Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:clathrin coat of trans-Golgi network vesicle
go back to main search page
Accession:GO:0030130 term browser browse the term
Definition:A clathrin coat found on a vesicle of the trans-Golgi network.
Synonyms:exact_synonym: clathrin coat of TGN vesicle


show annotations for term's descendants           Sort by:
clathrin coat of trans-Golgi network vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clta clathrin, light chain A part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:58,244,253...58,263,480 JBrowse link
G Cltb clathrin, light chain B part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:10,001,512...10,019,201 JBrowse link
G Cltc clathrin heavy chain part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:71,517,661...71,574,591 JBrowse link
G Dnm1l dynamin 1-like NOT|part_of IDA PMID:9472031 ParkinsonsUK-UCL PMID:9472031 RGD:11535088 NCBI chr11:98,084,049...98,135,663 JBrowse link
G Synrg synergin, gamma part_of IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:10477754 GO_REF:0000033, RGD:631945 NCBI chr10:68,848,828...68,931,252 JBrowse link
AP-1 adaptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aftph aftiphilin part_of ISO
IBA		 (PMID:15758025)
GO_REF:0000033		 RGD
GO_Central		 PMID:15758025 GO_REF:0000033 NCBI chr14:94,871,429...94,925,625 JBrowse link
G Ap1g1 adaptor related protein complex 1 subunit gamma 1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:37,744,633...37,831,134 JBrowse link
G Ap1g2 adaptor related protein complex 1 subunit gamma 2 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:28,571,571...28,579,421 JBrowse link
G Ap1s1 adaptor related protein complex 1 subunit sigma 1 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr12:19,625,267...19,635,792 JBrowse link
G Ap1s2 adaptor related protein complex 1 subunit sigma 2 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr  X:30,572,746...30,598,961 JBrowse link
G Ap1s3 adaptor related protein complex 1 subunit sigma 3 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:80,950,402...81,009,889 JBrowse link
G Clba1 clathrin binding box of aftiphilin containing 1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:131,882,866...131,889,662 JBrowse link
G Slc18a3 solute carrier family 18 member A3 part_of IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:14724281 GO_REF:0000033, RGD:2317430 NCBI chr16:7,713,630...7,716,491 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21322
    cellular anatomical structure 21027
      endomembrane system 4394
        Golgi apparatus 1467
          clathrin coat of trans-Golgi network vesicle 13
            AP-1 adaptor complex 8
Path 2
Term Annotations click to browse term
  cellular_component 21322
    cellular anatomical structure 21027
      organelle 14240
        membrane-bounded organelle 12805
          vesicle 2260
            intracellular vesicle 2074
              cytoplasmic vesicle 2065
                coated vesicle 240
                  clathrin-coated vesicle 147
                    trans-Golgi network transport vesicle 34
                      trans-Golgi network transport vesicle membrane 16
                        clathrin coat of trans-Golgi network vesicle 13
                          AP-1 adaptor complex 8
paths to the root