ONTOLOGY REPORT - ANNOTATIONS
Term: central nervous system neuron development
Accession: GO:0021954
browse the term
Definition: The process whose specific outcome is the progression of a neuron whose cell body is located in the central nervous system, from initial commitment of the cell to a neuronal fate, to the fully functional differentiated neuron.
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Agbl4
AGBL carboxypeptidase 4
acts_upstream_of_or_within
ISO
MGI:1918244 (PMID:30420556)
RGD
PMID:30420556
NCBI chr 5:125,254,963...126,534,367
Ensembl chr 5:125,254,956...126,534,367
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Agtpbp1
ATP/GTP binding carboxypeptidase 1
acts_upstream_of_or_within
ISO
MGI:1918244 (PMID:30420556)
RGD
PMID:30420556
NCBI chr17:5,120,540...5,238,874
Ensembl chr17:5,120,609...5,238,869
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Ascl1
achaete-scute family bHLH transcription factor 1
acts_upstream_of_or_within
ISO
MGI:109619|MGI:1857470 (PMID:15169849), (PMID:16469766)
RGD
PMID:15169849 PMID:16469766
NCBI chr 7:21,903,136...21,906,003
Ensembl chr 7:21,903,126...21,905,993
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Atp7a
ATPase copper transporting alpha
acts_upstream_of_or_within
ISO
MGI:1856098 (PMID:8174230)
RGD
PMID:8174230
NCBI chr X:71,094,144...71,201,550
Ensembl chr X:71,094,202...71,198,354
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Brinp1
BMP/retinoic acid inducible neural specific 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:20025061)
Ensembl RGD
PMID:20025061
GO_REF:0000107
NCBI chr 5:82,348,501...82,550,506
Ensembl chr 5:82,348,930...82,493,150
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Btg2
BTG anti-proliferation factor 2
acts_upstream_of_or_within
ISO
MGI:3525505 (PMID:20020054)
RGD
PMID:20020054
NCBI chr13:45,531,881...45,535,642
Ensembl chr13:45,531,925...45,535,628
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Cdk5
cyclin-dependent kinase 5
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1861809 (PMID:8855328)
Ensembl RGD
PMID:8855328
GO_REF:0000107
NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
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Fgf8
fibroblast growth factor 8
IMP
development of dopaminergic neurons in the midbrain and serotonergic neurons in the rostral hindbrain
RGD
PMID:9630220
RGD:2289424
NCBI chr 1:244,584,477...244,590,578
Ensembl chr 1:244,584,652...244,590,359
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Fgfr1
Fibroblast growth factor receptor 1
IMP
RGD
PMID:17314281
RGD:2325182
NCBI chr16:66,491,930...66,547,161
Ensembl chr16:66,494,042...66,547,350
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Foxg1
forkhead box G1
acts_upstream_of_or_within
ISO
(PMID:16680166)
RGD
PMID:16680166
NCBI chr 6:66,674,797...66,677,611
Ensembl chr 6:66,666,587...66,678,607
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Gabrb1
gamma-aminobutyric acid type A receptor subunit beta1
IEP
RGD
PMID:15158077
RGD:6480239
NCBI chr14:36,068,725...36,548,946
Ensembl chr14:36,080,393...36,548,948
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Gata2
GATA binding protein 2
acts_upstream_of_or_within
ISO
MGI:1857743 (PMID:10357893)
RGD
PMID:10357893
NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761
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Gba2
glucosylceramidase beta 2
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:23332916)
UniProt Ensembl RGD
PMID:23332916
GO_REF:0000024 GO_REF:0000107
NCBI chr 5:57,822,389...57,834,522
Ensembl chr 5:57,822,389...57,834,072
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Hprt1
hypoxanthine phosphoribosyltransferase 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857299 (PMID:9886073)
Ensembl RGD
PMID:9886073
GO_REF:0000107
NCBI chr X:132,736,175...132,768,149
Ensembl chr X:132,736,096...132,768,154
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Kiaa0319
KIAA0319 homolog
acts_upstream_of_or_within
ISO
(PMID:35419947)
RGD
PMID:35419947
NCBI chr17:40,162,512...40,226,666
Ensembl chr17:40,165,084...40,225,653
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Lep
leptin
acts_upstream_of_or_within
ISO
MGI:1856424 (PMID:10592285)
RGD
PMID:10592285
NCBI chr 4:57,661,127...57,675,262
Ensembl chr 4:57,661,131...57,675,262
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Lingo1
leucine rich repeat and Ig domain containing 1
acts_upstream_of_or_within
ISO
MGI:3623893 (PMID:17726113)
RGD
PMID:17726113
NCBI chr 8:57,011,272...57,193,496
Ensembl chr 8:57,010,007...57,196,544
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Lmx1b
LIM homeobox transcription factor 1 beta
acts_upstream_of_or_within
ISO
MGI:3696968|MGI:3696982 (PMID:17151281)
RGD
PMID:17151281
NCBI chr 3:16,862,195...16,940,899
Ensembl chr 3:16,862,195...16,940,899
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Map2
microtubule-associated protein 2
involved_in
ISO IEA
(PMID:20846339) GO_REF:0000107
RGD Ensembl
PMID:20846339
GO_REF:0000107
NCBI chr 9:67,723,422...67,981,886
Ensembl chr 9:67,723,371...67,979,809
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Neurog2
neurogenin 2
acts_upstream_of_or_within
ISO
MGI:2159010|MGI:2159011|MGI:2673381|MGI:96919 (PMID:16410412)
RGD
PMID:16410412
NCBI chr 2:216,092,709...216,095,276
Ensembl chr 2:216,093,363...216,094,154
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Nova2
NOVA alternative splicing regulator 2
involved_in
ISO
(PMID:27223325)
RGD
PMID:27223325
NCBI chr 1:78,572,253...78,613,703
Ensembl chr 1:78,572,279...78,608,021
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Npy
neuropeptide Y
involved_in
ISO IEA
(PMID:20846339) GO_REF:0000107
RGD Ensembl
PMID:20846339
GO_REF:0000107
NCBI chr 4:78,881,294...78,888,495
Ensembl chr 4:78,881,264...78,888,495
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Ntrk2
neurotrophic receptor tyrosine kinase 2
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:8402890) GO_REF:0000107
UniProt RGD Ensembl
PMID:8402890
GO_REF:0000024 GO_REF:0000107
NCBI chr17:5,558,992...5,870,299
Ensembl chr17:5,559,043...5,869,136
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Pals1
protein associated with LIN7 1, MAGUK p55 family member
involved_in
ISS ISO
GO_REF:0000024 (PMID:20399730)
UniProt RGD
PMID:20399730
GO_REF:0000024
NCBI chr 6:97,548,133...97,654,163
Ensembl chr 6:97,548,630...97,653,305
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Taok1
TAO kinase 1
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:33565190) GO_REF:0000107
UniProt RGD Ensembl
PMID:33565190
GO_REF:0000024 GO_REF:0000107
NCBI chr10:62,373,072...62,465,295
Ensembl chr10:62,381,404...62,465,766
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Ttc36
tetratricopeptide repeat domain 36
acts_upstream_of_or_within
ISO
MGI:5588394 (PMID:31537781)
RGD
PMID:31537781
NCBI chr 8:45,112,737...45,116,345
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Bhlhe22
basic helix-loop-helix family, member e22
acts_upstream_of_or_within
ISO
MGI:4440742 (PMID:22284184)
RGD
PMID:22284184
NCBI chr 2:100,486,400...100,489,510
Ensembl chr 2:100,486,400...100,489,510
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Draxin
dorsal inhibitory axon guidance protein
involved_in
ISO
(PMID:23206892)
RGD
PMID:23206892
NCBI chr 5:158,530,149...158,563,457
Ensembl chr 5:158,530,342...158,564,483
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Fbxo45
F-box protein 45
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3849742 (PMID:19398581)
Ensembl RGD
PMID:19398581
GO_REF:0000107
NCBI chr11:68,551,430...68,567,053
Ensembl chr11:68,551,122...68,566,800
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Nfib
nuclear factor I/B
involved_in
ISS ISO
GO_REF:0000024 (PMID:19961580)
UniProt RGD
PMID:19961580
GO_REF:0000024
NCBI chr 5:96,759,208...96,974,001
Ensembl chr 5:96,764,653...96,975,479
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Nr2e1
nuclear receptor subfamily 2, group E, member 1
acts_upstream_of_or_within
ISO
MGI:2176490 (PMID:11997145)
RGD
PMID:11997145
NCBI chr20:46,050,134...46,071,257
Ensembl chr20:46,050,414...46,073,949
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Plxna4
plexin A4
acts_upstream_of_or_within
ISO
MGI:3578655 (PMID:15814794)
RGD
PMID:15814794
NCBI chr 4:60,720,246...61,162,206
Ensembl chr 4:60,720,255...61,162,206
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Tsku
tsukushi, small leucine rich proteoglycan
involved_in acts_upstream_of_or_within
IEA ISO ISS
GO_REF:0000107 (PMID:23206892) MGI:4867728 (PMID:21055390) GO_REF:0000024
Ensembl RGD UniProt
PMID:21055390 PMID:23206892
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:152,660,259...152,671,682
Ensembl chr 1:152,656,693...152,672,588
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Wdr47
WD repeat domain 47
acts_upstream_of_or_within
ISO
MGI:4433065|MGI:6102912 (PMID:29078390)
RGD
PMID:29078390
NCBI chr 2:196,226,757...196,287,739
Ensembl chr 2:196,205,238...196,287,739
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Tctn1
tectonic family member 1
acts_upstream_of_or_within
ISO
MGI:3716885 (PMID:16357211)
RGD
PMID:16357211
NCBI chr12:34,309,795...34,347,190
Ensembl chr12:34,309,897...34,342,267
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Arhgap35
Rho GTPase activating protein 35
involved_in
ISS ISO
GO_REF:0000024 (PMID:11283609)
UniProt RGD
PMID:11283609
GO_REF:0000024
NCBI chr 1:77,202,436...77,319,298
Ensembl chr 1:77,202,436...77,319,298
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Arhgef28
Rho guanine nucleotide exchange factor 28
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:15378065)
Ensembl RGD
PMID:15378065
GO_REF:0000107
NCBI chr 2:29,263,888...29,560,595
Ensembl chr 2:29,263,886...29,560,672
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Atg7
autophagy related 7
acts_upstream_of_or_within
ISO
MGI:3587769 (PMID:20577052)
RGD
PMID:20577052
NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
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B4galt5
beta-1,4-galactosyltransferase 5
involved_in
ISO
(PMID:30114188)
RGD
PMID:30114188
NCBI chr 3:156,018,056...156,033,983
Ensembl chr 3:156,018,053...156,070,074
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B4galt6
beta-1,4-galactosyltransferase 6
involved_in
ISS ISO
GO_REF:0000024 (PMID:30114188)
UniProt RGD
PMID:30114188
GO_REF:0000024
NCBI chr18:11,958,382...12,015,247
Ensembl chr18:11,958,390...12,015,247
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Chrnb2
cholinergic receptor nicotinic beta 2 subunit
acts_upstream_of_or_within
ISO
MGI:2158714 (PMID:12097474)
RGD
PMID:12097474
NCBI chr 2:175,181,402...175,189,619
Ensembl chr 2:175,181,402...175,189,619
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Ndel1
nudE neurodevelopment protein 1-like 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:15208636)
Ensembl RGD
PMID:15208636
GO_REF:0000107
NCBI chr10:53,505,628...53,582,025
Ensembl chr10:53,516,491...53,570,907
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Prkca
protein kinase C, alpha
IMP
RGD
PMID:18062921
RGD:2293300
NCBI chr10:92,889,390...93,288,013
Ensembl chr10:92,894,012...93,288,012
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Pten
phosphatase and tensin homolog
involved_in
ISO
(PMID:16675393)
RGD
PMID:16675393
NCBI chr 1:230,630,443...230,697,070
Ensembl chr 1:230,630,338...230,696,838
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Ptk2
protein tyrosine kinase 2
acts_upstream_of_or_within
ISO
MGI:1857596 (PMID:15378065)
RGD
PMID:15378065
NCBI chr 7:105,126,725...105,331,848
Ensembl chr 7:105,126,728...105,331,783
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Bhlhe22
basic helix-loop-helix family, member e22
acts_upstream_of_or_within
ISO
MGI:2684610|MGI:4440742|MGI:4440744 (PMID:22284184)
RGD
PMID:22284184
NCBI chr 2:100,486,400...100,489,510
Ensembl chr 2:100,486,400...100,489,510
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Chrnb2
cholinergic receptor nicotinic beta 2 subunit
acts_upstream_of_or_within
ISO
MGI:1926253|MGI:2158714 (PMID:11344259), (PMID:14687550), (PMID:15608630)
RGD
PMID:11344259 PMID:14687550 PMID:15608630
NCBI chr 2:175,181,402...175,189,619
Ensembl chr 2:175,181,402...175,189,619
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Dclk1
doublecortin-like kinase 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1277171 (PMID:16387638)
Ensembl RGD
PMID:16387638
GO_REF:0000107
NCBI chr 2:139,417,234...139,710,956
Ensembl chr 2:139,417,163...139,710,956
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Dcx
doublecortin
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1330861 (PMID:16387638)
Ensembl RGD
PMID:16387638
GO_REF:0000107
NCBI chr X:107,430,767...107,573,612
Ensembl chr X:107,430,767...107,507,476
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Ephb1
Eph receptor B1
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:2677305|MGI:2677312 (PMID:12971893)
UniProt RGD
PMID:12971893
GO_REF:0000024
NCBI chr 8:102,507,549...102,944,839
Ensembl chr 8:102,507,549...102,944,839
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Ephb2
Eph receptor B2
acts_upstream_of_or_within
ISO
(PMID:12971893)
RGD
PMID:12971893
NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059
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Ephb3
Eph receptor B3
acts_upstream_of_or_within
ISO
(PMID:12971893)
RGD
PMID:12971893
NCBI chr11:79,840,668...79,859,345
Ensembl chr11:79,840,668...79,859,370
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Kifbp
kinesin family binding protein
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:30,512,899...30,532,504
Ensembl chr20:30,512,901...30,532,476
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Mycbp2
MYC binding protein 2
acts_upstream_of_or_within involved_in
ISO
MGI:3777464|MGI:3777465 (PMID:18031680) (PMID:17901218)
RGD
PMID:17901218 PMID:18031680
NCBI chr15:79,937,354...80,175,432
Ensembl chr15:79,937,354...80,175,498
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Nr4a2
nuclear receptor subfamily 4, group A, member 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2157566 (PMID:10585298)
Ensembl RGD
PMID:10585298
GO_REF:0000107
NCBI chr 3:41,689,847...41,707,036
Ensembl chr 3:41,689,851...41,697,877
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Prdm8
PR/SET domain 8
acts_upstream_of_or_within
ISO
MGI:5315763 (PMID:22284184)
RGD
PMID:22284184
NCBI chr14:11,403,202...11,424,059
Ensembl chr14:11,404,407...11,410,993
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Sptbn4
spectrin, beta, non-erythrocytic 4
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:3710201 (PMID:17197442)
GO_Central RGD
PMID:17197442
GO_REF:0000033
NCBI chr 1:82,650,750...82,738,345
Ensembl chr 1:82,650,751...82,737,228
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Crk
CRK proto-oncogene, adaptor protein
acts_upstream_of_or_within
ISO
MGI:104686 (PMID:19074029)
RGD
PMID:19074029
NCBI chr10:60,530,469...60,556,703
Ensembl chr10:60,530,464...60,553,406
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Crkl
CRK like proto-oncogene, adaptor protein
acts_upstream_of_or_within
ISO
MGI:88508 (PMID:19074029)
RGD
PMID:19074029
NCBI chr11:83,528,788...83,563,214
Ensembl chr11:83,526,530...83,563,238
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L1cam
L1 cell adhesion molecule
IMP
RGD
PMID:27027721
RGD:401959323
NCBI chr X:151,597,270...151,623,776
Ensembl chr X:151,597,277...151,623,857
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Nanos1
nanos C2HC-type zinc finger 1
acts_upstream_of_or_within
ISO
(PMID:26609159)
RGD
PMID:26609159
NCBI chr 1:259,897,663...259,901,561
Ensembl chr 1:259,897,939...259,898,730
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Samd4b
sterile alpha motif domain containing 4B
acts_upstream_of_or_within
ISO
(PMID:26609159)
RGD
PMID:26609159
NCBI chr 1:83,689,413...83,728,652
Ensembl chr 1:83,689,413...83,713,853
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Chrna2
cholinergic receptor nicotinic alpha 2 subunit
part_of
IEP
RGD
PMID:17046198
RGD:152995358
NCBI chr15:40,342,317...40,358,601
Ensembl chr15:40,342,317...40,358,601
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Rac1
Rac family small GTPase 1
acts_upstream_of_or_within
ISO
MGI:2180784 (PMID:23258346)
RGD
PMID:23258346
NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251
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Rac3
Rac family small GTPase 3
acts_upstream_of_or_within
ISO
MGI:97845 (PMID:23258346)
RGD
PMID:23258346
NCBI chr10:106,002,808...106,005,243
Ensembl chr10:105,993,087...106,005,260
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Arx
aristaless related homeobox
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2679972 (PMID:17460091)
Ensembl RGD
PMID:17460091
GO_REF:0000107
NCBI chr X:58,016,233...58,028,149
Ensembl chr X:58,016,233...58,028,142
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Cntn2
contactin 2
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:11714688) GO_REF:0000107
RGD Ensembl
PMID:11714688
GO_REF:0000107
NCBI chr13:43,942,868...43,975,973
Ensembl chr13:43,947,265...43,975,887
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Drd1
dopamine receptor D1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857875 (PMID:17409246)
Ensembl RGD
PMID:17409246
GO_REF:0000107
NCBI chr17:10,540,440...10,544,971
Ensembl chr17:10,540,558...10,545,002
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Drd2
dopamine receptor D2
acts_upstream_of_or_within
ISO
MGI:1857875 (PMID:17409246)
RGD
PMID:17409246
NCBI chr 8:58,605,403...58,669,339
Ensembl chr 8:49,708,927...49,772,875
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Fezf2
Fez family zinc finger 2
acts_upstream_of_or_within
ISO
MGI:3046867 (PMID:21338885)
RGD
PMID:21338885
NCBI chr15:12,768,614...12,777,554
Ensembl chr15:12,773,762...12,777,554
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Lhx6
LIM homeobox 6
acts_upstream_of_or_within
ISO
MGI:3702518 (PMID:17376969)
RGD
PMID:17376969
NCBI chr 3:19,432,439...19,456,268
Ensembl chr 3:19,433,494...19,456,061
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Slit1
slit guidance ligand 1
NOT|involved_in
ISO
(PMID:11748139)
RGD
PMID:11748139
NCBI chr 1:240,409,559...240,558,127
Ensembl chr 1:240,409,561...240,558,127
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Slit2
slit guidance ligand 2
NOT|involved_in
ISO
(PMID:11748139)
RGD
PMID:11748139
NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
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Slit3
slit guidance ligand 3
NOT|involved_in
ISO
(PMID:11748139)
RGD
PMID:11748139
NCBI chr10:19,571,798...20,156,634
Ensembl chr10:19,571,684...20,156,634
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Robo1
roundabout guidance receptor 1
involved_in
ISO
(PMID:15207848)
RGD
PMID:15207848
NCBI chr11:10,580,863...11,621,675
Ensembl chr11:10,580,908...11,620,203
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Slit2
slit guidance ligand 2
involved_in
ISO IEA
(PMID:15207848) GO_REF:0000107
RGD Ensembl
PMID:15207848
GO_REF:0000107
NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
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Bhlhe22
basic helix-loop-helix family, member e22
acts_upstream_of_or_within
ISO
MGI:2684610|MGI:4440742|MGI:4440744 (PMID:22284184)
RGD
PMID:22284184
NCBI chr 2:100,486,400...100,489,510
Ensembl chr 2:100,486,400...100,489,510
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Grcc10
gene rich cluster, C10 gene
involved_in
ISO
(PMID:23453665), (PMID:23453666), (PMID:23633300), (PMID:24798461)
RGD
PMID:23453665 PMID:23453666 PMID:23633300 PMID:24798461
NCBI chr 4:157,551,276...157,552,924
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Nin
ninein
acts_upstream_of_or_within
ISO
MGI:1344407 (PMID:25741725)
RGD
PMID:25741725
NCBI chr 6:88,525,405...88,627,710
Ensembl chr 6:88,525,742...88,627,639
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Pafah1b1
platelet-activating factor acetylhydrolase 1b, regulatory subunit 1
involved_in
ISO
(PMID:9063735)
RGD
PMID:9063735
NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808
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Prdm8
PR/SET domain 8
acts_upstream_of_or_within
ISO
MGI:5315763 (PMID:22284184)
RGD
PMID:22284184
NCBI chr14:11,403,202...11,424,059
Ensembl chr14:11,404,407...11,410,993
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Szt2
SZT2 subunit of KICSTOR complex
involved_in
ISO
(PMID:23932106)
RGD
PMID:23932106
NCBI chr 5:131,897,250...131,943,953
Ensembl chr 5:131,897,275...131,943,904
G
Tsku
tsukushi, small leucine rich proteoglycan
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:4867728 (PMID:21055390)
Ensembl RGD
PMID:21055390
GO_REF:0000107
NCBI chr 1:152,660,259...152,671,682
Ensembl chr 1:152,656,693...152,672,588
G
Zeb2
zinc finger E-box binding homeobox 2
acts_upstream_of_or_within
ISO
MGI:2387499|MGI:2668659 (PMID:25741725)
RGD
PMID:25741725
NCBI chr 3:29,214,581...29,344,890
Ensembl chr 3:29,218,301...29,345,157
G
Scn1b
sodium voltage-gated channel beta subunit 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3043422 (PMID:18354028)
Ensembl RGD
PMID:18354028
GO_REF:0000107
NCBI chr 1:86,353,917...86,363,820
Ensembl chr 1:86,353,917...86,363,739
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Slit2
slit guidance ligand 2
involved_in
ISO IEA
(PMID:10975526) GO_REF:0000107
RGD Ensembl
PMID:10975526
GO_REF:0000107
NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
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Bhlhe22
basic helix-loop-helix family, member e22
acts_upstream_of_or_within
ISO
MGI:2684610|MGI:4440742|MGI:4440744|MGI:99217 (PMID:22284184)
RGD
PMID:22284184
NCBI chr 2:100,486,400...100,489,510
Ensembl chr 2:100,486,400...100,489,510
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Cdh11
cadherin 11
acts_upstream_of_or_within
ISO
MGI:1930001 (PMID:22284184)
RGD
PMID:22284184
NCBI chr19:2,148,447...2,305,754
Ensembl chr19:2,148,458...2,304,272
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Epha4
Eph receptor A4
involved_in
ISS ISO
GO_REF:0000024 (PMID:9789074)
UniProt RGD
PMID:9789074
GO_REF:0000024
NCBI chr 9:78,815,460...78,958,139
Ensembl chr 9:78,815,460...78,958,139
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Fbxo45
F-box protein 45
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3849742 (PMID:19398581)
Ensembl RGD
PMID:19398581
GO_REF:0000107
NCBI chr11:68,551,430...68,567,053
Ensembl chr11:68,551,122...68,566,800
G
Nin
ninein
acts_upstream_of_or_within
ISO
MGI:1344407 (PMID:25741725)
RGD
PMID:25741725
NCBI chr 6:88,525,405...88,627,710
Ensembl chr 6:88,525,742...88,627,639
G
Prdm8
PR/SET domain 8
acts_upstream_of_or_within
ISO
MGI:5315763 (PMID:22284184)
RGD
PMID:22284184
NCBI chr14:11,403,202...11,424,059
Ensembl chr14:11,404,407...11,410,993
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Spg11
SPG11 vesicle trafficking associated, spatacsin
acts_upstream_of_or_within
ISO
MGI:6451766 (PMID:28237315)
RGD
PMID:28237315
NCBI chr 3:109,007,658...109,072,904
Ensembl chr 3:109,008,135...109,072,911
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Zeb2
zinc finger E-box binding homeobox 2
acts_upstream_of_or_within
ISO
MGI:2387499|MGI:2668659 (PMID:25741725)
RGD
PMID:25741725
NCBI chr 3:29,214,581...29,344,890
Ensembl chr 3:29,218,301...29,345,157
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Phox2b
paired-like homeobox 2b
acts_upstream_of_or_within
ISO
MGI:1926861 (PMID:12885554)
RGD
PMID:12885554
NCBI chr14:41,066,012...41,069,202
Ensembl chr14:41,066,264...41,068,978
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Arx
aristaless related homeobox
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2429693 (PMID:15677725)
Ensembl RGD
PMID:15677725
GO_REF:0000107
NCBI chr X:58,016,233...58,028,149
Ensembl chr X:58,016,233...58,028,142
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Rac1
Rac family small GTPase 1
acts_upstream_of_or_within
ISO
MGI:1932522|MGI:2663662 (PMID:17409253)
RGD
PMID:17409253
NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251
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Fgf8
fibroblast growth factor 8
IMP
induction of dopaminergic neurons in the rostral forebrain
RGD
PMID:9630220
RGD:2289424
NCBI chr 1:244,584,477...244,590,578
Ensembl chr 1:244,584,652...244,590,359
G
Gbx2
gastrulation brain homeobox 2
acts_upstream_of_or_within
ISO
MGI:1857634 (PMID:21048141)
RGD
PMID:21048141
NCBI chr 9:90,509,633...90,512,212
Ensembl chr 9:90,509,633...90,512,212
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Gnaq
G protein subunit alpha q
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2151661 (PMID:15340067)
Ensembl RGD
PMID:15340067
GO_REF:0000107
NCBI chr 1:213,425,631...213,671,947
Ensembl chr 1:213,424,465...213,667,672
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Lhx6
LIM homeobox 6
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:1096343 (PMID:15217369)
GO_Central RGD
PMID:15217369
GO_REF:0000033
NCBI chr 3:19,432,439...19,456,268
Ensembl chr 3:19,433,494...19,456,061
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Lhx8
LIM homeobox 8
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:1306803 (PMID:15217369)
GO_Central RGD
PMID:15217369
GO_REF:0000033
NCBI chr 2:243,244,958...243,269,624
Ensembl chr 2:243,244,961...243,269,416
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Rapgef2
Rap guanine nucleotide exchange factor 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:19453629)
UniProt RGD
PMID:19453629
GO_REF:0000024
NCBI chr 2:164,207,513...164,322,157
Ensembl chr 2:164,207,513...164,244,247
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Secisbp2
SECIS binding protein 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2181426|MGI:5583885 (PMID:24844465)
Ensembl RGD
PMID:24844465
GO_REF:0000107
NCBI chr17:13,538,513...13,569,573
Ensembl chr17:13,538,513...13,569,523
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Sox1
SRY-box transcription factor 1
acts_upstream_of_or_within
ISO
MGI:2137412 (PMID:15882093)
RGD
PMID:15882093
NCBI chr16:77,135,577...77,139,592
Ensembl chr16:77,137,584...77,138,762
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Tfap2a
transcription factor AP-2 alpha
acts_upstream_of_or_within
ISO
MGI:1888387 (PMID:10803593)
RGD
PMID:10803593
NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507
G
Ndnf
neuron-derived neurotrophic factor
involved_in
ISO
(PMID:31883645)
RGD
PMID:31883645
NCBI chr 4:94,944,392...94,981,871
Ensembl chr 4:94,944,360...94,981,873
G
Nrp1
neuropilin 1
involved_in
ISO
(PMID:21059704)
RGD
PMID:21059704
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
G
Nrp2
neuropilin 2
involved_in
IEA ISO
GO_REF:0000107 (PMID:21059704)
Ensembl RGD
PMID:21059704
GO_REF:0000107
NCBI chr 9:64,122,815...64,238,007
Ensembl chr 9:64,123,132...64,237,958
G
Plxna1
plexin A1
involved_in
ISO
UniProtKB:P70208 (PMID:31690636)
RGD
PMID:31690636
NCBI chr 4:121,737,934...121,782,901
Ensembl chr 4:121,737,945...122,024,196
G
Plxna3
plexin A3
involved_in
ISO
UniProtKB:P70206 (PMID:31690636)
RGD
PMID:31690636
NCBI chr X:152,115,699...152,131,608
Ensembl chr X:152,115,819...152,131,603
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Sema3a
semaphorin 3A
involved_in
ISO
(PMID:21059704)
RGD
PMID:21059704
NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
G
Sema3e
semaphorin 3E
involved_in
ISO
(PMID:25985275)
RGD
PMID:25985275
NCBI chr 4:20,297,534...20,555,287
Ensembl chr 4:20,299,718...20,555,229
G
Nhlh2
nescient helix loop helix 2
acts_upstream_of_or_within_positive_effect
ISO
(PMID:23785158)
RGD
PMID:23785158
NCBI chr 2:189,444,287...189,449,625
Ensembl chr 2:189,442,711...189,449,625
G
Ubb
ubiquitin B
acts_upstream_of_or_within
ISO
MGI:3774112 (PMID:18299572)
RGD
PMID:18299572
NCBI chr10:47,247,630...47,249,335
Ensembl chr10:47,245,637...47,249,333
G
Atf5
activating transcription factor 5
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:5467393 (PMID:23090999)
Ensembl RGD
PMID:23090999
GO_REF:0000107
NCBI chr 1:95,295,602...95,299,755
Ensembl chr 1:95,295,610...95,299,707
G
Robo1
roundabout guidance receptor 1
involved_in
ISO
UniProtKB:Q7TPD3 (PMID:17360927)
RGD
PMID:17360927
NCBI chr11:10,580,863...11,621,675
Ensembl chr11:10,580,908...11,620,203
G
Robo2
roundabout guidance receptor 2
involved_in
ISO
(PMID:17360927)
RGD
PMID:17360927
NCBI chr11:12,528,949...14,096,726
Ensembl chr11:12,528,951...13,041,536
G
Sall3
spalt-like transcription factor 3
acts_upstream_of_or_within
ISO
MGI:3052730 (PMID:18260139)
RGD
PMID:18260139
NCBI chr18:74,406,066...74,425,974
Ensembl chr18:74,407,560...74,426,789
G
Wnt5a
Wnt family member 5A
involved_in
IEA ISO
GO_REF:0000107 (PMID:21539518)
Ensembl RGD
PMID:21539518
GO_REF:0000107
NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234
G
Fgfr1
Fibroblast growth factor receptor 1
IMP
RGD
PMID:20083104
RGD:2325172
NCBI chr16:66,491,930...66,547,161
Ensembl chr16:66,494,042...66,547,350
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Atg7
autophagy related 7
acts_upstream_of_or_within
ISO
MGI:2386545|MGI:3587769 (PMID:16625205)
RGD
PMID:16625205
NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
G
Atp7a
ATPase copper transporting alpha
acts_upstream_of_or_within
ISO
MGI:1856466 (PMID:2473662)
RGD
PMID:2473662
NCBI chr X:71,094,144...71,201,550
Ensembl chr X:71,094,202...71,198,354
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Dclk2
doublecortin-like kinase 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1277171 (PMID:19342486)
Ensembl RGD
PMID:19342486
GO_REF:0000107
NCBI chr 2:172,202,733...172,338,411
Ensembl chr 2:172,208,706...172,338,250
G
Dcx
doublecortin
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1918012 (PMID:19342486)
Ensembl RGD
PMID:19342486
GO_REF:0000107
NCBI chr X:107,430,767...107,573,612
Ensembl chr X:107,430,767...107,507,476
G
Fgfr2
fibroblast growth factor receptor 2
involved_in
ISO
(PMID:20410112)
RGD
PMID:20410112
NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626
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Ogdh
oxoglutarate dehydrogenase
involved_in
IEA ISO
GO_REF:0000107 (PMID:16901643)
Ensembl RGD
PMID:16901643
GO_REF:0000107
NCBI chr14:81,150,021...81,217,479
Ensembl chr14:81,150,091...81,217,479
G
Plxna3
plexin A3
acts_upstream_of_or_within
ISO
MGI:2386961 (PMID:11683995)
RGD
PMID:11683995
NCBI chr X:152,115,699...152,131,608
Ensembl chr X:152,115,819...152,131,603
G
Scyl2
SCY1 like pseudokinase 2
involved_in
ISO
(PMID:26203146)
RGD
PMID:26203146
NCBI chr 7:24,064,404...24,117,338
Ensembl chr 7:24,064,404...24,117,305
G
Slc4a10
solute carrier family 4 member 10
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3774019 (PMID:18165320)
Ensembl RGD
PMID:18165320
GO_REF:0000107
NCBI chr 3:46,665,076...46,959,088
Ensembl chr 3:46,665,265...46,957,268
G
Uqcrq
ubiquinol-cytochrome c reductase, complex III subunit VII
involved_in
ISO
(PMID:16901643)
RGD
PMID:16901643
NCBI chr10:37,585,864...37,589,328
Ensembl chr10:37,586,888...37,589,169
G
Disc1
DISC1 scaffold protein
IMP
RGD
PMID:16299498
RGD:5509783
NCBI chr19:53,014,201...53,223,617
Ensembl chr19:53,014,616...53,219,778
G
Foxg1
forkhead box G1
acts_upstream_of_or_within
ISO
(PMID:22726835)
RGD
PMID:22726835
NCBI chr 6:66,674,797...66,677,611
Ensembl chr 6:66,666,587...66,678,607
G
Zmiz1
zinc finger, MIZ-type containing 1
involved_in
ISO
(PMID:30639322)
RGD
PMID:30639322
NCBI chr16:1,027,083...1,232,616
Ensembl chr16:1,027,325...1,232,597
G
Adarb1
adenosine deaminase, RNA-specific, B1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:4840554 (PMID:20826656)
Ensembl RGD
PMID:20826656
GO_REF:0000107
NCBI chr20:11,222,569...11,350,854
Ensembl chr20:11,222,583...11,350,852
G
Dcc
DCC netrin 1 receptor
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1934924 (PMID:9126737)
Ensembl RGD
PMID:9126737
GO_REF:0000107
NCBI chr18:64,868,987...65,972,783
Ensembl chr18:64,873,898...65,972,740
G
Gli2
GLI family zinc finger 2
acts_upstream_of_or_within
ISO
MGI:1857509 (PMID:10409510)
RGD
PMID:10409510
NCBI chr13:29,946,882...30,163,589
Ensembl chr13:29,946,809...30,163,574
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all