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ONTOLOGY REPORT - ANNOTATIONS

Term:actin filament-based movement
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Accession:GO:0030048 term browser browse the term
Definition:Movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins.


show annotations for term's descendants           Sort by:
actin filament-based movement term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actc1 actin, alpha, cardiac muscle 1 involved_in ISO (PMID:16611632) RGD PMID:16611632 NCBI chr 3:100,811,987...100,817,523 JBrowse link
G Myh10 myosin heavy chain 10 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15845534)
GO_REF:0000107		 RGD
Ensembl		 PMID:15845534 GO_REF:0000107 NCBI chr10:53,393,901...53,525,174 JBrowse link
G Myh14 myosin heavy chain 14 acts_upstream_of_or_within ISO (PMID:14594953), (PMID:15845534) RGD PMID:14594953 PMID:15845534 NCBI chr 1:95,096,266...95,158,861 JBrowse link
G Myh6 myosin heavy chain 6 acts_upstream_of_or_within ISO MGI:2182704|MGI:3664197 (PMID:15001446) RGD PMID:15001446 NCBI chr15:32,388,102...32,413,663 JBrowse link
G Myh9 myosin, heavy chain 9 involved_in
acts_upstream_of_or_within		 ISO
ISS		 (PMID:12237319)
GO_REF:0000024
(PMID:15845534)		 RGD
UniProt		 PMID:12237319 PMID:15845534 GO_REF:0000024 NCBI chr 7:111,224,291...111,304,963 JBrowse link
G Myo1a myosin IA involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:63,542,988...63,557,944 JBrowse link
G Myo1b myosin Ib involved_in IDA
IBA		 PMID:20080738
GO_REF:0000033
PMID:17298083		 GO_Central PMID:20080738 PMID:17298083 GO_REF:0000033, RGD:8554448, RGD:8554192 NCBI chr 9:49,690,043...49,852,373 JBrowse link
G Myo1c myosin 1C involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:60,996,642...61,019,022 JBrowse link
G Myo1d myosin ID involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:65,489,153...65,765,812 JBrowse link
G Myo1g myosin IG involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:81,386,701...81,401,843 JBrowse link
G Myo1h myosin IH involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:42,248,942...42,300,103 JBrowse link
G Myo5a myosin VA acts_upstream_of_or_within IDA
ISO		 (PMID:15007063) RGD PMID:15007063 PMID:16030255 RGD:1581734 NCBI chr 8:84,692,524...84,860,564 JBrowse link
G Myo6 myosin VI involved_in ISO
IBA		 (PMID:10519557)
GO_REF:0000033		 RGD
GO_Central		 PMID:10519557 GO_REF:0000033 NCBI chr 8:81,087,157...81,242,022 JBrowse link
G Myo7a myosin VIIA involved_in IDA
IBA
ISO		 GO_REF:0000033
(PMID:21687988)		 GO_Central
RGD		 PMID:21687988 PMID:12466270 GO_REF:0000033, RGD:633398 NCBI chr 1:152,342,611...152,414,171 JBrowse link
G Myo7b myosin VIIb involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:23,588,307...23,669,841 JBrowse link
G Myo9b myosin IXb involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000107
(PMID:11901422), (PMID:16338935), (PMID:9490638)		 UniProt
GO_Central
Ensembl
RGD		 PMID:9490638 PMID:11901422 PMID:16338935 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr16:17,945,379...18,030,114 JBrowse link
G Was WASP actin nucleation promoting factor acts_upstream_of_or_within ISO (PMID:12147689) RGD PMID:12147689 NCBI chr  X:17,077,057...17,085,802 JBrowse link
G Wasf2 WASP family member 2 acts_upstream_of_or_within ISO MGI:2670143 (PMID:12853475) RGD PMID:12853475 NCBI chr 5:150,620,733...150,685,943 JBrowse link
G Wipf1 WAS/WASL interacting protein family, member 1 involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 GO_REF:0000107
GO_REF:0000033
(PMID:12147689)		 Ensembl
GO_Central
RGD		 PMID:12147689 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:78,721,486...78,824,199 JBrowse link
actin-mediated cell contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actc1 actin, alpha, cardiac muscle 1 acts_upstream_of_or_within ISO (PMID:22750946) RGD PMID:22750946 NCBI chr 3:100,811,987...100,817,523 JBrowse link
G Emp2 epithelial membrane protein 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:18469192), (PMID:22728127)		 UniProt
RGD		 PMID:18469192 PMID:22728127 GO_REF:0000024 NCBI chr10:5,866,869...5,901,533 JBrowse link
G Myh2 myosin heavy chain 2 acts_upstream_of_or_within ISO (PMID:22750946) RGD PMID:22750946 NCBI chr10:51,856,738...51,883,236 JBrowse link
G Parva parvin, alpha involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:19798050)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:19798050 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:166,547,142...166,704,958 JBrowse link
G Pdpn podoplanin involved_in ISS
ISO		 GO_REF:0000024
(PMID:25341788)		 UniProt
RGD		 PMID:25341788 GO_REF:0000024 NCBI chr 5:155,601,691...155,635,656 JBrowse link
actin-myosin filament sliding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actc1 actin, alpha, cardiac muscle 1 involved_in ISO
IBA		 (PMID:19799913)
GO_REF:0000033		 RGD
GO_Central		 PMID:19799913 GO_REF:0000033 NCBI chr 3:100,811,987...100,817,523 JBrowse link
apical constriction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc88c coiled-coil domain containing 88C involved_in ISO (PMID:30948426) RGD PMID:30948426 NCBI chr 6:120,169,752...120,289,459 JBrowse link
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within ISO (PMID:20103536) RGD PMID:20103536 NCBI chr13:30,670,792...30,770,213 JBrowse link
G Frmd6 FERM domain containing 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:107927|MGI:2135608 (PMID:21685893)		 Ensembl
RGD		 PMID:21685893 GO_REF:0000107 NCBI chr 6:89,345,983...89,419,579 JBrowse link
G Luzp1 leucine zipper protein 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:33346378)		 UniProt
Ensembl
RGD		 PMID:33346378 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:148,706,094...148,781,616 JBrowse link
G Pard3 par-3 family cell polarity regulator acts_upstream_of_or_within ISO MGI:107927|MGI:2442579 (PMID:21685893) RGD PMID:21685893 NCBI chr19:55,080,282...55,630,111 JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2135608|MGI:2442579 (PMID:21685893)		 Ensembl
RGD		 PMID:21685893 GO_REF:0000107 NCBI chr18:1,387,360...1,509,218 JBrowse link
atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 involved_in ISO (PMID:17242276), (PMID:18832177), (PMID:21859974)
(PMID:21859974)		 RGD PMID:17242276 PMID:18832177 PMID:21859974 NCBI chr 2:218,052,555...218,628,414 JBrowse link
G Kcna5 potassium voltage-gated channel subfamily A member 5 involved_in ISO (PMID:19343045), (PMID:23264583) RGD PMID:19343045 PMID:23264583 NCBI chr 4:161,040,853...161,044,311 JBrowse link
G Kcne5 potassium voltage-gated channel subfamily E regulatory subunit 5 involved_in ISO (PMID:18313602) RGD PMID:18313602 NCBI chr  X:105,930,398...105,931,013 JBrowse link
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 involved_in ISO (PMID:12522251) RGD PMID:12522251 NCBI chr 1:207,721,134...208,054,073 JBrowse link
G Nup155 nucleoporin 155 acts_upstream_of_or_within ISO MGI:3840086 (PMID:19070573) RGD PMID:19070573 NCBI chr 2:58,927,171...58,980,162 JBrowse link
G Scn3b sodium voltage-gated channel beta subunit 3 involved_in ISO (PMID:21051419) RGD PMID:21051419 NCBI chr 8:49,527,529...49,550,019 JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 involved_in ISS
ISO		 GO_REF:0000024
(PMID:18065446)		 BHF-UCL
RGD		 PMID:18065446 GO_REF:0000024 NCBI chr 8:128,098,613...128,196,515 JBrowse link
cardiac muscle cell action potential involved in contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1c calcium voltage-gated channel subunit alpha1 C involved_in ISO
ISS		 (PMID:15454078)
GO_REF:0000024		 RGD
BHF-UCL		 PMID:15454078 GO_REF:0000024 NCBI chr 4:151,764,138...152,379,454 JBrowse link
G Cacna1d calcium voltage-gated channel subunit alpha1 D involved_in ISO
IEA		 (PMID:21131953)
GO_REF:0000107		 RGD
Ensembl		 PMID:21131953 GO_REF:0000107 NCBI chr16:5,227,157...5,521,163 JBrowse link
G Cacna1g calcium voltage-gated channel subunit alpha1 G involved_in ISS GO_REF:0000024 BHF-UCL GO_REF:0000024 NCBI chr10:79,851,886...79,919,926 JBrowse link
G Cacna2d1 calcium voltage-gated channel auxiliary subunit alpha2delta 1 involved_in ISO
IEA		 (PMID:25527503)
GO_REF:0000107		 RGD
Ensembl		 PMID:25527503 GO_REF:0000107 NCBI chr 4:19,902,324...20,330,287 JBrowse link
G Kcne1 potassium voltage-gated channel subfamily E regulatory subunit 1 involved_in ISO (PMID:10400998) RGD PMID:10400998 NCBI chr11:45,066,875...45,080,024 JBrowse link
G Kcne2 potassium voltage-gated channel subfamily E regulatory subunit 2 involved_in ISO (PMID:10219239) RGD PMID:10219239 NCBI chr11:45,003,468...45,015,942 JBrowse link
G Kcnj2 potassium inwardly-rectifying channel, subfamily J, member 2 involved_in ISO (PMID:11371347) RGD PMID:11371347 NCBI chr10:96,560,225...96,570,788 JBrowse link
G Pkp2 plakophilin 2 involved_in ISO (PMID:22889254) RGD PMID:22889254 NCBI chr11:98,165,974...98,231,916 JBrowse link
G Scn1a sodium voltage-gated channel alpha subunit 1 involved_in ISO
IEA		 (PMID:27207958)
GO_REF:0000107		 RGD
Ensembl		 PMID:27207958 GO_REF:0000107 NCBI chr 3:71,360,840...71,479,870 JBrowse link
G Scn1b sodium voltage-gated channel beta subunit 1 involved_in ISO
IBA
IEA		 (PMID:19808477)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:19808477 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:95,481,298...95,491,211 JBrowse link
G Scn2b sodium voltage-gated channel beta subunit 2 involved_in ISO
IBA		 (PMID:19808477)
GO_REF:0000033		 RGD
GO_Central		 PMID:19808477 GO_REF:0000033 NCBI chr 8:54,322,383...54,334,519 JBrowse link
G Scn3b sodium voltage-gated channel beta subunit 3 involved_in ISO (PMID:21051419) RGD PMID:21051419 NCBI chr 8:49,527,529...49,550,019 JBrowse link
G Scn4b sodium voltage-gated channel beta subunit 4 involved_in ISO
IBA		 (PMID:17592081)
GO_REF:0000033		 RGD
GO_Central		 PMID:17592081 GO_REF:0000033 NCBI chr 8:54,343,873...54,359,046 JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 involved_in ISO
ISS		 (PMID:21895525)
GO_REF:0000024		 RGD
BHF-UCL		 PMID:21895525 GO_REF:0000024 NCBI chr 8:128,098,613...128,196,515 JBrowse link
cardiac muscle cell contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc9 ATP binding cassette subfamily C member 9 involved_in
acts_upstream_of_or_within_positive_effect		 IEA
ISO		 GO_REF:0000107
MGI:6389242 (PMID:31575858)		 Ensembl
RGD		 PMID:31575858 GO_REF:0000107 NCBI chr 4:177,262,848...177,386,837 JBrowse link
G Camk2d calcium/calmodulin-dependent protein kinase II delta involved_in IDA PMID:12676814 BHF-UCL PMID:12676814 RGD:8656014 NCBI chr 2:217,698,324...217,961,898 JBrowse link
G Gsn gelsolin involved_in IEA
ISO		 GO_REF:0000107
(PMID:30568254)		 Ensembl
RGD		 PMID:30568254 GO_REF:0000107 NCBI chr 3:38,982,605...39,035,849 JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha involved_in ISO (PMID:30568254) RGD PMID:30568254 NCBI chr 2:117,103,643...117,177,411 JBrowse link
G Sgcd sarcoglycan, delta acts_upstream_of_or_within ISO MGI:2154694 (PMID:10481911) RGD PMID:10481911 NCBI chr10:31,346,480...32,328,364 JBrowse link
G Slc9a1 solute carrier family 9 member A1 IEP RGD PMID:20868366 RGD:7349316 NCBI chr 5:145,576,341...145,629,630 JBrowse link
G Uty ubiquitously transcribed tetratricopeptide repeat containing, Y-linked acts_upstream_of_or_within ISO (PMID:22192413) RGD PMID:22192413 NCBI chr  Y:942,838...1,105,313 JBrowse link
cytoplasmic actin-based contraction involved in cell motility term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Limch1 LIM and calponin homology domains 1 involved_in ISO (PMID:28228547) RGD PMID:28228547 NCBI chr14:41,466,433...41,779,477 JBrowse link
G Shtn1 shootin 1 involved_in IDA PMID:23453953 UniProt PMID:23453953 RGD:10054078 NCBI chr 1:268,108,095...268,211,947 JBrowse link
G Vil1 villin 1 involved_in ISO (PMID:15342783) RGD PMID:15342783 NCBI chr 9:75,991,141...76,018,860 JBrowse link
membrane depolarization during atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1c calcium voltage-gated channel subunit alpha1 C involved_in ISO
ISS		 (PMID:17224476)
GO_REF:0000024		 RGD
BHF-UCL		 PMID:17224476 GO_REF:0000024 NCBI chr 4:151,764,138...152,379,454 JBrowse link
G Cacnb2 calcium voltage-gated channel auxiliary subunit beta 2 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:17224476)		 BHF-UCL
Ensembl
RGD		 PMID:17224476 GO_REF:0000024 GO_REF:0000107 NCBI chr17:82,473,097...82,818,564 JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 involved_in ISO
IEA		 (PMID:18065446)
GO_REF:0000107		 RGD
Ensembl		 PMID:18065446 GO_REF:0000107 NCBI chr 8:128,098,613...128,196,515 JBrowse link
membrane repolarization during atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcna5 potassium voltage-gated channel subfamily A member 5 involved_in ISO (PMID:19343045), (PMID:23264583) RGD PMID:19343045 PMID:23264583 NCBI chr 4:161,040,853...161,044,311 JBrowse link
G Kcnj5 potassium inwardly-rectifying channel, subfamily J, member 5 involved_in ISO
IEA		 (PMID:20560207)
GO_REF:0000107		 RGD
Ensembl		 PMID:20560207 GO_REF:0000107 NCBI chr 8:38,981,598...39,011,197 JBrowse link
G Kcnn2 potassium calcium-activated channel subfamily N member 2 involved_in ISO (PMID:19139040) RGD PMID:19139040 NCBI chr18:40,004,693...40,445,043 JBrowse link
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 involved_in ISO
IEA		 (PMID:12522251), (PMID:25786344)
GO_REF:0000107		 RGD
Ensembl		 PMID:12522251 PMID:25786344 GO_REF:0000107 NCBI chr 1:207,721,134...208,054,073 JBrowse link
membrane repolarization during ventricular cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlg1 discs large MAGUK scaffold protein 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:25447080)		 Ensembl
RGD		 PMID:25447080 GO_REF:0000107 NCBI chr11:82,416,853...82,607,797 JBrowse link
G Kcnd3 potassium voltage-gated channel subfamily D member 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:195,626,316...195,843,690 JBrowse link
G Kcne1 potassium voltage-gated channel subfamily E regulatory subunit 1 involved_in ISO (PMID:9354802) RGD PMID:9354802 NCBI chr11:45,066,875...45,080,024 JBrowse link
G Kcne2 potassium voltage-gated channel subfamily E regulatory subunit 2 involved_in ISO (PMID:10219239) RGD PMID:10219239 NCBI chr11:45,003,468...45,015,942 JBrowse link
G Kcne3 potassium voltage-gated channel subfamily E regulatory subunit 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:154,523,903...154,530,865 JBrowse link
G Kcne4 potassium voltage-gated channel subfamily E regulatory subunit 4 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 9:80,243,429...80,251,533 JBrowse link
G Kcne5 potassium voltage-gated channel subfamily E regulatory subunit 5 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:105,930,398...105,931,013 JBrowse link
G Kcnh2 potassium voltage-gated channel subfamily H member 2 involved_in ISO (PMID:21536673) RGD PMID:21536673 NCBI chr 4:11,719,357...11,751,424 JBrowse link
G Kcnj8 potassium inwardly-rectifying channel, subfamily J, member 8 involved_in ISO (PMID:20558321) RGD PMID:20558321 NCBI chr 4:175,508,908...175,515,829 JBrowse link
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 involved_in
acts_upstream_of_or_within		 ISO
IBA
IEA		 (PMID:8528244)
MGI:2680653 (PMID:12766260), (PMID:15004216)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:8528244 PMID:12766260 PMID:15004216 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:207,721,134...208,054,073 JBrowse link
G Scn2b sodium voltage-gated channel beta subunit 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:54,322,383...54,334,519 JBrowse link
mitochondrion migration along actin filament term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myo19 myosin XIX acts_upstream_of_or_within ISO (PMID:19932026) RGD PMID:19932026 NCBI chr10:69,753,082...69,782,450 JBrowse link
muscle filament sliding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC102551071 myosin light polypeptide 6-like involved_in TAS PMID:2304459 HGNC-UCL PMID:2304459 RGD:8554813 NCBI chr13:9,903,286...9,903,991 JBrowse link
G Myh6 myosin heavy chain 6 involved_in IEA
ISO		 GO_REF:0000107
(PMID:16088376)		 Ensembl
RGD		 PMID:16088376 GO_REF:0000107 NCBI chr15:32,388,102...32,413,663 JBrowse link
G Myh7 myosin heavy chain 7 involved_in ISO
IBA
IEA		 (PMID:16088376), (PMID:8514894)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:8514894 PMID:16088376 GO_REF:0000033 GO_REF:0000107 NCBI chr15:32,416,525...32,439,851 JBrowse link
G Myh8 myosin heavy chain 8 involved_in ISO
IEA		 (PMID:17041932)
GO_REF:0000107		 RGD
Ensembl		 PMID:17041932 GO_REF:0000107 NCBI chr10:51,963,510...51,993,103 JBrowse link
G Myl6 myosin light chain 6 involved_in TAS PMID:2304459 HGNC-UCL PMID:2304459 RGD:8554813 NCBI chr 7:910,764...914,062 JBrowse link
G Myl6l2 myosin light chain 6 like 2 involved_in TAS PMID:2304459 HGNC-UCL PMID:2304459 RGD:8554813 NCBI chr12:29,488,091...29,488,746 JBrowse link
G Tnnt2 troponin T2, cardiac type involved_in ISO
IEA
ISS		 (PMID:12186860), (PMID:15923195)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:12186860 PMID:15923195 GO_REF:0000024 GO_REF:0000107 NCBI chr13:49,819,123...49,837,125 JBrowse link
G Tpm1 tropomyosin 1 involved_in IDA PMID:11136687 BHF-UCL PMID:11136687 RGD:1556479 NCBI chr 8:67,635,479...67,662,330 JBrowse link
myofibroblast contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epdr1 ependymin related 1 involved_in ISO (PMID:27245865) RGD PMID:27245865 NCBI chr17:45,333,932...45,358,597 JBrowse link
G Qki QKI, KH domain containing RNA binding involved_in IEA
ISO		 GO_REF:0000107
(PMID:33397958), (PMID:36627242)		 Ensembl
RGD		 PMID:33397958 PMID:36627242 GO_REF:0000107 NCBI chr 1:50,387,716...50,501,568 JBrowse link
negative regulation of cardiac muscle cell contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy10 adenylate cyclase 10 IMP RGD PMID:31754830 RGD:329403060 NCBI chr13:77,747,752...77,833,952 JBrowse link
negative regulation of hepatic stellate cell contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nos1 nitric oxide synthase 1 IDA RGD PMID:10727442 RGD:13824993 NCBI chr12:44,276,011...44,456,371 JBrowse link
negative regulation of membrane repolarization during ventricular cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcne3 potassium voltage-gated channel subfamily E regulatory subunit 3 involved_in ISO (PMID:22987075) RGD PMID:22987075 NCBI chr 1:154,523,903...154,530,865 JBrowse link
negative regulation of muscle filament sliding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dbn1 drebrin 1 IDA RGD PMID:17543276 RGD:10398727 NCBI chr17:9,150,608...9,164,982 JBrowse link
negative regulation of ventricular cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bin1 bridging integrator 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:24836577)		 Ensembl
RGD		 PMID:24836577 GO_REF:0000107 NCBI chr18:24,009,731...24,067,267 JBrowse link
nuclear migration along microfilament term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sun2 Sad1 and UNC84 domain containing 2 involved_in ISO (PMID:20724637) RGD PMID:20724637 NCBI chr 7:113,155,766...113,172,950 JBrowse link
G Syne2 spectrin repeat containing nuclear envelope protein 2 involved_in ISO (PMID:20724637) RGD PMID:20724637 NCBI chr 6:100,272,729...100,586,364 JBrowse link
positive regulation of atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trpm4 transient receptor potential cation channel, subfamily M, member 4 IMP RGD PMID:23954346 RGD:10003031 NCBI chr 1:95,781,805...95,812,095 JBrowse link
positive regulation of cardiac muscle cell contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2a1 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:181,026,606...181,044,859 JBrowse link
G Cacna1h calcium voltage-gated channel subunit alpha1 H IMP RGD PMID:19443576 RGD:7205486 NCBI chr10:14,894,630...14,952,317 JBrowse link
G Strit1 small transmembrane regulator of ion transport 1 involved_in ISO (PMID:30299255) RGD PMID:30299255 NCBI chr 2:147,935,219...147,938,083 JBrowse link
positive regulation of hepatic stellate cell contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acta2 actin alpha 2, smooth muscle IMP RGD PMID:24204762 RGD:12879446 NCBI chr 1:241,159,723...241,172,503 JBrowse link
G Mrtfa myocardin related transcription factor A IMP RGD PMID:31928221 RGD:529195969 NCBI chr 7:112,544,305...112,714,418 JBrowse link
positive regulation of membrane repolarization during ventricular cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rnf207 ring finger protein 207 acts_upstream_of ISO (PMID:25281747) RGD PMID:25281747 NCBI chr 5:162,815,351...162,828,325 JBrowse link
positive regulation of myofibroblast contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptger3 prostaglandin E receptor 3 IMP RGD PMID:19239477 RGD:10045899 NCBI chr 2:246,606,131...246,750,970 JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 IDA RGD PMID:30336567 RGD:155882532 NCBI chr 3:29,214,581...29,344,890 JBrowse link
regulation of atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 involved_in ISO (PMID:12571597) RGD PMID:12571597 NCBI chr 2:218,052,555...218,628,414 JBrowse link
G Gja5 gap junction protein, alpha 5 involved_in ISO (PMID:23348765) RGD PMID:23348765 NCBI chr 2:187,291,227...187,310,770 JBrowse link
G Ryr2 ryanodine receptor 2 involved_in ISO (PMID:17875969) RGD PMID:17875969 NCBI chr17:58,389,925...58,975,641 JBrowse link
regulation of cardiac muscle cell action potential involved in regulation of contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap9 A-kinase anchoring protein 9 involved_in ISO (PMID:18093912) RGD PMID:18093912 NCBI chr 4:31,011,475...31,147,338 JBrowse link
G Atp2a2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 involved_in IDA PMID:9851937 BHF-UCL PMID:9851937 RGD:10047146 NCBI chr12:34,072,710...34,122,142 JBrowse link
G Camk2d calcium/calmodulin-dependent protein kinase II delta involved_in IC PMID:12676813 BHF-UCL PMID:12676813 RGD:10047271 NCBI chr 2:217,698,324...217,961,898 JBrowse link
G Cav3 caveolin 3 involved_in ISO (PMID:17060380) RGD PMID:17060380 NCBI chr 4:147,137,993...147,153,967 JBrowse link
G Fgf13 fibroblast growth factor 13 involved_in ISO (PMID:21817159) RGD PMID:21817159 NCBI chr  X:137,276,498...137,800,056 JBrowse link
G Hcn4 hyperpolarization activated cyclic nucleotide-gated potassium channel 4 involved_in ISO
IEA		 (PMID:16407510)
GO_REF:0000107		 RGD
Ensembl		 PMID:16407510 GO_REF:0000107 NCBI chr 8:68,118,062...68,155,482 JBrowse link
G Rangrf RAN guanine nucleotide release factor involved_in ISO (PMID:21621375) RGD PMID:21621375 NCBI chr10:53,677,467...53,678,880 JBrowse link
regulation of cardiac muscle cell contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora1 adenosine A1 receptor IDA RGD PMID:19525381 RGD:2317914 NCBI chr13:45,658,872...45,695,821 JBrowse link
G Adrb1 adrenoceptor beta 1 IMP
IDA		 RGD PMID:22216755 PMID:19525381 RGD:6893639, RGD:2317914 NCBI chr 1:265,777,103...265,780,114 JBrowse link
G Akap6 A-kinase anchoring protein 6 involved_in IMP PMID:11179196 BHF-UCL PMID:11179196 RGD:8553373 NCBI chr 6:75,919,350...76,359,667 JBrowse link
G Ank2 ankyrin 2 involved_in ISO UniProtKB:Q8C8R3 (PMID:17242276) RGD PMID:17242276 NCBI chr 2:218,052,555...218,628,414 JBrowse link
G Atp1a1 ATPase Na+/K+ transporting subunit alpha 1 IMP RGD PMID:15629895 RGD:6903236 NCBI chr 2:191,709,311...191,737,414 JBrowse link
G Atp1a2 ATPase Na+/K+ transporting subunit alpha 2 IMP RGD PMID:17442282 RGD:6903343 NCBI chr13:84,729,597...84,754,544 JBrowse link
G Casq2 calsequestrin 2 involved_in IMP PMID:17569730 BHF-UCL PMID:17569730 RGD:2314601 NCBI chr 2:192,214,556...192,270,821 JBrowse link
G Fxyd1 FXYD domain-containing ion transport regulator 1 IMP RGD PMID:14684371 RGD:9685468 NCBI chr 1:86,287,163...86,291,478 JBrowse link
G Gata4 GATA binding protein 4 IMP RGD PMID:21702924 RGD:7207043 NCBI chr15:41,635,572...41,707,252 JBrowse link
G Kcnj2 potassium inwardly-rectifying channel, subfamily J, member 2 IMP RGD PMID:22426100 RGD:7247430 NCBI chr10:96,560,225...96,570,788 JBrowse link
G Myh7b myosin heavy chain 7B IMP RGD PMID:32207065 RGD:126925946 NCBI chr 3:144,076,911...144,122,714 JBrowse link
G Pde4b phosphodiesterase 4B involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 5:122,028,956...122,598,267 JBrowse link
G Pde4d phosphodiesterase 4D involved_in IMP
ISO		 (PMID:21670503), (PMID:21903937)
PMID:19801680		 RGD PMID:21670503 PMID:21903937 PMID:19801680 PMID:19801680 RGD:7327160, RGD:7327160 NCBI chr 2:41,748,337...43,262,567 JBrowse link
G Pln phospholamban acts_upstream_of_or_within
involved_in		 ISO MGI:2158357 (PMID:8620604)
(PMID:26673394)		 RGD PMID:8620604 PMID:26673394 NCBI chr20:33,166,512...33,182,241 JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 involved_in
acts_upstream_of_or_within		 ISO
ISS
IEA		 (PMID:22529811)
MGI:2179753 (PMID:16172272)
GO_REF:0000024
GO_REF:0000107		 RGD
BHF-UCL
Ensembl		 PMID:16172272 PMID:22529811 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:128,098,613...128,196,515 JBrowse link
G Sri sorcin involved_in ISO (PMID:12754254), (PMID:17130302) RGD PMID:12754254 PMID:17130302 NCBI chr 4:26,928,338...26,952,980 JBrowse link
G Stc1 stanniocalcin 1 involved_in ISO (PMID:12663264) RGD PMID:12663264 NCBI chr15:44,299,591...44,311,695 JBrowse link
G Sumo1 small ubiquitin-like modifier 1 involved_in ISO (PMID:21900893) RGD PMID:21900893 NCBI chr 9:61,078,790...61,108,697 JBrowse link
regulation of muscle filament sliding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mylk2 myosin light chain kinase 2 involved_in ISO
IEA		 (PMID:16448786)
GO_REF:0000107		 RGD
Ensembl		 PMID:16448786 GO_REF:0000107 NCBI chr 3:161,836,705...161,848,609 JBrowse link
regulation of muscle filament sliding speed term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnnc1 troponin C1, slow skeletal and cardiac type involved_in ISO (PMID:10747195) RGD PMID:10747195 NCBI chr16:6,400,801...6,405,634 JBrowse link
G Tnnt2 troponin T2, cardiac type involved_in IMP PMID:10747195 BHF-UCL PMID:10747195 RGD:8554013 NCBI chr13:49,819,123...49,837,125 JBrowse link
regulation of myofibroblast contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdpn podoplanin involved_in ISS
ISO		 GO_REF:0000024
(PMID:25347465)		 UniProt
RGD		 PMID:25347465 GO_REF:0000024 NCBI chr 5:155,601,691...155,635,656 JBrowse link
regulation of ventricular cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1c calcium voltage-gated channel subunit alpha1 C involved_in ISS
ISO		 GO_REF:0000024
(PMID:15454078), (PMID:26253506)		 BHF-UCL
RGD		 PMID:15454078 PMID:26253506 GO_REF:0000024 NCBI chr 4:151,764,138...152,379,454 JBrowse link
G Cav1 caveolin 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:25017399)		 Ensembl
RGD		 PMID:25017399 GO_REF:0000107 NCBI chr 4:46,606,538...46,639,616 JBrowse link
G Ctnna3 catenin alpha 3 involved_in ISO (PMID:23136403) RGD PMID:23136403 NCBI chr20:23,614,469...25,200,026 JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:25447080)		 Ensembl
RGD		 PMID:25447080 GO_REF:0000107 NCBI chr11:82,416,853...82,607,797 JBrowse link
G Dsc2 desmocollin 2 involved_in ISO (PMID:23863954) RGD PMID:23863954 NCBI chr18:11,725,466...11,757,591 JBrowse link
G Dsg2 desmoglein 2 involved_in ISO (PMID:16505173), (PMID:23381804) RGD PMID:16505173 PMID:23381804 NCBI chr18:12,121,287...12,179,590 JBrowse link
G Dsp desmoplakin involved_in ISO (PMID:12373648) RGD PMID:12373648 NCBI chr17:26,623,602...26,671,692 JBrowse link
G Jup junction plakoglobin involved_in ISO
IEA		 (PMID:17924338)
GO_REF:0000107		 RGD
Ensembl		 PMID:17924338 GO_REF:0000107 NCBI chr10:85,300,438...85,327,378 JBrowse link
G Pkp2 plakophilin 2 involved_in ISO (PMID:22889254) RGD PMID:22889254 NCBI chr11:98,165,974...98,231,916 JBrowse link
G Ryr2 ryanodine receptor 2 involved_in ISO (PMID:17875969) RGD PMID:17875969 NCBI chr17:58,389,925...58,975,641 JBrowse link
G Trpm4 transient receptor potential cation channel, subfamily M, member 4 involved_in ISO
IEA		 (PMID:27207958)
GO_REF:0000107		 RGD
Ensembl		 PMID:27207958 GO_REF:0000107 NCBI chr 1:95,781,805...95,812,095 JBrowse link
substrate-dependent cell migration, cell contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc9 ATP binding cassette subfamily C member 9 NAS RGD PMID:11967023 RGD:728123 NCBI chr 4:177,262,848...177,386,837 JBrowse link
ventricular cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 involved_in ISO (PMID:17242276) RGD PMID:17242276 NCBI chr 2:218,052,555...218,628,414 JBrowse link
G Cav3 caveolin 3 involved_in IMP PMID:22879586 BHF-UCL PMID:22879586 RGD:8553349 NCBI chr 4:147,137,993...147,153,967 JBrowse link
G Gja5 gap junction protein, alpha 5 acts_upstream_of_or_within ISO MGI:2445238 (PMID:9501070) RGD PMID:9501070 NCBI chr 2:187,291,227...187,310,770 JBrowse link
G Gpd1l glycerol-3-phosphate dehydrogenase 1 like involved_in ISO (PMID:17967977), (PMID:19666841) RGD PMID:17967977 PMID:19666841 NCBI chr 8:114,591,103...114,620,771 JBrowse link
G Kcne1 potassium voltage-gated channel subfamily E regulatory subunit 1 involved_in ISO
IBA		 (PMID:9354802)
GO_REF:0000033		 RGD
GO_Central		 PMID:9354802 GO_REF:0000033 NCBI chr11:45,066,875...45,080,024 JBrowse link
G Kcne2 potassium voltage-gated channel subfamily E regulatory subunit 2 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:10219239)
MGI:3699589 (PMID:18603586)
GO_REF:0000033		 RGD
GO_Central		 PMID:10219239 PMID:18603586 GO_REF:0000033 NCBI chr11:45,003,468...45,015,942 JBrowse link
G Kcne3 potassium voltage-gated channel subfamily E regulatory subunit 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:154,523,903...154,530,865 JBrowse link
G Kcne4 potassium voltage-gated channel subfamily E regulatory subunit 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:80,243,429...80,251,533 JBrowse link
G Kcne5 potassium voltage-gated channel subfamily E regulatory subunit 5 involved_in ISO
IBA		 (PMID:21493962)
GO_REF:0000033		 RGD
GO_Central		 PMID:21493962 GO_REF:0000033 NCBI chr  X:105,930,398...105,931,013 JBrowse link
G Kcnh2 potassium voltage-gated channel subfamily H member 2 involved_in ISO (PMID:21536673) RGD PMID:21536673 NCBI chr 4:11,719,357...11,751,424 JBrowse link
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 involved_in ISO (PMID:8528244) RGD PMID:8528244 NCBI chr 1:207,721,134...208,054,073 JBrowse link
G Nedd4l NEDD4 like E3 ubiquitin protein ligase involved_in IMP PMID:22879586 BHF-UCL PMID:22879586 RGD:8553349 NCBI chr18:58,393,759...58,726,709 JBrowse link
G Pkp2 plakophilin 2 involved_in ISO (PMID:22889254) RGD PMID:22889254 NCBI chr11:98,165,974...98,231,916 JBrowse link
G Ryr2 ryanodine receptor 2 involved_in ISO (PMID:17872467) RGD PMID:17872467 NCBI chr17:58,389,925...58,975,641 JBrowse link
G Scn3b sodium voltage-gated channel beta subunit 3 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:20042427)
MGI:5294639 (PMID:19351516)
GO_REF:0000033		 RGD
GO_Central		 PMID:19351516 PMID:20042427 GO_REF:0000033 NCBI chr 8:49,527,529...49,550,019 JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 involved_in ISO
IEA		 (PMID:22529811)
GO_REF:0000107		 RGD
Ensembl		 PMID:22529811 GO_REF:0000107 NCBI chr 8:128,098,613...128,196,515 JBrowse link
G Snta1 syntrophin, alpha 1 involved_in ISO
IBA		 (PMID:18591664)
GO_REF:0000033		 RGD
GO_Central		 PMID:18591664 GO_REF:0000033 NCBI chr 3:163,336,509...163,366,954 JBrowse link
vesicle transport along actin filament term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn4 actinin alpha 4 involved_in ISO
IEA		 (PMID:25918384)
GO_REF:0000107		 RGD
Ensembl		 PMID:25918384 GO_REF:0000107 NCBI chr 1:84,182,783...84,251,867 JBrowse link
G Fnbp1l formin binding protein 1-like involved_in ISO (PMID:20730103) RGD PMID:20730103 NCBI chr 2:210,647,241...210,748,203 JBrowse link
G Myo1c myosin 1C involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:12490950)		 Ensembl
RGD		 PMID:12490950 GO_REF:0000107 NCBI chr10:60,996,642...61,019,022 JBrowse link
G Myo5a myosin VA involved_in IMP
IEA
ISO		 GO_REF:0000107
(PMID:24006491)		 Ensembl
RGD		 PMID:24006491 PMID:16190983 PMID:11470781 GO_REF:0000107, RGD:1600832, RGD:2306437 NCBI chr 8:84,692,524...84,860,564 JBrowse link
G Wasl WASP like actin nucleation promoting factor involved_in IDA PMID:20730103 BHF-UCL PMID:20730103 RGD:8554834 NCBI chr 4:54,049,081...54,097,653 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20534
    cellular process 19523
      actin filament-based process 856
        actin filament-based movement 129
          actin-mediated cell contraction + 106
          mitochondrion migration along actin filament 1
          nuclear migration along microfilament 2
          positive regulation of actin filament-based movement + 7
          regulation of actin filament-based movement + 52
          vesicle transport along actin filament + 5
paths to the root