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ONTOLOGY REPORT - ANNOTATIONS


Term:neurogenesis
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Accession:GO:0022008 term browser browse the term
Definition:Generation of cells within the nervous system.
Synonyms:exact_synonym: nervous system cell generation
 related_synonym: neural cell differentiation
 xref: Wikipedia:Neurogenesis


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neurogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrd1 adhesion G protein-coupled receptor D1 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624747:27,326,800...27,411,768
Ensembl chrNW_004624747:27,326,851...27,411,931
JBrowse link
G Adgrg4 adhesion G protein-coupled receptor G4 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624808:10,732,068...10,837,678
Ensembl chrNW_004624808:10,738,181...10,851,641
JBrowse link
G Adgrg6 adhesion G protein-coupled receptor G6 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624753:11,676,967...11,807,444
Ensembl chrNW_004624753:11,682,165...11,806,318
JBrowse link
G Adgrv1 adhesion G protein-coupled receptor V1 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624743:9,849,070...10,292,392 JBrowse link
G Ankrd11 ankyrin repeat domain containing 11 acts_upstream_of_or_within ISO (PMID:25556659) MGI PMID:25556659 NCBI chrNW_004624746:378,123...576,809
Ensembl chrNW_004624746:461,933...577,050
JBrowse link
G Ascl1 achaete-scute family bHLH transcription factor 1 involved_in ISO (PMID:19008346) UniProt PMID:19008346 NCBI chrNW_004624750:5,487,046...5,489,399
Ensembl chrNW_004624750:5,487,053...5,493,339
JBrowse link
G Atp1a3 ATPase Na+/K+ transporting subunit alpha 3 acts_upstream_of_or_within ISO (PMID:19666602) MGI PMID:19666602 NCBI chrNW_004624907:715,109...736,040
Ensembl chrNW_004624907:715,094...736,432
JBrowse link
G Brinp1 BMP/retinoic acid inducible neural specific 1 acts_upstream_of ISO (PMID:24528488) MGI PMID:24528488 NCBI chrNW_004624760:15,902,890...16,071,513
Ensembl chrNW_004624760:15,902,858...16,075,104
JBrowse link
G Btbd1 BTB domain containing 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624768:18,796,734...18,833,477 JBrowse link
G Btbd2 BTB domain containing 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624828:6,815,966...6,828,233 JBrowse link
G Btbd3 BTB domain containing 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624741:12,849,238...12,879,844 JBrowse link
G Btbd6 BTB domain containing 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624734:255,182...257,494
Ensembl chrNW_004624734:255,564...257,375
JBrowse link
G Cdk5rap2 CDK5 regulatory subunit associated protein 2 involved_in ISO (PMID:20460369) UniProt PMID:20460369 NCBI chrNW_004624760:14,736,273...14,930,168
Ensembl chrNW_004624760:14,736,104...14,930,119
JBrowse link
G Celsr1 cadherin EGF LAG seven-pass G-type receptor 1 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624752:3,426,317...3,537,219
Ensembl chrNW_004624752:3,425,901...3,535,400
JBrowse link
G Celsr2 cadherin EGF LAG seven-pass G-type receptor 2 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624772:4,990,185...5,014,008
Ensembl chrNW_004624772:4,990,178...5,014,119
JBrowse link
G Celsr3 cadherin EGF LAG seven-pass G-type receptor 3 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624730:2,650,096...2,675,930
Ensembl chrNW_004624730:2,651,756...2,675,923
JBrowse link
G Cep120 centrosomal protein 120 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17875675) Ensembl
MGI
PMID:17875675 GO_REF:0000107 NCBI chrNW_004624774:18,587,363...18,654,726
Ensembl chrNW_004624774:18,587,485...18,654,897
JBrowse link
G Chac1 ChaC glutathione specific gamma-glutamylcyclotransferase 1 involved_in ISO (PMID:22445366) UniProt PMID:22445366 NCBI chrNW_004624804:8,201,296...8,203,737
Ensembl chrNW_004624804:8,201,147...8,203,836
JBrowse link
G Cln5 CLN5 intracellular trafficking protein involved_in ISO (PMID:10992246) UniProt PMID:10992246 NCBI chrNW_004624751:23,395,284...23,404,798
Ensembl chrNW_004624751:23,396,789...23,404,906
JBrowse link
G Coq7 coenzyme Q7, hydroxylase acts_upstream_of_or_within ISO (PMID:11716496) MGI PMID:11716496 NCBI chrNW_004624782:2,682,489...2,689,662
Ensembl chrNW_004624782:2,682,486...2,689,661
JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 involved_in ISO
IEA
RGD
TreeGrafter
PMID:18434527 GO_REF:0000118 RGD:11352690 NCBI chrNW_004624732:35,473,740...35,477,482
Ensembl chrNW_004624732:35,472,760...35,477,528
JBrowse link
G Dagla diacylglycerol lipase alpha acts_upstream_of_or_within ISO (PMID:20147530) MGI PMID:20147530 NCBI chrNW_004624926:638,432...680,726
Ensembl chrNW_004624926:638,259...656,953
JBrowse link
G Daglb diacylglycerol lipase beta acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:20147530) MGI
TreeGrafter
PMID:20147530 GO_REF:0000118 NCBI chrNW_004624740:30,880,252...30,912,257
Ensembl chrNW_004624740:30,880,253...30,909,448
JBrowse link
G Dbndd2 dysbindin domain containing 2 acts_upstream_of_or_within ISO (PMID:18096156) MGI PMID:18096156 NCBI chrNW_004624790:9,091,461...9,095,889
Ensembl chrNW_004624790:9,091,461...9,095,722
JBrowse link
G Dchs1 dachsous cadherin-related 1 involved_in ISO (PMID:24056717) UniProt PMID:24056717 NCBI chrNW_004624817:8,111,714...8,147,699
Ensembl chrNW_004624817:8,111,718...8,134,342
JBrowse link
G Dorip1 dopamine receptor interacting protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:37248637) MGI
Ensembl
PMID:37248637 GO_REF:0000107 NCBI chrNW_004624731:23,595,490...23,605,374 JBrowse link
G Egfr epidermal growth factor receptor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624740:584,133...713,205
Ensembl chrNW_004624740:589,606...713,271
JBrowse link
G Eomes eomesodermin acts_upstream_of_or_within ISO (PMID:18794345) MGI PMID:18794345 NCBI chrNW_004624788:5,550,569...5,557,342
Ensembl chrNW_004624788:5,550,445...5,557,321
JBrowse link
G Ephb1 EPH receptor B1 involved_in ISO (PMID:18057206) UniProt PMID:18057206 NCBI chrNW_004624730:11,120,018...11,564,972
Ensembl chrNW_004624730:11,119,909...11,565,293
JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624795:3,373,313...3,391,509
Ensembl chrNW_004624795:3,373,000...3,391,602
JBrowse link
G Erbb3 erb-b2 receptor tyrosine kinase 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624802:11,906,279...11,925,530
Ensembl chrNW_004624802:11,905,271...11,925,707
JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624765:3,612,781...4,742,219
Ensembl chrNW_004624765:3,613,379...4,734,585
JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor involved_in ISO (PMID:24874740) UniProt PMID:24874740 NCBI chrNW_004624928:458,651...532,201
Ensembl chrNW_004624928:463,279...530,115
JBrowse link
G Etv6 ETS variant transcription factor 6 acts_upstream_of_or_within ISO (PMID:9250681) MGI PMID:9250681 NCBI chrNW_004624752:25,916,942...26,131,380
Ensembl chrNW_004624752:25,913,456...26,131,164
JBrowse link
G Fabp7 fatty acid binding protein 7 acts_upstream_of_or_within ISO (PMID:18001149) MGI PMID:18001149 NCBI chrNW_004624798:8,426,819...8,430,949
Ensembl chrNW_004624798:8,426,825...8,430,939
JBrowse link
G Fam168b family with sequence similarity 168 member B acts_upstream_of_or_within ISO (PMID:20716133) MGI PMID:20716133 NCBI chrNW_004624732:15,110,730...15,149,464
Ensembl chrNW_004624732:15,110,730...15,149,866
JBrowse link
G Fat4 FAT atypical cadherin 4 involved_in ISO (PMID:24056717) UniProt PMID:24056717 NCBI chrNW_004624777:6,095,166...6,293,142
Ensembl chrNW_004624777:6,095,643...6,292,980
JBrowse link
G Fgf13 fibroblast growth factor 13 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:34010636) Ensembl
MGI
PMID:34010636 GO_REF:0000107 NCBI chrNW_004624808:7,577,422...8,091,216
Ensembl chrNW_004624808:7,578,286...8,091,811
JBrowse link
G Foxg1 forkhead box G1 acts_upstream_of_or_within ISO (PMID:18184563) MGI PMID:18184563 NCBI chrNW_004624820:3,542,767...3,547,180
Ensembl chrNW_004624820:3,543,687...3,545,147
JBrowse link
G Ftsj1 FtsJ RNA 2'-O-methyltransferase 1 involved_in ISO (PMID:36720500) UniProt PMID:36720500 NCBI chrNW_004624893:297,312...308,772
Ensembl chrNW_004624893:299,020...303,773
JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A acts_upstream_of_or_within ISO (PMID:12941447) MGI PMID:12941447 NCBI chrNW_004624824:7,128,169...7,513,360
Ensembl chrNW_004624824:7,137,909...7,507,910
JBrowse link
G Hmga1 high mobility group AT-hook 1 acts_upstream_of_or_within ISO (PMID:22797695) MGI PMID:22797695 NCBI chrNW_004624754:22,888,052...22,900,685
Ensembl chrNW_004624754:22,892,226...22,898,807
JBrowse link
G Htt huntingtin acts_upstream_of_or_within ISO (PMID:11062468) MGI PMID:11062468 NCBI chrNW_004624755:24,602,955...24,729,584
Ensembl chrNW_004624755:24,603,490...24,729,333
JBrowse link
G Ift20 intraflagellar transport 20 acts_upstream_of_or_within ISO (PMID:21734285) MGI PMID:21734285 NCBI chrNW_004624786:928,123...939,515 JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISO (PMID:30655546) MGI PMID:30655546 NCBI chrNW_004624767:20,668,759...20,675,367
Ensembl chrNW_004624767:20,666,763...20,675,164
JBrowse link
G Kat8 lysine acetyltransferase 8 involved_in ISO (PMID:31794431) UniProt PMID:31794431 NCBI chrNW_004624782:14,157,905...14,169,231
Ensembl chrNW_004624782:14,157,823...14,169,231
JBrowse link
G Kiaa0319 KIAA0319 ortholog NOT|acts_upstream_of_or_within ISO (PMID:27510895) MGI PMID:27510895 NCBI chrNW_004624756:2,377,573...2,464,766
Ensembl chrNW_004624756:2,377,846...2,459,936
JBrowse link
G Lemd2 LEM domain nuclear envelope protein 2 involved_in ISO (PMID:25790465) UniProt PMID:25790465 NCBI chrNW_004624754:23,159,234...23,173,452
Ensembl chrNW_004624754:23,158,985...23,173,885
JBrowse link
G Lhx2 LIM homeobox 2 acts_upstream_of_or_within ISO (PMID:18184563) MGI PMID:18184563 NCBI chrNW_004624760:10,951,837...10,982,592 JBrowse link
G Lig4 DNA ligase 4 acts_upstream_of ISO (PMID:16777961)
(PMID:10716994), (PMID:9875844)
MGI PMID:9875844 PMID:10716994 PMID:16777961 NCBI chrNW_004624793:3,699,394...3,706,591
Ensembl chrNW_004624793:3,699,506...3,706,073
JBrowse link
G Lmnb1 lamin B1 ISO RGD PMID:17432957 RGD:10044251 NCBI chrNW_004624774:14,806,585...14,863,543
Ensembl chrNW_004624774:14,805,465...14,863,241
JBrowse link
G LOC101702239 BTB/POZ domain-containing protein 3-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004625141:13,733...15,478 JBrowse link
G LOC101715424 tubulin alpha-1B chain-like involved_in ISO (PMID:31386652)
(PMID:21041996)
MGI PMID:21041996 PMID:31386652 NCBI chrNW_004624816:3,001,252...3,006,166 JBrowse link
G Lpar1 lysophosphatidic acid receptor 1 ISO RGD PMID:9753172 RGD:2317716 NCBI chrNW_004624758:518,070...668,915
Ensembl chrNW_004624758:519,249...669,471
JBrowse link
G Marcks myristoylated alanine rich protein kinase C substrate involved_in ISO (PMID:30655546) MGI PMID:30655546 NCBI chrNW_004624856:4,966,545...4,970,226
Ensembl chrNW_004624856:4,967,732...4,969,754
JBrowse link
G Myd88 MYD88 innate immune signal transduction adaptor acts_upstream_of_or_within ISO (PMID:18509511) MGI PMID:18509511 NCBI chrNW_004624731:2,677,259...2,681,408
Ensembl chrNW_004624731:2,677,290...2,681,489
JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within ISO (PMID:12111813), (PMID:18509511), (PMID:19409882) MGI PMID:12111813 PMID:18509511 PMID:19409882 NCBI chrNW_004624795:1,553,582...1,558,110
Ensembl chrNW_004624795:1,553,037...1,558,197
JBrowse link
G Nav1 neuron navigator 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624807:8,945,808...9,196,005
Ensembl chrNW_004624807:8,952,342...9,196,073
JBrowse link
G Nav2 neuron navigator 2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624766:11,056,877...11,417,291
Ensembl chrNW_004624766:11,170,921...11,414,050
JBrowse link
G Nav3 neuron navigator 3 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624750:19,963,321...20,792,249
Ensembl chrNW_004624750:19,964,847...20,313,424
JBrowse link
G Ndufs2 NADH:ubiquinone oxidoreductase core subunit S2 involved_in ISO (PMID:31297047) UniProt PMID:31297047 NCBI chrNW_004624794:172,543...189,031
Ensembl chrNW_004624794:172,707...185,073
JBrowse link
G Nell2 neural EGFL like 2 involved_in ISO PMID:32597395 UniProt PMID:32597395 RGD:401827137 NCBI chrNW_004624816:7,502,615...8,006,241
Ensembl chrNW_004624816:7,503,067...8,007,081
JBrowse link
G Neurog1 neurogenin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18184563) Ensembl
MGI
PMID:18184563 GO_REF:0000107 NCBI chrNW_004624733:11,497,872...11,499,957
Ensembl chrNW_004624733:11,498,249...11,498,974
JBrowse link
G Neurog2 neurogenin 2 acts_upstream_of_or_within ISO (PMID:19050759) MGI PMID:19050759 NCBI chrNW_004624838:6,324,036...6,325,511 JBrowse link
G Nfia nuclear factor I A acts_upstream_of_or_within ISO (PMID:31128945) MGI PMID:31128945 NCBI chrNW_004624742:31,895,791...32,198,156
Ensembl chrNW_004624742:31,898,892...32,189,295
JBrowse link
G Nfib nuclear factor I B acts_upstream_of_or_within ISO (PMID:31128945) MGI PMID:31128945 NCBI chrNW_004624736:18,372,418...18,586,390
Ensembl chrNW_004624736:18,377,624...18,586,424
JBrowse link
G Nfix nuclear factor I X acts_upstream_of_or_within
involved_in
ISO (PMID:31128945), (PMID:33004674)
(PMID:23042739), (PMID:23776487)
(PMID:27965439)
MGI PMID:23042739 PMID:23776487 PMID:27965439 PMID:31128945 PMID:33004674 NCBI chrNW_004624901:551,277...645,435
Ensembl chrNW_004624901:550,931...646,417
JBrowse link
G Nkx6-1 NK6 homeobox 1 ISO RGD PMID:18687784 RGD:2311166 NCBI chrNW_004624900:1,618,019...1,623,975
Ensembl chrNW_004624900:1,618,563...1,623,793
JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21697390) Ensembl
MGI
PMID:21697390 GO_REF:0000107 NCBI chrNW_004624770:8,592,473...8,642,063
Ensembl chrNW_004624770:8,592,457...8,641,843
JBrowse link
G Ntn5 netrin 5 involved_in ISO (PMID:26858598) UniProt PMID:26858598 NCBI chrNW_004624832:5,217,001...5,225,930
Ensembl chrNW_004624832:5,219,259...5,225,653
JBrowse link
G Nup133 nucleoporin 133 acts_upstream_of_or_within ISO (PMID:18539113) MGI PMID:18539113 NCBI chrNW_004624775:19,589,496...19,647,823
Ensembl chrNW_004624775:19,589,372...19,648,884
JBrowse link
G Omp olfactory marker protein acts_upstream_of_or_within ISO (PMID:18184563) MGI PMID:18184563 NCBI chrNW_004624863:179,301...189,441 JBrowse link
G Pcsk1 proprotein convertase subtilisin/kexin type 1 ISO RGD PMID:18781386 RGD:2308890 NCBI chrNW_004624743:14,993,436...15,036,512
Ensembl chrNW_004624743:14,994,172...15,036,412
JBrowse link
G Pcsk9 proprotein convertase subtilisin/kexin type 9 involved_in ISO PMID:12552133
(PMID:12552133)
HGNC-UCL PMID:12552133 RGD:629554 NCBI chrNW_004624862:4,873,457...4,895,836
Ensembl chrNW_004624862:4,879,561...4,895,776
JBrowse link
G Phgdh phosphoglycerate dehydrogenase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19114063) Ensembl
MGI
PMID:19114063 GO_REF:0000107 NCBI chrNW_004624772:15,473,609...15,514,392
Ensembl chrNW_004624772:15,473,221...15,514,637
JBrowse link
G Prdm12 PR/SET domain 12 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:19050759) MGI
TreeGrafter
PMID:19050759 GO_REF:0000118 NCBI chrNW_004624760:5,048,760...5,063,504
Ensembl chrNW_004624760:5,049,666...5,063,161
JBrowse link
G Prdm13 PR/SET domain 13 acts_upstream_of_or_within ISO (PMID:19050759) MGI PMID:19050759 NCBI chrNW_004624810:5,421,231...5,428,863
Ensembl chrNW_004624810:5,421,522...5,428,848
JBrowse link
G Prdm16 PR/SET domain 16 acts_upstream_of_or_within ISO (PMID:19050759) MGI PMID:19050759 NCBI chrNW_004624818:6,978,436...7,258,366
Ensembl chrNW_004624818:6,978,436...7,258,357
JBrowse link
G Prdm6 PR/SET domain 6 acts_upstream_of_or_within ISO (PMID:19050759) MGI PMID:19050759 NCBI chrNW_004624774:18,833,848...18,941,898
Ensembl chrNW_004624774:18,840,122...18,941,543
JBrowse link
G Prdm8 PR/SET domain 8 acts_upstream_of_or_within ISO (PMID:19050759) MGI PMID:19050759 NCBI chrNW_004624757:10,801,701...10,809,887
Ensembl chrNW_004624757:10,802,406...10,805,704
JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO (PMID:11738035)
(PMID:9160754)
MGI PMID:9160754 PMID:11738035 NCBI chrNW_004624734:28,200,358...28,272,684
Ensembl chrNW_004624734:28,200,140...28,272,743
JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 acts_upstream_of_or_within ISO (PMID:25800779) MGI PMID:25800779 NCBI chrNW_004624828:7,750,419...7,762,645
Ensembl chrNW_004624828:7,750,323...7,762,589
JBrowse link
G Rarb retinoic acid receptor beta acts_upstream_of_or_within ISO (PMID:18443282) MGI PMID:18443282 NCBI chrNW_004624788:2,738,341...3,493,140
Ensembl chrNW_004624788:3,257,697...3,493,132
JBrowse link
G Rogdi rogdi atypical leucine zipper involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624824:2,649,694...2,655,728
Ensembl chrNW_004624824:2,650,116...2,655,716
JBrowse link
G Six1 SIX homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624734:40,453,445...40,457,551
Ensembl chrNW_004624734:40,453,420...40,459,671
JBrowse link
G Slc1a1 solute carrier family 1 member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624736:9,246,348...9,325,671
Ensembl chrNW_004624736:9,246,262...9,325,485
JBrowse link
G Smarca4 SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4 acts_upstream_of_or_within ISO (PMID:22513373) MGI PMID:22513373 NCBI chrNW_004624828:2,893,075...2,985,968
Ensembl chrNW_004624828:2,893,096...2,985,968
JBrowse link
G Smarce1 SWI/SNF related BAF chromatin remodeling complex subunit E1 acts_upstream_of_or_within ISO (PMID:19781646) MGI PMID:19781646 NCBI chrNW_004624795:2,712,524...2,730,028
Ensembl chrNW_004624795:2,714,525...2,729,961
JBrowse link
G Spock1 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 involved_in ISO (PMID:10640720) UniProt PMID:10640720 NCBI chrNW_004624733:9,556,024...10,080,703
Ensembl chrNW_004624733:9,556,763...10,080,703
JBrowse link
G Tacc1 transforming acidic coiled-coil containing protein 1 acts_upstream_of_or_within ISO (PMID:17920017) MGI PMID:17920017 NCBI chrNW_004624780:4,769,270...4,886,475
Ensembl chrNW_004624780:4,771,789...4,847,317
JBrowse link
G Tacc2 transforming acidic coiled-coil containing protein 2 acts_upstream_of_or_within ISO (PMID:17920017) MGI PMID:17920017 NCBI chrNW_004624737:24,472,104...24,685,969
Ensembl chrNW_004624737:24,471,943...24,649,007
JBrowse link
G Tacc3 transforming acidic coiled-coil containing protein 3 acts_upstream_of_or_within ISO (PMID:17920017) MGI PMID:17920017 NCBI chrNW_004624755:25,683,314...25,695,102
Ensembl chrNW_004624755:25,683,137...25,692,504
JBrowse link
G Tbx2 T-box transcription factor 2 involved_in ISO (PMID:33795231) UniProt PMID:33795231 NCBI chrNW_004624871:2,428,757...2,437,447
Ensembl chrNW_004624871:2,429,407...2,437,447
JBrowse link
G Tlr4 toll like receptor 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18509511) Ensembl
MGI
PMID:18509511 GO_REF:0000107 NCBI chrNW_004624760:17,596,516...17,608,955
Ensembl chrNW_004624760:17,598,630...17,609,120
JBrowse link
G Trak1 trafficking kinesin protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624730:77,330,449...77,470,156
Ensembl chrNW_004624730:77,331,992...77,399,741
JBrowse link
G Trak2 trafficking kinesin protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624899:275,291...335,555
Ensembl chrNW_004624899:300,096...332,392
JBrowse link
G Ttyh1 tweety family member 1 acts_upstream_of_or_within ISO (PMID:31079925) MGI PMID:31079925 NCBI chrNW_004624832:2,291,561...2,305,961
Ensembl chrNW_004624832:2,291,286...2,305,927
JBrowse link
G Ulk4 unc-51 like kinase 4 acts_upstream_of_or_within ISO (PMID:27300315) MGI PMID:27300315 NCBI chrNW_004624730:77,495,705...77,876,547
Ensembl chrNW_004624730:77,495,747...77,875,622
JBrowse link
G Vxn vexin involved_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004624744:24,835,705...24,858,988
Ensembl chrNW_004624744:24,835,784...24,858,989
JBrowse link
G Wdr62 WD repeat domain 62 involved_in ISO (PMID:20890278) UniProt PMID:20890278 NCBI chrNW_004624794:10,309,855...10,358,018
Ensembl chrNW_004624794:10,310,129...10,348,686
JBrowse link
G Wnt1 Wnt family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624816:3,209,605...3,212,969
Ensembl chrNW_004624816:3,209,699...3,212,606
JBrowse link
G Wnt3a Wnt family member 3A involved_in ISO (PMID:14557550) ParkinsonsUK-UCL PMID:14557550 NCBI chrNW_004624937:816,752...845,866
Ensembl chrNW_004624937:816,759...845,458
JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO (PMID:14557550) ParkinsonsUK-UCL PMID:14557550 NCBI chrNW_004624822:1,824,378...1,843,599
Ensembl chrNW_004624822:1,825,238...1,841,288
JBrowse link
G Xrcc2 X-ray repair cross complementing 2 involved_in
acts_upstream_of
acts_upstream_of_or_within
IEA
ISO
(PMID:16777961)
(PMID:17116431)
Ensembl
MGI
PMID:16777961 PMID:17116431 GO_REF:0000107 NCBI chrNW_004624800:4,352,566...4,389,707
Ensembl chrNW_004624800:4,355,539...4,390,016
JBrowse link
G Xrcc4 X-ray repair cross complementing 4 acts_upstream_of ISO (PMID:9875844) MGI PMID:9875844 NCBI chrNW_004624743:3,299,329...3,549,182
Ensembl chrNW_004624743:3,317,351...3,552,161
JBrowse link
G Xrcc6 X-ray repair cross complementing 6 acts_upstream_of ISO (PMID:10716994) MGI PMID:10716994 NCBI chrNW_004624752:6,987,456...7,010,834
Ensembl chrNW_004624752:6,979,271...7,010,787
JBrowse link
adrenal chromaffin cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within ISO (PMID:12361965) MGI PMID:12361965 NCBI chrNW_004624750:5,487,046...5,489,399
Ensembl chrNW_004624750:5,487,053...5,493,339
JBrowse link
G Insm1 INSM transcriptional repressor 1 involved_in ISO (PMID:18094025) UniProt PMID:18094025 NCBI chrNW_004624741:20,862,835...20,866,176
Ensembl chrNW_004624741:20,863,088...20,864,584
JBrowse link
amacrine cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Barhl2 BarH like homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14998930) Ensembl
MGI
PMID:14998930 GO_REF:0000107 NCBI chrNW_004624742:7,027,122...7,033,342
Ensembl chrNW_004624742:7,027,069...7,034,308
JBrowse link
G Bhlhe22 basic helix-loop-helix family member e22 acts_upstream_of_or_within ISO (PMID:17092954) MGI PMID:17092954 NCBI chrNW_004624744:27,008,292...27,009,602
Ensembl chrNW_004624744:27,008,471...27,009,583
JBrowse link
G Foxn4 forkhead box N4 acts_upstream_of_or_within
involved_in
ISO (PMID:15363391) MGI
UniProt
PMID:15363391 NCBI chrNW_004624747:11,122,463...11,149,505
Ensembl chrNW_004624747:11,123,615...11,149,571
JBrowse link
G Gdf11 growth differentiation factor 11 acts_upstream_of ISO (PMID:15976303) MGI PMID:15976303 NCBI chrNW_004624802:12,259,971...12,269,440 JBrowse link
G Hes1 hes family bHLH transcription factor 1 acts_upstream_of ISO (PMID:16038893) MGI PMID:16038893 NCBI chrNW_004624730:63,563,848...63,566,303
Ensembl chrNW_004624730:63,563,754...63,566,781
JBrowse link
G Ikzf1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO (PMID:25654255) MGI PMID:25654255 NCBI chrNW_004624740:3,785,342...3,875,892
Ensembl chrNW_004624740:3,785,209...3,875,841
JBrowse link
G Neurod1 neuronal differentiation 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624844:3,493,819...3,497,814
Ensembl chrNW_004624844:3,494,677...3,497,759
JBrowse link
G Neurod4 neuronal differentiation 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624983:79,564...89,114
Ensembl chrNW_004624983:85,494...86,486
JBrowse link
G Ptf1a pancreas associated transcription factor 1a acts_upstream_of_or_within
involved_in
ISO (PMID:17301087)
(PMID:17075007)
MGI
UniProt
PMID:17075007 PMID:17301087 NCBI chrNW_004624796:5,548,982...5,550,563
Ensembl chrNW_004624796:5,549,184...5,550,439
JBrowse link
G Rorb RAR related orphan receptor B involved_in ISO (PMID:23652001) UniProt PMID:23652001 NCBI chrNW_004624811:2,076,474...2,281,933
Ensembl chrNW_004624811:2,076,437...2,277,040
JBrowse link
G Tgif1 TGFB induced factor homeobox 1 acts_upstream_of ISO (PMID:18973577) MGI PMID:18973577 NCBI chrNW_004624770:13,506,501...13,515,388
Ensembl chrNW_004624770:13,508,409...13,516,457
JBrowse link
G Tgif2 TGFB induced factor homeobox 2 acts_upstream_of ISO (PMID:18926818) MGI PMID:18926818 NCBI chrNW_004624842:2,909,016...2,926,555 JBrowse link
anterior commissure morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family member e22 acts_upstream_of_or_within ISO (PMID:22284184) MGI PMID:22284184 NCBI chrNW_004624744:27,008,292...27,009,602
Ensembl chrNW_004624744:27,008,471...27,009,583
JBrowse link
G Draxin dorsal inhibitory axon guidance protein involved_in ISO (PMID:23206892) UniProt PMID:23206892 NCBI chrNW_004624818:1,253,968...1,274,418
Ensembl chrNW_004624818:1,256,169...1,263,904
JBrowse link
G Fbxo45 F-box protein 45 acts_upstream_of_or_within ISO (PMID:19398581) MGI PMID:19398581 NCBI chrNW_004624730:61,667,177...61,684,162 JBrowse link
G Nfib nuclear factor I B involved_in ISO (PMID:19961580) UniProt PMID:19961580 NCBI chrNW_004624736:18,372,418...18,586,390
Ensembl chrNW_004624736:18,377,624...18,586,424
JBrowse link
G Nr2e1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of_or_within ISO (PMID:11997145) MGI PMID:11997145 NCBI chrNW_004624780:14,098,144...14,119,791
Ensembl chrNW_004624780:14,098,360...14,119,772
JBrowse link
G Plxna4 plexin A4 acts_upstream_of_or_within ISO (PMID:15814794) MGI PMID:15814794 NCBI chrNW_004624783:3,831,320...4,292,594
Ensembl chrNW_004624783:3,658,835...4,285,638
JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan acts_upstream_of_or_within
involved_in
ISO (PMID:21055390)
(PMID:23206892)
MGI
UniProt
PMID:21055390 PMID:23206892 NCBI chrNW_004624817:364,543...379,742
Ensembl chrNW_004624817:366,101...373,034
JBrowse link
G Wdr47 WD repeat domain 47 acts_upstream_of_or_within ISO (PMID:29078390) MGI PMID:29078390 NCBI chrNW_004624772:4,749,748...4,821,490
Ensembl chrNW_004624772:4,750,931...4,806,717
JBrowse link
anterior/posterior axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dcc DCC netrin 1 receptor acts_upstream_of_or_within ISO (PMID:18479186) MGI PMID:18479186 NCBI chrNW_004624778:15,979,350...17,225,263
Ensembl chrNW_004624778:15,979,467...17,222,039
JBrowse link
G Ntn1 netrin 1 acts_upstream_of_or_within ISO (PMID:18479186) MGI PMID:18479186 NCBI chrNW_004624786:11,508,643...11,707,060
Ensembl chrNW_004624786:11,526,050...11,703,258
JBrowse link
G Unc5a unc-5 netrin receptor A acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:18479186) MGI
TreeGrafter
PMID:18479186 GO_REF:0000118 NCBI chrNW_004624733:13,262,271...13,322,649
Ensembl chrNW_004624733:13,262,271...13,322,673
JBrowse link
G Unc5b unc-5 netrin receptor B acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:18479186) MGI
TreeGrafter
PMID:18479186 GO_REF:0000118 NCBI chrNW_004624754:5,204,875...5,280,479
Ensembl chrNW_004624754:5,204,855...5,282,170
JBrowse link
G Unc5c unc-5 netrin receptor C acts_upstream_of_or_within ISO (PMID:18479186) MGI PMID:18479186 NCBI chrNW_004624757:23,145,200...23,537,812
Ensembl chrNW_004624757:23,151,485...23,537,706
JBrowse link
apical dendrite arborization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cc2d1a coiled-coil and C2 domain containing 1A acts_upstream_of_or_within ISO (PMID:26826102) MGI PMID:26826102 NCBI chrNW_004624901:1,188,687...1,204,627
Ensembl chrNW_004624901:1,188,986...1,205,511
JBrowse link
astrocyte activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora2a adenosine A2a receptor ISO RGD PMID:12838511 RGD:1625689 NCBI chrNW_004624747:9,846,254...9,860,938
Ensembl chrNW_004624747:9,851,153...9,860,094
JBrowse link
G Ager advanced glycosylation end-product specific receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624754:24,138,086...24,140,900 JBrowse link
G Agt angiotensinogen acts_upstream_of_or_within ISO (PMID:9734405) MGI PMID:9734405 NCBI chrNW_004624775:18,846,222...18,856,093
Ensembl chrNW_004624775:18,849,118...18,855,577
JBrowse link
G App amyloid beta precursor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624745:13,904,912...14,159,374
Ensembl chrNW_004624745:13,902,577...14,159,372
JBrowse link
G Bace2 beta-secretase 2 ISO RGD PMID:21073551 RGD:13782176 NCBI chrNW_004624745:28,690,045...28,765,506
Ensembl chrNW_004624745:28,690,149...28,765,588
JBrowse link
G C1qa complement C1q A chain involved_in ISO (PMID:15269255) ARUK-UCL PMID:15269255 NCBI chrNW_004624764:7,363,615...7,366,408
Ensembl chrNW_004624764:7,363,567...7,366,617
JBrowse link
G C5ar1 complement C5a receptor 1 involved_in ISO (PMID:19561098) ARUK-UCL PMID:19561098 NCBI chrNW_004624832:6,413,169...6,423,394
Ensembl chrNW_004624832:6,414,587...6,423,394
JBrowse link
G Cntf ciliary neurotrophic factor involved_in ISO
IEA
spinal cord astrocytes RGD
TreeGrafter
PMID:11771938 GO_REF:0000118 RGD:1626172 NCBI chrNW_004624864:1,785,215...1,788,608
Ensembl chrNW_004624864:1,782,139...1,792,879
JBrowse link
G Egfr epidermal growth factor receptor ISO RGD PMID:16837601 RGD:1581900 NCBI chrNW_004624740:584,133...713,205
Ensembl chrNW_004624740:589,606...713,271
JBrowse link
G Ifng interferon gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624802:163,261...166,534
Ensembl chrNW_004624802:163,261...166,534
JBrowse link
G Ifngr1 interferon gamma receptor 1 involved_in ISO (PMID:17255335) ARUK-UCL PMID:17255335 NCBI chrNW_004624886:618,372...640,954
Ensembl chrNW_004624886:618,289...642,928
JBrowse link
G Il1b interleukin 1 beta involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:28377412) Ensembl
MGI
PMID:28377412 GO_REF:0000107 NCBI chrNW_004624749:12,852,128...12,858,478
Ensembl chrNW_004624749:12,852,021...12,858,760
JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within ISO (PMID:26607664) MGI PMID:26607664 NCBI chrNW_004624795:1,553,582...1,558,110
Ensembl chrNW_004624795:1,553,037...1,558,197
JBrowse link
G Psen1 presenilin 1 involved_in ISO (PMID:20445063) ARUK-UCL PMID:20445063 NCBI chrNW_004624734:28,200,358...28,272,684
Ensembl chrNW_004624734:28,200,140...28,272,743
JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within ISO (PMID:23680462) MGI PMID:23680462 NCBI chrNW_004624783:7,012,385...7,039,302
Ensembl chrNW_004624783:7,011,899...7,039,921
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:29073081) ARUK-UCL PMID:29073081 NCBI chrNW_004624754:17,643,397...17,649,255
Ensembl chrNW_004624754:17,643,363...17,648,231
JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 ISO RGD PMID:34852714 RGD:155882542 NCBI chrNW_004624732:44,097,348...44,226,701
Ensembl chrNW_004624732:44,101,613...44,139,997
JBrowse link
astrocyte activation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624745:13,904,912...14,159,374
Ensembl chrNW_004624745:13,902,577...14,159,372
JBrowse link
G Grn granulin precursor involved_in ISO (PMID:20026663) UniProt PMID:20026663 NCBI chrNW_004624795:704,066...708,721
Ensembl chrNW_004624795:704,252...707,165
JBrowse link
G Lrp1 LDL receptor related protein 1 involved_in ISO (PMID:23152628) ARUK-UCL PMID:23152628 NCBI chrNW_004624802:10,734,907...10,812,888
Ensembl chrNW_004624802:10,734,263...10,812,763
JBrowse link
G Psen1 presenilin 1 involved_in ISO (PMID:23152628) ARUK-UCL PMID:23152628 NCBI chrNW_004624734:28,200,358...28,272,684
Ensembl chrNW_004624734:28,200,140...28,272,743
JBrowse link
astrocyte cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apcdd1 APC down-regulated 1 acts_upstream_of_or_within ISO (PMID:22500632) MGI PMID:22500632 NCBI chrNW_004624770:18,748,299...18,776,100
Ensembl chrNW_004624770:18,725,513...18,776,613
JBrowse link
G Arhgef7 Rho guanine nucleotide exchange factor 7 ISO RGD PMID:17081755 RGD:2303059 NCBI chrNW_004624793:1,880,681...1,995,604
Ensembl chrNW_004624793:1,880,382...1,995,610
JBrowse link
G Hexb hexosaminidase subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624924:195,406...219,232
Ensembl chrNW_004624924:195,175...219,278
JBrowse link
G LOC101697988 C-C motif chemokine 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624875:2,128,569...2,130,454
Ensembl chrNW_004624875:2,128,378...2,130,538
JBrowse link
G Mmp14 matrix metallopeptidase 14 ISO RGD PMID:16265672 RGD:1582598 NCBI chrNW_004624820:9,667,371...9,677,488
Ensembl chrNW_004624820:9,667,262...9,677,774
JBrowse link
G Nr2e1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of_or_within ISO (PMID:15371513) MGI PMID:15371513 NCBI chrNW_004624780:14,098,144...14,119,791
Ensembl chrNW_004624780:14,098,360...14,119,772
JBrowse link
G Scrib scribble planar cell polarity protein ISO RGD PMID:17081755 RGD:2303059 NCBI chrNW_004624735:12,997,358...13,018,765
Ensembl chrNW_004624735:12,997,408...13,018,533
JBrowse link
astrocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ager advanced glycosylation end-product specific receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22577135) Ensembl
MGI
PMID:22577135 GO_REF:0000107 NCBI chrNW_004624754:24,138,086...24,140,900 JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in ISO (PMID:23688253) UniProt PMID:23688253 NCBI chrNW_004624850:6,135,214...6,142,975
Ensembl chrNW_004624850:6,134,908...6,143,404
JBrowse link
G Drd1 dopamine receptor D1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:17360497) MGI
Ensembl
PMID:17360497 GO_REF:0000107 NCBI chrNW_004624733:14,517,540...14,522,173
Ensembl chrNW_004624733:14,518,146...14,520,905
JBrowse link
G Eif2b5 eukaryotic translation initiation factor 2B subunit epsilon involved_in ISO (PMID:15723074) UniProt PMID:15723074 NCBI chrNW_004624730:72,417,069...72,428,194
Ensembl chrNW_004624730:72,417,856...72,428,093
JBrowse link
G Gfap glial fibrillary acidic protein acts_upstream_of_or_within ISO (PMID:11487638) MGI PMID:11487638 NCBI chrNW_004624795:395,298...400,781
Ensembl chrNW_004624795:394,436...401,231
JBrowse link
G Lamb2 laminin subunit beta 2 acts_upstream_of_or_within ISO (PMID:19907020) MGI PMID:19907020 NCBI chrNW_004624730:3,145,643...3,158,781
Ensembl chrNW_004624730:3,145,643...3,159,101
JBrowse link
G Lamc3 laminin subunit gamma 3 acts_upstream_of_or_within ISO (PMID:19907020) MGI PMID:19907020 NCBI chrNW_004624760:4,759,680...4,807,720
Ensembl chrNW_004624760:4,760,351...4,807,720
JBrowse link
G Plp1 proteolipid protein 1 acts_upstream_of_or_within ISO (PMID:24038504) MGI PMID:24038504 NCBI chrNW_004624954:135,065...150,911
Ensembl chrNW_004624954:133,105...150,953
JBrowse link
G Ror1 receptor tyrosine kinase like orphan receptor 1 ISO RGD PMID:15095375 RGD:11537371 NCBI chrNW_004624742:30,172,458...30,474,801
Ensembl chrNW_004624742:30,172,093...30,319,067
JBrowse link
G Ror2 receptor tyrosine kinase like orphan receptor 2 ISO RGD PMID:15095375 RGD:11537371 NCBI chrNW_004624868:479,303...732,723
Ensembl chrNW_004624868:479,290...731,650
JBrowse link
G S100a8 S100 calcium binding protein A8 acts_upstream_of_or_within ISO (PMID:22577135) MGI PMID:22577135 NCBI chrNW_004624885:784,528...785,623 JBrowse link
G S100a9 S100 calcium binding protein A9 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:22577135) MGI
TreeGrafter
PMID:22577135 GO_REF:0000118 NCBI chrNW_004624885:767,455...770,023
Ensembl chrNW_004624885:762,934...770,129
JBrowse link
G Tlr4 toll like receptor 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22577135) Ensembl
MGI
PMID:22577135 GO_REF:0000107 NCBI chrNW_004624760:17,596,516...17,608,955
Ensembl chrNW_004624760:17,598,630...17,609,120
JBrowse link
G Tspan2 tetraspanin 2 acts_upstream_of_or_within ISO (PMID:24038504) MGI PMID:24038504 NCBI chrNW_004624772:10,750,539...10,806,868
Ensembl chrNW_004624772:10,750,539...10,806,300
JBrowse link
G Vim vimentin acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:11487638) MGI
Ensembl
PMID:11487638 GO_REF:0000107 NCBI chrNW_004624796:10,624,672...10,632,300
Ensembl chrNW_004624796:10,623,929...10,632,600
JBrowse link
astrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc1 ATP binding cassette subfamily C member 1 (ABCC1 blood group) ISO RGD PMID:17141959 RGD:2303044 NCBI chrNW_004624782:449,217...590,306
Ensembl chrNW_004624782:449,288...591,310
JBrowse link
G Actr3 actin related protein 3 ISO RGD PMID:23843614 RGD:8553949 NCBI chrNW_004624732:31,360,804...31,427,885
Ensembl chrNW_004624732:31,361,147...31,427,811
JBrowse link
G Bmp2 bone morphogenetic protein 2 acts_upstream_of ISO (PMID:15882580) MGI PMID:15882580 NCBI chrNW_004624741:7,706,205...7,717,677
Ensembl chrNW_004624741:7,706,236...7,719,484
JBrowse link
G Cul4b cullin 4B involved_in ISO (PMID:26025376) MGI PMID:26025376 NCBI chrNW_004624931:431,835...568,609 JBrowse link
G Dab1 DAB adaptor protein 1 acts_upstream_of ISO (PMID:18848628) MGI PMID:18848628 NCBI chrNW_004624862:2,053,637...3,159,712
Ensembl chrNW_004624862:2,892,851...3,144,194
JBrowse link
G Eif2b5 eukaryotic translation initiation factor 2B subunit epsilon involved_in ISO (PMID:15723074) UniProt PMID:15723074 NCBI chrNW_004624730:72,417,069...72,428,194
Ensembl chrNW_004624730:72,417,856...72,428,093
JBrowse link
G Eomes eomesodermin involved_in ISO (PMID:30186101) MGI PMID:30186101 NCBI chrNW_004624788:5,550,569...5,557,342
Ensembl chrNW_004624788:5,550,445...5,557,321
JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of ISO (PMID:12574417) MGI PMID:12574417 NCBI chrNW_004624755:25,633,690...25,647,361
Ensembl chrNW_004624755:25,635,165...25,646,932
JBrowse link
G Gap43 growth associated protein 43 acts_upstream_of_or_within ISO (PMID:15234344) MGI PMID:15234344 NCBI chrNW_004624731:32,629,586...32,748,515
Ensembl chrNW_004624731:32,629,477...32,749,081
JBrowse link
G Hes5 hes family bHLH transcription factor 5 involved_in ISO (PMID:15156153) UniProt PMID:15156153 NCBI chrNW_004624818:7,516,279...7,517,654
Ensembl chrNW_004624818:7,516,189...7,518,734
JBrowse link
G Hmbs hydroxymethylbilane synthase ISO RGD PMID:12917623 RGD:2301689 NCBI chrNW_004624784:14,467,515...14,474,954
Ensembl chrNW_004624784:14,467,533...14,474,954
JBrowse link
G Hmga2 high mobility group AT-hook 2 acts_upstream_of ISO (PMID:18640244) MGI PMID:18640244 NCBI chrNW_004624802:2,337,344...2,468,757
Ensembl chrNW_004624802:2,337,464...2,467,990
JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of ISO (PMID:19109490) MGI PMID:19109490 NCBI chrNW_004624846:2,281,292...2,283,596
Ensembl chrNW_004624846:2,277,961...2,283,571
JBrowse link
G Id4 inhibitor of DNA binding 4, HLH protein acts_upstream_of ISO (PMID:15882580) MGI PMID:15882580 NCBI chrNW_004624756:6,816,364...6,819,144
Ensembl chrNW_004624756:6,814,842...6,819,578
JBrowse link
G Large1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO (PMID:16111892) MGI PMID:16111892 NCBI chrNW_004624750:1,190,712...1,524,051
Ensembl chrNW_004624750:1,286,336...1,527,159
JBrowse link
G Lif LIF interleukin 6 family cytokine ISO RGD PMID:17328769 RGD:2326156 NCBI chrNW_004624747:6,558,872...6,565,207
Ensembl chrNW_004624747:6,558,817...6,565,281
JBrowse link
G Mfsd8 major facilitator superfamily domain containing 8 acts_upstream_of_or_within ISO (PMID:27654426) MGI PMID:27654426 NCBI chrNW_004624777:8,831,246...8,877,881
Ensembl chrNW_004624777:8,827,851...8,877,873
JBrowse link
G Mycn MYCN proto-oncogene, bHLH transcription factor acts_upstream_of ISO (PMID:18640244) MGI PMID:18640244 NCBI chrNW_004624865:780,163...785,776 JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within ISO (PMID:12111813) MGI PMID:12111813 NCBI chrNW_004624795:1,553,582...1,558,110
Ensembl chrNW_004624795:1,553,037...1,558,197
JBrowse link
G Nf1 neurofibromin 1 acts_upstream_of ISO (PMID:10442636), (PMID:9878702)
(PMID:11297510)
MGI PMID:9878702 PMID:10442636 PMID:11297510 NCBI chrNW_004624875:3,636,762...3,959,991
Ensembl chrNW_004624875:3,636,924...3,956,576
JBrowse link
G Nfix nuclear factor I X involved_in
acts_upstream_of_or_within
ISO (PMID:29106906)
(PMID:21800304)
MGI PMID:21800304 PMID:29106906 NCBI chrNW_004624901:551,277...645,435
Ensembl chrNW_004624901:550,931...646,417
JBrowse link
G Nkx2-2 NK2 homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19258013) Ensembl
MGI
PMID:19258013 GO_REF:0000107 NCBI chrNW_004624741:21,857,911...21,860,128
Ensembl chrNW_004624741:21,852,205...21,860,040
JBrowse link
G Notch1 notch receptor 1 ISO RGD PMID:19378247 RGD:2325301 NCBI chrNW_004624760:1,636,331...1,676,398
Ensembl chrNW_004624760:1,634,702...1,676,531
JBrowse link
G Nr2e1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of ISO (PMID:14702088) MGI PMID:14702088 NCBI chrNW_004624780:14,098,144...14,119,791
Ensembl chrNW_004624780:14,098,360...14,119,772
JBrowse link
G Nr3c1 nuclear receptor subfamily 3 group C member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624774:2,496,276...2,603,894
Ensembl chrNW_004624774:2,495,304...2,602,632
JBrowse link
G Pax6 paired box 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:19258013) RGD
MGI
Ensembl
PMID:19258013 PMID:22944581 GO_REF:0000107 RGD:8552357 NCBI chrNW_004624766:20,536,581...20,554,589
Ensembl chrNW_004624766:20,536,233...20,554,759
JBrowse link
G S100b S100 calcium binding protein B ISO RGD PMID:19147496 RGD:5508832 NCBI chrNW_004624745:31,645,927...31,652,846
Ensembl chrNW_004624745:31,645,927...31,652,832
JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of ISO (PMID:10357934) MGI PMID:10357934 NCBI chrNW_004624800:2,202,986...2,215,309
Ensembl chrNW_004624800:2,203,393...2,212,068
JBrowse link
G Sox6 SRY-box transcription factor 6 ISO RGD PMID:15846364 RGD:1581115 NCBI chrNW_004624766:7,683,492...8,301,823
Ensembl chrNW_004624766:7,689,775...8,084,764
JBrowse link
G Stat3 signal transducer and activator of transcription 3 involved_in ISO (PMID:15156153) UniProt PMID:15156153 NCBI chrNW_004624795:1,648,235...1,680,788
Ensembl chrNW_004624795:1,648,080...1,681,200
JBrowse link
G Vax1 ventral anterior homeobox 1 acts_upstream_of_or_within ISO (PMID:15590934) MGI PMID:15590934 NCBI chrNW_004624737:29,489,601...29,496,548
Ensembl chrNW_004624737:29,490,936...29,496,483
JBrowse link
G Vps54 VPS54 subunit of GARP complex involved_in ISO (PMID:29890290) MGI PMID:29890290 NCBI chrNW_004624762:9,457,283...9,570,311
Ensembl chrNW_004624762:9,457,705...9,563,779
JBrowse link
astrocyte fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gcm1 glial cells missing transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14573516) Ensembl
MGI
PMID:14573516 GO_REF:0000107 NCBI chrNW_004624850:405,001...421,208
Ensembl chrNW_004624850:406,840...421,128
JBrowse link
G Sox8 SRY-box transcription factor 8 acts_upstream_of_or_within ISO (PMID:19490914) MGI PMID:19490914 NCBI chrNW_004624913:1,759,460...1,764,242
Ensembl chrNW_004624913:1,759,548...1,764,344
JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO (PMID:19490914) MGI PMID:19490914 NCBI chrNW_004624801:2,296,353...2,300,853
Ensembl chrNW_004624801:2,296,168...2,301,596
JBrowse link
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor acts_upstream_of_or_within ISO (PMID:16292311) MGI PMID:16292311 NCBI chrNW_004624859:5,586,489...5,601,225
Ensembl chrNW_004624859:5,586,977...5,601,460
JBrowse link
asymmetric neuroblast division term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgef2 Rho/Rac guanine nucleotide exchange factor 2 involved_in ISO (PMID:28453519) UniProt PMID:28453519 NCBI chrNW_004624885:1,314,885...1,362,730
Ensembl chrNW_004624885:1,311,512...1,362,730
JBrowse link
G Sox5 SRY-box transcription factor 5 involved_in ISO (PMID:23946438) UniProt PMID:23946438 NCBI chrNW_004624752:14,986,146...15,382,687
Ensembl chrNW_004624752:14,985,942...15,378,465
JBrowse link
G Tead3 TEA domain transcription factor 3 involved_in ISO (PMID:23946438) UniProt PMID:23946438 NCBI chrNW_004624754:21,971,362...21,987,128
Ensembl chrNW_004624754:21,971,445...21,986,557
JBrowse link
auditory receptor cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clrn1 clarin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19414487) Ensembl
MGI
PMID:19414487 GO_REF:0000107 NCBI chrNW_004624730:28,373,111...28,412,282
Ensembl chrNW_004624730:28,373,120...28,412,282
JBrowse link
G Elmod3 ELMO domain containing 3 acts_upstream_of_or_within ISO (PMID:31628468) MGI PMID:31628468 NCBI chrNW_004624749:17,749,004...17,774,891
Ensembl chrNW_004624749:17,749,658...17,774,891
JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO (PMID:15630379) MGI PMID:15630379 NCBI chrNW_004624780:5,161,245...5,212,641
Ensembl chrNW_004624780:5,161,073...5,213,870
JBrowse link
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 involved_in ISO (PMID:26084842) MGI PMID:26084842 NCBI chrNW_004624767:15,252,961...15,613,373
Ensembl chrNW_004624767:15,252,950...15,613,562
JBrowse link
G LOC101710247 dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624778:2,126,488...2,135,971
Ensembl chrNW_004624778:2,131,698...2,136,026
JBrowse link
G Pafah1b1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in ISO (PMID:23533177) CACAO PMID:23533177 NCBI chrNW_004624786:5,223,890...5,306,033
Ensembl chrNW_004624786:5,224,982...5,302,436
JBrowse link
G Pdzd7 PDZ domain containing 7 acts_upstream_of_or_within ISO (PMID:24334608) MGI PMID:24334608 NCBI chrNW_004624831:608,270...624,679
Ensembl chrNW_004624831:608,970...624,617
JBrowse link
G Slc4a7 solute carrier family 4 member 7 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:12808454) MGI
TreeGrafter
PMID:12808454 GO_REF:0000118 NCBI chrNW_004624788:5,239,858...5,355,186
Ensembl chrNW_004624788:5,243,807...5,355,073
JBrowse link
G Tmc1 transmembrane channel like 1 acts_upstream_of_or_within ISO (PMID:22105175) MGI PMID:22105175 NCBI chrNW_004624736:93,146...563,264
Ensembl chrNW_004624736:94,840...203,597
JBrowse link
auditory receptor cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jag2 jagged canonical Notch ligand 2 involved_in ISO (PMID:10080181) UniProt PMID:10080181 NCBI chrNW_004624734:308,371...327,496
Ensembl chrNW_004624734:308,375...327,604
JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO (PMID:19154718) MGI PMID:19154718 NCBI chrNW_004624760:1,636,331...1,676,398
Ensembl chrNW_004624760:1,634,702...1,676,531
JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region acts_upstream_of_or_within ISO (PMID:19154718) MGI PMID:19154718 NCBI chrNW_004624755:6,176,497...6,298,034
Ensembl chrNW_004624755:6,176,497...6,298,225
JBrowse link
auditory receptor cell fate determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh1 atonal bHLH transcription factor 1 acts_upstream_of_or_within ISO (PMID:16407553) MGI PMID:16407553 NCBI chrNW_004624757:21,517,650...21,519,543
Ensembl chrNW_004624757:21,517,809...21,518,864
JBrowse link
auditory receptor cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh1 atonal bHLH transcription factor 1 acts_upstream_of_or_within ISO (PMID:10364557) MGI PMID:10364557 NCBI chrNW_004624757:21,517,650...21,519,543
Ensembl chrNW_004624757:21,517,809...21,518,864
JBrowse link
auditory receptor cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within ISO (PMID:20016102) MGI PMID:20016102 NCBI chrNW_004624740:30,912,841...30,933,882
Ensembl chrNW_004624740:30,911,598...30,934,025
JBrowse link
G Scrib scribble planar cell polarity protein acts_upstream_of_or_within ISO (PMID:20215345) MGI PMID:20215345 NCBI chrNW_004624735:12,997,358...13,018,765
Ensembl chrNW_004624735:12,997,408...13,018,533
JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within ISO (PMID:20215345) MGI PMID:20215345 NCBI chrNW_004624830:268,764...334,660 JBrowse link
G Slitrk6 SLIT and NTRK like family member 6 acts_upstream_of_or_within ISO (PMID:19936227) MGI PMID:19936227 NCBI chrNW_004624779:7,030,017...7,036,581
Ensembl chrNW_004624779:7,030,395...7,036,108
JBrowse link
G Ush1c USH1 protein network component harmonin involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624766:9,097,466...9,153,602
Ensembl chrNW_004624766:9,105,990...9,153,663
JBrowse link
G Wdpcp WD repeat containing planar cell polarity effector acts_upstream_of_or_within ISO (PMID:24302887) MGI PMID:24302887 NCBI chrNW_004624762:9,901,021...10,303,217
Ensembl chrNW_004624762:9,970,904...10,303,046
JBrowse link
auditory receptor cell stereocilium organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd24 ankyrin repeat domain 24 involved_in ISO (PMID:35175278) UniProt PMID:35175278 NCBI chrNW_004624828:5,410,032...5,441,824 JBrowse link
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (PMID:11875276) MGI PMID:11875276 NCBI chrNW_004624731:4,836,109...5,190,990
Ensembl chrNW_004624731:5,029,421...5,190,996
JBrowse link
G Cdh23 cadherin related 23 acts_upstream_of_or_within ISO (PMID:15537665)
(PMID:11138008), (PMID:17050716), (PMID:23217710)
(PMID:12121736)
(PMID:7610888), (PMID:8790740), (PMID:9039475)
(PMID:11322776)
MGI PMID:7610888 PMID:8790740 PMID:9039475 PMID:11138008 PMID:11322776 More... NCBI chrNW_004624754:5,356,006...5,725,774
Ensembl chrNW_004624754:5,393,733...5,724,876
JBrowse link
G Clic5 chloride intracellular channel 5 acts_upstream_of_or_within ISO (PMID:17021174) MGI PMID:17021174 NCBI chrNW_004624754:14,335,173...14,433,721
Ensembl chrNW_004624754:14,370,425...14,434,269
JBrowse link
G Clrn1 clarin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19414487), (PMID:19423712) Ensembl
MGI
PMID:19414487 PMID:19423712 GO_REF:0000107 NCBI chrNW_004624730:28,373,111...28,412,282
Ensembl chrNW_004624730:28,373,120...28,412,282
JBrowse link
G Clrn2 clarin 2 involved_in ISO (PMID:33496845) UniProt PMID:33496845 NCBI chrNW_004624755:14,319,151...14,330,329
Ensembl chrNW_004624755:14,317,093...14,329,604
JBrowse link
G Grxcr2 glutaredoxin and cysteine rich domain containing 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:30380417) Ensembl
MGI
PMID:30380417 GO_REF:0000107 NCBI chrNW_004624774:5,344,696...5,367,009
Ensembl chrNW_004624774:5,344,696...5,367,009
JBrowse link
G Lhfpl5 LHFPL tetraspan subfamily member 5 acts_upstream_of_or_within ISO (PMID:17876667), (PMID:23217710)
(PMID:15905332)
MGI PMID:15905332 PMID:17876667 PMID:23217710 NCBI chrNW_004624754:21,744,784...21,763,161
Ensembl chrNW_004624754:21,749,312...21,762,896
JBrowse link
G Myo3a myosin IIIA involved_in ISO (PMID:26754646) MGI PMID:26754646 NCBI chrNW_004624796:2,774,153...2,983,853 JBrowse link
G Myo3b myosin IIIB involved_in ISO (PMID:26754646) MGI PMID:26754646 NCBI chrNW_004624787:7,723,491...7,915,619
Ensembl chrNW_004624787:7,685,741...8,130,810
JBrowse link
G Myo7a myosin VIIA acts_upstream_of_or_within ISO (PMID:11753415)
(PMID:12121736)
(PMID:17050716)
MGI PMID:11753415 PMID:12121736 PMID:17050716 NCBI chrNW_004624863:205,468...283,840
Ensembl chrNW_004624863:205,478...283,839
JBrowse link
G Nherf1 NHERF family PDZ scaffold protein 1 acts_upstream_of_or_within ISO (PMID:24920589) MGI PMID:24920589 NCBI chrNW_004624801:4,612,890...4,630,454
Ensembl chrNW_004624801:4,612,849...4,630,451
JBrowse link
G Pcdh15 protocadherin related 15 acts_upstream_of_or_within ISO (PMID:10978835)
(PMID:16887306)
(PMID:11124469)
(PMID:23217710)
(PMID:15537665)
MGI PMID:10978835 PMID:11124469 PMID:15537665 PMID:16887306 PMID:23217710 NCBI chrNW_004624791:9,042,311...9,992,341
Ensembl chrNW_004624791:9,195,902...9,990,131
JBrowse link
G Pdzd7 PDZ domain containing 7 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:24334608) MGI
TreeGrafter
PMID:24334608 GO_REF:0000118 NCBI chrNW_004624831:608,270...624,679
Ensembl chrNW_004624831:608,970...624,617
JBrowse link
G Pls1 plastin 1 involved_in ISO (PMID:25124451) UniProt PMID:25124451 NCBI chrNW_004624730:19,164,360...19,302,369
Ensembl chrNW_004624730:19,163,783...19,302,222
JBrowse link
G Rest RE1 silencing transcription factor involved_in ISO (PMID:29961578) UniProt PMID:29961578 NCBI chrNW_004624761:12,464,243...12,495,294 JBrowse link
G Ripor2 RHO family interacting cell polarization regulator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624756:2,133,261...2,260,133
Ensembl chrNW_004624756:2,133,339...2,247,643
JBrowse link
G Scrib scribble planar cell polarity protein acts_upstream_of_or_within ISO (PMID:20215345) MGI PMID:20215345 NCBI chrNW_004624735:12,997,358...13,018,765
Ensembl chrNW_004624735:12,997,408...13,018,533
JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within ISO (PMID:20215345) MGI PMID:20215345 NCBI chrNW_004624830:268,764...334,660 JBrowse link
G Sod1 superoxide dismutase 1 acts_upstream_of_or_within ISO (PMID:10464373), (PMID:10466888) MGI PMID:10464373 PMID:10466888 NCBI chrNW_004624745:20,032,003...20,037,958
Ensembl chrNW_004624745:20,032,011...20,037,958
JBrowse link
G Strc stereocilin acts_upstream_of_or_within
involved_in
ISO (PMID:30801007)
(PMID:21165971)
(PMID:18849963)
MGI
UniProt
PMID:18849963 PMID:21165971 PMID:30801007 NCBI chrNW_004624838:2,894,945...2,913,030
Ensembl chrNW_004624838:2,896,147...2,910,268
JBrowse link
G Tecta tectorin alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:30801007) Ensembl
MGI
PMID:30801007 GO_REF:0000107 NCBI chrNW_004624880:4,040,402...4,122,377
Ensembl chrNW_004624880:4,041,020...4,122,377
JBrowse link
G Tprn taperin acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:30380417) MGI
TreeGrafter
PMID:30380417 GO_REF:0000118 NCBI chrNW_004624760:750,833...758,329
Ensembl chrNW_004624760:750,871...758,433
JBrowse link
G Triobp TRIO and F-actin binding protein acts_upstream_of_or_within ISO (PMID:20510926) MGI PMID:20510926 NCBI chrNW_004624752:10,130,857...10,186,242 JBrowse link
G Whrn whirlin acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:27117407) MGI
TreeGrafter
PMID:27117407 GO_REF:0000118 NCBI chrNW_004624760:20,700,632...20,788,628
Ensembl chrNW_004624760:20,700,593...20,788,628
JBrowse link
axon arborization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ssna1 SS nuclear autoantigen 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624760:759,471...760,797
Ensembl chrNW_004624760:759,469...760,797
JBrowse link
axon choice point recognition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Efnb3 ephrin B3 acts_upstream_of_or_within ISO (PMID:11182083) MGI PMID:11182083 NCBI chrNW_004624786:10,297,795...10,304,363
Ensembl chrNW_004624786:10,297,807...10,304,473
JBrowse link
G Gap43 growth associated protein 43 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:7859286) MGI
TreeGrafter
PMID:7859286 GO_REF:0000118 NCBI chrNW_004624731:32,629,586...32,748,515
Ensembl chrNW_004624731:32,629,477...32,749,081
JBrowse link
axon development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank3 ankyrin 3 ISO RGD PMID:27098687 RGD:11535813 NCBI chrNW_004624791:3,299,287...3,633,631 JBrowse link
G Ap5z1 adaptor related protein complex 5 subunit zeta 1 acts_upstream_of_or_within ISO (PMID:30930081) MGI PMID:30930081 NCBI chrNW_004624740:28,509,979...28,527,813
Ensembl chrNW_004624740:28,509,230...28,527,519
JBrowse link
G Atoh1 atonal bHLH transcription factor 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624757:21,517,650...21,519,543
Ensembl chrNW_004624757:21,517,809...21,518,864
JBrowse link
G Atoh7 atonal bHLH transcription factor 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624754:2,606,689...2,610,231
Ensembl chrNW_004624754:2,605,173...2,650,354
JBrowse link
G Bhlha15 basic helix-loop-helix family member a15 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624740:31,671,820...31,676,045
Ensembl chrNW_004624740:31,672,397...31,674,205
JBrowse link
G Bhlhe22 basic helix-loop-helix family member e22 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624744:27,008,292...27,009,602
Ensembl chrNW_004624744:27,008,471...27,009,583
JBrowse link
G Bhlhe23 basic helix-loop-helix family member e23 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624741:28,762,079...28,766,989
Ensembl chrNW_004624741:28,766,303...28,766,920
JBrowse link
G Borcs7 BLOC-1 related complex subunit 7 acts_upstream_of_or_within ISO (PMID:30067980) MGI PMID:30067980 NCBI chrNW_004624831:2,179,671...2,189,215
Ensembl chrNW_004624831:2,179,724...2,188,991
JBrowse link
G Cacna1c calcium voltage-gated channel subunit alpha1 C ISO RGD PMID:22473424 RGD:10411906 NCBI chrNW_004624735:10,201,030...10,927,349
Ensembl chrNW_004624735:10,201,526...10,432,896
JBrowse link
G Camsap2 calmodulin regulated spectrin associated protein family member 2 involved_in ISO PMID:24908486
(PMID:24908486)
UniProt PMID:24908486 RGD:13441206 NCBI chrNW_004624807:9,766,238...9,879,930
Ensembl chrNW_004624807:9,766,139...9,879,513
JBrowse link
G Dcc DCC netrin 1 receptor ISO RGD PMID:22473424 RGD:10411906 NCBI chrNW_004624778:15,979,350...17,225,263
Ensembl chrNW_004624778:15,979,467...17,222,039
JBrowse link
G Ddr1 discoidin domain receptor tyrosine kinase 1 acts_upstream_of_or_within ISO (PMID:10970885) MGI PMID:10970885 NCBI chrNW_004624754:24,881,439...24,905,633
Ensembl chrNW_004624754:24,880,496...24,896,995
JBrowse link
G Dynlt1 dynein light chain Tctex-type 1 ISO RGD PMID:15992542 RGD:8553295 NCBI chrNW_004624929:969,294...976,420
Ensembl chrNW_004624929:968,823...976,414
JBrowse link
G Epb41l3 erythrocyte membrane protein band 4.1 like 3 involved_in ISO (PMID:21632923) MGI PMID:21632923 NCBI chrNW_004624770:15,092,706...15,303,990
Ensembl chrNW_004624770:15,094,969...15,287,128
JBrowse link
G Gpm6b glycoprotein M6B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624882:220,267...374,912
Ensembl chrNW_004624882:220,362...374,912
JBrowse link
G Grm7 glutamate metabotropic receptor 7 involved_in ISO (PMID:33500274) UniProt PMID:33500274 NCBI chrNW_004624773:18,088,942...19,110,838
Ensembl chrNW_004624773:18,089,300...19,109,716
JBrowse link
G Kcna1 potassium voltage-gated channel subfamily A member 1 ISO RGD PMID:22473424 RGD:10411906 NCBI chrNW_004624860:1,915,108...1,923,071
Ensembl chrNW_004624860:1,915,344...1,923,062
JBrowse link
G Kcnc4 potassium voltage-gated channel subfamily C member 4 ISO RGD PMID:22473424 RGD:10411906 NCBI chrNW_004624772:5,967,042...6,004,647
Ensembl chrNW_004624772:5,967,071...5,991,484
JBrowse link
G L1cam L1 cell adhesion molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624946:512,413...533,669
Ensembl chrNW_004624946:513,297...525,009
JBrowse link
G LOC101715227 solute carrier family 25 member 46-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624874:5,110,488...5,112,138 JBrowse link
G Map7d2 MAP7 domain containing 2 involved_in ISO PMID:30784582 UniProt PMID:30784582 RGD:596936201 NCBI chrNW_004624829:4,821,828...4,948,202
Ensembl chrNW_004624829:4,825,277...4,884,460
JBrowse link
G Mapk8ip3 mitogen-activated protein kinase 8 interacting protein 3 involved_in ISO PMID:25944905
(PMID:23576431), (PMID:25944905)
UniProt PMID:23576431 PMID:25944905 RGD:13673742 RGD:13673780 NCBI chrNW_004624913:481,236...529,083
Ensembl chrNW_004624913:481,207...529,070
JBrowse link
G Mark2 microtubule affinity regulating kinase 2 involved_in ISO PMID:16717194 ARUK-UCL PMID:16717194 RGD:13602002 NCBI chrNW_004624767:22,346,467...22,419,325 JBrowse link
G Mgarp mitochondria localized glutamic acid rich protein involved_in ISO (PMID:24323429) UniProt PMID:24323429 NCBI chrNW_004624777:19,569,376...19,582,226 JBrowse link
G Nefh neurofilament heavy chain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624747:5,806,576...5,816,158
Ensembl chrNW_004624747:5,806,645...5,815,554
JBrowse link
G Nefm neurofilament medium chain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624758:20,030,450...20,036,105 JBrowse link
G Neurod1 neuronal differentiation 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624844:3,493,819...3,497,814
Ensembl chrNW_004624844:3,494,677...3,497,759
JBrowse link
G Neurod2 neuronal differentiation 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624795:3,453,525...3,457,618
Ensembl chrNW_004624795:3,453,591...3,457,625
JBrowse link
G Neurod4 neuronal differentiation 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624983:79,564...89,114
Ensembl chrNW_004624983:85,494...86,486
JBrowse link
G Neurod6 neuronal differentiation 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624783:533,727...537,180
Ensembl chrNW_004624783:534,295...537,166
JBrowse link
G Neurog1 neurogenin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624733:11,497,872...11,499,957
Ensembl chrNW_004624733:11,498,249...11,498,974
JBrowse link
G Neurog2 neurogenin 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624838:6,324,036...6,325,511 JBrowse link
G Neurog3 neurogenin 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624754:3,817,400...3,818,047 JBrowse link
G Olig1 oligodendrocyte transcription factor 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624745:21,308,831...21,310,898
Ensembl chrNW_004624745:21,308,928...21,309,722
JBrowse link
G Olig2 oligodendrocyte transcription factor 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624745:21,270,804...21,274,225
Ensembl chrNW_004624745:21,270,965...21,272,932
JBrowse link
G Olig3 oligodendrocyte transcription factor 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624886:329,887...331,938
Ensembl chrNW_004624886:330,068...330,886
JBrowse link
G Plp1 proteolipid protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:24038504) MGI
TreeGrafter
PMID:24038504 GO_REF:0000118 NCBI chrNW_004624954:135,065...150,911
Ensembl chrNW_004624954:133,105...150,953
JBrowse link
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within ISO (PMID:20071523) MGI PMID:20071523 NCBI chrNW_004624877:3,293,980...3,328,337
Ensembl chrNW_004624877:3,292,244...3,328,660
JBrowse link
G Slc25a46 solute carrier family 25 member 46 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624743:28,584,209...28,613,397 JBrowse link
G Svbp small vasohibin binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624892:2,041,763...2,046,440
Ensembl chrNW_004624892:2,042,071...2,046,026
JBrowse link
G Tbc1d24 TBC1 domain family member 24 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:30335140) Ensembl
MGI
PMID:30335140 GO_REF:0000107 NCBI chrNW_004624824:245,717...251,603
Ensembl chrNW_004624824:243,939...254,249
JBrowse link
G Trim32 tripartite motif containing 32 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:19155210) MGI
Ensembl
PMID:19155210 GO_REF:0000107 NCBI chrNW_004624760:18,577,764...18,600,869
Ensembl chrNW_004624760:18,585,279...18,599,659
JBrowse link
G Tspan2 tetraspanin 2 acts_upstream_of_or_within ISO (PMID:24038504) MGI PMID:24038504 NCBI chrNW_004624772:10,750,539...10,806,868
Ensembl chrNW_004624772:10,750,539...10,806,300
JBrowse link
G Vash2 vasohibin 2 involved_in ISO (PMID:31324789) UniProt PMID:31324789 NCBI chrNW_004624771:18,303,632...18,334,438
Ensembl chrNW_004624771:18,303,664...18,332,674
JBrowse link
G Zpr1 ZPR1 zinc finger involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624784:12,202,519...12,212,257
Ensembl chrNW_004624784:12,202,519...12,213,120
JBrowse link
axon extension term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Auts2 activator of transcription and developmental regulator AUTS2 involved_in ISO (PMID:25533347) UniProt PMID:25533347 NCBI chrNW_004624740:10,339,411...11,463,292
Ensembl chrNW_004624740:10,341,274...10,367,075
JBrowse link
G Bdnf brain derived neurotrophic factor acts_upstream_of_or_within ISO (PMID:24035762) MGI PMID:24035762 NCBI chrNW_004624766:17,281,882...17,330,601
Ensembl chrNW_004624766:17,279,630...17,330,490
JBrowse link
G C9orf72 C9orf72-SMCR8 complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624736:31,737,606...31,787,900
Ensembl chrNW_004624736:31,751,268...31,788,253
JBrowse link
G Cdh4 cadherin 4 acts_upstream_of ISO (PMID:14586016) MGI PMID:14586016 NCBI chrNW_004624741:27,331,436...27,858,474
Ensembl chrNW_004624741:27,331,496...27,855,390
JBrowse link
G Cyfip1 cytoplasmic FMR1 interacting protein 1 involved_in ISO (PMID:16260607) UniProt PMID:16260607 NCBI chrNW_004624896:2,726,622...2,774,671
Ensembl chrNW_004624896:2,723,462...2,800,113
JBrowse link
G Dclk1 doublecortin like kinase 1 acts_upstream_of_or_within ISO (PMID:16387638) MGI PMID:16387638 NCBI chrNW_004624776:1,299,691...1,679,888
Ensembl chrNW_004624776:1,301,762...1,676,835
JBrowse link
G Dcx doublecortin acts_upstream_of_or_within ISO (PMID:16387638) MGI PMID:16387638 NCBI chrNW_004624803:4,168,556...4,304,642
Ensembl chrNW_004624803:4,168,556...4,299,979
JBrowse link
G Dvl1 dishevelled segment polarity protein 1 acts_upstream_of_or_within ISO (PMID:18716223) MGI PMID:18716223 NCBI chrNW_004624818:8,267,111...8,283,755
Ensembl chrNW_004624818:8,267,128...8,278,725
JBrowse link
G Edn1 endothelin 1 involved_in ISO (PMID:18401410) MGI PMID:18401410 NCBI chrNW_004624756:13,842,482...13,849,003
Ensembl chrNW_004624756:13,842,164...13,849,029
JBrowse link
G Edn2 endothelin 2 involved_in ISO (PMID:18401410) MGI PMID:18401410 NCBI chrNW_004624892:861,976...879,044
Ensembl chrNW_004624892:870,259...877,387
JBrowse link
G Edn3 endothelin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624741:25,658,726...25,680,763 JBrowse link
G Ednra endothelin receptor type A involved_in ISO (PMID:18401410) MGI PMID:18401410 NCBI chrNW_004624853:6,298,406...6,362,353
Ensembl chrNW_004624853:6,302,751...6,360,089
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta acts_upstream_of ISO (PMID:24623780) MGI PMID:24623780 NCBI chrNW_004624731:28,178,647...28,368,784
Ensembl chrNW_004624731:28,178,628...28,366,420
JBrowse link
G Itgb1 integrin subunit beta 1 acts_upstream_of_or_within ISO (PMID:12879062) MGI PMID:12879062 NCBI chrNW_004624805:8,748,848...8,800,259
Ensembl chrNW_004624805:8,765,949...8,802,149
JBrowse link
G Lhx2 LIM homeobox 2 acts_upstream_of_or_within ISO (PMID:21857657) MGI PMID:21857657 NCBI chrNW_004624760:10,951,837...10,982,592 JBrowse link
G Limk1 LIM domain kinase 1 acts_upstream_of ISO (PMID:16204183) MGI PMID:16204183 NCBI chrNW_004624740:13,824,930...13,847,605
Ensembl chrNW_004624740:13,823,437...13,847,808
JBrowse link
G LOC101712848 serine/threonine-protein kinase ULK2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624849:6,353,989...6,447,986
Ensembl chrNW_004624849:6,354,678...6,448,026
JBrowse link
G Map1b microtubule associated protein 1B acts_upstream_of_or_within ISO (PMID:16536727) MGI PMID:16536727 NCBI chrNW_004624905:1,198,157...1,304,128
Ensembl chrNW_004624905:1,198,205...1,304,309
JBrowse link
G Mapt microtubule associated protein tau acts_upstream_of_or_within ISO (PMID:16536727), (PMID:20338169)
(PMID:11891784)
MGI PMID:11891784 PMID:16536727 PMID:20338169 NCBI chrNW_004624849:2,320,887...2,421,099 JBrowse link
G Ndn necdin, MAGE family member involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15972963) Ensembl
MGI
PMID:15972963 GO_REF:0000107 NCBI chrNW_004624768:579,607...581,302 JBrowse link
G Ngf nerve growth factor acts_upstream_of ISO (PMID:8861722) MGI PMID:8861722 NCBI chrNW_004624772:11,009,765...11,070,050
Ensembl chrNW_004624772:11,010,845...11,070,017
JBrowse link
G Nlgn3 neuroligin 3 involved_in ISO PMID:19406211 BHF-UCL PMID:19406211 RGD:8554851 NCBI chrNW_004624903:1,437,663...1,465,955
Ensembl chrNW_004624903:1,438,428...1,463,172
JBrowse link
G Nrp1 neuropilin 1 acts_upstream_of ISO (PMID:12852851) MGI PMID:12852851 NCBI chrNW_004624805:8,438,485...8,574,845
Ensembl chrNW_004624805:8,438,498...8,574,508
JBrowse link
G Pou4f2 POU class 4 homeobox 2 acts_upstream_of_or_within ISO (PMID:11807038) MGI PMID:11807038 NCBI chrNW_004624853:5,446,575...5,448,704
Ensembl chrNW_004624853:5,446,694...5,448,637
JBrowse link
G Pou4f3 POU class 4 homeobox 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11807038) Ensembl
MGI
PMID:11807038 GO_REF:0000107 NCBI chrNW_004624774:5,821,024...5,822,351
Ensembl chrNW_004624774:5,821,024...5,822,351
JBrowse link
G Raph1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 acts_upstream_of_or_within ISO (PMID:20417104) MGI PMID:20417104 NCBI chrNW_004624765:12,867,547...12,994,605
Ensembl chrNW_004624765:12,922,083...12,990,363
JBrowse link
G Rnf6 ring finger protein 6 acts_upstream_of ISO (PMID:16204183) MGI PMID:16204183 NCBI chrNW_004624776:12,353,441...12,365,512
Ensembl chrNW_004624776:12,354,340...12,363,505
JBrowse link
G Sema3a semaphorin 3A acts_upstream_of ISO (PMID:12852851) MGI PMID:12852851 NCBI chrNW_004624739:32,104,014...32,426,980
Ensembl chrNW_004624739:32,105,824...32,309,271
JBrowse link
G Sema5a semaphorin 5A acts_upstream_of_or_within ISO (PMID:21835343) MGI PMID:21835343 NCBI chrNW_004624751:6,429,814...6,913,673
Ensembl chrNW_004624751:6,436,854...6,738,216
JBrowse link
G Sema5b semaphorin 5B acts_upstream_of_or_within ISO (PMID:21835343) MGI PMID:21835343 NCBI chrNW_004624912:1,244,801...1,370,253
Ensembl chrNW_004624912:1,244,801...1,280,609
JBrowse link
G Sema7a semaphorin 7A (JohnMiltonHagen blood group) acts_upstream_of_or_within ISO (PMID:12879062) MGI PMID:12879062 NCBI chrNW_004624781:221,821...244,854
Ensembl chrNW_004624781:221,812...248,185
JBrowse link
G Slc9a6 solute carrier family 9 member A6 acts_upstream_of_or_within ISO (PMID:24035762) MGI PMID:24035762 NCBI chrNW_004624808:11,107,125...11,157,913 JBrowse link
G Spg11 SPG11 vesicle trafficking associated, spatacsin acts_upstream_of_or_within ISO (PMID:24794856) MGI PMID:24794856 NCBI chrNW_004624804:11,569,024...11,672,037
Ensembl chrNW_004624804:11,569,150...11,670,373
JBrowse link
G Srf serum response factor acts_upstream_of ISO (PMID:24623780) MGI PMID:24623780 NCBI chrNW_004624754:16,371,995...16,381,287 JBrowse link
G Ssna1 SS nuclear autoantigen 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624760:759,471...760,797
Ensembl chrNW_004624760:759,469...760,797
JBrowse link
G Tnr tenascin R acts_upstream_of ISO (PMID:16831557) MGI PMID:16831557 NCBI chrNW_004624771:6,291,202...6,725,737
Ensembl chrNW_004624771:6,519,091...6,717,947
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:17389358) MGI
TreeGrafter
PMID:17389358 GO_REF:0000118 NCBI chrNW_004624747:27,680,994...27,697,342
Ensembl chrNW_004624747:27,681,033...27,695,966
JBrowse link
G Usp9x ubiquitin specific peptidase 9 X-linked involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23861879) Ensembl
MGI
PMID:23861879 GO_REF:0000107 NCBI chrNW_004624762:14,403,361...14,527,854
Ensembl chrNW_004624762:14,405,560...14,527,639
JBrowse link
G Vcl vinculin acts_upstream_of_or_within ISO (PMID:24623780) MGI PMID:24623780 NCBI chrNW_004624754:7,484,759...7,590,108
Ensembl chrNW_004624754:7,484,773...7,590,108
JBrowse link
axon extension involved in axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nrp1 neuropilin 1 acts_upstream_of
involved_in
ISO (PMID:9753685)
(PMID:22790009)
MGI
BHF-UCL
PMID:9753685 PMID:22790009 NCBI chrNW_004624805:8,438,485...8,574,845
Ensembl chrNW_004624805:8,438,498...8,574,508
JBrowse link
G Nrp2 neuropilin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624765:10,372,172...10,484,766
Ensembl chrNW_004624765:10,372,099...10,484,963
JBrowse link
G Plxna3 plexin A3 acts_upstream_of ISO (PMID:11683995) MGI PMID:11683995 NCBI chrNW_004624946:924,956...939,483
Ensembl chrNW_004624946:926,521...939,483
JBrowse link
G Ryk receptor like tyrosine kinase acts_upstream_of ISO (PMID:16723543) MGI PMID:16723543 NCBI chrNW_004624730:10,462,590...10,568,780 JBrowse link
G Sema3a semaphorin 3A acts_upstream_of
involved_in
ISO (PMID:7748561), (PMID:9753685)
(PMID:22790009)
(PMID:11683995)
(PMID:18550718)
MGI
BHF-UCL
PMID:7748561 PMID:9753685 PMID:11683995 PMID:18550718 PMID:22790009 NCBI chrNW_004624739:32,104,014...32,426,980
Ensembl chrNW_004624739:32,105,824...32,309,271
JBrowse link
G Sema3f semaphorin 3F acts_upstream_of
involved_in
ISO (PMID:9753685)
(PMID:22790009)
(PMID:11683995)
MGI
BHF-UCL
PMID:9753685 PMID:11683995 PMID:22790009 NCBI chrNW_004624730:4,035,909...4,064,796
Ensembl chrNW_004624730:4,035,874...4,065,667
JBrowse link
G Slit1 slit guidance ligand 1 involved_in ISO (PMID:16840550) UniProt PMID:16840550 NCBI chrNW_004624737:8,458,444...8,632,316
Ensembl chrNW_004624737:8,460,508...8,632,302
JBrowse link
G Slit2 slit guidance ligand 2 involved_in ISO (PMID:16840550) UniProt PMID:16840550 NCBI chrNW_004624755:11,470,810...11,819,800
Ensembl chrNW_004624755:11,472,377...11,819,266
JBrowse link
G Slit3 slit guidance ligand 3 involved_in ISO (PMID:16840550) UniProt PMID:16840550 NCBI chrNW_004624733:20,683,680...21,293,663
Ensembl chrNW_004624733:20,683,814...21,291,088
JBrowse link
G Smo smoothened, frizzled class receptor ISO RGD PMID:19447091 RGD:2324988 NCBI chrNW_004624783:7,012,385...7,039,302
Ensembl chrNW_004624783:7,011,899...7,039,921
JBrowse link
G Wnt5a Wnt family member 5A acts_upstream_of ISO (PMID:16723543) MGI PMID:16723543 NCBI chrNW_004624822:1,824,378...1,843,599
Ensembl chrNW_004624822:1,825,238...1,841,288
JBrowse link
axon extension involved in regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamb2 laminin subunit beta 2 acts_upstream_of_or_within ISO (PMID:9396756) MGI PMID:9396756 NCBI chrNW_004624730:3,145,643...3,158,781
Ensembl chrNW_004624730:3,145,643...3,159,101
JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 acts_upstream_of ISO (PMID:16142215) MGI PMID:16142215 NCBI chrNW_004624768:15,239,111...15,619,979
Ensembl chrNW_004624768:15,252,354...15,619,601
JBrowse link
G Tnr tenascin R acts_upstream_of ISO (PMID:16870730) MGI PMID:16870730 NCBI chrNW_004624771:6,291,202...6,725,737
Ensembl chrNW_004624771:6,519,091...6,717,947
JBrowse link
axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ablim1 actin binding LIM protein 1 acts_upstream_of_or_within ISO (PMID:11163266) MGI PMID:11163266 NCBI chrNW_004624737:31,856,202...32,169,116
Ensembl chrNW_004624737:31,943,110...32,164,451
JBrowse link
G Alcam activated leukocyte cell adhesion molecule acts_upstream_of_or_within ISO (PMID:15345243) MGI PMID:15345243 NCBI chrNW_004624731:44,092,505...44,280,022
Ensembl chrNW_004624731:44,091,769...44,280,621
JBrowse link
G Ank3 ankyrin 3 acts_upstream_of_or_within ISO (PMID:15479642) MGI PMID:15479642 NCBI chrNW_004624791:3,299,287...3,633,631 JBrowse link
G Apbb1 amyloid beta precursor protein binding family B member 1 acts_upstream_of_or_within ISO (PMID:16407979) MGI PMID:16407979 NCBI chrNW_004624817:7,913,541...7,937,945
Ensembl chrNW_004624817:7,909,468...7,936,487
JBrowse link
G Apbb2 amyloid beta precursor protein binding family B member 2 acts_upstream_of_or_within ISO (PMID:16407979) MGI PMID:16407979 NCBI chrNW_004624761:25,924,747...26,265,763
Ensembl chrNW_004624761:25,924,714...26,262,386
JBrowse link
G Arhgap35 Rho GTPase activating protein 35 involved_in ISO (PMID:11283609) UniProt PMID:11283609 NCBI chrNW_004624832:6,650,383...6,773,828
Ensembl chrNW_004624832:6,650,383...6,719,786
JBrowse link
G Arhgef25 Rho guanine nucleotide exchange factor 25 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624802:10,344,993...10,353,166
Ensembl chrNW_004624802:10,346,240...10,353,383
JBrowse link
G Artn artemin acts_upstream_of_or_within ISO (PMID:12160745) MGI PMID:12160745 NCBI chrNW_004624892:3,213,203...3,218,699
Ensembl chrNW_004624892:3,214,012...3,218,699
JBrowse link
G Arx aristaless related homeobox acts_upstream_of_or_within ISO (PMID:15677725)
(PMID:17460091)
MGI PMID:15677725 PMID:17460091 NCBI chrNW_004624897:1,279,138...1,303,210 JBrowse link
G Atoh1 atonal bHLH transcription factor 1 acts_upstream_of_or_within ISO (PMID:16145671) MGI PMID:16145671 NCBI chrNW_004624757:21,517,650...21,519,543
Ensembl chrNW_004624757:21,517,809...21,518,864
JBrowse link
G B3gnt2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 acts_upstream_of_or_within ISO (PMID:15728829), (PMID:23006775) MGI PMID:15728829 PMID:23006775 NCBI chrNW_004624762:11,202,143...11,403,617 JBrowse link
G B4gat1 beta-1,4-glucuronyltransferase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23217742) Ensembl
MGI
PMID:23217742 GO_REF:0000107 NCBI chrNW_004624767:20,033,750...20,036,019
Ensembl chrNW_004624767:20,033,747...20,036,021
JBrowse link
G Bdnf brain derived neurotrophic factor acts_upstream_of_or_within ISO (PMID:15014133) MGI PMID:15014133 NCBI chrNW_004624766:17,281,882...17,330,601
Ensembl chrNW_004624766:17,279,630...17,330,490
JBrowse link
G Bmp7 bone morphogenetic protein 7 acts_upstream_of_or_within ISO (PMID:12741987) MGI PMID:12741987 NCBI chrNW_004624741:23,658,214...23,743,227
Ensembl chrNW_004624741:23,658,004...23,737,742
JBrowse link
G Boc BOC cell adhesion associated, oncogene regulated acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:17086203) MGI
TreeGrafter
PMID:17086203 GO_REF:0000118 NCBI chrNW_004624731:35,256,658...35,330,274
Ensembl chrNW_004624731:35,256,662...35,330,266
JBrowse link
G Bsg basigin (Ok blood group) involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624828:7,913,297...7,920,891
Ensembl chrNW_004624828:7,913,099...7,920,804
JBrowse link
G Cdh4 cadherin 4 acts_upstream_of_or_within ISO (PMID:14586016) MGI PMID:14586016 NCBI chrNW_004624741:27,331,436...27,858,474
Ensembl chrNW_004624741:27,331,496...27,855,390
JBrowse link
G Cdk5r1 cyclin dependent kinase 5 regulatory subunit 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624875:538,752...542,874
Ensembl chrNW_004624875:538,790...543,044
JBrowse link
G Cdk5r2 cyclin dependent kinase 5 regulatory subunit 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624823:6,053,469...6,054,748
Ensembl chrNW_004624823:6,053,550...6,054,659
JBrowse link
G Chl1 cell adhesion molecule L1 like involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12391163) Ensembl
TreeGrafter
MGI
PMID:12391163 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624773:10,142,515...10,342,280
Ensembl chrNW_004624773:10,262,714...10,342,392
JBrowse link
G Cntn1 contactin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624917:292,404...752,017
Ensembl chrNW_004624917:471,837...750,245
JBrowse link
G Cntn2 contactin 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:18550718) MGI
TreeGrafter
PMID:18550718 GO_REF:0000118 NCBI chrNW_004624807:6,052,591...6,080,421
Ensembl chrNW_004624807:6,056,339...6,073,588
JBrowse link
G Cntn3 contactin 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624773:8,885,273...9,259,569
Ensembl chrNW_004624773:8,885,220...9,161,873
JBrowse link
G Cntn4 contactin 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624773:12,331,286...13,302,770
Ensembl chrNW_004624773:12,780,223...13,302,873
JBrowse link
G Cntn5 contactin 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624878:2,369,865...3,348,339
Ensembl chrNW_004624878:2,372,472...3,092,507
JBrowse link
G Cntn6 contactin 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624773:11,059,466...11,417,825
Ensembl chrNW_004624773:11,059,333...11,417,733
JBrowse link
G Crppa CDP-L-ribitol pyrophosphorylase A acts_upstream_of_or_within ISO (PMID:23217742) MGI PMID:23217742 NCBI chrNW_004624739:13,813,779...14,114,296
Ensembl chrNW_004624739:13,814,072...14,116,020
JBrowse link
G Csf1r colony stimulating factor 1 receptor involved_in ISO (PMID:22542597) ParkinsonsUK-UCL PMID:22542597 NCBI chrNW_004624774:9,363,156...9,391,939
Ensembl chrNW_004624774:9,363,908...9,391,986
JBrowse link
G Dag1 dystroglycan 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624730:3,417,356...3,488,300
Ensembl chrNW_004624730:3,417,347...3,488,879
JBrowse link
G Dcc DCC netrin 1 receptor ISO RGD PMID:8861902 RGD:729062 NCBI chrNW_004624778:15,979,350...17,225,263
Ensembl chrNW_004624778:15,979,467...17,222,039
JBrowse link
G Dlk1 delta like non-canonical Notch ligand 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624734:3,363,084...3,372,790
Ensembl chrNW_004624734:3,363,001...3,372,694
JBrowse link
G Dlx5 distal-less homeobox 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17804636) Ensembl
MGI
PMID:17804636 GO_REF:0000107 NCBI chrNW_004624813:3,760,890...3,765,309
Ensembl chrNW_004624813:3,760,661...3,765,517
JBrowse link
G Draxin dorsal inhibitory axon guidance protein involved_in IEA TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624818:1,253,968...1,274,418
Ensembl chrNW_004624818:1,256,169...1,263,904
JBrowse link
G Drgx dorsal root ganglia homeobox acts_upstream_of_or_within ISO (PMID:12917357) MGI PMID:12917357 NCBI chrNW_004624928:566,405...592,561
Ensembl chrNW_004624928:566,793...592,507
JBrowse link
G Dscam DS cell adhesion molecule involved_in ISO (PMID:22685302) UniProt PMID:22685302 NCBI chrNW_004624745:28,969,464...29,560,557
Ensembl chrNW_004624745:28,969,498...29,559,968
JBrowse link
G Dscaml1 DS cell adhesion molecule like 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624784:12,853,870...13,183,224
Ensembl chrNW_004624784:12,854,420...13,183,132
JBrowse link
G Dvl1 dishevelled segment polarity protein 1 acts_upstream_of_or_within ISO (PMID:18716223) MGI PMID:18716223 NCBI chrNW_004624818:8,267,111...8,283,755
Ensembl chrNW_004624818:8,267,128...8,278,725
JBrowse link
G Ece1 endothelin converting enzyme 1 involved_in ISO (PMID:30735130) MGI PMID:30735130 NCBI chrNW_004624764:6,222,301...6,318,423
Ensembl chrNW_004624764:6,221,867...6,318,477
JBrowse link
G Edn1 endothelin 1 involved_in ISO (PMID:30735130) MGI PMID:30735130 NCBI chrNW_004624756:13,842,482...13,849,003
Ensembl chrNW_004624756:13,842,164...13,849,029
JBrowse link
G Edn3 endothelin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624741:25,658,726...25,680,763 JBrowse link
G Ednra endothelin receptor type A involved_in ISO (PMID:30735130)
(PMID:18401410)
MGI PMID:18401410 PMID:30735130 NCBI chrNW_004624853:6,298,406...6,362,353
Ensembl chrNW_004624853:6,302,751...6,360,089
JBrowse link
G Efna1 ephrin A1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624885:2,382,712...2,388,805
Ensembl chrNW_004624885:2,383,045...2,389,107
JBrowse link
G Efna2 ephrin A2 involved_in ISO
IEA
RGD
TreeGrafter
PMID:17328773 GO_REF:0000118 RGD:2301727 NCBI chrNW_004624828:7,380,675...7,393,322
Ensembl chrNW_004624828:7,380,554...7,393,376
JBrowse link
G Efna3 ephrin A3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624885:2,420,610...2,428,048
Ensembl chrNW_004624885:2,421,467...2,428,011
JBrowse link
G Efna4 ephrin A4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624885:2,436,629...2,440,196
Ensembl chrNW_004624885:2,436,535...2,440,200
JBrowse link
G Efna5 ephrin A5 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:11222144)
(PMID:9614241)
MGI
Ensembl
TreeGrafter
PMID:9614241 PMID:11222144 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624743:25,336,851...25,611,698
Ensembl chrNW_004624743:25,341,132...25,611,564
JBrowse link
G Efnb1 ephrin B1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11731465) Ensembl
TreeGrafter
MGI
PMID:11731465 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624891:1,394,948...1,407,898
Ensembl chrNW_004624891:1,394,852...1,407,959
JBrowse link
G Efnb2 ephrin B2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624793:5,089,675...5,130,022
Ensembl chrNW_004624793:5,089,639...5,130,503
JBrowse link
G Efnb3 ephrin B3 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:11731465)
(PMID:12649481)
MGI
TreeGrafter
PMID:11731465 PMID:12649481 GO_REF:0000118 NCBI chrNW_004624786:10,297,795...10,304,363
Ensembl chrNW_004624786:10,297,807...10,304,473
JBrowse link
G Enah ENAH actin regulator acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:15371503)
(PMID:10069337), (PMID:15371503)
MGI
TreeGrafter
PMID:10069337 PMID:15371503 GO_REF:0000118 NCBI chrNW_004624835:6,292,808...6,442,349 JBrowse link
G Epha1 EPH receptor A1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624800:11,364,685...11,380,725
Ensembl chrNW_004624800:11,364,848...11,380,725
JBrowse link
G Epha10 EPH receptor A10 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624764:20,441,465...20,480,421 JBrowse link
G Epha2 EPH receptor A2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624764:2,265,114...2,296,032
Ensembl chrNW_004624764:2,264,945...2,296,197
JBrowse link
G Epha3 EPH receptor A3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624789:5,534,011...5,925,592
Ensembl chrNW_004624789:5,534,121...5,922,861
JBrowse link
G Epha4 EPH receptor A4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12649481)
(PMID:23144223)
Ensembl
TreeGrafter
MGI
PMID:12649481 PMID:23144223 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624823:3,555,273...3,697,794
Ensembl chrNW_004624823:3,555,288...3,698,990
JBrowse link
G Epha5 EPH receptor A5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624761:3,693,462...4,050,426
Ensembl chrNW_004624761:3,693,540...4,048,953
JBrowse link
G Epha6 EPH receptor A6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624789:9,279,440...10,211,840
Ensembl chrNW_004624789:9,281,370...10,209,495
JBrowse link
G Epha7 EPH receptor A7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624799:560,441...753,509
Ensembl chrNW_004624799:560,432...754,132
JBrowse link
G Epha8 EPH receptor A8 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624764:7,307,967...7,339,187
Ensembl chrNW_004624764:7,307,967...7,339,169
JBrowse link
G Ephb1 EPH receptor B1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:11532925)
(PMID:16701205)
(PMID:12971893)
(PMID:24997765)
MGI
TreeGrafter
PMID:11532925 PMID:12971893 PMID:16701205 PMID:24997765 GO_REF:0000118 NCBI chrNW_004624730:11,120,018...11,564,972
Ensembl chrNW_004624730:11,119,909...11,565,293
JBrowse link
G Ephb2 EPH receptor B2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:11532925) MGI
TreeGrafter
PMID:11532925 GO_REF:0000118 NCBI chrNW_004624764:7,421,818...7,599,800
Ensembl chrNW_004624764:7,421,862...7,593,482
JBrowse link
G Ephb3 EPH receptor B3 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:11532925) MGI
TreeGrafter
PMID:11532925 GO_REF:0000118 NCBI chrNW_004624730:71,964,337...71,983,021
Ensembl chrNW_004624730:71,965,108...71,982,593
JBrowse link
G Ephb4 EPH receptor B4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624740:16,320,672...16,339,454
Ensembl chrNW_004624740:16,320,697...16,339,777
JBrowse link
G Ephb6 EPH receptor B6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624800:12,069,977...12,076,992
Ensembl chrNW_004624800:12,069,908...12,074,669
JBrowse link
G Etv1 ETS variant transcription factor 1 acts_upstream_of_or_within ISO (PMID:10850491) MGI PMID:10850491 NCBI chrNW_004624739:15,943,534...16,031,704
Ensembl chrNW_004624739:15,943,495...16,029,785
JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within
acts_upstream_of_or_within_positive_effect
ISO (PMID:14605369)
(PMID:21743013)
MGI PMID:14605369 PMID:21743013 NCBI chrNW_004624763:16,126,582...16,393,476
Ensembl chrNW_004624763:16,126,938...16,392,804
JBrowse link
G Fezf1 FEZ family zinc finger 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16540508) Ensembl
MGI
PMID:16540508 GO_REF:0000107 NCBI chrNW_004624783:13,715,987...13,719,287
Ensembl chrNW_004624783:13,713,422...13,718,604
JBrowse link
G Flrt2 fibronectin leucine rich transmembrane protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21673655) Ensembl
MGI
PMID:21673655 GO_REF:0000107 NCBI chrNW_004624734:16,587,367...16,674,998
Ensembl chrNW_004624734:16,587,357...16,676,063
JBrowse link
G Flrt3 fibronectin leucine rich transmembrane protein 3 acts_upstream_of_or_within
involved_in
ISO
IEA
PMID:21673655 MGI
Ensembl
PMID:21673655 GO_REF:0000107 RGD:8554719 NCBI chrNW_004624741:15,343,304...15,355,742
Ensembl chrNW_004624741:15,343,653...15,355,727
JBrowse link
G Foxd1 forkhead box D1 acts_upstream_of_or_within ISO (PMID:15509772) MGI PMID:15509772 NCBI chrNW_004624905:2,487,981...2,490,068 JBrowse link
G Gap43 growth associated protein 43 acts_upstream_of_or_within ISO (PMID:10662636) MGI PMID:10662636 NCBI chrNW_004624731:32,629,586...32,748,515
Ensembl chrNW_004624731:32,629,477...32,749,081
JBrowse link
G Gas1 growth arrest specific 1 acts_upstream_of_or_within ISO (PMID:17504941) MGI PMID:17504941 NCBI chrNW_004624809:10,414,935...10,417,838
Ensembl chrNW_004624809:10,415,592...10,416,596
JBrowse link
G Gata3 GATA binding protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11135239) Ensembl
MGI
PMID:11135239 GO_REF:0000107 NCBI chrNW_004624775:2,985,077...3,014,567
Ensembl chrNW_004624775:2,994,164...3,015,392
JBrowse link
G Gbx2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO (PMID:11967891) MGI PMID:11967891 NCBI chrNW_004624847:1,878,946...1,881,794
Ensembl chrNW_004624847:1,879,007...1,881,669
JBrowse link
G Gdf7 growth differentiation factor 7 acts_upstream_of_or_within ISO (PMID:12639970) MGI PMID:12639970 NCBI chrNW_004624738:3,281,828...3,286,627 JBrowse link
G Gfra3 GDNF family receptor alpha 3 acts_upstream_of_or_within ISO (PMID:10482239)
(PMID:12160745)
MGI PMID:10482239 PMID:12160745 NCBI chrNW_004624743:31,079,591...31,095,595
Ensembl chrNW_004624743:31,074,302...31,096,301
JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO (PMID:10409510) MGI PMID:10409510 NCBI chrNW_004624732:24,159,407...24,381,495
Ensembl chrNW_004624732:24,159,312...24,328,452
JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO (PMID:15065125)
(PMID:20943929)
MGI PMID:15065125 PMID:20943929 NCBI chrNW_004624740:18,961,395...19,238,760
Ensembl chrNW_004624740:18,975,596...19,235,900
JBrowse link
G Kalrn kalirin RhoGEF kinase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624731:54,934...756,707
Ensembl chrNW_004624731:121,122...752,942
JBrowse link
G Klf7 KLF transcription factor 7 acts_upstream_of_or_within ISO (PMID:15964824) MGI PMID:15964824 NCBI chrNW_004624765:8,823,319...8,914,016
Ensembl chrNW_004624765:8,823,251...8,910,068
JBrowse link
G L1cam L1 cell adhesion molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12533613), (PMID:18550718)
(PMID:18550718)
(PMID:18650339)
Ensembl
MGI
PMID:12533613 PMID:18550718 PMID:18650339 GO_REF:0000107 NCBI chrNW_004624946:512,413...533,669
Ensembl chrNW_004624946:513,297...525,009
JBrowse link
G Lama1 laminin subunit alpha 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624770:16,358,952...16,490,986
Ensembl chrNW_004624770:16,359,255...16,462,817
JBrowse link
G Lama2 laminin subunit alpha 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:19295126) MGI
TreeGrafter
PMID:19295126 GO_REF:0000118 NCBI chrNW_004624753:3,194,678...3,794,145
Ensembl chrNW_004624753:3,336,227...3,793,940
JBrowse link
G Lama3 laminin subunit alpha 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624770:8,237,085...8,482,770 JBrowse link
G Lama5 laminin subunit alpha 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624741:28,156,956...28,217,133
Ensembl chrNW_004624741:28,157,172...28,217,113
JBrowse link
G Lamb1 laminin subunit beta 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624739:21,771,617...21,843,888
Ensembl chrNW_004624739:21,771,226...21,843,884
JBrowse link
G Lamb2 laminin subunit beta 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:19295126) MGI
TreeGrafter
PMID:19295126 GO_REF:0000118 NCBI chrNW_004624730:3,145,643...3,158,781
Ensembl chrNW_004624730:3,145,643...3,159,101
JBrowse link
G Lamb3 laminin subunit beta 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624807:2,320,168...2,378,349 JBrowse link
G Lamc1 laminin subunit gamma 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624814:10,572,026...10,701,805
Ensembl chrNW_004624814:10,570,356...10,701,977
JBrowse link
G Lamc2 laminin subunit gamma 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624814:10,475,629...10,536,694
Ensembl chrNW_004624814:10,476,323...10,536,724
JBrowse link
G Lamc3 laminin subunit gamma 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624760:4,759,680...4,807,720
Ensembl chrNW_004624760:4,760,351...4,807,720
JBrowse link
G Lgi1 leucine rich glioma inactivated 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624737:5,024,691...5,060,248
Ensembl chrNW_004624737:5,024,414...5,060,329
JBrowse link
G Lhx2 LIM homeobox 2 acts_upstream_of_or_within
involved_in
ISO (PMID:17493606)
(PMID:22457488)
MGI
CACAO
PMID:17493606 PMID:22457488 NCBI chrNW_004624760:10,951,837...10,982,592 JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15183721) Ensembl
MGI
PMID:15183721 GO_REF:0000107 NCBI chrNW_004624826:3,541,291...3,689,039
Ensembl chrNW_004624826:3,543,191...3,689,062
JBrowse link
G LOC101710297 olfactory receptor 10A4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21646512) Ensembl
MGI
PMID:21646512 GO_REF:0000107 NCBI chrNW_004624817:8,726,441...8,727,388
Ensembl chrNW_004624817:8,726,441...8,727,388
JBrowse link
G LOC101714860 protein enabled homolog involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624762:22,495,655...22,497,496 JBrowse link
G LOC101717337 olfactory receptor 8A1 acts_upstream_of_or_within ISO (PMID:21646512) MGI PMID:21646512 NCBI chrNW_004624927:566,203...567,135
Ensembl chrNW_004624927:566,206...567,135
JBrowse link
G LOC101717820 ephrin type-B receptor 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004626250:1...2,504 JBrowse link
G Mapk8ip3 mitogen-activated protein kinase 8 interacting protein 3 acts_upstream_of_or_within ISO (PMID:15572149) MGI PMID:15572149 NCBI chrNW_004624913:481,236...529,083
Ensembl chrNW_004624913:481,207...529,070
JBrowse link
G Matn2 matrilin 2 acts_upstream_of_or_within ISO (PMID:19295126) MGI PMID:19295126 NCBI chrNW_004624763:5,050,507...5,198,653
Ensembl chrNW_004624763:5,063,772...5,198,026
JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004624754:20,434,625...20,485,402
Ensembl chrNW_004624754:20,434,648...20,481,206
JBrowse link
G Mdga2 MAM domain containing glycosylphosphatidylinositol anchor 2 involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004624731:20,951,651...21,760,267
Ensembl chrNW_004624731:20,951,954...21,754,936
JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISO (PMID:30735130) MGI PMID:30735130 NCBI chrNW_004624743:8,072,871...8,235,174
Ensembl chrNW_004624743:8,072,673...8,235,252
JBrowse link
G Mycbp2 MYC binding protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624751:23,048,373...23,355,510
Ensembl chrNW_004624751:23,048,404...23,355,510
JBrowse link
G Myh10 myosin heavy chain 10 acts_upstream_of_or_within ISO (PMID:15880105) MGI PMID:15880105 NCBI chrNW_004624786:11,039,436...11,190,935
Ensembl chrNW_004624786:11,040,951...11,185,627
JBrowse link
G Myot myotilin involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624733:9,131,051...9,160,813
Ensembl chrNW_004624733:9,130,399...9,160,908
JBrowse link
G Ncam2 neural cell adhesion molecule 2 involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004624745:9,327,125...9,826,922
Ensembl chrNW_004624745:9,327,345...9,822,852
JBrowse link
G Nectin1 nectin cell adhesion molecule 1 ISO RGD PMID:15328010 RGD:1599806 NCBI chrNW_004624784:14,997,533...15,058,971
Ensembl chrNW_004624784:14,997,424...15,059,761
JBrowse link
G Neurog2 neurogenin 2 acts_upstream_of_or_within ISO (PMID:12895419), (PMID:15328020) MGI PMID:12895419 PMID:15328020 NCBI chrNW_004624838:6,324,036...6,325,511 JBrowse link
G Nfasc neurofascin acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:15479642) MGI
TreeGrafter
PMID:15479642 GO_REF:0000118 NCBI chrNW_004624807:6,097,507...6,260,880
Ensembl chrNW_004624807:6,103,524...6,226,583
JBrowse link
G Ngfr nerve growth factor receptor acts_upstream_of_or_within ISO (PMID:11978834) MGI PMID:11978834 NCBI chrNW_004624795:5,623,686...5,639,545
Ensembl chrNW_004624795:5,623,700...5,639,655
JBrowse link
G Nkx2-1 NK2 homeobox 1 acts_upstream_of_or_within ISO (PMID:11830575) MGI PMID:11830575 NCBI chrNW_004624838:300,902...304,944
Ensembl chrNW_004624838:300,458...305,517
JBrowse link
G Nog noggin acts_upstream_of_or_within ISO (PMID:12435358) MGI PMID:12435358 NCBI chrNW_004624795:11,696,102...11,697,367
Ensembl chrNW_004624795:11,696,353...11,697,051
JBrowse link
G Notch1 notch receptor 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624760:1,636,331...1,676,398
Ensembl chrNW_004624760:1,634,702...1,676,531
JBrowse link
G Notch2 notch receptor 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624772:15,572,350...15,726,312
Ensembl chrNW_004624772:15,571,998...15,726,426
JBrowse link
G Notch3 notch receptor 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624901:2,292,257...2,328,433
Ensembl chrNW_004624901:2,292,640...2,328,433
JBrowse link
G Notch4 notch receptor 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624754:24,108,661...24,128,053 JBrowse link
G Nptn neuroplastin involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624781:752,048...818,250
Ensembl chrNW_004624781:751,912...819,847
JBrowse link
G Nr4a3 nuclear receptor subfamily 4 group A member 3 acts_upstream_of_or_within ISO (PMID:15456880) MGI PMID:15456880 NCBI chrNW_004624825:1,098,915...1,141,373
Ensembl chrNW_004624825:1,097,432...1,141,446
JBrowse link
G Nrcam neuronal cell adhesion molecule involved_in ISO (PMID:12182881) UniProt PMID:12182881 NCBI chrNW_004624739:21,308,457...21,633,627 JBrowse link
G Nrp1 neuropilin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12852851)
(PMID:15814794)
(PMID:15604101), (PMID:15814794)
InterPro
TreeGrafter
MGI
PMID:12852851 PMID:15604101 PMID:15814794 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624805:8,438,485...8,574,845
Ensembl chrNW_004624805:8,438,498...8,574,508
JBrowse link
G Nrp2 neuropilin 2 involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:15814794) RGD
TreeGrafter
MGI
Ensembl
InterPro
PMID:9288754 PMID:15814794 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 RGD:633436 NCBI chrNW_004624765:10,372,172...10,484,766
Ensembl chrNW_004624765:10,372,099...10,484,963
JBrowse link
G Ntf3 neurotrophin 3 acts_upstream_of_or_within ISO (PMID:15550985)
(PMID:8861722)
MGI PMID:8861722 PMID:15550985 NCBI chrNW_004624860:2,416,448...2,479,216
Ensembl chrNW_004624860:2,416,503...2,479,225
JBrowse link
G Ntn1 netrin 1 acts_upstream_of_or_within ISO (PMID:10908620), (PMID:16481423), (PMID:17898206)
(PMID:12051827), (PMID:12679031), (PMID:17086203)
MGI PMID:10908620 PMID:12051827 PMID:12679031 PMID:16481423 PMID:17086203 More... NCBI chrNW_004624786:11,508,643...11,707,060
Ensembl chrNW_004624786:11,526,050...11,703,258
JBrowse link
G Ntn4 netrin 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624750:11,499,755...11,619,249
Ensembl chrNW_004624750:11,499,405...11,621,265
JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 ISO RGD PMID:18344912 RGD:5684394 NCBI chrNW_004624885:1,989,027...2,005,474
Ensembl chrNW_004624885:1,989,138...2,005,577
JBrowse link
G Otx2 orthodenticle homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624884:1,830,645...1,840,213 JBrowse link
G Pax6 paired box 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11967891), (PMID:14586016) Ensembl
MGI
PMID:11967891 PMID:14586016 GO_REF:0000107 NCBI chrNW_004624766:20,536,581...20,554,589
Ensembl chrNW_004624766:20,536,233...20,554,759
JBrowse link
G Pgrmc1 progesterone receptor membrane component 1 ISO RGD PMID:10656251 RGD:727289 NCBI chrNW_004624895:3,265,326...3,273,531
Ensembl chrNW_004624895:3,264,798...3,273,529
JBrowse link
G Pla2g10 phospholipase A2 group X acts_upstream_of_or_within ISO (PMID:15927955) MGI PMID:15927955 NCBI chrNW_004624782:3,871,034...3,887,476
Ensembl chrNW_004624782:3,870,940...3,887,426
JBrowse link
G Plxna3 plexin A3 acts_upstream_of_or_within ISO (PMID:11683995) MGI PMID:11683995 NCBI chrNW_004624946:924,956...939,483
Ensembl chrNW_004624946:926,521...939,483
JBrowse link
G Plxna4 plexin A4 acts_upstream_of_or_within ISO (PMID:15814794) MGI PMID:15814794 NCBI chrNW_004624783:3,831,320...4,292,594
Ensembl chrNW_004624783:3,658,835...4,285,638
JBrowse link
G Pou4f2 POU class 4 homeobox 2 acts_upstream_of_or_within ISO (PMID:11163266) MGI PMID:11163266 NCBI chrNW_004624853:5,446,575...5,448,704
Ensembl chrNW_004624853:5,446,694...5,448,637
JBrowse link
G Ptk7 protein tyrosine kinase 7 (inactive) involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004624754:16,386,437...16,441,341
Ensembl chrNW_004624754:16,386,296...16,440,681
JBrowse link
G Ptpro protein tyrosine phosphatase receptor type O involved_in ISS
IEA
UniProt
TreeGrafter
GO_REF:0000024 GO_REF:0000118 NCBI chrNW_004624752:22,446,203...22,700,925
Ensembl chrNW_004624752:22,445,311...22,700,904
JBrowse link
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within ISO (PMID:17409253) MGI PMID:17409253 NCBI chrNW_004624740:30,912,841...30,933,882
Ensembl chrNW_004624740:30,911,598...30,934,025
JBrowse link
G Reln reelin acts_upstream_of_or_within ISO (PMID:16324103) MGI PMID:16324103 NCBI chrNW_004624739:25,472,626...25,918,064
Ensembl chrNW_004624739:25,472,561...25,918,167
JBrowse link
G Robo1 roundabout guidance receptor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:15084255)
(PMID:15091338)
RGD
MGI
InterPro
PMID:9458045 PMID:15084255 PMID:15091338 GO_REF:0000002 RGD:61733 NCBI chrNW_004624874:4,234,640...5,359,333
Ensembl chrNW_004624874:4,949,538...5,357,690
JBrowse link
G Robo2 roundabout guidance receptor 2 acts_upstream_of_or_within ISO (PMID:15091338) RGD
MGI
PMID:10102268 PMID:15091338 RGD:68763 NCBI chrNW_004624745:800,963...2,121,445
Ensembl chrNW_004624745:804,797...1,390,551
JBrowse link
G Robo3 roundabout guidance receptor 3 acts_upstream_of_or_within
involved_in
ISO (PMID:15084255)
(PMID:25433640), (PMID:26586761)
(PMID:30843071)
(PMID:15084255), (PMID:15233918)
MGI
UniProt
PMID:15084255 PMID:15233918 PMID:25433640 PMID:26586761 PMID:30843071 NCBI chrNW_004624927:872,197...887,316
Ensembl chrNW_004624927:872,197...887,079
JBrowse link
G Runx3 RUNX family transcription factor 3 acts_upstream_of_or_within ISO (PMID:12352981) MGI PMID:12352981 NCBI chrNW_004624764:9,192,067...9,218,617
Ensembl chrNW_004624764:9,191,556...9,248,252
JBrowse link
G Ryk receptor like tyrosine kinase involved_in ISO (PMID:16116452)
(PMID:16723543)
UniProt PMID:16116452 PMID:16723543 NCBI chrNW_004624730:10,462,590...10,568,780 JBrowse link
G Scn1b sodium voltage-gated channel beta subunit 1 acts_upstream_of_or_within ISO (PMID:18354028) MGI PMID:18354028 NCBI chrNW_004624794:8,439,609...8,449,731
Ensembl chrNW_004624794:8,439,600...8,450,179
JBrowse link
G Sdk2 sidekick cell adhesion molecule 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624801:3,412,950...3,667,030
Ensembl chrNW_004624801:3,416,835...3,666,635
JBrowse link
G Sema3a semaphorin 3A acts_upstream_of_or_within
involved_in
ISO
IEA
PMID:21068336
(PMID:15604101)
(PMID:12435358), (PMID:15814794), (PMID:15869472)
(PMID:17417650), (PMID:17428830)
MGI
UniProt
PMID:12435358 PMID:15604101 PMID:15814794 PMID:15869472 PMID:17417650 More... GO_REF:0000117 RGD:8554551 NCBI chrNW_004624739:32,104,014...32,426,980
Ensembl chrNW_004624739:32,105,824...32,309,271
JBrowse link
G Sema3b semaphorin 3B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624730:4,131,329...4,142,126
Ensembl chrNW_004624730:4,131,057...4,142,374
JBrowse link
G Sema3c semaphorin 3C involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624739:29,484,557...29,642,981
Ensembl chrNW_004624739:29,484,461...29,626,619
JBrowse link
G Sema3d semaphorin 3D involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624739:32,981,158...33,143,250
Ensembl chrNW_004624739:32,981,101...33,086,376
JBrowse link
G Sema3e semaphorin 3E involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624739:31,606,128...31,851,624
Ensembl chrNW_004624739:31,608,501...31,716,640
JBrowse link
G Sema3f semaphorin 3F acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:15814794)
(PMID:12435358)
MGI
TreeGrafter
PMID:12435358 PMID:15814794 GO_REF:0000118 NCBI chrNW_004624730:4,035,909...4,064,796
Ensembl chrNW_004624730:4,035,874...4,065,667
JBrowse link
G Sema3g semaphorin 3G involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624822:4,773,479...4,784,578
Ensembl chrNW_004624822:4,773,276...4,784,850
JBrowse link
G Sema4a semaphorin 4A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624885:1,470,666...1,493,634
Ensembl chrNW_004624885:1,470,525...1,495,369
JBrowse link
G Sema4b semaphorin 4B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624768:17,170,732...17,208,601
Ensembl chrNW_004624768:17,185,161...17,207,666
JBrowse link
G Sema4c semaphorin 4C involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624749:2,737,251...2,747,540
Ensembl chrNW_004624749:2,737,251...2,745,979
JBrowse link
G Sema4d semaphorin 4D involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624765:23,097,771...23,244,778
Ensembl chrNW_004624765:23,197,462...23,229,922
JBrowse link
G Sema4f ssemaphorin 4F involved_in ISO
IEA
RGD
TreeGrafter
PMID:10051670 GO_REF:0000118 RGD:69991 NCBI chrNW_004624749:28,827,766...28,855,159
Ensembl chrNW_004624749:28,828,826...28,855,128
JBrowse link
G Sema4g semaphorin 4G involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624831:578,087...590,458
Ensembl chrNW_004624831:577,875...589,427
JBrowse link
G Sema5a semaphorin 5A acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:12506007) MGI
TreeGrafter
PMID:12506007 GO_REF:0000118 NCBI chrNW_004624751:6,429,814...6,913,673
Ensembl chrNW_004624751:6,436,854...6,738,216
JBrowse link
G Sema5b semaphorin 5B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624912:1,244,801...1,370,253
Ensembl chrNW_004624912:1,244,801...1,280,609
JBrowse link
G Sema6a semaphorin 6A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624733:5,249,245...5,371,841
Ensembl chrNW_004624733:5,249,235...5,374,117
JBrowse link
G Sema6b semaphorin 6B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624828:5,170,745...5,193,568
Ensembl chrNW_004624828:5,182,812...5,192,486
JBrowse link
G Sema6c semaphorin 6C involved_in ISO
IEA
RGD
TreeGrafter
PMID:10049528 GO_REF:0000118 RGD:69992 NCBI chrNW_004624772:18,707,723...18,720,661
Ensembl chrNW_004624772:18,707,744...18,720,731
JBrowse link
G Sema6d semaphorin 6D involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624731:11,914,530...12,269,463
Ensembl chrNW_004624731:11,914,422...11,970,138
JBrowse link
G Sema7a semaphorin 7A (JohnMiltonHagen blood group) involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624781:221,821...244,854
Ensembl chrNW_004624781:221,812...248,185
JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (PMID:12679031)
(PMID:12756179), (PMID:15065125)
MGI PMID:12679031 PMID:12756179 PMID:15065125 NCBI chrNW_004624800:2,202,986...2,215,309
Ensembl chrNW_004624800:2,203,393...2,212,068
JBrowse link
G Slit1 slit guidance ligand 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:11804571)
(PMID:15091338)
(PMID:12051827)
(PMID:12954717)
MGI
TreeGrafter
PMID:11804571 PMID:12051827 PMID:12954717 PMID:15091338 GO_REF:0000118 NCBI chrNW_004624737:8,458,444...8,632,316
Ensembl chrNW_004624737:8,460,508...8,632,302
JBrowse link
G Slit2 slit guidance ligand 2 involved_in
acts_upstream_of_or_within
ISO (PMID:11748139)
(PMID:12879062), (PMID:12954717)
(PMID:11804571)
(PMID:14605369)
(PMID:15091338)
UniProt
MGI
PMID:11748139 PMID:11804571 PMID:12879062 PMID:12954717 PMID:14605369 More... NCBI chrNW_004624755:11,470,810...11,819,800
Ensembl chrNW_004624755:11,472,377...11,819,266
JBrowse link
G Slit3 slit guidance ligand 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:12954717) MGI
TreeGrafter
PMID:12954717 GO_REF:0000118 NCBI chrNW_004624733:20,683,680...21,293,663
Ensembl chrNW_004624733:20,683,814...21,291,088
JBrowse link
G Smad4 SMAD family member 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21300867) Ensembl
MGI
PMID:21300867 GO_REF:0000107 NCBI chrNW_004624778:14,570,025...14,629,950
Ensembl chrNW_004624778:14,570,348...14,630,325
JBrowse link
G Tgfb2 transforming growth factor beta 2 acts_upstream_of_or_within ISO (PMID:15528466) MGI PMID:15528466 NCBI chrNW_004624835:2,363,059...2,436,536
Ensembl chrNW_004624835:2,363,139...2,437,643
JBrowse link
G Trio trio Rho guanine nucleotide exchange factor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624751:11,252,934...11,566,190
Ensembl chrNW_004624751:11,362,844...11,565,269
JBrowse link
G Ttc8 tetratricopeptide repeat domain 8 acts_upstream_of_or_within ISO (PMID:21646512) MGI PMID:21646512 NCBI chrNW_004624734:13,437,234...13,497,269
Ensembl chrNW_004624734:13,437,221...13,497,510
JBrowse link
G Tubb3 tubulin beta 3 class III involved_in ISO (PMID:20074521)
(PMID:20074521), (PMID:28483977)
UniProt PMID:20074521 PMID:28483977 NCBI chrNW_004624746:124,014...130,476 JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 acts_upstream_of_or_within ISO (PMID:29099309) MGI PMID:29099309 NCBI chrNW_004624747:27,680,994...27,697,342
Ensembl chrNW_004624747:27,681,033...27,695,966
JBrowse link
G Unc5a unc-5 netrin receptor A involved_in ISO
IEA
RGD
UniProt
PMID:9126742 GO_REF:0000117 RGD:634450 NCBI chrNW_004624733:13,262,271...13,322,649
Ensembl chrNW_004624733:13,262,271...13,322,673
JBrowse link
G Unc5b unc-5 netrin receptor B acts_upstream_of_or_within
involved_in
ISO
IEA
PMID:21673655 MGI
UniProt
RGD
PMID:9126742 PMID:21673655 GO_REF:0000117 RGD:634450 RGD:8554719 NCBI chrNW_004624754:5,204,875...5,280,479
Ensembl chrNW_004624754:5,204,855...5,282,170
JBrowse link
G Unc5c unc-5 netrin receptor C involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23144223) UniProt
TreeGrafter
MGI
PMID:23144223 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004624757:23,145,200...23,537,812
Ensembl chrNW_004624757:23,151,485...23,537,706
JBrowse link
G Unc5d unc-5 netrin receptor D involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21673655) UniProt
TreeGrafter
MGI
PMID:21673655 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004624780:7,949,944...8,495,431
Ensembl chrNW_004624780:7,951,155...8,495,332
JBrowse link
G Usp33 ubiquitin specific peptidase 33 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624742:19,450,217...19,506,169
Ensembl chrNW_004624742:19,450,246...19,501,341
JBrowse link
G Vasp vasodilator stimulated phosphoprotein acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:15371503) MGI
TreeGrafter
PMID:15371503 GO_REF:0000118 NCBI chrNW_004624832:7,619,211...7,631,576
Ensembl chrNW_004624832:7,619,134...7,630,943
JBrowse link
G Vax1 ventral anterior homeobox 1 acts_upstream_of_or_within ISO (PMID:10601035) MGI PMID:10601035 NCBI chrNW_004624737:29,489,601...29,496,548
Ensembl chrNW_004624737:29,490,936...29,496,483
JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO (PMID:18716223) MGI PMID:18716223 NCBI chrNW_004624937:816,752...845,866
Ensembl chrNW_004624937:816,759...845,458
JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO (PMID:21483795) UniProt PMID:21483795 NCBI chrNW_004624822:1,824,378...1,843,599
Ensembl chrNW_004624822:1,825,238...1,841,288
JBrowse link
axon midline choice point recognition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:8001115) Ensembl
MGI
PMID:8001115 GO_REF:0000107 NCBI chrNW_004624745:13,904,912...14,159,374
Ensembl chrNW_004624745:13,902,577...14,159,372
JBrowse link
G Diaph1 diaphanous related formin 1 acts_upstream_of_or_within ISO (PMID:23890216) MGI PMID:23890216 NCBI chrNW_004624774:738,717...845,187
Ensembl chrNW_004624774:739,206...845,272
JBrowse link
G Diaph2 diaphanous related formin 2 acts_upstream_of_or_within ISO (PMID:23890216) MGI PMID:23890216 NCBI chrNW_004624851:3,291,888...4,329,285 JBrowse link
G Foxg1 forkhead box G1 acts_upstream_of_or_within ISO (PMID:15240555) MGI PMID:15240555 NCBI chrNW_004624820:3,542,767...3,547,180
Ensembl chrNW_004624820:3,543,687...3,545,147
JBrowse link
G Robo1 roundabout guidance receptor 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624874:4,234,640...5,359,333
Ensembl chrNW_004624874:4,949,538...5,357,690
JBrowse link
G Robo2 roundabout guidance receptor 2 involved_in ISO (PMID:18986510) UniProt PMID:18986510 NCBI chrNW_004624745:800,963...2,121,445
Ensembl chrNW_004624745:804,797...1,390,551
JBrowse link
G Robo3 roundabout guidance receptor 3 involved_in ISO (PMID:18986510) UniProt PMID:18986510 NCBI chrNW_004624927:872,197...887,316
Ensembl chrNW_004624927:872,197...887,079
JBrowse link
axon regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa1 apolipoprotein A1 NOT|acts_upstream_of_or_within ISO (PMID:7798939) MGI PMID:7798939 NCBI chrNW_004624784:12,249,283...12,251,215
Ensembl chrNW_004624784:12,249,283...12,251,136
JBrowse link
G Apoe apolipoprotein E NOT|acts_upstream_of_or_within ISO (PMID:7798939) MGI PMID:7798939 NCBI chrNW_004624907:1,752,322...1,755,308 JBrowse link
G Bcl2 BCL2 apoptosis regulator acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:9009190) MGI
Ensembl
PMID:9009190 GO_REF:0000107 NCBI chrNW_004624792:8,854,345...9,032,727
Ensembl chrNW_004624792:8,859,522...9,031,344
JBrowse link
G Chl1 cell adhesion molecule L1 like ISO RGD PMID:14707551 RGD:1303346 NCBI chrNW_004624773:10,142,515...10,342,280
Ensembl chrNW_004624773:10,262,714...10,342,392
JBrowse link
G Cntf ciliary neurotrophic factor involved_in ISO PMID:16699509 UniProt PMID:16699509 RGD:12793002 NCBI chrNW_004624864:1,785,215...1,788,608
Ensembl chrNW_004624864:1,782,139...1,792,879
JBrowse link
G Cspg5 chondroitin sulfate proteoglycan 5 ISO RGD PMID:11069908 RGD:1298825 NCBI chrNW_004624730:73,860,578...73,871,515
Ensembl chrNW_004624730:73,861,847...73,873,521
JBrowse link
G Ctnna1 catenin alpha 1 ISO RGD PMID:12387456 RGD:632464 NCBI chrNW_004624743:31,512,481...31,700,340 JBrowse link
G Dag1 dystroglycan 1 ISO RGD PMID:16228655 RGD:11537480 NCBI chrNW_004624730:3,417,356...3,488,300
Ensembl chrNW_004624730:3,417,347...3,488,879
JBrowse link
G Dhfr dihydrofolate reductase involved_in ISO PMID:20424322 BHF-UCL PMID:20424322 RGD:10054082 NCBI chrNW_004624743:1,446,643...1,462,319
Ensembl chrNW_004624743:1,446,643...1,461,863
JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:21935678) MGI PMID:21935678 NCBI chrNW_004624753:5,918,005...5,983,480
Ensembl chrNW_004624753:5,917,689...5,982,308
JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 ISO RGD PMID:23437108 RGD:405650403 NCBI chrNW_004624795:3,373,313...3,391,509
Ensembl chrNW_004624795:3,373,000...3,391,602
JBrowse link
G Folr1 folate receptor alpha involved_in ISO (PMID:20424322) BHF-UCL PMID:20424322 NCBI chrNW_004624817:4,830,164...4,850,565
Ensembl chrNW_004624817:4,820,163...4,851,339
JBrowse link
G Gap43 growth associated protein 43 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624731:32,629,586...32,748,515
Ensembl chrNW_004624731:32,629,477...32,749,081
JBrowse link
G Isl1 ISL LIM homeobox 1 ISO RGD PMID:10363827 RGD:2311122 NCBI chrNW_004624759:7,996,177...8,006,281
Ensembl chrNW_004624759:7,994,242...8,006,311
JBrowse link
G Jak2 Janus kinase 2 ISO RGD PMID:15716400 RGD:1641846 NCBI chrNW_004624736:9,724,876...9,827,364
Ensembl chrNW_004624736:9,724,369...9,830,365
JBrowse link
G Jam3 junctional adhesion molecule 3 ISO RGD PMID:22950044 RGD:7488944 NCBI chrNW_004624812:8,644,002...8,707,257
Ensembl chrNW_004624812:8,643,921...8,707,351
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit acts_upstream_of_or_within ISO (PMID:15233917) MGI PMID:15233917 NCBI chrNW_004624862:1,537,886...1,540,633
Ensembl chrNW_004624862:1,538,455...1,539,426
JBrowse link
G Mag myelin associated glycoprotein acts_upstream_of_or_within ISO (PMID:20731761) MGI PMID:20731761 NCBI chrNW_004624794:8,237,005...8,251,933
Ensembl chrNW_004624794:8,236,223...8,258,361
JBrowse link
G Mapk8ip3 mitogen-activated protein kinase 8 interacting protein 3 involved_in ISO PMID:25944905 UniProt PMID:25944905 RGD:13673780 NCBI chrNW_004624913:481,236...529,083
Ensembl chrNW_004624913:481,207...529,070
JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase involved_in ISO PMID:20424322 BHF-UCL PMID:20424322 RGD:10054082 NCBI chrNW_004624775:13,791,690...13,903,888
Ensembl chrNW_004624775:13,792,043...13,896,559
JBrowse link
G Nefh neurofilament heavy chain ISO RGD PMID:10646539 RGD:9698439 NCBI chrNW_004624747:5,806,576...5,816,158
Ensembl chrNW_004624747:5,806,645...5,815,554
JBrowse link
G Nefm neurofilament medium chain ISO RGD PMID:15206821 RGD:9698447 NCBI chrNW_004624758:20,030,450...20,036,105 JBrowse link
G Nrep neuronal regeneration related protein involved_in ISO
IEA
RGD
TreeGrafter
PMID:15485502 GO_REF:0000118 RGD:1540387 NCBI chrNW_004624743:29,529,356...29,557,620
Ensembl chrNW_004624743:29,529,356...29,557,414
JBrowse link
G Rxra retinoid X receptor alpha ISO RGD PMID:16782282 RGD:1643108 NCBI chrNW_004624760:2,379,809...2,455,749
Ensembl chrNW_004624760:2,380,708...2,456,928
JBrowse link
G Vcan versican ISO RGD PMID:12526031 RGD:632591 NCBI chrNW_004624743:3,635,086...3,743,332 JBrowse link
axon target recognition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdnf brain derived neurotrophic factor acts_upstream_of_or_within ISO (PMID:15464571) MGI PMID:15464571 NCBI chrNW_004624766:17,281,882...17,330,601
Ensembl chrNW_004624766:17,279,630...17,330,490
JBrowse link
G Foxb1 forkhead box B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624781:12,182,728...12,185,228
Ensembl chrNW_004624781:12,183,444...12,185,185
JBrowse link
G Stxbp1 syntaxin binding protein 1 acts_upstream_of_or_within ISO (PMID:15182301) MGI PMID:15182301 NCBI chrNW_004624760:7,843,741...7,914,444
Ensembl chrNW_004624760:7,842,640...7,914,484
JBrowse link
G Uchl1 ubiquitin C-terminal hydrolase L1 acts_upstream_of_or_within ISO (PMID:8474599) MGI PMID:8474599 NCBI chrNW_004624761:25,786,028...25,797,641
Ensembl chrNW_004624761:25,784,257...25,797,549
JBrowse link
axonal fasciculation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amigo1 adhesion molecule with Ig like domain 1 involved_in ISO PMID:12629050 UniProt PMID:12629050 RGD:634626 NCBI chrNW_004624772:5,231,266...5,236,703
Ensembl chrNW_004624772:5,231,266...5,236,496
JBrowse link
G Arhgap35 Rho GTPase activating protein 35 involved_in ISO (PMID:11283609) UniProt PMID:11283609 NCBI chrNW_004624832:6,650,383...6,773,828
Ensembl chrNW_004624832:6,650,383...6,719,786
JBrowse link
G Casp6 caspase 6 ISO RGD PMID:25898930 RGD:13781947 NCBI chrNW_004624830:170,392...179,883
Ensembl chrNW_004624830:171,427...184,814
JBrowse link
G Cdk5r1 cyclin dependent kinase 5 regulatory subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624875:538,752...542,874
Ensembl chrNW_004624875:538,790...543,044
JBrowse link
G Celsr3 cadherin EGF LAG seven-pass G-type receptor 3 acts_upstream_of_or_within ISO (PMID:15778712) MGI PMID:15778712 NCBI chrNW_004624730:2,650,096...2,675,930
Ensembl chrNW_004624730:2,651,756...2,675,923
JBrowse link
G Cnr1 cannabinoid receptor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:20962221) MGI
Ensembl
PMID:20962221 GO_REF:0000107 NCBI chrNW_004624799:6,100,709...6,126,530
Ensembl chrNW_004624799:6,101,728...6,126,520
JBrowse link
G Cntn2 contactin 2 acts_upstream_of_or_within ISO (PMID:18650339) MGI PMID:18650339 NCBI chrNW_004624807:6,052,591...6,080,421
Ensembl chrNW_004624807:6,056,339...6,073,588
JBrowse link
G Crtac1 cartilage acidic protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:21817055) MGI
TreeGrafter
PMID:21817055 GO_REF:0000118 NCBI chrNW_004624737:9,498,107...9,653,496
Ensembl chrNW_004624737:9,497,385...9,653,295
JBrowse link
G Ephb2 EPH receptor B2 involved_in ISO (PMID:8947026) UniProt PMID:8947026 NCBI chrNW_004624764:7,421,818...7,599,800
Ensembl chrNW_004624764:7,421,862...7,593,482
JBrowse link
G Ephb3 EPH receptor B3 involved_in ISO (PMID:8947026) UniProt PMID:8947026 NCBI chrNW_004624730:71,964,337...71,983,021
Ensembl chrNW_004624730:71,965,108...71,982,593
JBrowse link
G Fezf2 FEZ family zinc finger 2 acts_upstream_of_or_within ISO (PMID:16284245) MGI PMID:16284245 NCBI chrNW_004624888:3,462,132...3,467,701
Ensembl chrNW_004624888:3,462,233...3,468,293
JBrowse link
G L1cam L1 cell adhesion molecule ISO RGD PMID:3856258 RGD:11570517 NCBI chrNW_004624946:512,413...533,669
Ensembl chrNW_004624946:513,297...525,009
JBrowse link
G Ncam1 neural cell adhesion molecule 1 ISO RGD PMID:3856258 RGD:11570517 NCBI chrNW_004624784:8,339,582...8,635,025
Ensembl chrNW_004624784:8,339,916...8,636,012
JBrowse link
G Ncam2 neural cell adhesion molecule 2 ISO RGD PMID:15174086 RGD:1303997 NCBI chrNW_004624745:9,327,125...9,826,922
Ensembl chrNW_004624745:9,327,345...9,822,852
JBrowse link
G Ndn necdin, MAGE family member involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15972963) Ensembl
MGI
PMID:15972963 GO_REF:0000107 NCBI chrNW_004624768:579,607...581,302 JBrowse link
G Nrp1 neuropilin 1 acts_upstream_of_or_within ISO (PMID:17428830) MGI PMID:17428830 NCBI chrNW_004624805:8,438,485...8,574,845
Ensembl chrNW_004624805:8,438,498...8,574,508
JBrowse link
G Ptprz1 protein tyrosine phosphatase receptor type Z1 ISO RGD PMID:16150606 RGD:9590115 NCBI chrNW_004624783:13,911,525...14,105,403
Ensembl chrNW_004624783:13,912,332...14,105,292
JBrowse link
G Rtn4 reticulon 4 involved_in ISO PMID:20573699
(PMID:20573699)
UniProt PMID:20573699 RGD:8554113 NCBI chrNW_004624833:6,514,409...6,584,061 JBrowse link
G Sema3a semaphorin 3A acts_upstream_of_or_within ISO (PMID:17428830) MGI PMID:17428830 NCBI chrNW_004624739:32,104,014...32,426,980
Ensembl chrNW_004624739:32,105,824...32,309,271
JBrowse link
G Sema5a semaphorin 5A involved_in ISO PMID:15603739 UniProt PMID:15603739 RGD:8553809 NCBI chrNW_004624751:6,429,814...6,913,673
Ensembl chrNW_004624751:6,436,854...6,738,216
JBrowse link
G Tnfrsf21 TNF receptor superfamily member 21 ISO RGD PMID:25898930 RGD:13781947 NCBI chrNW_004624754:13,567,898...13,633,368
Ensembl chrNW_004624754:13,567,734...13,634,009
JBrowse link
axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actb actin beta ISO RGD PMID:12504890 RGD:728124 NCBI chrNW_004624740:28,087,051...28,090,359
Ensembl chrNW_004624740:28,087,736...28,090,512
JBrowse link
G Adcy1 adenylate cyclase 1 acts_upstream_of_or_within ISO (PMID:17229090) MGI PMID:17229090 NCBI chrNW_004624740:6,915,445...7,003,299
Ensembl chrNW_004624740:6,922,879...7,003,658
JBrowse link
G Afg3l2 AFG3 like matrix AAA peptidase subunit 2 involved_in
acts_upstream_of_or_within
ISO (PMID:27642048)
(PMID:2917690)
UniProt
MGI
PMID:2917690 PMID:27642048 NCBI chrNW_004624770:19,590,829...19,631,663
Ensembl chrNW_004624770:19,591,215...19,631,722
JBrowse link
G Als2 alsin Rho guanine nucleotide exchange factor ALS2 ISO RGD PMID:16802292 RGD:1599082 NCBI chrNW_004624899:74,080...170,565 JBrowse link
G Amigo1 adhesion molecule with Ig like domain 1 ISO RGD PMID:12629050 RGD:634626 NCBI chrNW_004624772:5,231,266...5,236,703
Ensembl chrNW_004624772:5,231,266...5,236,496
JBrowse link
G Ank3 ankyrin 3 involved_in ISO (PMID:11724816) BHF-UCL PMID:11724816 NCBI chrNW_004624791:3,299,287...3,633,631 JBrowse link
G Apc APC regulator of WNT signaling pathway acts_upstream_of_or_within ISO (PMID:15207235), (PMID:18716223)
(PMID:18716223)
MGI PMID:15207235 PMID:18716223 NCBI chrNW_004624743:30,517,034...30,635,740
Ensembl chrNW_004624743:30,546,323...30,635,737
JBrowse link
G Aplp1 amyloid beta precursor like protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624794:10,148,575...10,158,101
Ensembl chrNW_004624794:10,148,522...10,167,543
JBrowse link
G Aplp2 amyloid beta precursor like protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624812:4,490,798...4,571,500
Ensembl chrNW_004624812:4,490,798...4,571,623
JBrowse link
G App amyloid beta precursor protein involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9390996) Ensembl
TreeGrafter
MGI
PMID:9390996 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624745:13,904,912...14,159,374
Ensembl chrNW_004624745:13,902,577...14,159,372
JBrowse link
G Ark2c arkadia (RNF111) C-terminal like ring finger ubiquitin ligase 2C acts_upstream_of_or_within ISO (PMID:23610558) MGI PMID:23610558 NCBI chrNW_004624778:9,982,923...10,089,204
Ensembl chrNW_004624778:9,982,936...10,086,937
JBrowse link
G Atl1 atlastin GTPase 1 involved_in ISO PMID:16537571 UniProt PMID:16537571 RGD:8553504 NCBI chrNW_004624731:18,283,372...18,362,644
Ensembl chrNW_004624731:18,283,234...18,362,693
JBrowse link
G Bcl11b BCL11 transcription factor B acts_upstream_of_or_within ISO (PMID:15664173) MGI PMID:15664173 NCBI chrNW_004624734:4,560,362...4,649,219
Ensembl chrNW_004624734:4,560,699...4,647,858
JBrowse link
G Bcl2 BCL2 apoptosis regulator acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:9009190) MGI
Ensembl
PMID:9009190 GO_REF:0000107 NCBI chrNW_004624792:8,854,345...9,032,727
Ensembl chrNW_004624792:8,859,522...9,031,344
JBrowse link
G Brsk1 BR serine/threonine kinase 1 involved_in ISO (PMID:17482548) UniProt PMID:17482548 NCBI chrNW_004624832:1,975,448...1,995,102
Ensembl chrNW_004624832:1,975,314...1,995,056
JBrowse link
G Brsk2 BR serine/threonine kinase 2 involved_in ISO (PMID:17482548) UniProt PMID:17482548 NCBI chrNW_004624766:21,296,115...21,334,054
Ensembl chrNW_004624766:21,296,120...21,334,040
JBrowse link
G Cacna1f calcium voltage-gated channel subunit alpha1 F acts_upstream_of_or_within ISO (PMID:16155113) MGI PMID:16155113 NCBI chrNW_004624893:945,378...968,041
Ensembl chrNW_004624893:945,436...970,431
JBrowse link
G Cck cholecystokinin acts_upstream_of_or_within ISO (PMID:15152034) MGI PMID:15152034 NCBI chrNW_004624730:77,310,080...77,314,258
Ensembl chrNW_004624730:77,309,633...77,314,384
JBrowse link
G Cckar cholecystokinin A receptor acts_upstream_of_or_within ISO (PMID:15152034) MGI PMID:15152034 NCBI chrNW_004624755:6,122,181...6,132,623
Ensembl chrNW_004624755:6,121,620...6,132,897
JBrowse link
G Cdk5 cyclin dependent kinase 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11163260) Ensembl
TreeGrafter
MGI
PMID:11163260 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624800:5,562,468...5,566,458
Ensembl chrNW_004624800:5,562,462...5,569,937
JBrowse link
G Cnp 2',3'-cyclic nucleotide 3' phosphodiesterase acts_upstream_of_or_within ISO (PMID:12590258) MGI PMID:12590258 NCBI chrNW_004624795:1,856,455...1,861,142
Ensembl chrNW_004624795:1,855,992...1,861,053
JBrowse link
G Cntn2 contactin 2 ISO RGD PMID:2317872 RGD:727707 NCBI chrNW_004624807:6,052,591...6,080,421
Ensembl chrNW_004624807:6,056,339...6,073,588
JBrowse link
G Cntnap1 contactin associated protein 1 involved_in ISO (PMID:28370195) MGI PMID:28370195 NCBI chrNW_004624795:1,470,234...1,482,066
Ensembl chrNW_004624795:1,470,760...1,481,973
JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (PMID:28370195) MGI PMID:28370195 NCBI chrNW_004624800:7,182,588...9,280,407
Ensembl chrNW_004624800:7,181,020...9,279,678
JBrowse link
G Creb1 cAMP responsive element binding protein 1 acts_upstream_of_or_within ISO (PMID:11988169) MGI PMID:11988169 NCBI chrNW_004624765:8,374,160...8,436,969 JBrowse link
G Ctnna2 catenin alpha 2 involved_in ISO (PMID:16691566) UniProt PMID:16691566 NCBI chrNW_004624749:22,332,750...23,546,165
Ensembl chrNW_004624749:22,333,710...23,412,593
JBrowse link
G Dab1 DAB adaptor protein 1 acts_upstream_of ISO (PMID:21111240) MGI PMID:21111240 NCBI chrNW_004624862:2,053,637...3,159,712
Ensembl chrNW_004624862:2,892,851...3,144,194
JBrowse link
G Dclk1 doublecortin like kinase 1 acts_upstream_of_or_within ISO (PMID:16387639) MGI PMID:16387639 NCBI chrNW_004624776:1,299,691...1,679,888
Ensembl chrNW_004624776:1,301,762...1,676,835
JBrowse link
G Dlx5 distal-less homeobox 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12533617) Ensembl
MGI
PMID:12533617 GO_REF:0000107 NCBI chrNW_004624813:3,760,890...3,765,309
Ensembl chrNW_004624813:3,760,661...3,765,517
JBrowse link
G Dock7 dedicator of cytokinesis 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624742:31,189,890...31,390,284
Ensembl chrNW_004624742:31,189,852...31,390,478
JBrowse link
G Drd2 dopamine receptor D2 acts_upstream_of_or_within ISO (PMID:11438590) MGI PMID:11438590 NCBI chrNW_004624784:8,828,589...8,906,617
Ensembl chrNW_004624784:8,827,006...8,865,529
JBrowse link
G Drgx dorsal root ganglia homeobox acts_upstream_of_or_within ISO (PMID:11498051) MGI PMID:11498051 NCBI chrNW_004624928:566,405...592,561
Ensembl chrNW_004624928:566,793...592,507
JBrowse link
G Dst dystonin acts_upstream_of_or_within ISO (PMID:1634998) MGI PMID:1634998 NCBI chrNW_004624753:18,321,591...18,778,090
Ensembl chrNW_004624753:18,321,591...18,674,329
JBrowse link
G Dvl1 dishevelled segment polarity protein 1 acts_upstream_of_or_within ISO (PMID:14734535) MGI PMID:14734535 NCBI chrNW_004624818:8,267,111...8,283,755
Ensembl chrNW_004624818:8,267,128...8,278,725
JBrowse link
G Ephb2 EPH receptor B2 acts_upstream_of ISO (PMID:12971893) MGI PMID:12971893 NCBI chrNW_004624764:7,421,818...7,599,800
Ensembl chrNW_004624764:7,421,862...7,593,482
JBrowse link
G Erbb3 erb-b2 receptor tyrosine kinase 3 ISO RGD PMID:9030624 RGD:68774 NCBI chrNW_004624802:11,906,279...11,925,530
Ensembl chrNW_004624802:11,905,271...11,925,707
JBrowse link
G Fam168b family with sequence similarity 168 member B acts_upstream_of_or_within ISO (PMID:20716133) MGI PMID:20716133 NCBI chrNW_004624732:15,110,730...15,149,464
Ensembl chrNW_004624732:15,110,730...15,149,866
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO (PMID:17951031) MGI PMID:17951031 NCBI chrNW_004624737:25,052,698...25,158,346
Ensembl chrNW_004624737:25,052,606...25,158,529
JBrowse link
G Flot1 flotillin 1 acts_upstream_of_or_within ISO (PMID:19458231) MGI PMID:19458231 NCBI chrNW_004624754:24,992,961...25,000,463
Ensembl chrNW_004624754:24,992,929...25,003,759
JBrowse link
G Golga2 golgin A2 acts_upstream_of ISO (PMID:21111240) MGI PMID:21111240 NCBI chrNW_004624760:6,588,351...6,605,518 JBrowse link
G Gsk3b glycogen synthase kinase 3 beta acts_upstream_of_or_within ISO (PMID:18716223) MGI PMID:18716223 NCBI chrNW_004624731:28,178,647...28,368,784
Ensembl chrNW_004624731:28,178,628...28,366,420
JBrowse link
G Igf1r insulin like growth factor 1 receptor ISO RGD PMID:16845384 RGD:1624300 NCBI chrNW_004624768:5,396,027...5,688,435
Ensembl chrNW_004624768:5,396,156...5,681,809
JBrowse link
G Isl1 ISL LIM homeobox 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624759:7,996,177...8,006,281
Ensembl chrNW_004624759:7,994,242...8,006,311
JBrowse link
G Isl2 ISL LIM homeobox 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624894:1,852,337...1,855,827
Ensembl chrNW_004624894:1,852,114...1,855,761
JBrowse link
G Kalrn kalirin RhoGEF kinase ISO RGD PMID:12177196 RGD:628431 NCBI chrNW_004624731:54,934...756,707
Ensembl chrNW_004624731:121,122...752,942
JBrowse link
G Klf7 KLF transcription factor 7 acts_upstream_of_or_within ISO (PMID:15964824) MGI PMID:15964824 NCBI chrNW_004624765:8,823,319...8,914,016
Ensembl chrNW_004624765:8,823,251...8,910,068
JBrowse link
G Llgl1 LLGL scribble cell polarity complex component 1 involved_in ISO PMID:21856246 UniProt PMID:21856246 RGD:8553614 NCBI chrNW_004624849:3,227,518...3,245,137
Ensembl chrNW_004624849:3,227,758...3,245,118
JBrowse link
G LOC101706874 survival motor neuron protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624905:485,320...508,058 JBrowse link
G LOC101720937 amyloid-like protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624794:10,158,833...10,167,427 JBrowse link
G Lrrc26 leucine rich repeat containing 26 involved_in IEA TreeGrafter
UniProt
GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004624760:774,137...777,095 JBrowse link
G Lrtm1 leucine rich repeats and transmembrane domains 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624822:2,343,968...2,354,038
Ensembl chrNW_004624822:2,343,967...2,354,525
JBrowse link
G Lrtm2 leucine rich repeats and transmembrane domains 2 involved_in IEA TreeGrafter
UniProt
GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004624735:11,056,080...11,073,939
Ensembl chrNW_004624735:11,055,971...11,066,338
JBrowse link
G Map1a microtubule associated protein 1A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624804:10,611,657...10,632,199
Ensembl chrNW_004624804:10,611,672...10,630,881
JBrowse link
G Map1b microtubule associated protein 1B acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:11891784) MGI
TreeGrafter
PMID:11891784 GO_REF:0000118 NCBI chrNW_004624905:1,198,157...1,304,128
Ensembl chrNW_004624905:1,198,205...1,304,309
JBrowse link
G Map1s microtubule associated protein 1S involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624908:400,765...408,154
Ensembl chrNW_004624908:400,577...408,129
JBrowse link
G Map2 microtubule associated protein 2 acts_upstream_of_or_within ISO (PMID:11891784)
(PMID:11891784), (PMID:20600662)
MGI PMID:11891784 PMID:20600662 NCBI chrNW_004624765:6,476,544...6,758,959
Ensembl chrNW_004624765:6,476,346...6,546,116
JBrowse link
G Mapt microtubule associated protein tau acts_upstream_of_or_within ISO (PMID:11891784) MGI PMID:11891784 NCBI chrNW_004624849:2,320,887...2,421,099 JBrowse link
G Metrn meteorin, glial cell differentiation regulator acts_upstream_of ISO (PMID:15085178) MGI PMID:15085178 NCBI chrNW_004624913:1,524,641...1,526,850
Ensembl chrNW_004624913:1,524,721...1,526,984
JBrowse link
G Myh10 myosin heavy chain 10 acts_upstream_of_or_within ISO (PMID:11283949) MGI PMID:11283949 NCBI chrNW_004624786:11,039,436...11,190,935
Ensembl chrNW_004624786:11,040,951...11,185,627
JBrowse link
G Ndn necdin, MAGE family member involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15649943), (PMID:15972963) Ensembl
MGI
PMID:15649943 PMID:15972963 GO_REF:0000107 NCBI chrNW_004624768:579,607...581,302 JBrowse link
G Nefl neurofilament light chain acts_upstream_of ISO (PMID:7946341) MGI PMID:7946341 NCBI chrNW_004624758:20,063,109...20,068,459
Ensembl chrNW_004624758:20,062,685...20,068,609
JBrowse link
G Nkx2-8 NK2 homeobox 8 acts_upstream_of_or_within ISO (PMID:16267219) MGI PMID:16267219 NCBI chrNW_004624838:227,941...234,431
Ensembl chrNW_004624838:228,153...229,728
JBrowse link
G Nolc1 nucleolar and coiled-body phosphoprotein 1 acts_upstream_of_or_within ISO (PMID:24794856) MGI PMID:24794856 NCBI chrNW_004624831:1,613,318...1,620,592
Ensembl chrNW_004624831:1,613,234...1,620,792
JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO (PMID:15598981)
(PMID:16120638)
MGI PMID:15598981 PMID:16120638 NCBI chrNW_004624760:1,636,331...1,676,398
Ensembl chrNW_004624760:1,634,702...1,676,531
JBrowse link
G Npr2 natriuretic peptide receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624868:4,974,690...4,993,886
Ensembl chrNW_004624868:4,974,810...4,993,817
JBrowse link
G Ntn1 netrin 1 acts_upstream_of_or_within ISO (PMID:10908620) MGI PMID:10908620 NCBI chrNW_004624786:11,508,643...11,707,060
Ensembl chrNW_004624786:11,526,050...11,703,258
JBrowse link
G Ntng1 netrin G1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:11804778) MGI
TreeGrafter
PMID:11804778 GO_REF:0000118 NCBI chrNW_004624772:3,164,503...3,493,574
Ensembl chrNW_004624772:3,165,679...3,491,832
JBrowse link
G Ntng2 netrin G2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:11804778) MGI
TreeGrafter
PMID:11804778 GO_REF:0000118 NCBI chrNW_004624760:4,016,441...4,067,325
Ensembl chrNW_004624760:4,016,441...4,067,126
JBrowse link
G Numb NUMB endocytic adaptor protein acts_upstream_of_or_within ISO (PMID:15598981) MGI PMID:15598981 NCBI chrNW_004624734:27,994,662...28,144,719 JBrowse link
G Numbl NUMB like endocytic adaptor protein acts_upstream_of_or_within ISO (PMID:15598981) MGI PMID:15598981 NCBI chrNW_004624925:595,679...623,479
Ensembl chrNW_004624925:596,448...622,641
JBrowse link
G Pak3 p21 (RAC1) activated kinase 3 involved_in ISO (PMID:21115725) UniProt PMID:21115725 NCBI chrNW_004624803:4,386,035...4,700,450
Ensembl chrNW_004624803:4,392,511...4,513,101
JBrowse link
G Pax6 paired box 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15514979) Ensembl
MGI
PMID:15514979 GO_REF:0000107 NCBI chrNW_004624766:20,536,581...20,554,589
Ensembl chrNW_004624766:20,536,233...20,554,759
JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein involved_in ISO PMID:18842885
(PMID:18842885)
BHF-UCL PMID:18842885 RGD:8554167 NCBI chrNW_004624845:3,875,601...3,990,347
Ensembl chrNW_004624845:3,891,061...3,990,342
JBrowse link
G Pip5k1c phosphatidylinositol-4-phosphate 5-kinase type 1 gamma acts_upstream_of_or_within ISO (PMID:14741049) MGI PMID:14741049 NCBI chrNW_004624828:6,324,156...6,369,394 JBrowse link
G Pitpna phosphatidylinositol transfer protein alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624786:4,238,500...4,274,890
Ensembl chrNW_004624786:4,242,046...4,274,625
JBrowse link
G Plppr4 phospholipid phosphatase related 4 involved_in ISO
IEA
RGD
TreeGrafter
PMID:12730698 GO_REF:0000118 RGD:1299556 NCBI chrNW_004624857:1,761,972...1,955,112
Ensembl chrNW_004624857:1,907,932...1,956,093
JBrowse link
G Pou4f2 POU class 4 homeobox 2 acts_upstream_of_or_within ISO (PMID:10357904) MGI PMID:10357904 NCBI chrNW_004624853:5,446,575...5,448,704
Ensembl chrNW_004624853:5,446,694...5,448,637
JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624816:10,087,866...10,185,004
Ensembl chrNW_004624816:10,164,666...10,184,994
JBrowse link
G Ptk2 protein tyrosine kinase 2 acts_upstream_of ISO (PMID:15378065) MGI PMID:15378065 NCBI chrNW_004624735:15,356,911...15,713,219
Ensembl chrNW_004624735:15,461,178...15,714,071
JBrowse link
G Ptpn11 protein tyrosine phosphatase non-receptor type 11 acts_upstream_of_or_within ISO (PMID:12482708) MGI PMID:12482708 NCBI chrNW_004624747:19,721,581...19,813,639
Ensembl chrNW_004624747:19,721,468...19,813,670
JBrowse link
G Ptprz1 protein tyrosine phosphatase receptor type Z1 acts_upstream_of_or_within ISO (PMID:10234020) MGI PMID:10234020 NCBI chrNW_004624783:13,911,525...14,105,403
Ensembl chrNW_004624783:13,912,332...14,105,292
JBrowse link
G Rab10 RAB10, member RAS oncogene family involved_in ISO PMID:21856246 UniProt PMID:21856246 RGD:8553614 NCBI chrNW_004624738:8,212,401...8,294,307
Ensembl chrNW_004624738:8,212,355...8,294,423
JBrowse link
G Rab3a RAB3A, member RAS oncogene family acts_upstream_of_or_within ISO (PMID:11359932) MGI PMID:11359932 NCBI chrNW_004624908:1,532,857...1,537,159
Ensembl chrNW_004624908:1,530,312...1,536,129
JBrowse link
G Rab8a RAB8A, member RAS oncogene family involved_in ISO PMID:21856246 UniProt PMID:21856246 RGD:8553614 NCBI chrNW_004624908:1,119,356...1,132,029
Ensembl chrNW_004624908:1,116,610...1,132,111
JBrowse link
G Rtn4r reticulon 4 receptor acts_upstream_of_or_within ISO (PMID:11201742) MGI PMID:11201742 NCBI chrNW_004624747:829,947...855,942
Ensembl chrNW_004624747:829,850...855,991
JBrowse link
G Ryk receptor like tyrosine kinase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:15454084) MGI
TreeGrafter
PMID:15454084 GO_REF:0000118 NCBI chrNW_004624730:10,462,590...10,568,780 JBrowse link
G Scn11a sodium voltage-gated channel alpha subunit 11 involved_in ISO (PMID:22641814) MGI PMID:22641814 NCBI chrNW_004624731:2,065,228...2,203,215 JBrowse link
G Sema4a semaphorin 4A involved_in ISO (PMID:20043131) UniProt PMID:20043131 NCBI chrNW_004624885:1,470,666...1,493,634
Ensembl chrNW_004624885:1,470,525...1,495,369
JBrowse link
G Sema4d semaphorin 4D acts_upstream_of ISO (PMID:15330859) MGI PMID:15330859 NCBI chrNW_004624765:23,097,771...23,244,778
Ensembl chrNW_004624765:23,197,462...23,229,922
JBrowse link
G Shtn1 shootin 1 involved_in
acts_upstream_of_or_within
ISO PMID:17439943
PMID:17030985
HGNC-UCL
MGI
PMID:17030985 PMID:17439943 RGD:8554246 RGD:8554472 NCBI chrNW_004624737:29,621,459...29,719,286 JBrowse link
G Slit1 slit guidance ligand 1 acts_upstream_of_or_within ISO (PMID:12097499) MGI PMID:12097499 NCBI chrNW_004624737:8,458,444...8,632,316
Ensembl chrNW_004624737:8,460,508...8,632,302
JBrowse link
G Slit2 slit guidance ligand 2 acts_upstream_of_or_within ISO (PMID:12097499) MGI PMID:12097499 NCBI chrNW_004624755:11,470,810...11,819,800
Ensembl chrNW_004624755:11,472,377...11,819,266
JBrowse link
G Slitrk1 SLIT and NTRK like family member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14550773) Ensembl
TreeGrafter
MGI
UniProt
PMID:14550773 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004624751:16,635,950...16,638,771
Ensembl chrNW_004624751:16,636,183...16,638,273
JBrowse link
G Slitrk2 SLIT and NTRK like family member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14550773) UniProt
Ensembl
TreeGrafter
MGI
PMID:14550773 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004624808:1,307,229...1,319,063
Ensembl chrNW_004624808:1,311,247...1,319,087
JBrowse link
G Slitrk3 SLIT and NTRK like family member 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14550773) UniProt
TreeGrafter
MGI
PMID:14550773 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004624730:43,175,690...43,191,689
Ensembl chrNW_004624730:43,181,820...43,191,531