related protein 1 involved_in ISO
IEA
(PMID:18941195)
GO_REF:0000107
RGD
Ensembl
PMID:18941195 GO_REF:0000107 NCBI chr16:75,278,325...75,316,736
Ensembl chr16:68,575,763...68,614,286
JBrowse link
negative regulation of plasma cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl6 BCL6, transcription repressor acts_upstream_of_or_within ISO MGI:2158439 (PMID:15240705) RGD PMID:15240705 NCBI chr11:76,854,090...76,877,389
Ensembl chr11:76,854,090...76,877,389
JBrowse link
negative regulation of pre-B cell receptor expression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Laptm5 lysosomal protein transmembrane 5 involved_in ISO (PMID:22949502) RGD PMID:22949502 NCBI chr 5:148,371,880...148,393,927
Ensembl chr 5:143,087,759...143,109,807
JBrowse link
plasma cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl6 BCL6, transcription repressor acts_upstream_of ISO MGI:2158439 (PMID:15240705) RGD PMID:15240705 NCBI chr11:76,854,090...76,877,389
Ensembl chr11:76,854,090...76,877,389
JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO MGI:2385534 (PMID:29259245) RGD PMID:29259245 NCBI chr 1:22,518,051...22,583,044
Ensembl chr 1:20,698,764...20,763,715
JBrowse link
G Itm2a integral membrane protein 2A acts_upstream_of_or_within ISO MGI:5645968 (PMID:24831988) RGD PMID:24831988 NCBI chr  X:72,486,383...72,492,344
Ensembl chr  X:72,486,381...72,492,363
JBrowse link
G Lgals1 galectin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:21753146)
Ensembl
RGD
PMID:21753146 GO_REF:0000107 NCBI chr 7:112,365,695...112,368,801
Ensembl chr 7:110,481,392...110,488,345
JBrowse link
G Lgals8 galectin 8 acts_upstream_of_or_within ISO (PMID:21753146) RGD PMID:21753146 NCBI chr17:62,716,368...62,744,272
Ensembl chr17:58,028,105...58,052,764
JBrowse link
G Nfkbiz NFKB inhibitor zeta involved_in ISO MGI:5501251 (PMID:25124037) RGD PMID:25124037 NCBI chr11:58,251,720...58,279,767
Ensembl chr11:44,782,676...44,810,723
JBrowse link
G Nkx2-3 NK2 homeobox 3 acts_upstream_of_or_within ISO MGI:2448069 (PMID:10926756) RGD PMID:10926756 NCBI chr 1:242,478,130...242,481,083
Ensembl chr 1:242,478,130...242,481,083
JBrowse link
positive regulation of B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp11c ATPase phospholipid transporting 11C involved_in ISO (PMID:21423173) RGD PMID:21423173 NCBI chr  X:143,600,763...143,788,407
Ensembl chr  X:138,565,836...138,751,204
JBrowse link
G Bad BCL2-associated agonist of cell death involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3029528 (PMID:12431371)
Ensembl
RGD
PMID:12431371 GO_REF:0000107 NCBI chr 1:213,562,719...213,572,034
Ensembl chr 1:204,131,501...204,142,823
JBrowse link
G Cd27 CD27 molecule involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:158,030,700...158,035,862
Ensembl chr 4:158,030,703...158,035,592
JBrowse link
G Il2rg interleukin 2 receptor subunit gamma acts_upstream_of_or_within ISO MGI:2429736|MGI:5544783 (PMID:23918385), (PMID:9252128) RGD PMID:9252128 PMID:23918385 NCBI chr  X:66,395,330...66,399,026
Ensembl chr  X:66,392,542...66,399,823
JBrowse link
G Il7 interleukin 7 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:16797412)
Ensembl
RGD
PMID:16797412 GO_REF:0000107 NCBI chr 2:96,142,523...96,186,282
Ensembl chr 2:94,234,766...94,280,075
JBrowse link
G Inpp5d inositol polyphosphate-5-phosphatase D involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000107
MGI:2386884 (PMID:10704460), (PMID:9620849)
GO_REF:0000033
Ensembl
RGD
GO_Central
PMID:9620849 PMID:10704460 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:95,735,533...95,840,584
Ensembl chr 9:88,287,677...88,392,746
JBrowse link
G Mmp14 matrix metallopeptidase 14 involved_in ISS
ISO
GO_REF:0000024
(PMID:21572390)
UniProt
RGD
PMID:21572390 GO_REF:0000024 NCBI chr15:31,857,824...31,867,049
Ensembl chr15:27,887,727...27,899,864
JBrowse link
G Nckap1l NCK associated protein 1 like involved_in ISS
ISO
GO_REF:0000024
(PMID:19015308)
UniProt
RGD
PMID:19015308 GO_REF:0000024 NCBI chr 7:136,455,900...136,501,384
Ensembl chr 7:134,577,482...134,622,934
JBrowse link
G Pcid2 PCI domain containing 2 involved_in ISO (PMID:20870947) RGD PMID:20870947 NCBI chr16:76,423,245...76,448,712
Ensembl chr16:76,423,245...76,448,712
JBrowse link
G Ppp2r3c protein phosphatase 2, regulatory subunit B'', gamma involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000107
MGI:3759678 (PMID:16129705)
GO_REF:0000033
Ensembl
RGD
GO_Central
PMID:16129705 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:78,382,849...78,406,037
Ensembl chr 6:72,647,025...72,672,491
JBrowse link
G Spi1 Spi-1 proto-oncogene involved_in ISO
IEA
ISS
(PMID:33951726)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:33951726 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:97,529,509...97,548,204
Ensembl chr 3:77,073,012...77,092,393
JBrowse link
G Stat5a signal transducer and activator of transcription 5A acts_upstream_of_or_within ISO MGI:103035 (PMID:10979977) RGD PMID:10979977 NCBI chr10:86,285,859...86,310,187
Ensembl chr10:85,785,537...85,809,866
JBrowse link
G Stat5b signal transducer and activator of transcription 5B involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:103036 (PMID:10979977)
Ensembl
RGD
PMID:10979977 GO_REF:0000107 NCBI chr10:86,205,148...86,276,178
Ensembl chr10:85,705,670...85,775,668
JBrowse link
G Syk spleen associated tyrosine kinase involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857421|MGI:2384078 (PMID:7477352), (PMID:7477353)
(PMID:18369315)
Ensembl
RGD
PMID:7477352 PMID:7477353 PMID:18369315 GO_REF:0000107 NCBI chr17:12,756,493...12,830,927
Ensembl chr17:12,604,619...12,661,410
JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISO
ISS
(PMID:11460154)
GO_REF:0000024
RGD
UniProt
PMID:11460154 GO_REF:0000024 NCBI chr14:84,604,623...84,609,707
Ensembl chr14:80,390,643...80,395,693
JBrowse link
positive regulation of plasma cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddrgk1 DDRGK domain containing 1 involved_in ISO (PMID:30842412) RGD PMID:30842412 NCBI chr 3:138,315,006...138,336,691
Ensembl chr 3:117,861,653...117,882,680
JBrowse link
G Il10 interleukin 10 acts_upstream_of ISO UniProtKB:P60568 (PMID:22962438) RGD PMID:22962438 NCBI chr13:45,024,921...45,029,586
Ensembl chr13:42,472,839...42,477,313
JBrowse link
G Il2 interleukin 2 acts_upstream_of ISO UniProtKB:P22301 (PMID:22962438) RGD PMID:22962438 NCBI chr 2:121,932,968...121,937,672
Ensembl chr 2:120,004,862...120,009,566
JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISO
ISS
IEA
(PMID:11460154)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:11460154 GO_REF:0000024 GO_REF:0000107 NCBI chr14:84,604,623...84,609,707
Ensembl chr14:80,390,643...80,395,693
JBrowse link
pre-B cell allelic exclusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase involved_in ISO (PMID:19448632) RGD PMID:19448632 NCBI chr 8:62,724,939...62,829,040
Ensembl chr 8:53,831,093...53,932,437
JBrowse link
G Rag1 recombination activating 1 involved_in IBA
ISO
GO_REF:0000033
(PMID:19448632)
GO_Central
RGD
PMID:19448632 GO_REF:0000033 NCBI chr 3:108,372,087...108,383,184
Ensembl chr 3:87,917,004...87,928,291
JBrowse link
G Rag2 recombination activating 2 involved_in ISO (PMID:19448632) RGD PMID:19448632 NCBI chr 3:108,357,399...108,367,186
Ensembl chr 3:87,902,238...87,911,066
JBrowse link
pre-B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp11c ATPase phospholipid transporting 11C involved_in ISO (PMID:21423173) RGD PMID:21423173 NCBI chr  X:143,600,763...143,788,407
Ensembl chr  X:138,565,836...138,751,204
JBrowse link
G Cd24 CD24 molecule acts_upstream_of_or_within ISO MGI:2179996 (PMID:7795661), (PMID:9028339) RGD PMID:7795661 PMID:9028339 NCBI chr20:48,655,549...48,661,786
Ensembl chr20:47,073,512...47,079,662
JBrowse link
G Foxp1 forkhead box P1 acts_upstream_of_or_within ISO MGI:3711150 (PMID:16819554) RGD PMID:16819554 NCBI chr 4:133,117,346...133,808,647
Ensembl chr 4:131,564,756...132,112,258
JBrowse link
G Lrrc8a leucine rich repeat containing 8 VRAC subunit A involved_in ISS
ISO
GO_REF:0000024
(PMID:14660746)
UniProt
RGD
PMID:14660746 GO_REF:0000024 NCBI chr 3:13,509,577...13,537,174
Ensembl chr 3:13,510,513...13,536,202
JBrowse link
G Mir17 microRNA 17 acts_upstream_of_or_within ISO MGI:2676844|MGI:2676872|MGI:3618743|MGI:3629917|MGI:3629918 (PMID:18329372) RGD PMID:18329372 NCBI chr15:98,587,848...98,587,931
Ensembl chr15:92,180,629...92,180,712
JBrowse link
G Mir18a microRNA 18a acts_upstream_of_or_within ISO MGI:2676872|MGI:3618743|MGI:3619065|MGI:3629917|MGI:3629918 (PMID:18329372) RGD PMID:18329372 NCBI chr15:98,587,984...98,588,079
Ensembl chr15:92,180,765...92,180,860
JBrowse link
G Mir19a microRNA 19a acts_upstream_of_or_within ISO MGI:2676844|MGI:2676872|MGI:3619065|MGI:3629917|MGI:3629918 (PMID:18329372) RGD PMID:18329372 NCBI chr15:98,588,131...98,588,212
Ensembl chr15:92,180,912...92,180,993
JBrowse link
G Mir19b1 microRNA 19b-1 acts_upstream_of_or_within ISO MGI:2676844|MGI:2676872|MGI:3618743|MGI:3619065|MGI:3629918 (PMID:18329372) RGD PMID:18329372 NCBI chr15:98,588,433...98,588,519
Ensembl chr15:92,181,214...92,181,300
JBrowse link
G Mir20a microRNA 20a acts_upstream_of_or_within ISO MGI:2676844|MGI:3618743|MGI:3619065|MGI:3629917|MGI:3629918 (PMID:18329372) RGD PMID:18329372 NCBI chr15:98,588,303...98,588,387
Ensembl chr15:92,181,084...92,181,168
JBrowse link
G Mir92a1 microRNA 92a-1 acts_upstream_of_or_within ISO MGI:2676844|MGI:2676872|MGI:3618743|MGI:3619065|MGI:3629917 (PMID:18329372) RGD PMID:18329372 NCBI chr15:98,588,555...98,588,632
Ensembl chr15:92,181,336...92,181,413
JBrowse link
regulation of B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankle1 ankyrin repeat and LEM domain containing 1 NOT|involved_in ISO (PMID:27010503) RGD PMID:27010503 NCBI chr16:18,076,413...18,082,356
Ensembl chr16:18,076,492...18,083,729
JBrowse link
G Card11 caspase recruitment domain family, member 11 acts_upstream_of_or_within ISO MGI:3039682 (PMID:12867038) RGD PMID:12867038 NCBI chr12:13,621,140...13,758,115
Ensembl chr12:13,621,087...13,758,112
JBrowse link
G Cd24 CD24 molecule acts_upstream_of_or_within ISO MGI:2179996 (PMID:7795661), (PMID:9028339) RGD PMID:7795661 PMID:9028339 NCBI chr20:48,655,549...48,661,786
Ensembl chr20:47,073,512...47,079,662
JBrowse link
G Cyld CYLD lysine 63 deubiquitinase acts_upstream_of_or_within ISO MGI:3664438 (PMID:16501569) RGD PMID:16501569 NCBI chr19:34,487,491...34,547,311
Ensembl chr19:18,314,019...18,373,658
JBrowse link
G Fas Fas cell surface death receptor acts_upstream_of_or_within ISO MGI:1856334 (PMID:6610701) RGD PMID:6610701 NCBI chr 1:241,212,155...241,245,774
Ensembl chr 1:231,798,960...231,832,591
JBrowse link
G Ikzf3 IKAROS family zinc finger 3 involved_in ISO (PMID:9806640) RGD PMID:9806640 NCBI chr10:83,956,850...84,049,861
Ensembl chr10:83,465,745...83,553,591
JBrowse link
G Il4i1 interleukin 4 induced 1 involved_in ISO (PMID:29288206) RGD PMID:29288206 NCBI chr 1:104,435,540...104,461,049
Ensembl chr 1:95,295,601...95,324,562
JBrowse link
G Mir150 microRNA 150 acts_upstream_of_or_within ISO MGI:3763431 (PMID:17927961) RGD PMID:17927961 NCBI chr 1:104,741,487...104,741,571
Ensembl chr 1:95,605,024...95,605,108
JBrowse link
G Nfam1 NFAT activating protein with ITAM motif 1 acts_upstream_of_or_within ISO (PMID:15143214) RGD PMID:15143214 NCBI chr 7:114,139,318...114,175,395
Ensembl chr 7:114,139,345...114,175,442
JBrowse link
G Ptpn6 protein tyrosine phosphatase, non-receptor type 6 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856074 (PMID:9254656)
Ensembl
RGD
PMID:9254656 GO_REF:0000107 NCBI chr 4:159,212,320...159,237,069
Ensembl chr 4:157,526,035...157,550,984
JBrowse link
G Slamf8 SLAM family member 8 involved_in ISO (PMID:11313408) RGD PMID:11313408 NCBI chr13:87,580,081...87,589,941
Ensembl chr13:85,047,727...85,057,211
JBrowse link
G Tlr9 toll-like receptor 9 involved_in ISO (PMID:23857366) RGD PMID:23857366 NCBI chr 8:115,743,407...115,747,523
Ensembl chr 8:106,864,680...106,868,796
JBrowse link
G Zfp36l1 zinc finger protein 36, C3H type-like 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:27102483)
UniProt
RGD
PMID:27102483 GO_REF:0000024 NCBI chr 6:104,663,396...104,669,815
Ensembl chr 6:98,930,718...98,935,748
JBrowse link
G Zfp36l2 zinc finger protein 36, C3H type-like 2 involved_in ISO (PMID:27102483) RGD PMID:27102483 NCBI chr 6:16,242,622...16,246,662
Ensembl chr 6:10,490,032...10,494,064
JBrowse link
transitional one stage B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:2153718 (PMID:19228876) RGD PMID:19228876 NCBI chr 3:35,377,587...35,480,843
Ensembl chr 3:14,979,853...15,083,065
JBrowse link
G Tnfsf13b TNF superfamily member 13b acts_upstream_of_or_within ISO (PMID:17581616) RGD PMID:17581616 NCBI chr16:86,164,377...86,195,072
Ensembl chr16:79,462,402...79,492,693
JBrowse link
transitional two stage B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Traf3ip2 Traf3 interacting protein 2 involved_in ISO MGI:3510784 (PMID:20543113) RGD PMID:20543113 NCBI chr20:44,565,992...44,609,240
Ensembl chr20:43,011,450...43,054,667
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20553
    immune system process 3120
      leukocyte activation 1075
        lymphocyte activation 869
          lymphocyte differentiation 449
            B cell differentiation 154
              B cell lineage commitment + 6
              B cell selection + 4
              immature B cell differentiation + 24
              mature B cell differentiation + 43
              negative regulation of B cell differentiation + 5
              positive regulation of B cell differentiation + 18
              regulation of B cell differentiation + 37
Path 2
Term Annotations click to browse term
  biological_process 20553
    developmental process 7140
      cellular developmental process 4831
        cell differentiation 4830
          cell development 3338
            hemopoiesis 1083
              leukocyte differentiation 688
                mononuclear cell differentiation 552
                  lymphocyte differentiation 449
                    B cell differentiation 154
                      B cell lineage commitment + 6
                      B cell selection + 4
                      immature B cell differentiation + 24
                      mature B cell differentiation + 43
                      negative regulation of B cell differentiation + 5
                      positive regulation of B cell differentiation + 18
                      regulation of B cell differentiation + 37
paths to the root