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ONTOLOGY REPORT - ANNOTATIONS


Term:telencephalon development
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Accession:GO:0021537 term browser browse the term
Definition:The process whose specific outcome is the progression of the telencephalon over time, from its formation to the mature structure. The telencephalon is the paired anteriolateral division of the prosencephalon plus the lamina terminalis from which the olfactory lobes, cerebral cortex, and subcortical nuclei are derived.
Synonyms:exact_synonym: cerebrum development



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telencephalon development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afdn afadin, adherens junction formation factor acts_upstream_of_or_within ISO MGI:95387 (PMID:25100583) RGD PMID:25100583 NCBI chr 1:53,905,344...54,034,216
Ensembl chr 1:53,905,373...54,034,216
JBrowse link
G Avpr1a arginine vasopressin receptor 1A IEP RGD PMID:11021977 RGD:2304223 NCBI chr 7:58,114,306...58,118,230
Ensembl chr 7:58,114,284...58,122,215
JBrowse link
G Avpr2 arginine vasopressin receptor 2 IEP RGD PMID:11021977 RGD:2304223 NCBI chr  X:151,633,501...151,636,155
Ensembl chr  X:151,633,522...151,635,989
JBrowse link
G Bmp2 bone morphogenetic protein 2 acts_upstream_of_or_within ISO (PMID:9187146) RGD PMID:9187146 NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO (PMID:9187146) RGD PMID:9187146 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
JBrowse link
G Cdh2 cadherin 2 acts_upstream_of_or_within ISO MGI:95387 (PMID:25100583) RGD PMID:25100583 NCBI chr18:7,776,704...7,990,934
Ensembl chr18:7,776,704...7,990,167
JBrowse link
G Cdk5 cyclin-dependent kinase 5 acts_upstream_of_or_within ISO MGI:1928281|MGI:3043819 (PMID:18032654) RGD PMID:18032654 NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
JBrowse link
G Emx1 empty spiracles homeobox 1 acts_upstream_of_or_within ISO MGI:1314653|MGI:88355 (PMID:25100583) RGD PMID:25100583 NCBI chr 4:117,725,148...117,741,616
Ensembl chr 4:117,725,155...117,741,613
JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 IEP RGD PMID:12571115 RGD:2290000 NCBI chr 9:69,523,733...70,596,743
Ensembl chr 9:69,531,481...70,596,595
JBrowse link
G Fas Fas cell surface death receptor IEP RGD PMID:10024361 RGD:8662883 NCBI chr 1:231,798,963...231,832,591
Ensembl chr 1:231,798,960...231,832,591
JBrowse link
G Fezf1 Fez family zinc finger 1 involved_in ISO (PMID:20431123) RGD PMID:20431123 NCBI chr 4:51,762,751...51,766,078
Ensembl chr 4:51,762,751...51,766,078
JBrowse link
G Fezf2 Fez family zinc finger 2 acts_upstream_of_or_within
involved_in
ISO MGI:104876|MGI:1920441 (PMID:20431123) RGD PMID:20431123 NCBI chr15:12,768,614...12,777,554
Ensembl chr15:12,773,762...12,777,554
JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO MGI:1857843|MGI:2150348 (PMID:16613831) RGD PMID:16613831 NCBI chr 1:244,584,477...244,590,578
Ensembl chr 1:244,584,652...244,590,359
JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856276 (PMID:10625551), (PMID:19036983), (PMID:19048639) RGD PMID:10625551 PMID:19036983 PMID:19048639 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
JBrowse link
G Gmppa GDP-mannose pyrophosphorylase A acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:33755596)
GO_REF:0000107
RGD
Ensembl
PMID:33755596 GO_REF:0000107 NCBI chr 9:76,926,724...76,934,274
Ensembl chr 9:76,926,739...76,934,269
JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:104876|MGI:2149672 (PMID:18579678), (PMID:19050759)
Ensembl
RGD
PMID:18579678 PMID:19050759 GO_REF:0000107 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
JBrowse link
G Hes5 hes family bHLH transcription factor 5 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:104853|MGI:1859823|MGI:1920441 (PMID:18579678), (PMID:20431123)
UniProt
RGD
PMID:18579678 PMID:20431123 GO_REF:0000024 NCBI chr 5:165,522,138...165,523,684
Ensembl chr 5:165,522,234...165,523,001
JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within ISO MGI:3823090 (PMID:19036983) RGD PMID:19036983 NCBI chr15:31,573,325...31,666,068
Ensembl chr15:31,573,376...31,672,147
JBrowse link
G Kat2a lysine acetyltransferase 2A acts_upstream_of_or_within ISO MGI:3711317 (PMID:17325035) RGD PMID:17325035 NCBI chr10:85,632,216...85,640,561
Ensembl chr10:85,632,216...85,640,166
JBrowse link
G Lhx1 LIM homeobox 1 involved_in ISO (PMID:7909549) RGD PMID:7909549 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617
JBrowse link
G Lhx2 LIM homeobox 2 acts_upstream_of_or_within ISO MGI:1890208|MGI:4399044 (PMID:11165475), (PMID:11719201), (PMID:17493606), (PMID:19820705) RGD PMID:11165475 PMID:11719201 PMID:17493606 PMID:19820705 NCBI chr 3:22,113,619...22,143,909
Ensembl chr 3:22,126,007...22,143,908
JBrowse link
G Ncor2 nuclear receptor co-repressor 2 acts_upstream_of_or_within ISO MGI:3765904 (PMID:17928865) RGD PMID:17928865 NCBI chr12:31,466,418...31,628,319
Ensembl chr12:31,466,412...31,628,319
JBrowse link
G Nkx2-1 NK2 homeobox 1 acts_upstream_of_or_within ISO MGI:3653645 (PMID:18786356) RGD PMID:18786356 NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791
JBrowse link
G Nrgn neurogranin IEP RGD PMID:8783271 RGD:9835396 NCBI chr 8:37,255,462...37,263,659
Ensembl chr 8:37,256,930...37,257,516
JBrowse link
G Oxtr oxytocin receptor IEP RGD PMID:11021977 RGD:2304223 NCBI chr 4:145,598,549...145,614,674
Ensembl chr 4:145,599,561...145,614,674
JBrowse link
G Pfdn1 prefoldin subunit 1 acts_upstream_of_or_within ISO MGI:3800373 (PMID:18566413) RGD PMID:18566413 NCBI chr18:28,014,145...28,067,148
Ensembl chr18:28,014,145...28,067,064
JBrowse link
G Rfx4 regulatory factor X4 acts_upstream_of_or_within ISO MGI:3799278 (PMID:19887680) RGD PMID:19887680 NCBI chr 7:18,853,065...19,015,378
Ensembl chr 7:18,853,322...19,014,967
JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within ISO MGI:3716208 (PMID:17558409) RGD PMID:17558409 NCBI chr19:15,692,189...15,785,083
Ensembl chr19:15,692,150...15,785,083
JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 IEP RGD PMID:22331407 RGD:6484221 NCBI chr 8:119,220,905...119,318,816
Ensembl chr 8:119,220,905...119,318,769
JBrowse link
G Six3 SIX homeobox 3 acts_upstream_of_or_within
involved_in
ISO MGI:2450901 (PMID:18094027)
(PMID:18694563)
RGD PMID:18094027 PMID:18694563 NCBI chr 6:9,039,017...9,043,336
Ensembl chr 6:9,036,434...9,053,301
JBrowse link
G Slc1a2 solute carrier family 1 member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2449707 (PMID:9180080)
Ensembl
RGD
PMID:9180080 GO_REF:0000107 NCBI chr 3:89,005,129...89,135,469
Ensembl chr 3:89,005,129...89,126,498
JBrowse link
G Slc8a1 solute carrier family 8 member A1 IEP RGD PMID:12502534 RGD:2316981 NCBI chr 6:13,194,609...13,547,369
Ensembl chr 6:13,194,662...13,535,628
JBrowse link
G Slc8a2 solute carrier family 8 member A2 IEP RGD PMID:12502534 RGD:2316981 NCBI chr 1:76,816,583...76,852,928
Ensembl chr 1:76,808,725...76,847,072
JBrowse link
G Slc8a3 solute carrier family 8 member A3 IEP RGD PMID:11036162 RGD:2316983 NCBI chr 6:100,874,359...101,007,989
Ensembl chr 6:100,874,369...101,007,508
JBrowse link
G Tctn1 tectonic family member 1 acts_upstream_of_or_within ISO MGI:3716885 (PMID:16357211) RGD PMID:16357211 NCBI chr12:34,309,795...34,347,190
Ensembl chr12:34,309,897...34,342,267
JBrowse link
ammon gyrus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp8 LDL receptor related protein 8 involved_in ISO (PMID:18778775) RGD PMID:18778775 NCBI chr 5:122,563,468...122,635,434
Ensembl chr 5:122,563,453...122,631,352
JBrowse link
anterior commissure morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family, member e22 acts_upstream_of_or_within ISO MGI:4440742 (PMID:22284184) RGD PMID:22284184 NCBI chr 2:100,486,400...100,489,510
Ensembl chr 2:100,486,400...100,489,510
JBrowse link
G Draxin dorsal inhibitory axon guidance protein involved_in ISO (PMID:23206892) RGD PMID:23206892 NCBI chr 5:158,530,149...158,563,457
Ensembl chr 5:158,530,342...158,564,483
JBrowse link
G Fbxo45 F-box protein 45 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3849742 (PMID:19398581)
Ensembl
RGD
PMID:19398581 GO_REF:0000107 NCBI chr11:68,551,430...68,567,053
Ensembl chr11:68,551,122...68,566,800
JBrowse link
G Nfib nuclear factor I/B involved_in ISS
ISO
GO_REF:0000024
(PMID:19961580)
UniProt
RGD
PMID:19961580 GO_REF:0000024 NCBI chr 5:96,759,208...96,974,001
Ensembl chr 5:96,764,653...96,975,479
JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within ISO MGI:2176490 (PMID:11997145) RGD PMID:11997145 NCBI chr20:46,050,134...46,071,257
Ensembl chr20:46,050,414...46,073,949
JBrowse link
G Plxna4 plexin A4 acts_upstream_of_or_within ISO MGI:3578655 (PMID:15814794) RGD PMID:15814794 NCBI chr 4:60,720,246...61,162,206
Ensembl chr 4:60,720,255...61,162,206
JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan involved_in
acts_upstream_of_or_within
IEA
ISO
ISS
GO_REF:0000107
(PMID:23206892)
MGI:4867728 (PMID:21055390)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:21055390 PMID:23206892 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:152,660,259...152,671,682
Ensembl chr 1:152,656,693...152,672,588
JBrowse link
G Wdr47 WD repeat domain 47 acts_upstream_of_or_within ISO MGI:4433065|MGI:6102912 (PMID:29078390) RGD PMID:29078390 NCBI chr 2:196,226,757...196,287,739
Ensembl chr 2:196,205,238...196,287,739
JBrowse link
caudate nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp2 forkhead box P2 involved_in ISO
IEA
(PMID:11872605)
GO_REF:0000107
RGD
Ensembl
PMID:11872605 GO_REF:0000107 NCBI chr 4:43,133,827...43,712,442
Ensembl chr 4:43,133,912...43,711,683
JBrowse link
cell motility involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmerb1 bMERB domain containing 1 acts_upstream_of ISO (PMID:25099998) RGD PMID:25099998 NCBI chr10:1,779,834...1,946,586
Ensembl chr10:1,779,835...1,946,575
JBrowse link
G Dab2ip DAB2 interacting protein involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:23056358)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:23056358 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:18,915,290...19,086,282
Ensembl chr 3:18,915,290...19,086,280
JBrowse link
cell-cell adhesion involved in neuronal-glial interactions involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dab1 DAB adaptor protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856801 (PMID:15091337)
Ensembl
RGD
PMID:15091337 GO_REF:0000107 NCBI chr 5:118,392,953...119,513,625
Ensembl chr 5:119,140,533...119,510,552
JBrowse link
cerebral cortex cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dab1 DAB adaptor protein 1 acts_upstream_of_or_within ISO MGI:3050637 (PMID:15249135) RGD PMID:15249135 NCBI chr 5:118,392,953...119,513,625
Ensembl chr 5:119,140,533...119,510,552
JBrowse link
G Dixdc1 DIX domain containing 1 involved_in ISO (PMID:20624590) RGD PMID:20624590 NCBI chr 8:51,007,835...51,081,191
Ensembl chr 8:51,007,838...51,081,090
JBrowse link
G Efhc1 EF-hand domain containing 1 involved_in ISO (PMID:22926142) RGD PMID:22926142 NCBI chr 9:23,375,815...23,414,283
Ensembl chr 9:23,375,840...23,414,283
JBrowse link
G Egfr epidermal growth factor receptor acts_upstream_of_or_within ISO MGI:1856402 (PMID:7618084) RGD PMID:7618084 NCBI chr14:91,176,979...91,349,722
Ensembl chr14:91,177,067...91,344,382
JBrowse link
G Fgf13 fibroblast growth factor 13 involved_in ISS
ISO
GO_REF:0000024
(PMID:22726441)
UniProt
RGD
PMID:22726441 GO_REF:0000024 NCBI chr  X:137,276,498...137,800,056
Ensembl chr  X:137,276,511...137,800,391
JBrowse link
G Htr6 5-hydroxytryptamine receptor 6 involved_in ISS
ISO
GO_REF:0000024
(PMID:25078650)
UniProt
RGD
PMID:25078650 GO_REF:0000024 NCBI chr 5:151,295,269...151,312,853
Ensembl chr 5:151,296,662...151,311,912
JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:2156191 (PMID:16920270) RGD PMID:16920270 NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497
JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:18786357)
Ensembl
RGD
PMID:18786357 GO_REF:0000107 NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791
JBrowse link
G Pex13 peroxisomal biogenesis factor 13 acts_upstream_of_or_within ISO MGI:2384515 (PMID:12897163) RGD PMID:12897163 NCBI chr14:97,602,829...97,621,233
Ensembl chr14:97,603,539...97,621,262
JBrowse link
G Pex5 peroxisomal biogenesis factor 5 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:2154454 (PMID:10653000), (PMID:9288097)
GO_REF:0000107
RGD
Ensembl
PMID:9288097 PMID:10653000 GO_REF:0000107 NCBI chr 4:157,270,671...157,296,432
Ensembl chr 4:157,270,672...157,296,431
JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO MGI:1857974 (PMID:16079160) RGD PMID:16079160 NCBI chr 6:103,323,052...103,375,088
Ensembl chr 6:103,323,120...103,371,650
JBrowse link
G Rhoa ras homolog family member A acts_upstream_of_or_within ISO MGI:4950374 (PMID:22405202) RGD PMID:22405202 NCBI chr 8:108,991,926...109,025,746
Ensembl chr 8:108,991,954...109,025,746
JBrowse link
cerebral cortex development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afdn afadin, adherens junction formation factor acts_upstream_of_or_within ISO MGI:5607284|MGI:95387 (PMID:25100583) RGD PMID:25100583 NCBI chr 1:53,905,344...54,034,216
Ensembl chr 1:53,905,373...54,034,216
JBrowse link
G Ahsg alpha-2-HS-glycoprotein IEP RGD PMID:2423927 RGD:1626077 NCBI chr11:78,121,388...78,127,998
Ensembl chr11:78,117,918...78,145,999
JBrowse link
G Akirin2 akirin 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:27871306)
UniProt
RGD
PMID:27871306 GO_REF:0000024 NCBI chr 5:49,108,231...49,122,566
Ensembl chr 5:49,108,220...49,122,568
JBrowse link
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:1857470 (PMID:17678855) RGD PMID:17678855 NCBI chr 7:21,903,136...21,906,003
Ensembl chr 7:21,903,126...21,905,993
JBrowse link
G Aspm assembly factor for spindle microtubules acts_upstream_of_or_within ISO MGI:5573152 (PMID:24220505) RGD PMID:24220505 NCBI chr13:51,074,849...51,123,755
Ensembl chr13:51,074,849...51,123,755
JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within ISO MGI:2386545|MGI:3587769 (PMID:16625205) RGD PMID:16625205 NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
JBrowse link
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase IEP RGD PMID:7057182 RGD:2301991 NCBI chr 9:73,164,846...73,184,897
Ensembl chr 9:73,164,846...73,184,889
JBrowse link
G Atoh1 atonal bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:2155983 (PMID:16325379) RGD PMID:16325379 NCBI chr 4:93,912,068...93,914,163
Ensembl chr 4:93,912,068...93,914,154
JBrowse link
G Atp1a3 ATPase Na+/K+ transporting subunit alpha 3 acts_upstream_of_or_within IEP
ISO
MGI:4356167 (PMID:23527305) RGD PMID:23527305 PMID:19362129 RGD:11576282 NCBI chr 1:80,572,790...80,601,936
Ensembl chr 1:80,572,796...80,601,918
JBrowse link
G Bad BCL2-associated agonist of cell death IEP RGD PMID:9813151 RGD:2315711 NCBI chr 1:204,133,502...204,142,829
Ensembl chr 1:204,131,501...204,142,823
JBrowse link
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within IEP
ISO
MGI:1857429 (PMID:15342910) RGD PMID:15342910 PMID:9813151 RGD:2315711 NCBI chr 1:105,076,472...105,081,906
Ensembl chr 1:95,938,808...95,945,368
JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 acts_upstream_of_or_within ISO MGI:3767672 (PMID:18032602) RGD PMID:18032602 NCBI chr 1:202,184,812...202,204,118
Ensembl chr 1:202,186,125...202,204,086
JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 acts_upstream_of_or_within ISO MGI:3521669 (PMID:18032602) RGD PMID:18032602 NCBI chr19:10,909,653...10,944,998
Ensembl chr19:10,909,619...10,944,993
JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within ISO MGI:3045473 (PMID:18032602) RGD PMID:18032602 NCBI chr 8:59,731,912...59,765,408
Ensembl chr 8:59,731,912...59,765,607
JBrowse link
G Bcl2 BCL2, apoptosis regulator IEP RGD PMID:9813151 RGD:2315711 NCBI chr13:23,204,464...23,366,900
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743
JBrowse link
G Bcl2a1 BCL2-related protein A1 IEP RGD PMID:9813151 RGD:2315711 NCBI chr 8:89,716,914...89,724,998
Ensembl chr 8:89,716,914...89,724,998
JBrowse link
G Bcl2l1 Bcl2-like 1 IEP RGD PMID:9813151 RGD:2315711 NCBI chr 3:141,253,508...141,304,582
Ensembl chr 3:141,253,523...141,303,479
Ensembl chr 1:141,253,523...141,303,479
JBrowse link
G Bnip3 BCL2 interacting protein 3 IEP RGD PMID:16765336 RGD:11561980 NCBI chr 1:193,708,164...193,725,348
Ensembl chr 1:193,708,167...193,725,359
JBrowse link
G Btbd3 BTB domain containing 3 involved_in IBA
ISO
GO_REF:0000033
(PMID:24179155)
GO_Central
RGD
PMID:24179155 GO_REF:0000033 NCBI chr 3:125,591,427...125,621,660
Ensembl chr 3:125,591,490...125,619,038
JBrowse link
G Cacna1c calcium voltage-gated channel subunit alpha1 C IEP RGD PMID:22473424 RGD:10411906 NCBI chr 4:151,764,138...152,379,454
Ensembl chr 4:151,764,138...152,379,648
JBrowse link
G Cask calcium/calmodulin dependent serine protein kinase IEP RGD PMID:10749215 RGD:11576295 NCBI chr  X:8,899,500...9,243,014
Ensembl chr  X:8,899,833...9,238,694
JBrowse link
G Ccdc39 coiled-coil domain 39 molecular ruler complex subunit acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:34992132)
GO_REF:0000107
RGD
Ensembl
PMID:34992132 GO_REF:0000107 NCBI chr 2:116,665,651...116,703,354
Ensembl chr 2:116,665,261...116,703,350
JBrowse link
G Ccdc85c coiled-coil domain containing 85C involved_in ISO (PMID:22056358) RGD PMID:22056358 NCBI chr 6:127,113,440...127,184,328
Ensembl chr 6:127,113,442...127,184,371
JBrowse link
G Cdh2 cadherin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:95387 (PMID:25100583)
Ensembl
RGD
PMID:25100583 GO_REF:0000107 NCBI chr18:7,776,704...7,990,934
Ensembl chr18:7,776,704...7,990,167
JBrowse link
G Cdk5 cyclin-dependent kinase 5 acts_upstream_of_or_within ISO MGI:1861809 (PMID:9698328) RGD PMID:9698328 NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
JBrowse link
G Cdon cell adhesion associated, oncogene regulated involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2653120 (PMID:16648472)
Ensembl
RGD
PMID:16648472 GO_REF:0000107 NCBI chr 8:33,775,123...33,861,635
Ensembl chr 8:33,806,183...33,859,033
JBrowse link
G Celf1 CUGBP, Elav-like family member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:32245946)
Ensembl
RGD
PMID:32245946 GO_REF:0000107 NCBI chr 3:76,924,591...76,999,429
Ensembl chr 3:76,924,613...76,999,426
JBrowse link
G Cep120 centrosomal protein 120 acts_upstream_of_or_within ISO (PMID:17920017) RGD PMID:17920017 NCBI chr18:47,127,979...47,189,964
Ensembl chr18:47,127,981...47,189,964
JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (PMID:18179893), (PMID:18987363) RGD PMID:18179893 PMID:18987363 NCBI chr 4:74,109,455...76,366,434
Ensembl chr 4:74,109,472...76,362,027
JBrowse link
G Col3a1 collagen type III alpha 1 chain involved_in ISS
ISO
GO_REF:0000024
(PMID:21768377)
UniProt
RGD
PMID:21768377 GO_REF:0000024 NCBI chr 9:47,374,611...47,410,547
Ensembl chr 9:47,374,593...47,410,547
JBrowse link
G Crk CRK proto-oncogene, adaptor protein acts_upstream_of_or_within ISO MGI:104686 (PMID:19074029) RGD PMID:19074029 NCBI chr10:60,530,469...60,556,703
Ensembl chr10:60,530,464...60,553,406
JBrowse link
G Crkl CRK like proto-oncogene, adaptor protein acts_upstream_of_or_within ISO MGI:88508 (PMID:19074029) RGD PMID:19074029 NCBI chr11:83,528,788...83,563,214
Ensembl chr11:83,526,530...83,563,238
JBrowse link
G Crnkl1 crooked neck pre-mRNA splicing factor 1 IEP RGD PMID:12801913 RGD:634609 NCBI chr 3:133,338,593...133,354,329
Ensembl chr 3:133,337,039...133,354,302
Ensembl chr 6:133,337,039...133,354,302
JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 IEP RGD PMID:7735332 RGD:11565823 NCBI chr 3:140,709,984...140,756,757
Ensembl chr 3:140,709,991...140,756,696
JBrowse link
G Csnk2a2 casein kinase 2 alpha 2 IEP RGD PMID:7735332 RGD:11565823 NCBI chr19:9,556,443...9,596,080
Ensembl chr19:9,556,260...9,596,080
JBrowse link
G Dab1 DAB adaptor protein 1 IEP RGD PMID:20368265 RGD:2324624 NCBI chr 5:118,392,953...119,513,625
Ensembl chr 5:119,140,533...119,510,552
JBrowse link
G Dcc DCC netrin 1 receptor IEP RGD PMID:22473424 RGD:10411906 NCBI chr18:64,868,987...65,972,783
Ensembl chr18:64,873,898...65,972,740
JBrowse link
G Dicer1 dicer 1 ribonuclease III acts_upstream_of_or_within ISO MGI:3641051 (PMID:18997113) RGD PMID:18997113 NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 IEP RGD PMID:14597197 RGD:152975667 NCBI chr11:68,911,883...69,103,230
Ensembl chr11:68,911,883...69,102,689
JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 IEP RGD PMID:14597197 RGD:152975667 NCBI chr10:54,740,700...54,769,097
Ensembl chr10:54,739,470...54,767,153
JBrowse link
G Dmd dystrophin IEP RGD PMID:1454857 RGD:12880362 NCBI chr  X:47,272,324...49,504,219
Ensembl chr  X:47,272,331...49,504,207
JBrowse link
G Emx1 empty spiracles homeobox 1 acts_upstream_of_or_within ISO MGI:1314653|MGI:1928281|MGI:88355|MGI:95388 (PMID:12764040), (PMID:16892058), (PMID:25100583) RGD PMID:12764040 PMID:16892058 PMID:25100583 NCBI chr 4:117,725,148...117,741,616
Ensembl chr 4:117,725,155...117,741,613
JBrowse link
G Emx2 empty spiracles homeobox 2 acts_upstream_of_or_within ISO MGI:95387 (PMID:12764040) RGD PMID:12764040 NCBI chr 1:258,626,584...258,633,594
Ensembl chr 1:258,626,584...258,633,594
JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 IEP RGD PMID:18565716 RGD:13204724 NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715
JBrowse link
G Eomes eomesodermin involved_in ISO (PMID:30186101) RGD PMID:30186101 NCBI chr 8:118,181,340...118,189,186
Ensembl chr 8:118,181,777...118,188,316
JBrowse link
G Fat4 FAT atypical cadherin 4 involved_in ISO (PMID:19506035) RGD PMID:19506035 NCBI chr 2:121,927,266...122,056,700
Ensembl chr 2:121,927,942...122,056,707
JBrowse link
G Filip1 filamin A interacting protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:26655467)
GO_REF:0000107
RGD
Ensembl
PMID:26655467 GO_REF:0000107 NCBI chr 8:80,761,283...80,956,556
Ensembl chr 8:80,764,604...80,922,549
JBrowse link
G Fktn fukutin acts_upstream_of_or_within ISO (PMID:29360985) RGD PMID:29360985 NCBI chr 5:68,339,803...68,396,412
Ensembl chr 5:68,340,028...68,396,409
JBrowse link
G Flna filamin A IEP RGD PMID:22076441 RGD:11564351 NCBI chr  X:152,007,758...152,034,266
Ensembl chr  X:152,007,758...152,031,052
JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit IMP RGD PMID:32385110 RGD:405649740 NCBI chr 6:105,121,170...105,124,036
Ensembl chr 6:105,121,170...105,124,036
JBrowse link
G Foxg1 forkhead box G1 acts_upstream_of_or_within ISO (PMID:22726835) RGD PMID:22726835 NCBI chr 6:66,674,797...66,677,611
Ensembl chr 6:66,666,587...66,678,607
JBrowse link
G Foxp2 forkhead box P2 involved_in ISO
IEA
(PMID:18987363)
GO_REF:0000107
RGD
Ensembl
PMID:18987363 GO_REF:0000107 NCBI chr 4:43,133,827...43,712,442
Ensembl chr 4:43,133,912...43,711,683
JBrowse link
G Gart phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase IEP RGD PMID:7057182 RGD:2301991 NCBI chr11:30,864,896...30,891,125
Ensembl chr11:30,865,889...30,891,125
JBrowse link
G Gng12 G protein subunit gamma 12 IEP RGD PMID:9003074 RGD:2314446 NCBI chr 4:96,011,118...96,134,767
Ensembl chr 4:96,010,952...96,134,712
JBrowse link
G Gria1 glutamate ionotropic receptor AMPA type subunit 1 IEP RGD PMID:14597197 RGD:152975667 NCBI chr10:41,210,713...41,527,283
Ensembl chr10:41,210,713...41,527,283
JBrowse link
G Gria2 glutamate ionotropic receptor AMPA type subunit 2 IEP RGD PMID:14597197 RGD:152975667 NCBI chr 2:165,949,379...166,069,510
Ensembl chr 2:165,947,521...166,069,510
JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 acts_upstream_of_or_within ISO MGI:1928279|MGI:1928281|MGI:2655232|MGI:2655237 (PMID:10963597), (PMID:12657691) RGD PMID:10963597 PMID:12657691 NCBI chr 3:8,103,680...8,130,603
Ensembl chr 3:8,103,680...8,130,603
JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A IEP RGD PMID:19409459 RGD:2325985 NCBI chr10:5,629,683...6,053,262
Ensembl chr10:5,631,369...6,044,637
JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B IEP RGD PMID:19409459 RGD:2325985 NCBI chr 4:168,580,824...169,044,110
Ensembl chr 4:168,599,546...169,042,279
JBrowse link
G Grip1 glutamate receptor interacting protein 1 IEP RGD PMID:14597197 RGD:152975667 NCBI chr 7:54,934,856...55,592,274
Ensembl chr 7:54,934,250...55,592,273
JBrowse link
G H2ax H2A.X variant histone IEP RGD PMID:3622934 RGD:8693731 NCBI chr 8:44,671,907...44,673,262
Ensembl chr 8:44,671,786...44,673,239
Ensembl chr 4:44,671,786...44,673,239
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2677899 (PMID:12972594)
Ensembl
RGD
PMID:12972594 GO_REF:0000107 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K IEP
IDA
RGD PMID:22102872 PMID:18054780 RGD:10002783, RGD:10041004 NCBI chr17:6,262,936...6,275,001
Ensembl chr17:6,262,998...6,274,997
JBrowse link
G Kcna1 potassium voltage-gated channel subfamily A member 1 IEP RGD PMID:22473424 RGD:10411906 NCBI chr 4:159,464,223...159,472,905
Ensembl chr 4:159,464,188...159,472,682
JBrowse link
G Kcna2 potassium voltage-gated channel subfamily A member 2 IEP RGD PMID:22473424 RGD:10411906 NCBI chr 2:194,704,555...194,718,387
Ensembl chr 2:194,704,639...194,718,400
JBrowse link
G Kcnc4 potassium voltage-gated channel subfamily C member 4 IEP RGD PMID:22473424 RGD:10411906 NCBI chr 2:195,063,967...195,100,244
Ensembl chr 2:195,071,769...195,099,233
JBrowse link
G Kdm1a lysine demethylase 1A IEP RGD PMID:20164337 RGD:9588288 NCBI chr 5:148,782,976...148,838,319
Ensembl chr 5:148,782,976...148,838,319
JBrowse link
G Kif14 kinesin family member 14 involved_in ISO (PMID:23308235) RGD PMID:23308235 NCBI chr13:47,926,975...47,990,598
Ensembl chr13:47,927,044...47,989,164
JBrowse link
G Kif26a kinesin family member 26A involved_in ISO (PMID:36228617) RGD PMID:36228617 NCBI chr 6:131,214,839...131,250,874
Ensembl chr 6:131,214,861...131,250,320
JBrowse link
G Kif5a kinesin family member 5A IEP RGD PMID:9349526 RGD:12792964 NCBI chr 7:63,051,894...63,089,024
Ensembl chr 7:63,049,424...63,092,858
JBrowse link
G Lhx2 LIM homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:26371318), (PMID:28053041)
MGI:4399044 (PMID:19820705)
Ensembl
RGD
PMID:19820705 PMID:26371318 PMID:28053041 GO_REF:0000107 NCBI chr 3:22,113,619...22,143,909
Ensembl chr 3:22,126,007...22,143,908
JBrowse link
G Lrp1 LDL receptor related protein 1 IEP RGD PMID:8930375 RGD:10046019 NCBI chr 7:63,380,325...63,461,029
Ensembl chr 7:63,380,356...63,460,910
JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:2156191 (PMID:16920270) RGD PMID:16920270 NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497
JBrowse link
G Lrp8 LDL receptor related protein 8 IEP RGD PMID:20368265 RGD:2324624 NCBI chr 5:122,563,468...122,635,434
Ensembl chr 5:122,563,453...122,631,352
JBrowse link
G Mcph1 microcephalin 1 acts_upstream_of_or_within ISO MGI:5308745 (PMID:21947081) RGD PMID:21947081 NCBI chr16:71,021,855...71,224,067
Ensembl chr16:71,024,588...71,224,122
JBrowse link
G Mdk midkine involved_in IEA
ISO
GO_REF:0000107
(PMID:10096022)
Ensembl
RGD
PMID:10096022 GO_REF:0000107 NCBI chr 3:77,901,134...77,903,997
Ensembl chr 3:77,901,158...77,903,130
JBrowse link
G Mecp2 methyl CpG binding protein 2 IEP RGD PMID:14751287 RGD:12743658 NCBI chr  X:151,781,177...151,844,687
Ensembl chr  X:151,789,930...151,844,689
JBrowse link
G Mgarp mitochondria-localized glutamic acid-rich protein involved_in ISO (PMID:24323429) RGD PMID:24323429 NCBI chr 2:135,431,283...135,439,425
Ensembl chr 2:135,431,283...135,439,612
JBrowse link
G Mkks MKKS centrosomal shuttling protein acts_upstream_of_or_within ISO MGI:3526444 (PMID:18032602) RGD PMID:18032602 NCBI chr 3:124,201,877...124,221,142
Ensembl chr 3:124,201,877...124,220,162
JBrowse link
G Nars1 asparaginyl-tRNA synthetase 1 involved_in ISO (PMID:32788587) RGD PMID:32788587 NCBI chr18:57,989,308...58,005,584
Ensembl chr18:57,989,308...58,005,622
JBrowse link
G Ncoa1 nuclear receptor coactivator 1 IEP RGD PMID:12551846 RGD:5688241 NCBI chr 6:27,232,609...27,507,992
Ensembl chr 6:27,232,611...27,475,664
JBrowse link
G Nde1 nudE neurodevelopment protein 1 involved_in
acts_upstream_of_or_within
ISO
IEA
ISS
(PMID:21529752)
MGI:109520 (PMID:18469343)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:18469343 PMID:21529752 GO_REF:0000024 GO_REF:0000107 NCBI chr10:839,788...883,946
Ensembl chr10:839,788...883,869
JBrowse link
G Nefh neurofilament heavy chain IEP RGD PMID:10439464 RGD:9743942 NCBI chr14:79,830,362...79,840,347
Ensembl chr14:79,830,362...79,840,351
JBrowse link
G Nefl neurofilament light chain IEP RGD PMID:10439464 RGD:9743942 NCBI chr15:42,301,920...42,305,793
Ensembl chr15:42,301,916...42,305,793
JBrowse link
G Nefm neurofilament medium chain IEP RGD PMID:10439464 RGD:9743942 NCBI chr15:42,360,449...42,365,753
Ensembl chr15:42,360,454...42,365,755
JBrowse link
G Nf1 neurofibromin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
ISS
GO_REF:0000107
MGI:2176055|MGI:2176057 (PMID:11297510)
GO_REF:0000024
Ensembl
RGD
HGNC-UCL
PMID:11297510 GO_REF:0000024 GO_REF:0000107 NCBI chr10:64,306,027...64,539,112
Ensembl chr10:64,306,301...64,536,658
JBrowse link
G Nfix nuclear factor I X involved_in ISO MGI:3802571 (PMID:18477394) RGD PMID:18477394 NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265
JBrowse link
G Npy neuropeptide Y involved_in ISO
IEA
(PMID:9067840)
GO_REF:0000107
RGD
Ensembl
PMID:9067840 GO_REF:0000107 NCBI chr 4:78,881,294...78,888,495
Ensembl chr 4:78,881,264...78,888,495
JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within ISO MGI:2151350|MGI:2176490 (PMID:11997145), (PMID:12527005), (PMID:15950290), (PMID:16000615) RGD PMID:11997145 PMID:12527005 PMID:15950290 PMID:16000615 NCBI chr20:46,050,134...46,071,257
Ensembl chr20:46,050,414...46,073,949
JBrowse link
G Nr4a2 nuclear receptor subfamily 4, group A, member 2 IEP RGD PMID:21056632 RGD:124713572 NCBI chr 3:41,689,847...41,707,036
Ensembl chr 3:41,689,851...41,697,877
JBrowse link
G Nsun5 NOP2/Sun RNA methyltransferase 5 involved_in ISO (PMID:31462248) RGD PMID:31462248 NCBI chr12:21,293,637...21,299,319
Ensembl chr12:21,293,645...21,299,272
JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:15372074)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:15372074 GO_REF:0000024 GO_REF:0000107 NCBI chr17:5,558,992...5,870,299
Ensembl chr17:5,559,043...5,869,136
JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 involved_in
acts_upstream_of_or_within
ISO (PMID:9063735)
MGI:1914453|MGI:2387783 (PMID:11344260), (PMID:18469343)
RGD PMID:9063735 PMID:11344260 PMID:18469343 NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808
JBrowse link
G Pals1 protein associated with LIN7 1, MAGUK p55 family member involved_in ISS
ISO
GO_REF:0000024
(PMID:20399730)
UniProt
RGD
PMID:20399730 GO_REF:0000024 NCBI chr 6:97,548,133...97,654,163
Ensembl chr 6:97,548,630...97,653,305
JBrowse link
G Pax5 paired box 5 acts_upstream_of_or_within ISO MGI:2386577 (PMID:23349049) RGD PMID:23349049 NCBI chr 5:58,763,334...58,945,719
Ensembl chr 5:58,765,036...58,944,326
JBrowse link
G Pax6 paired box 6 involved_in ISO (PMID:30186101) RGD PMID:30186101 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
JBrowse link
G Phactr1 phosphatase and actin regulator 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:30256902)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:30256902 GO_REF:0000024 GO_REF:0000107 NCBI chr17:21,560,364...22,040,166
Ensembl chr17:21,562,721...22,039,831
JBrowse link
G Plcb1 phospholipase C beta 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:11224545)
GO_REF:0000107
BHF-UCL
RGD
Ensembl
PMID:11224545 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:122,059,988...122,772,896
Ensembl chr 3:122,060,031...122,772,869
JBrowse link
G Ppp1r9b protein phosphatase 1, regulatory subunit 9B IEP RGD PMID:9275233 RGD:625590 NCBI chr10:79,938,055...79,954,085
Ensembl chr10:79,938,066...79,954,083
JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO MGI:1857974 (PMID:16079160) RGD PMID:16079160 NCBI chr 6:103,323,052...103,375,088
Ensembl chr 6:103,323,120...103,371,650
JBrowse link
G Ptprs protein tyrosine phosphatase, receptor type, S involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2158734 (PMID:15842738)
Ensembl
RGD
PMID:15842738 GO_REF:0000107 NCBI chr 9:1,245,408...1,307,015
Ensembl chr 9:1,245,410...1,306,947
JBrowse link
G Reln reelin acts_upstream_of_or_within IEP
ISO
MGI:1856398 (PMID:21491433) RGD PMID:21491433 PMID:10436054 RGD:634730 NCBI chr 4:12,736,177...13,162,956
Ensembl chr 4:12,736,130...13,162,211
JBrowse link
G Scn2a sodium voltage-gated channel alpha subunit 2 IEP RGD PMID:22473424 RGD:10411906 NCBI chr 3:70,710,862...70,845,569
Ensembl chr 3:50,302,877...50,437,214
JBrowse link
G Slc2a1 solute carrier family 2 member 1 IEP RGD PMID:16581179 RGD:12879481 NCBI chr 5:132,717,196...132,745,416
Ensembl chr 5:132,717,196...132,745,416
JBrowse link
G Slc2a3 solute carrier family 2 member 3 IEP RGD PMID:16581179 RGD:12879481 NCBI chr 4:155,960,944...156,026,000
Ensembl chr 4:155,960,946...156,025,472
JBrowse link
G Slc38a2 solute carrier family 38, member 2 IEP RGD PMID:21718781 RGD:9999217 NCBI chr 7:127,851,267...127,863,482
Ensembl chr 7:127,851,267...127,863,436
JBrowse link
G Smo smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2176256 (PMID:23680462)
Ensembl
RGD
PMID:23680462 GO_REF:0000107 NCBI chr 4:58,343,626...58,373,823
Ensembl chr 4:58,343,529...58,373,829
JBrowse link
G Sox2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO MGI:2181440|MGI:3052123 (PMID:15240551) RGD PMID:15240551 NCBI chr 2:117,536,929...117,539,340
Ensembl chr 2:117,536,929...117,539,338
JBrowse link
G Srd5a1 steroid 5 alpha-reductase 1 IEP RGD PMID:8770891 RGD:4892048 NCBI chr 1:33,686,069...33,720,468
Ensembl chr 1:33,686,391...33,720,461
JBrowse link
G Tacc1 transforming, acidic coiled-coil containing protein 1 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:17920017)
GO_Central
RGD
PMID:17920017 GO_REF:0000033 NCBI chr16:66,812,232...66,895,736
Ensembl chr16:66,812,295...66,895,733
JBrowse link
G Tacc2 transforming, acidic coiled-coil containing protein 2 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:17920017)
GO_Central
RGD
PMID:17920017 GO_REF:0000033 NCBI chr 1:185,139,223...185,327,881
Ensembl chr 1:185,116,111...185,327,881
JBrowse link
G Tacc3 transforming, acidic coiled-coil containing protein 3 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:17920017)
GO_Central
RGD
PMID:17920017 GO_REF:0000033 NCBI chr14:77,051,209...77,065,343
Ensembl chr14:77,051,215...77,065,219
JBrowse link
G Tbr1 T-box brain transcription factor 1 involved_in IEP
ISO
(PMID:30186101) RGD PMID:30186101 PMID:10749215 RGD:11576295 NCBI chr 3:46,350,237...46,368,397
Ensembl chr 3:46,351,213...46,361,041
JBrowse link
G Tfap2c transcription factor AP-2 gamma acts_upstream_of_or_within ISO MGI:2176695 (PMID:19749747) RGD PMID:19749747 NCBI chr 3:161,315,114...161,322,998
Ensembl chr 3:161,315,031...161,322,995
JBrowse link
G Th tyrosine hydroxylase IEP RGD PMID:21295554 RGD:5128671 NCBI chr 1:198,071,500...198,078,832
Ensembl chr 1:198,071,503...198,109,767
JBrowse link
G Trappc9 trafficking protein particle complex subunit 9 involved_in ISO (PMID:20004763) RGD PMID:20004763 NCBI chr 7:104,521,593...104,998,352
Ensembl chr 7:104,521,593...104,998,352
JBrowse link
G Tsc1 TSC complex subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2176055|MGI:2656240 (PMID:17522300)
Ensembl
RGD
PMID:17522300 GO_REF:0000107 NCBI chr 3:11,969,547...12,018,591
Ensembl chr 3:11,979,729...12,015,674
JBrowse link
G Tuba1a tubulin, alpha 1A involved_in ISO MGI:5308811|MGI:6506267 (PMID:22101068), (PMID:31386652) RGD PMID:22101068 PMID:31386652 NCBI chr 7:130,113,214...130,116,880
Ensembl chr 7:130,081,032...130,196,186
JBrowse link
G Tubb2a tubulin, beta 2A class IIa involved_in IEA
ISO
GO_REF:0000107
MGI:6506264 (PMID:31386652)
Ensembl
RGD
PMID:31386652 GO_REF:0000107 NCBI chr17:30,796,842...30,800,713
Ensembl chr17:30,747,503...30,800,714
JBrowse link
G Tubb2b tubulin, beta 2B class IIb involved_in IEA
ISO
GO_REF:0000107
MGI:6506266 (PMID:31386652)
Ensembl
RGD
PMID:31386652 GO_REF:0000107 NCBI chr17:30,747,734...30,750,781
Ensembl chr17:30,747,734...30,750,638
JBrowse link
G Ulk4 unc-51 like kinase 4 acts_upstream_of_or_within ISO (PMID:34235142) RGD PMID:34235142 NCBI chr 8:120,670,879...120,966,026
Ensembl chr 8:120,670,866...120,966,924
JBrowse link
G Vldlr very low density lipoprotein receptor IEP RGD PMID:20368265 RGD:2324624 NCBI chr 1:224,813,539...224,850,400
Ensembl chr 1:224,814,377...224,845,920
JBrowse link
G Wdr47 WD repeat domain 47 acts_upstream_of_or_within ISO MGI:4433065|MGI:6102912 (PMID:29078390) RGD PMID:29078390 NCBI chr 2:196,226,757...196,287,739
Ensembl chr 2:196,205,238...196,287,739
JBrowse link
G Wdr62 WD repeat domain 62 involved_in ISO (PMID:20729831) RGD PMID:20729831 NCBI chr 1:85,491,531...85,530,643
Ensembl chr 1:85,491,533...85,530,637
JBrowse link
G Xab2 XPA binding protein 2 IEP RGD PMID:12801913 RGD:634609 NCBI chr12:1,667,672...1,679,702
Ensembl chr12:1,667,672...1,679,692
JBrowse link
G Ywhae tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2667341 (PMID:12796778)
Ensembl
RGD
PMID:12796778 GO_REF:0000107 NCBI chr10:60,584,665...60,622,352
Ensembl chr10:60,584,652...60,671,589
JBrowse link
G Zbtb18 zinc finger and BTB domain containing 18 acts_upstream_of_or_within ISO MGI:3851929 (PMID:19409883) RGD PMID:19409883 NCBI chr13:89,439,501...89,447,958
Ensembl chr13:89,439,420...89,448,862
JBrowse link
cerebral cortex GABAergic interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arx aristaless related homeobox involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2679972 (PMID:17460091)
Ensembl
RGD
PMID:17460091 GO_REF:0000107 NCBI chr  X:58,016,233...58,028,149
Ensembl chr  X:58,016,233...58,028,142
JBrowse link
G Cntn2 contactin 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:11714688)
GO_REF:0000107
RGD
Ensembl
PMID:11714688 GO_REF:0000107 NCBI chr13:43,942,868...43,975,973
Ensembl chr13:43,947,265...43,975,887
JBrowse link
G Drd1 dopamine receptor D1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857875 (PMID:17409246)
Ensembl
RGD
PMID:17409246 GO_REF:0000107 NCBI chr17:10,540,440...10,544,971
Ensembl chr17:10,540,558...10,545,002
JBrowse link
G Drd2 dopamine receptor D2 acts_upstream_of_or_within ISO MGI:1857875 (PMID:17409246) RGD PMID:17409246 NCBI chr 8:58,605,403...58,669,339
Ensembl chr 8:49,708,927...49,772,875
JBrowse link
G Fezf2 Fez family zinc finger 2 acts_upstream_of_or_within ISO MGI:3046867 (PMID:21338885) RGD PMID:21338885 NCBI chr15:12,768,614...12,777,554
Ensembl chr15:12,773,762...12,777,554
JBrowse link
G Lhx6 LIM homeobox 6 acts_upstream_of_or_within ISO MGI:3702518 (PMID:17376969) RGD PMID:17376969 NCBI chr 3:19,432,439...19,456,268
Ensembl chr 3:19,433,494...19,456,061
JBrowse link
cerebral cortex radial glia-guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrg1 adhesion G protein-coupled receptor G1 involved_in ISS
ISO
GO_REF:0000024
(PMID:18509043)
UniProt
RGD
PMID:18509043 GO_REF:0000024 NCBI chr19:10,003,963...10,041,122
Ensembl chr19:10,003,975...10,041,108
JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856282 (PMID:9232833) RGD PMID:9232833 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
JBrowse link
G P2ry12 purinergic receptor P2Y12 involved_in IMP PMID:18183622
PMID:17299767
ARUK-UCL PMID:18183622 PMID:17299767 RGD:13673786, RGD:13673751 NCBI chr 2:143,481,468...143,523,340
Ensembl chr 2:143,481,430...143,523,361
JBrowse link
G Rtn4 reticulon 4 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:20093372)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:20093372 GO_REF:0000024 GO_REF:0000107 NCBI chr14:103,450,074...103,497,687
Ensembl chr14:103,449,930...103,497,686
JBrowse link
G Wdr47 WD repeat domain 47 acts_upstream_of_or_within ISO MGI:6102912 (PMID:29078390) RGD PMID:29078390 NCBI chr 2:196,226,757...196,287,739
Ensembl chr 2:196,205,238...196,287,739
JBrowse link
cerebral cortex radially oriented cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc141 coiled-coil domain containing 141 acts_upstream_of_or_within ISO (PMID:20956536) RGD PMID:20956536 NCBI chr 3:61,948,614...62,109,968
Ensembl chr 3:61,948,646...62,110,079
JBrowse link
G Cdk5r1 cyclin-dependent kinase 5 regulatory subunit 1 involved_in ISO (PMID:20624590) RGD PMID:20624590 NCBI chr10:65,484,266...65,485,467
Ensembl chr10:65,483,941...65,488,456
JBrowse link
G Cul5 cullin 5 acts_upstream_of_or_within ISO (PMID:24210661) RGD PMID:24210661 NCBI chr 8:54,012,963...54,066,751
Ensembl chr 8:54,016,006...54,066,666
JBrowse link
G Dab1 DAB adaptor protein 1 involved_in
acts_upstream_of_or_within
IMP
ISO
(PMID:9338784)
MGI:1337096|MGI:1861918 (PMID:24210661), (PMID:9338785)
RGD PMID:9338784 PMID:9338785 PMID:24210661 PMID:18160654 RGD:2324689 NCBI chr 5:118,392,953...119,513,625
Ensembl chr 5:119,140,533...119,510,552
JBrowse link
G Disc1 DISC1 scaffold protein involved_in ISO (PMID:20624590) RGD PMID:20624590 NCBI chr19:53,014,201...53,223,617
Ensembl chr19:53,014,616...53,219,778
JBrowse link
G Dixdc1 DIX domain containing 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:20624590)
Ensembl
RGD
PMID:20624590 GO_REF:0000107 NCBI chr 8:51,007,835...51,081,191
Ensembl chr 8:51,007,838...51,081,090
JBrowse link
G Fbxo45 F-box protein 45 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3849742 (PMID:19398581)
Ensembl
RGD
PMID:19398581 GO_REF:0000107 NCBI chr11:68,551,430...68,567,053
Ensembl chr11:68,551,122...68,566,800
JBrowse link
G Fut10 fucosyltransferase 10 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:23986452)
Ensembl
RGD
PMID:23986452 GO_REF:0000107 NCBI chr16:60,868,761...60,958,762
Ensembl chr16:60,877,952...60,958,683
JBrowse link
G Lhx6 LIM homeobox 6 acts_upstream_of_or_within ISO MGI:3702518 (PMID:17376969) RGD PMID:17376969 NCBI chr 3:19,432,439...19,456,268
Ensembl chr 3:19,433,494...19,456,061
JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4878863 (PMID:21104742)
Ensembl
RGD
PMID:21104742 GO_REF:0000107 NCBI chr20:7,900,327...7,964,309
Ensembl chr20:7,904,358...7,963,471
JBrowse link
G Ndel1 nudE neurodevelopment protein 1-like 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:20624590)
Ensembl
RGD
PMID:20624590 GO_REF:0000107 NCBI chr10:53,505,628...53,582,025
Ensembl chr10:53,516,491...53,570,907
JBrowse link
G Pou3f2 POU class 3 homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:102564 (PMID:12130536)
Ensembl
RGD
PMID:12130536 GO_REF:0000107 NCBI chr 5:36,077,930...36,083,838
Ensembl chr 5:36,077,930...36,083,838
JBrowse link
G Pou3f3 POU class 3 homeobox 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:101895 (PMID:12130536)
Ensembl
RGD
PMID:12130536 GO_REF:0000107 NCBI chr 9:44,945,872...44,948,998
Ensembl chr 9:44,945,872...44,948,992
JBrowse link
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within ISO MGI:1932522|MGI:2663662 (PMID:17409253) RGD PMID:17409253 NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251
JBrowse link
G Rnf7 ring finger protein 7 acts_upstream_of_or_within ISO MGI:108554 (PMID:24210661) RGD PMID:24210661 NCBI chr 8:97,038,845...97,048,080
Ensembl chr 8:97,038,840...97,047,824
JBrowse link
G Socs7 suppressor of cytokine signaling 7 acts_upstream_of_or_within ISO (PMID:24210661) RGD PMID:24210661 NCBI chr10:82,352,159...82,388,829
Ensembl chr10:82,351,680...82,388,830
JBrowse link
cerebral cortex regionalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrg1 adhesion G protein-coupled receptor G1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:24531968)
Ensembl
RGD
PMID:24531968 GO_REF:0000107 NCBI chr19:10,003,963...10,041,122
Ensembl chr19:10,003,975...10,041,108
JBrowse link
G Bhlhe22 basic helix-loop-helix family, member e22 acts_upstream_of_or_within ISO MGI:3707409 (PMID:23431145) RGD PMID:23431145 NCBI chr 2:100,486,400...100,489,510
Ensembl chr 2:100,486,400...100,489,510
JBrowse link
G Dmrta2 DMRT-like family A2 acts_upstream_of_or_within ISO MGI:5527461 (PMID:22923088), (PMID:23056351) RGD PMID:22923088 PMID:23056351 NCBI chr 5:124,805,883...124,811,694
Ensembl chr 5:124,805,883...124,811,630
JBrowse link
G Emx1 empty spiracles homeobox 1 acts_upstream_of_or_within ISO MGI:95388 (PMID:15147765) RGD PMID:15147765 NCBI chr 4:117,725,148...117,741,616
Ensembl chr 4:117,725,155...117,741,613
JBrowse link
G Emx2 empty spiracles homeobox 2 acts_upstream_of_or_within ISO MGI:2148858|MGI:95387 (PMID:12764040), (PMID:15147765) RGD PMID:12764040 PMID:15147765 NCBI chr 1:258,626,584...258,633,594
Ensembl chr 1:258,626,584...258,633,594
JBrowse link
G Eomes eomesodermin involved_in
acts_upstream_of_or_within
ISO (PMID:30186101)
MGI:2176173|MGI:3802572 (PMID:23431145)
RGD PMID:23431145 PMID:30186101 NCBI chr 8:118,181,340...118,189,186
Ensembl chr 8:118,181,777...118,188,316
JBrowse link
G Nr2f1 nuclear receptor subfamily 2, group F, member 1 acts_upstream_of_or_within ISO MGI:3521756 (PMID:17828260) RGD PMID:17828260 NCBI chr 2:8,040,375...8,050,123
Ensembl chr 2:8,040,377...8,050,123
JBrowse link
G Pax6 paired box 6 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:30186101)
MGI:1856155 (PMID:12764040), (PMID:23431145)
Ensembl
RGD
PMID:12764040 PMID:23431145 PMID:30186101 GO_REF:0000107 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
JBrowse link
G Tra2b transformer 2 beta involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2176173|MGI:4450919 (PMID:24586484)
Ensembl
RGD
PMID:24586484 GO_REF:0000107 NCBI chr11:78,788,880...78,807,252
Ensembl chr11:78,788,884...78,807,249
JBrowse link
cerebral cortex tangential migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arx aristaless related homeobox involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2679972 (PMID:17460091)
Ensembl
RGD
PMID:17460091 GO_REF:0000107 NCBI chr  X:58,016,233...58,028,149
Ensembl chr  X:58,016,233...58,028,142
JBrowse link
G Fbxo45 F-box protein 45 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3849742 (PMID:19398581)
Ensembl
RGD
PMID:19398581 GO_REF:0000107 NCBI chr11:68,551,430...68,567,053
Ensembl chr11:68,551,122...68,566,800
JBrowse link
G Lhx6 LIM homeobox 6 acts_upstream_of_or_within ISO MGI:3702518 (PMID:17376969) RGD PMID:17376969 NCBI chr 3:19,432,439...19,456,268
Ensembl chr 3:19,433,494...19,456,061
JBrowse link
G Reln reelin involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
GO_REF:0000024
MGI:1856398 (PMID:16901480)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:16901480 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:12,736,177...13,162,956
Ensembl chr 4:12,736,130...13,162,211
JBrowse link
chemorepulsion involved in embryonic olfactory bulb interneuron precursor migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slit1 slit guidance ligand 1 NOT|involved_in ISO (PMID:11748139) RGD PMID:11748139 NCBI chr 1:240,409,559...240,558,127
Ensembl chr 1:240,409,561...240,558,127
JBrowse link
G Slit2 slit guidance ligand 2 NOT|involved_in ISO (PMID:11748139) RGD PMID:11748139 NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
JBrowse link
G Slit3 slit guidance ligand 3 NOT|involved_in ISO (PMID:11748139) RGD PMID:11748139 NCBI chr10:19,571,798...20,156,634
Ensembl chr10:19,571,684...20,156,634
JBrowse link
chemorepulsion involved in interneuron migration from the subpallium to the cortex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nrg1 neuregulin 1 acts_upstream_of_or_within ISO (PMID:22376909) RGD PMID:22376909 NCBI chr16:59,250,658...60,304,519
Ensembl chr16:59,250,854...60,296,884
JBrowse link
G Nrg3 neuregulin 3 acts_upstream_of_or_within ISO (PMID:22376909) RGD PMID:22376909 NCBI chr16:14,229,270...15,352,505
Ensembl chr16:14,235,157...15,352,368
JBrowse link
chemorepulsion involved in postnatal olfactory bulb interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Robo1 roundabout guidance receptor 1 involved_in ISO (PMID:15207848) RGD PMID:15207848 NCBI chr11:10,580,863...11,621,675
Ensembl chr11:10,580,908...11,620,203
JBrowse link
G Slit2 slit guidance ligand 2 involved_in ISO
IEA
(PMID:15207848)
GO_REF:0000107
RGD
Ensembl
PMID:15207848 GO_REF:0000107 NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
JBrowse link
corpus callosum development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg16l1 autophagy related 16-like 1 acts_upstream_of_or_within ISO MGI:4432181 (PMID:29078390) RGD PMID:29078390 NCBI chr 9:88,420,737...88,457,530
Ensembl chr 9:88,422,038...88,457,529
JBrowse link
G Cacna1c calcium voltage-gated channel subunit alpha1 C IEP RGD PMID:22473424 RGD:10411906 NCBI chr 4:151,764,138...152,379,454
Ensembl chr 4:151,764,138...152,379,648
JBrowse link
G Cdk5 cyclin-dependent kinase 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1928281|MGI:3043819 (PMID:18032654)
Ensembl
RGD
PMID:18032654 GO_REF:0000107 NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
JBrowse link
G Coro1c coronin 1C acts_upstream_of_or_within ISO MGI:4419168 (PMID:29078390) RGD PMID:29078390 NCBI chr12:42,713,024...42,785,179
Ensembl chr12:42,712,991...42,785,179
JBrowse link
G Dcc DCC netrin 1 receptor IEP RGD PMID:22473424 RGD:10411906 NCBI chr18:64,868,987...65,972,783
Ensembl chr18:64,873,898...65,972,740
JBrowse link
G Dmxl2 Dmx-like 2 acts_upstream_of_or_within ISO MGI:4432280 (PMID:29078390) RGD PMID:29078390 NCBI chr 8:54,741,164...54,884,948
Ensembl chr 8:54,741,160...54,885,161
JBrowse link
G Ephb2 Eph receptor B2 involved_in ISO (PMID:8947026) RGD PMID:8947026 NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059
JBrowse link
G Ephb3 Eph receptor B3 involved_in ISO (PMID:8947026) RGD PMID:8947026 NCBI chr11:79,840,668...79,859,345
Ensembl chr11:79,840,668...79,859,370
JBrowse link
G Filip1 filamin A interacting protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:26655467)
GO_REF:0000107
RGD
Ensembl
PMID:26655467 GO_REF:0000107 NCBI chr 8:80,761,283...80,956,556
Ensembl chr 8:80,764,604...80,922,549
JBrowse link
G Herc1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 acts_upstream_of_or_within ISO MGI:6102914 (PMID:29078390) RGD PMID:29078390 NCBI chr 8:66,857,169...67,070,318
Ensembl chr 8:66,856,935...67,070,312
JBrowse link
G Kcna1 potassium voltage-gated channel subfamily A member 1 IEP RGD PMID:22473424 RGD:10411906 NCBI chr 4:159,464,223...159,472,905
Ensembl chr 4:159,464,188...159,472,682
JBrowse link
G Kcna2 potassium voltage-gated channel subfamily A member 2 IEP RGD PMID:22473424 RGD:10411906 NCBI chr 2:194,704,555...194,718,387
Ensembl chr 2:194,704,639...194,718,400
JBrowse link
G Kcna3 potassium voltage-gated channel subfamily A member 3 IEP RGD PMID:22473424 RGD:10411906 NCBI chr 2:194,632,106...194,634,059
Ensembl chr 2:194,632,196...194,650,138
JBrowse link
G Kcnc1 potassium voltage-gated channel subfamily C member 1 IEP RGD PMID:22473424 RGD:10411906 NCBI chr 1:96,902,953...96,944,744
Ensembl chr 1:96,902,953...96,944,744
JBrowse link
G Kcnc3 potassium voltage-gated channel subfamily C member 3 IEP RGD PMID:22473424 RGD:10411906 NCBI chr 1:95,080,960...95,095,165
Ensembl chr 1:95,080,960...95,095,160
JBrowse link
G Kcnc4 potassium voltage-gated channel subfamily C member 4 IEP RGD PMID:22473424 RGD:10411906 NCBI chr 2:195,063,967...195,100,244
Ensembl chr 2:195,071,769...195,099,233
JBrowse link
G Kif21b kinesin family member 21B acts_upstream_of_or_within ISO MGI:4364527 (PMID:29078390) RGD PMID:29078390 NCBI chr13:47,576,129...47,626,112
Ensembl chr13:47,576,160...47,626,127
JBrowse link
G Lpar1 lysophosphatidic acid receptor 1 IEP RGD PMID:9753172 RGD:2317716 NCBI chr 5:73,229,047...73,347,874
Ensembl chr 5:73,229,625...73,369,895
JBrowse link
G Nsun5 NOP2/Sun RNA methyltransferase 5 involved_in ISO (PMID:31174389) RGD PMID:31174389 NCBI chr12:21,293,637...21,299,319
Ensembl chr12:21,293,645...21,299,272
JBrowse link
G Ptprs protein tyrosine phosphatase, receptor type, S involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2158734 (PMID:15842738)
Ensembl
RGD
PMID:15842738 GO_REF:0000107 NCBI chr 9:1,245,408...1,307,015
Ensembl chr 9:1,245,410...1,306,947
JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within ISO MGI:3716208 (PMID:17558409) RGD PMID:17558409 NCBI chr19:15,692,189...15,785,083
Ensembl chr19:15,692,150...15,785,083
JBrowse link
G Rtn4r reticulon 4 receptor involved_in ISS
ISO
GO_REF:0000024
(PMID:27339102)
UniProt
RGD
PMID:27339102 GO_REF:0000024 NCBI chr11:82,844,309...82,869,251
Ensembl chr11:82,844,309...82,869,466
JBrowse link
G Rtn4rl1 reticulon 4 receptor-like 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:27339102)
Ensembl
RGD
PMID:27339102 GO_REF:0000107 NCBI chr10:60,043,246...60,116,977
Ensembl chr10:60,043,002...60,116,978
JBrowse link
G Rtn4rl2 reticulon 4 receptor-like 2 involved_in ISO (PMID:27339102) RGD PMID:27339102 NCBI chr 3:69,954,557...69,971,108
Ensembl chr 3:69,955,169...69,971,488
JBrowse link
G Ryk receptor-like tyrosine kinase involved_in ISS
ISO
GO_REF:0000024
(PMID:16723543)
UniProt
RGD
PMID:16723543 GO_REF:0000024 NCBI chr 8:103,419,338...103,492,083
Ensembl chr 8:103,419,275...103,491,698
JBrowse link
G Scn2a sodium voltage-gated channel alpha subunit 2 IEP RGD PMID:22473424 RGD:10411906 NCBI chr 3:70,710,862...70,845,569
Ensembl chr 3:50,302,877...50,437,214
JBrowse link
G Ulk4 unc-51 like kinase 4 acts_upstream_of_or_within ISO MGI:4362969 (PMID:24284070) RGD PMID:24284070 NCBI chr 8:120,670,879...120,966,026
Ensembl chr 8:120,670,866...120,966,924
JBrowse link
G Wdr37 WD repeat domain 37 acts_upstream_of_or_within ISO MGI:4452651 (PMID:29078390) RGD PMID:29078390 NCBI chr17:61,637,258...61,703,677
Ensembl chr17:61,637,258...61,703,677
JBrowse link
G Wdr47 WD repeat domain 47 acts_upstream_of_or_within ISO MGI:4433065 (PMID:29078390) RGD PMID:29078390 NCBI chr 2:196,226,757...196,287,739
Ensembl chr 2:196,205,238...196,287,739
JBrowse link
G Wdr89 WD repeat domain 89 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4944354 (PMID:29078390)
Ensembl
RGD
PMID:29078390 GO_REF:0000107 NCBI chr 6:94,350,468...94,382,085
Ensembl chr 6:94,350,303...94,382,026
JBrowse link
corpus callosum morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family, member e22 acts_upstream_of_or_within ISO MGI:2684610|MGI:4440742|MGI:4440744 (PMID:22284184) RGD PMID:22284184 NCBI chr 2:100,486,400...100,489,510
Ensembl chr 2:100,486,400...100,489,510
JBrowse link
G Grcc10 gene rich cluster, C10 gene involved_in ISO (PMID:23453665), (PMID:23453666), (PMID:23633300), (PMID:24798461) RGD PMID:23453665 PMID:23453666 PMID:23633300 PMID:24798461 NCBI chr 4:157,551,276...157,552,924 JBrowse link
G Nin ninein acts_upstream_of_or_within ISO MGI:1344407 (PMID:25741725) RGD PMID:25741725 NCBI chr 6:88,525,405...88,627,710
Ensembl chr 6:88,525,742...88,627,639
JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 involved_in ISO (PMID:9063735) RGD PMID:9063735 NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808
JBrowse link
G Prdm8 PR/SET domain 8 acts_upstream_of_or_within ISO MGI:5315763 (PMID:22284184) RGD PMID:22284184 NCBI chr14:11,403,202...11,424,059
Ensembl chr14:11,404,407...11,410,993
JBrowse link
G Szt2 SZT2 subunit of KICSTOR complex involved_in ISO (PMID:23932106) RGD PMID:23932106 NCBI chr 5:131,897,250...131,943,953
Ensembl chr 5:131,897,275...131,943,904
JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4867728 (PMID:21055390)
Ensembl
RGD
PMID:21055390 GO_REF:0000107 NCBI chr 1:152,660,259...152,671,682
Ensembl chr 1:152,656,693...152,672,588
JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO MGI:2387499|MGI:2668659 (PMID:25741725) RGD PMID:25741725 NCBI chr 3:29,214,581...29,344,890
Ensembl chr 3:29,218,301...29,345,157
JBrowse link
dentate gyrus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atat1 alpha tubulin acetyltransferase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4453011 (PMID:23720746)
Ensembl
RGD
PMID:23720746 GO_REF:0000107 NCBI chr20:2,844,595...2,857,809
Ensembl chr20:2,844,616...2,861,964
JBrowse link
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 acts_upstream_of_or_within ISO MGI:1856982 (PMID:30498428) RGD PMID:30498428 NCBI chr 3:109,816,397...109,826,528
Ensembl chr 3:109,816,366...109,828,308
JBrowse link
G Btg2 BTG anti-proliferation factor 2 acts_upstream_of_or_within ISO MGI:3525505 (PMID:20020054) RGD PMID:20020054 NCBI chr13:45,531,881...45,535,642
Ensembl chr13:45,531,925...45,535,628
JBrowse link
G Csf1r colony stimulating factor 1 receptor IMP RGD PMID:33450391 RGD:126781687 NCBI chr18:54,546,673...54,590,418
Ensembl chr18:54,546,659...54,590,415
JBrowse link
G Drd1 dopamine receptor D1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2181426|MGI:3707260 (PMID:17360497)
Ensembl
RGD
PMID:17360497 GO_REF:0000107 NCBI chr17:10,540,440...10,544,971
Ensembl chr17:10,540,558...10,545,002
JBrowse link
G Emx2 empty spiracles homeobox 2 acts_upstream_of_or_within ISO MGI:2148858 (PMID:10729342) RGD PMID:10729342 NCBI chr 1:258,626,584...258,633,594
Ensembl chr 1:258,626,584...258,633,594
JBrowse link
G Fbxo41 F-box protein 41 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:35372812)
GO_REF:0000107
RGD
Ensembl
PMID:35372812 GO_REF:0000107 NCBI chr 4:118,007,517...118,039,547
Ensembl chr 4:118,010,978...118,039,406
JBrowse link
G Fezf2 Fez family zinc finger 2 acts_upstream_of_or_within ISO MGI:3046867 (PMID:16971467) RGD PMID:16971467 NCBI chr15:12,768,614...12,777,554
Ensembl chr15:12,773,762...12,777,554
JBrowse link
G Fxr1 FMR1 autosomal homolog 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:28204491)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:28204491 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:116,884,167...116,937,590
Ensembl chr 2:116,884,248...116,937,590
JBrowse link
G Fxr2 FMR1 autosomal homolog 2 involved_in ISO (PMID:21658585) RGD PMID:21658585 NCBI chr10:54,350,577...54,370,964
Ensembl chr10:54,350,131...54,370,964
JBrowse link
G Kcnq2 potassium voltage-gated channel subfamily Q member 2 acts_upstream_of_or_within ISO MGI:98248 (PMID:16464983) RGD PMID:16464983 NCBI chr 3:168,194,776...168,253,831
Ensembl chr 3:168,195,357...168,275,071
JBrowse link
G Kif3a kinesin family member 3a acts_upstream_of_or_within ISO MGI:2179048|MGI:2386464 (PMID:18297065) RGD PMID:18297065 NCBI chr10:37,725,930...37,761,183
Ensembl chr10:37,725,970...37,759,191
JBrowse link
G Large1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO MGI:1856965 (PMID:21970971) RGD PMID:21970971 NCBI chr19:11,603,129...12,048,930
Ensembl chr19:11,603,129...12,048,930
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1933764 (PMID:10631168)
Ensembl
RGD
PMID:10631168 GO_REF:0000107 NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794
JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha acts_upstream_of_or_within ISO MGI:1888413 (PMID:1638738) RGD PMID:1638738 NCBI chr13:79,834,614...79,978,253
Ensembl chr13:79,835,019...79,978,253
JBrowse link
G Mdk midkine involved_in IEA
ISO
GO_REF:0000107
(PMID:10096022)
Ensembl
RGD
PMID:10096022 GO_REF:0000107 NCBI chr 3:77,901,134...77,903,997
Ensembl chr 3:77,901,158...77,903,130
JBrowse link
G Mef2c myocyte enhancer factor 2C IEP RGD PMID:18949272 RGD:5131610 NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
JBrowse link
G Neurod1 neuronal differentiation 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(PMID:10398678), (PMID:10639171)
MGI:106593 (PMID:10804213)
UniProt
RGD
PMID:10398678 PMID:10639171 PMID:10804213 GO_REF:0000024 NCBI chr 3:64,359,554...64,363,526
Ensembl chr 3:64,359,395...64,363,649
JBrowse link
G Neurod6 neuronal differentiation 6 acts_upstream_of_or_within ISO MGI:1339708 (PMID:10804213) RGD PMID:10804213 NCBI chr 4:84,846,659...84,849,905
Ensembl chr 4:84,846,231...84,849,999
JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within ISO MGI:2151350|MGI:2181426 (PMID:12527005), (PMID:17953618) RGD PMID:12527005 PMID:17953618 NCBI chr20:46,050,134...46,071,257
Ensembl chr20:46,050,414...46,073,949
JBrowse link
G Pianp PILR alpha associated neural protein acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:31511635)
GO_REF:0000107
RGD
Ensembl
PMID:31511635 GO_REF:0000107 NCBI chr 4:157,796,425...157,804,842
Ensembl chr 4:157,798,808...157,804,842
JBrowse link
G Pomgnt1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3623521 (PMID:21970971)
Ensembl
RGD
PMID:21970971 GO_REF:0000107 NCBI chr 5:129,634,274...129,644,150
Ensembl chr 5:129,634,294...129,644,149
JBrowse link
G Pomt2 protein-O-mannosyltransferase 2 acts_upstream_of_or_within ISO MGI:5302103 (PMID:21970971) RGD PMID:21970971 NCBI chr 6:106,755,462...106,794,849
Ensembl chr 6:106,755,462...106,794,849
JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (PMID:20808958) RGD PMID:20808958 NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (PMID:17706614) RGD PMID:17706614 NCBI chr 1:230,630,443...230,697,070
Ensembl chr 1:230,630,338...230,696,838
JBrowse link
G Reln reelin IMP RGD PMID:15459104 RGD:2317799 NCBI chr 4:12,736,177...13,162,956
Ensembl chr 4:12,736,130...13,162,211
JBrowse link
G Scn2a sodium voltage-gated channel alpha subunit 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1309503 (PMID:16464983)
Ensembl
RGD
PMID:16464983 GO_REF:0000107 NCBI chr 3:70,710,862...70,845,569
Ensembl chr 3:50,302,877...50,437,214
JBrowse link
G Sct secretin acts_upstream_of_or_within ISO MGI:3815315 (PMID:21159798) RGD PMID:21159798 NCBI chr 1:196,382,857...196,383,668
Ensembl chr 1:196,382,856...196,383,658
JBrowse link
G Smo smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2176256|MGI:2179048 (PMID:18297065)
Ensembl
RGD
PMID:18297065 GO_REF:0000107 NCBI chr 4:58,343,626...58,373,823
Ensembl chr 4:58,343,529...58,373,829
JBrowse link
G Tmem108 transmembrane protein 108 involved_in ISO (PMID:28096412) RGD PMID:28096412 NCBI chr 8:104,066,081...104,360,172
Ensembl chr 8:104,066,078...104,360,094
JBrowse link
G Tuba1a tubulin, alpha 1A involved_in ISO MGI:3617352 (PMID:21041996) RGD PMID:21041996 NCBI chr 7:130,113,214...130,116,880
Ensembl chr 7:130,081,032...130,196,186
JBrowse link
G Vps13b vacuolar protein sorting 13 homolog B acts_upstream_of_or_within ISO (PMID:37573958) RGD PMID:37573958 NCBI chr 7:66,557,862...67,128,429
Ensembl chr 7:66,558,471...67,128,429
JBrowse link
embryonic olfactory bulb interneuron precursor migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arx aristaless related homeobox involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2429693 (PMID:15677725)
Ensembl
RGD
PMID:15677725 GO_REF:0000107 NCBI chr  X:58,016,233...58,028,149
Ensembl chr  X:58,016,233...58,028,142
JBrowse link
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within ISO MGI:1932522|MGI:2663662 (PMID:17409253) RGD PMID:17409253 NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251
JBrowse link
extension of a leading process involved in cell motility in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Srgap2 SLIT-ROBO Rho GTPase activating protein 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:19737524)
UniProt
RGD
PMID:19737524 GO_REF:0000024 NCBI chr13:42,745,956...42,967,091
Ensembl chr13:42,745,947...42,967,058
JBrowse link
hippocampus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1c activin A receptor type 1C IEP RGD PMID:8940033 RGD:631880 NCBI chr 3:42,815,490...42,892,423
Ensembl chr 3:42,822,610...42,892,327
JBrowse link
G Akap5 A-kinase anchoring protein 5 IEP RGD PMID:19535604 RGD:2313144 NCBI chr 6:95,051,527...95,061,075
Ensembl chr 6:95,051,537...95,061,578
JBrowse link
G Akr1c14 aldo-keto reductase family 1, member C14 IEP RGD PMID:21047951 RGD:4145527 NCBI chr17:66,156,286...66,173,277
Ensembl chr17:66,156,288...66,173,277
JBrowse link
G Alk ALK receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:5700373 (PMID:17487225) RGD PMID:17487225 NCBI chr 6:22,879,653...23,599,636
Ensembl chr 6:22,880,625...23,598,034
JBrowse link
G Anxa3 annexin A3 IEP RGD PMID:18493952 RGD:2302825 NCBI chr14:12,727,708...12,781,717
Ensembl chr14:12,719,795...12,781,617
JBrowse link
G Atg16l1 autophagy related 16-like 1 acts_upstream_of_or_within ISO MGI:4432181 (PMID:29078390) RGD PMID:29078390 NCBI chr 9:88,420,737...88,457,530
Ensembl chr 9:88,422,038...88,457,529
JBrowse link
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 IEP RGD PMID:16200642 RGD:6906893 NCBI chr13:45,156,137...45,255,292
Ensembl chr13:45,156,146...45,255,246
JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 acts_upstream_of_or_within ISO MGI:3767672 (PMID:18032602) RGD PMID:18032602 NCBI chr 1:202,184,812...202,204,118
Ensembl chr 1:202,186,125...202,204,086
JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 acts_upstream_of_or_within ISO MGI:3521669 (PMID:18032602) RGD PMID:18032602 NCBI chr19:10,909,653...10,944,998
Ensembl chr19:10,909,619...10,944,993
JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within ISO MGI:3045473 (PMID:18032602), (PMID:24695551) RGD PMID:18032602 PMID:24695551 NCBI chr 8:59,731,912...59,765,408
Ensembl chr 8:59,731,912...59,765,607
JBrowse link
G Bcan brevican involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2388924 (PMID:12370289)
Ensembl
RGD
PMID:12370289 GO_REF:0000107 NCBI chr 2:173,454,479...173,467,717
Ensembl chr 2:173,454,482...173,467,460
JBrowse link
G Casp3 caspase 3 IEP RGD PMID:18459132 RGD:2293317 NCBI chr16:52,395,539...52,413,794
Ensembl chr16:45,662,910...45,684,648
JBrowse link
G Cdk5 cyclin-dependent kinase 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1861809 (PMID:11517264)
Ensembl
RGD
PMID:11517264 GO_REF:0000107 NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
JBrowse link
G Cdk5r1 cyclin-dependent kinase 5 regulatory subunit 1 acts_upstream_of_or_within ISO MGI:1330828 (PMID:11517264) RGD PMID:11517264 NCBI chr10:65,484,266...65,485,467
Ensembl chr10:65,483,941...65,488,456
JBrowse link
G Cdk5r2 cyclin-dependent kinase 5 regulatory subunit 2 acts_upstream_of_or_within ISO MGI:101764 (PMID:11517264) RGD PMID:11517264 NCBI chr 9:76,416,251...76,417,719
Ensembl chr 9:76,416,062...76,418,344
JBrowse link
G Cfl1 cofilin 1 IEP RGD PMID:27073215 RGD:11568695 NCBI chr 1:202,796,012...202,801,337
Ensembl chr 1:202,786,627...202,817,587
JBrowse link
G Chrna2 cholinergic receptor nicotinic alpha 2 subunit part_of IEP RGD PMID:17046198 RGD:152995358 NCBI chr15:40,342,317...40,358,601
Ensembl chr15:40,342,317...40,358,601
JBrowse link
G Chrna5 cholinergic receptor nicotinic alpha 5 subunit IEP RGD PMID:15558717 RGD:150530459 NCBI chr 8:55,369,794...55,398,526
Ensembl chr 8:55,369,794...55,398,146
JBrowse link
G Crk CRK proto-oncogene, adaptor protein acts_upstream_of_or_within ISO MGI:104686 (PMID:19074029) RGD PMID:19074029 NCBI chr10:60,530,469...60,556,703
Ensembl chr10:60,530,464...60,553,406
JBrowse link
G Crkl CRK like proto-oncogene, adaptor protein acts_upstream_of_or_within ISO MGI:88508 (PMID:19074029) RGD PMID:19074029 NCBI chr11:83,528,788...83,563,214
Ensembl chr11:83,526,530...83,563,238
JBrowse link
G Cyp11a1 cytochrome P450, family 11, subfamily a, polypeptide 1 IEP RGD PMID:21047951 RGD:4145527 NCBI chr 8:58,422,807...58,434,342
Ensembl chr 8:58,404,669...58,434,338
JBrowse link
G Cyp17a1 cytochrome P450, family 17, subfamily a, polypeptide 1 IEP RGD PMID:21047951 RGD:4145527 NCBI chr 1:255,476,861...255,484,547
Ensembl chr 1:245,535,462...245,541,573
JBrowse link
G Cyp19a1 cytochrome P450, family 19, subfamily a, polypeptide 1 IEP RGD PMID:21047951 RGD:4145527 NCBI chr 8:63,449,148...63,476,534
Ensembl chr 8:54,553,165...54,580,758
JBrowse link
G Dab1 DAB adaptor protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3777252 (PMID:18477607)
Ensembl
RGD
PMID:18477607 GO_REF:0000107 NCBI chr 5:118,392,953...119,513,625
Ensembl chr 5:119,140,533...119,510,552
JBrowse link
G Dclk2 doublecortin-like kinase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1277171 (PMID:19342486)
Ensembl
RGD
PMID:19342486 GO_REF:0000107 NCBI chr 2:172,202,733...172,338,411
Ensembl chr 2:172,208,706...172,338,250
JBrowse link
G Dcx doublecortin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1918012|MGI:2387757 (PMID:19342486)
Ensembl
RGD
PMID:19342486 GO_REF:0000107 NCBI chr  X:107,430,767...107,573,612
Ensembl chr  X:107,430,767...107,507,476
JBrowse link
G Dlx1 distal-less homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:94902 (PMID:11163262)
Ensembl
RGD
PMID:11163262 GO_REF:0000107 NCBI chr 3:56,356,190...56,360,780
Ensembl chr 3:56,356,190...56,360,780
JBrowse link
G Dlx2 distal-less homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:94901 (PMID:11163262)
Ensembl
RGD
PMID:11163262 GO_REF:0000107 NCBI chr 3:56,370,238...56,373,581
Ensembl chr 3:56,370,483...56,373,597
JBrowse link
G Drd1 dopamine receptor D1 acts_upstream_of_or_within ISO MGI:2181426|MGI:3707260 (PMID:17360497) RGD PMID:17360497 NCBI chr17:10,540,440...10,544,971
Ensembl chr17:10,540,558...10,545,002
JBrowse link
G Eif2b2 eukaryotic translation initiation factor 2B subunit beta IEP RGD PMID:12850562 RGD:11041879 NCBI chr 6:104,866,926...104,873,351
Ensembl chr 6:104,866,753...104,873,353
JBrowse link
G Eif2b3 eukaryotic translation initiation factor 2B subunit gamma IEP RGD PMID:12850562 RGD:11041879 NCBI chr 5:130,492,167...130,558,692
Ensembl chr 5:130,492,220...130,563,332
JBrowse link
G Eif2b4 eukaryotic translation initiation factor 2B subunit delta IEP RGD PMID:12850562 RGD:11041879 NCBI chr 6:25,183,177...25,188,832
Ensembl chr 6:25,183,186...25,188,829
JBrowse link
G Eif2b5 eukaryotic translation initiation factor 2B subunit epsilon IEP RGD PMID:12850562 RGD:11041879 NCBI chr11:80,394,433...80,404,468
Ensembl chr11:80,394,433...80,404,419
JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 IEP RGD PMID:18565716 RGD:13204724 NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715
JBrowse link
G Epha5 EPH receptor A5 involved_in ISS
ISO
GO_REF:0000024
(PMID:12124402)
UniProt
RGD
PMID:12124402 GO_REF:0000024 NCBI chr14:23,653,393...24,020,129
Ensembl chr14:23,653,393...24,017,317
JBrowse link
G Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit IEP RGD PMID:23932971 RGD:9587811 NCBI chr10:86,126,023...86,162,001
Ensembl chr10:86,126,015...86,161,921
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit IEP RGD PMID:23932971 RGD:9587811 NCBI chr 4:76,624,399...76,687,362
Ensembl chr 4:76,624,399...76,687,362
JBrowse link
G Fbxo41 F-box protein 41 acts_upstream_of_or_within ISO (PMID:35372812) RGD PMID:35372812 NCBI chr 4:118,007,517...118,039,547
Ensembl chr 4:118,010,978...118,039,406
JBrowse link
G Fez1 fasciculation and elongation protein zeta 1 IEP RGD PMID:14992819 RGD:13208825 NCBI chr 8:36,544,462...36,589,684
Ensembl chr 8:36,544,535...36,589,683
JBrowse link
G Fgf13 fibroblast growth factor 13 involved_in ISS
ISO
GO_REF:0000024
(PMID:22726441)
UniProt
RGD
PMID:22726441 GO_REF:0000024 NCBI chr  X:137,276,498...137,800,056
Ensembl chr  X:137,276,511...137,800,391
JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:2684610|MGI:3798847 (PMID:22235033) RGD PMID:22235033 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A IEP RGD PMID:19535712 RGD:2325978 NCBI chr10:5,629,683...6,053,262
Ensembl chr10:5,631,369...6,044,637
JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B IEP RGD PMID:19535712 RGD:2325978 NCBI chr 4:168,580,824...169,044,110
Ensembl chr 4:168,599,546...169,042,279
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in ISO
IEA
(PMID:19581563)
GO_REF:0000107
RGD
Ensembl
PMID:19581563 GO_REF:0000107 NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
JBrowse link
G Hdac1 histone deacetylase 1 acts_upstream_of_or_within ISO MGI:1097691 (PMID:19380719) RGD PMID:19380719 NCBI chr 5:141,853,992...141,881,057
Ensembl chr 5:141,853,989...141,881,111
JBrowse link
G Hdac2 histone deacetylase 2 acts_upstream_of_or_within ISO MGI:108086 (PMID:19380719) RGD PMID:19380719 NCBI chr20:40,548,244...40,571,609
Ensembl chr20:40,548,250...40,571,609
JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K IEP RGD PMID:22102872 RGD:10002783 NCBI chr17:6,262,936...6,275,001
Ensembl chr17:6,262,998...6,274,997
JBrowse link
G Hsd17b3 hydroxysteroid (17-beta) dehydrogenase 3 IEP RGD PMID:21047951 RGD:4145527 NCBI chr17:1,027,229...1,058,554
Ensembl chr17:1,027,229...1,058,554
JBrowse link
G Hsd17b7 hydroxysteroid (17-beta) dehydrogenase 7 IEP RGD PMID:21047951 RGD:4145527 NCBI chr13:82,170,079...82,190,018
Ensembl chr13:82,173,179...82,190,017
JBrowse link
G Hsd3b1 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 IEP RGD PMID:21047951 RGD:4145527 NCBI chr 2:186,169,864...186,175,984
Ensembl chr 2:186,169,863...186,175,999
JBrowse link
G Hsd3b2 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2 IEP RGD PMID:21047951 RGD:4145527 NCBI chr 2:188,784,614...188,812,535
Ensembl chr 2:186,095,897...186,101,852
JBrowse link
G Htr5a 5-hydroxytryptamine receptor 5A IEP RGD PMID:16572590 RGD:2316993 NCBI chr 4:7,444,968...7,454,651
Ensembl chr 4:7,444,968...7,454,651
JBrowse link
G Id4 inhibitor of DNA binding 4 acts_upstream_of_or_within ISO MGI:3505549 (PMID:15469968) RGD PMID:15469968 NCBI chr17:16,389,387...16,391,956
Ensembl chr17:16,389,387...16,392,470
JBrowse link
G Igf1r insulin-like growth factor 1 receptor IEP RGD PMID:22042446 RGD:10403040 NCBI chr 1:121,549,831...121,838,548
Ensembl chr 1:121,550,743...121,831,777
JBrowse link
G Insr insulin receptor IEP RGD PMID:22042446 RGD:10403040 NCBI chr12:1,193,193...1,330,976
Ensembl chr12:1,197,100...1,330,883
JBrowse link
G Kcna1 potassium voltage-gated channel subfamily A member 1 involved_in ISO (PMID:17315199) RGD PMID:17315199 NCBI chr 4:159,464,223...159,472,905
Ensembl chr 4:159,464,188...159,472,682
JBrowse link
G Kcnq2 potassium voltage-gated channel subfamily Q member 2 acts_upstream_of_or_within ISO (PMID:15608631) RGD PMID:15608631 NCBI chr 3:168,194,776...168,253,831
Ensembl chr 3:168,195,357...168,275,071
JBrowse link
G Kdm6b lysine demethylase 6B IDA RGD PMID:23932971 RGD:9587811 NCBI chr10:54,120,716...54,142,212
Ensembl chr10:54,121,848...54,130,794
JBrowse link
G Kif14 kinesin family member 14 involved_in ISO (PMID:23308235) RGD PMID:23308235 NCBI chr13:47,926,975...47,990,598
Ensembl chr13:47,927,044...47,989,164
JBrowse link
G Kif5a kinesin family member 5A IEP RGD PMID:9349526 RGD:12792964 NCBI chr 7:63,051,894...63,089,024
Ensembl chr 7:63,049,424...63,092,858
JBrowse link
G Kif5b kinesin family member 5B IEP RGD PMID:9349526 RGD:12792964 NCBI chr17:51,489,904...51,527,508
Ensembl chr17:51,489,944...51,527,508
JBrowse link
G Kirrel3 kirre like nephrin family adhesion molecule 3 involved_in ISO (PMID:26575286) RGD PMID:26575286 NCBI chr 8:32,865,779...33,407,555
Ensembl chr 8:32,862,776...33,405,676
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within ISO MGI:1933764 (PMID:10631168) RGD PMID:10631168 NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794
JBrowse link
G Lhx5 LIM homeobox 5 acts_upstream_of_or_within ISO MGI:2152620 (PMID:10325223) RGD PMID:10325223 NCBI chr12:36,126,186...36,134,625
Ensembl chr12:36,126,186...36,134,625
JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha acts_upstream_of_or_within ISO MGI:1888413 (PMID:1638738) RGD PMID:1638738 NCBI chr13:79,834,614...79,978,253
Ensembl chr13:79,835,019...79,978,253
JBrowse link
G Lrp8 LDL receptor related protein 8 acts_upstream_of_or_within ISO MGI:109520 (PMID:17330141) RGD PMID:17330141 NCBI chr 5:122,563,468...122,635,434
Ensembl chr 5:122,563,453...122,631,352
JBrowse link
G Mas1 MAS1 proto-oncogene, G protein-coupled receptor IEP RGD PMID:1521325 RGD:2316795 NCBI chr 1:47,879,956...47,911,500
Ensembl chr 1:47,880,309...47,911,709
JBrowse link
G Mdk midkine involved_in ISO (PMID:10096022) RGD PMID:10096022 NCBI chr 3:77,901,134...77,903,997
Ensembl chr 3:77,901,158...77,903,130
JBrowse link
G Mecp2 methyl CpG binding protein 2 IEP RGD PMID:14751287 RGD:12743658 NCBI chr  X:151,781,177...151,844,687
Ensembl chr  X:151,789,930...151,844,689
JBrowse link
G Mfsd2a MFSD2 lysolipid transporter A, lysophospholipid involved_in ISO (PMID:24828044) RGD PMID:24828044 NCBI chr 5:135,225,801...135,240,744
Ensembl chr 5:135,225,816...135,240,690
JBrowse link
G Mkks MKKS centrosomal shuttling protein acts_upstream_of_or_within ISO MGI:3526444 (PMID:18032602) RGD PMID:18032602 NCBI chr 3:124,201,877...124,221,142
Ensembl chr 3:124,201,877...124,220,162
JBrowse link
G Ncoa1 nuclear receptor coactivator 1 IEP RGD PMID:22085911 RGD:5688137 NCBI chr 6:27,232,609...27,507,992
Ensembl chr 6:27,232,611...27,475,664
JBrowse link
G Nefh neurofilament heavy chain IEP RGD PMID:14620872 RGD:9743946 NCBI chr14:79,830,362...79,840,347
Ensembl chr14:79,830,362...79,840,351
JBrowse link
G Nefl neurofilament light chain IEP RGD PMID:14620872 RGD:9743946 NCBI chr15:42,301,920...42,305,793
Ensembl chr15:42,301,916...42,305,793
JBrowse link
G Nefm neurofilament medium chain IEP RGD PMID:14620872 RGD:9743946 NCBI chr15:42,360,449...42,365,753
Ensembl chr15:42,360,454...42,365,755
JBrowse link
G Nf2 NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:23863479)
Ensembl
RGD
PMID:23863479 GO_REF:0000107 NCBI chr14:79,627,399...79,710,709
Ensembl chr14:79,627,399...79,710,667
JBrowse link
G Nfix nuclear factor I X involved_in ISO MGI:3802571 (PMID:18477394), (PMID:23042739), (PMID:23776487), (PMID:23964093) RGD PMID:18477394 PMID:23042739 PMID:23776487 PMID:23964093 NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265
JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857494 (PMID:11163262)
Ensembl
RGD
PMID:11163262 GO_REF:0000107 NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791
JBrowse link
G Nme1 NME/NM23 nucleoside diphosphate kinase 1 IEP RGD PMID:18493952 RGD:2302825 NCBI chr10:78,907,036...78,929,659
Ensembl chr10:78,906,083...78,916,408
JBrowse link
G Nog noggin IEP RGD PMID:15171992 RGD:10416525 NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339
JBrowse link
G Nr4a3 nuclear receptor subfamily 4, group A, member 3 acts_upstream_of_or_within ISO MGI:3037444 (PMID:15456880) RGD PMID:15456880 NCBI chr 5:62,361,588...62,401,489
Ensembl chr 5:62,361,822...62,402,733
JBrowse link
G Ogdh oxoglutarate dehydrogenase involved_in IEA
ISO
GO_REF:0000107
(PMID:16901643)
Ensembl
RGD
PMID:16901643 GO_REF:0000107 NCBI chr14:81,150,021...81,217,479
Ensembl chr14:81,150,091...81,217,479
JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 acts_upstream_of_or_within ISO MGI:1340044|MGI:2384054 (PMID:10729324), (PMID:17330141) RGD PMID:10729324 PMID:17330141 NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808
JBrowse link
G Pebp1 phosphatidylethanolamine binding protein 1 IEP RGD PMID:18493952 RGD:2302825 NCBI chr12:39,302,864...39,307,064
Ensembl chr12:39,302,840...39,307,862
JBrowse link
G Phlpp1 PH domain and leucine rich repeat protein phosphatase 1 IEP RGD PMID:20819118 RGD:8693633 NCBI chr13:22,308,532...22,530,978
Ensembl chr13:22,308,548...22,530,977
JBrowse link
G Phlpp2 PH domain and leucine rich repeat protein phosphatase 2 IEP RGD PMID:20819118 RGD:8693633 NCBI chr19:37,835,125...37,901,804
Ensembl chr19:37,835,125...37,905,513
JBrowse link
G Plxna3 plexin A3 acts_upstream_of_or_within ISO MGI:2386961 (PMID:11683995) RGD PMID:11683995 NCBI chr  X:152,115,699...152,131,608
Ensembl chr  X:152,115,819...152,131,603
JBrowse link
G Ppp1r9b protein phosphatase 1, regulatory subunit 9B IEP RGD PMID:21123436 RGD:10043818 NCBI chr10:79,938,055...79,954,085
Ensembl chr10:79,938,066...79,954,083
JBrowse link
G Ptprs protein tyrosine phosphatase, receptor type, S involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2158734 (PMID:15842738)
Ensembl
RGD
PMID:15842738 GO_REF:0000107 NCBI chr 9:1,245,408...1,307,015
Ensembl chr 9:1,245,410...1,306,947
JBrowse link
G Ptprz1 protein tyrosine phosphatase, receptor type Z1 IEP RGD PMID:10906718 RGD:9589828 NCBI chr 4:51,397,316...51,595,220
Ensembl chr 4:51,397,601...51,595,218
JBrowse link
G Ran RAN, member RAS oncogene family IEP RGD PMID:18493952 RGD:2302825 NCBI chr12:27,674,049...27,678,598
Ensembl chr12:27,674,050...27,678,276
JBrowse link
G Rara retinoic acid receptor, alpha IEP RGD PMID:18619947 RGD:8693612 NCBI chr10:83,883,490...83,928,932
Ensembl chr10:83,893,384...83,928,142
JBrowse link
G Reln reelin involved_in IEA
ISO
GO_REF:0000107
(PMID:17229826)
Ensembl
RGD
PMID:17229826 GO_REF:0000107 NCBI chr 4:12,736,177...13,162,956
Ensembl chr 4:12,736,130...13,162,211
JBrowse link
G Sct secretin involved_in ISS
ISO
GO_REF:0000024
(PMID:18534766)
UniProt
RGD
PMID:18534766 GO_REF:0000024 NCBI chr 1:196,382,857...196,383,668
Ensembl chr 1:196,382,856...196,383,658
JBrowse link
G Sema6b semaphorin 6B involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:20484647)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:20484647 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:950,939...967,905
Ensembl chr 9:950,939...961,521
JBrowse link
G Slc17a6 solute carrier family 17 member 6 IEP RGD PMID:18502731 RGD:9999204 NCBI chr 1:101,212,489...101,252,543
Ensembl chr 1:101,212,489...101,252,542
JBrowse link
G Slc32a1 solute carrier family 32 member 1 IEP RGD PMID:18502731 RGD:9999204 NCBI chr 3:147,267,373...147,271,842
Ensembl chr 3:147,267,373...147,271,844
JBrowse link
G Srd5a1 steroid 5 alpha-reductase 1 IEP RGD PMID:8770891 RGD:4892048 NCBI chr 1:33,686,069...33,720,468
Ensembl chr 1:33,686,391...33,720,461
JBrowse link
G Srd5a2 steroid 5 alpha-reductase 2 IEP RGD PMID:21047951 RGD:4145527 NCBI chr 6:21,426,225...21,465,727
Ensembl chr 6:21,426,215...21,462,112
JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO MGI:2181426|MGI:2385464 (PMID:15837932) RGD PMID:15837932 NCBI chr 9:14,426,453...14,435,734
Ensembl chr 9:14,426,472...14,435,733
JBrowse link
G Tent2 terminal nucleotidyltransferase 2 IEP RGD PMID:24074826 RGD:9684936 NCBI chr 2:24,380,135...24,432,099
Ensembl chr 2:24,380,225...24,432,099
JBrowse link
G Tp73 tumor protein p73 acts_upstream_of_or_within ISO MGI:1859911 (PMID:10716451) RGD PMID:10716451 NCBI chr 5:164,621,377...164,703,958
Ensembl chr 5:164,621,377...164,681,128
JBrowse link
G Tsc1 TSC complex subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2176055|MGI:2656240 (PMID:17522300)
Ensembl
RGD
PMID:17522300 GO_REF:0000107 NCBI chr 3:11,969,547...12,018,591
Ensembl chr 3:11,979,729...12,015,674
JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:31983064)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:31983064 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:152,660,259...152,671,682
Ensembl chr 1:152,656,693...152,672,588
JBrowse link
G Tuba1a tubulin, alpha 1A involved_in ISO MGI:3617352 (PMID:17218254) RGD PMID:17218254 NCBI chr 7:130,113,214...130,116,880
Ensembl chr 7:130,081,032...130,196,186
JBrowse link
G Uba6 ubiquitin-like modifier activating enzyme 6 acts_upstream_of_or_within ISO MGI:2176173|MGI:5509054 (PMID:23499007) RGD PMID:23499007 NCBI chr14:21,884,039...21,947,857
Ensembl chr14:21,884,039...21,947,857
JBrowse link
G Uqcrq ubiquinol-cytochrome c reductase, complex III subunit VII involved_in ISO (PMID:16901643) RGD PMID:16901643 NCBI chr10:37,585,864...37,589,328
Ensembl chr10:37,586,888...37,589,169
JBrowse link
G Usp9x ubiquitin specific peptidase 9, X-linked acts_upstream_of_or_within ISO MGI:5438072 (PMID:23861879) RGD PMID:23861879 NCBI chr  X:9,588,825...9,726,993
Ensembl chr  X:9,588,825...9,696,711
JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO MGI:1857489 (PMID:10631167) RGD PMID:10631167 NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324
JBrowse link
G Xrcc1 X-ray repair cross complementing 1 acts_upstream_of_or_within ISO MGI:3836442 (PMID:19633665) RGD PMID:19633665 NCBI chr 1:80,140,495...80,168,705
Ensembl chr 1:80,141,207...80,168,701
JBrowse link
G Xrn2 5'-3' exoribonuclease 2 IEP RGD PMID:23933240 RGD:9684963 NCBI chr 3:134,436,916...134,509,308
Ensembl chr 3:134,437,109...134,509,306
JBrowse link
G Ywhae tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2667341 (PMID:12796778)
Ensembl
RGD
PMID:12796778 GO_REF:0000107 NCBI chr10:60,584,665...60,622,352
Ensembl chr10:60,584,652...60,671,589
JBrowse link
G Zbtb18 zinc finger and BTB domain containing 18 acts_upstream_of_or_within ISO MGI:3851929 (PMID:19409883) RGD PMID:19409883 NCBI chr13:89,439,501...89,447,958
Ensembl chr13:89,439,420...89,448,862
JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO MGI:2387499|MGI:2684610 (PMID:17644613) RGD PMID:17644613 NCBI chr 3:29,214,581...29,344,890
Ensembl chr 3:29,218,301...29,345,157
JBrowse link
G Zic1 Zic family member 1 involved_in ISO MGI:106676 (PMID:17507568) RGD PMID:17507568 NCBI chr 8:91,908,548...91,918,020
Ensembl chr 8:91,908,576...91,912,731
JBrowse link
G Zic3 Zic family member 3 involved_in ISO MGI:106683 (PMID:17507568) RGD PMID:17507568 NCBI chr  X:136,123,662...136,129,627
Ensembl chr  X:136,124,026...136,134,746
JBrowse link
interneuron migration from the subpallium to the cortex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl13b ARF like GTPase 13B involved_in ISO (PMID:23153492) RGD PMID:23153492 NCBI chr11:150,100...217,103
Ensembl chr11:150,955...217,197
JBrowse link
lateral ganglionic eminence cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856282 (PMID:20943929) RGD PMID:20943929 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
JBrowse link
lateral ventricle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp1 aquaporin 1 involved_in ISO
IEP
(PMID:16133142) RGD PMID:16133142 PMID:16133142 RGD:8553876 NCBI chr 4:84,482,512...84,494,690
Ensembl chr 4:84,482,512...84,494,690
JBrowse link
G Atp1b2 ATPase Na+/K+ transporting subunit beta 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:7525597)
Ensembl
RGD
PMID:7525597 GO_REF:0000107 NCBI chr10:54,318,698...54,324,933
Ensembl chr10:54,318,701...54,324,933
JBrowse link
G Dbi diazepam binding inhibitor acts_upstream_of_or_within ISO (PMID:17150371) RGD PMID:17150371 NCBI chr13:31,241,466...31,249,853
Ensembl chr13:31,206,988...31,268,693
JBrowse link
G Dnah5 dynein, axonemal, heavy chain 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2180081 (PMID:11912187)
Ensembl
RGD
PMID:11912187 GO_REF:0000107 NCBI chr 2:78,937,788...79,255,551
Ensembl chr 2:78,937,800...79,254,890
JBrowse link
G Dpcd deleted in primary ciliary dyskinesia involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:20080492)
Ensembl
RGD
PMID:20080492 GO_REF:0000107 NCBI chr 1:244,408,766...244,426,891
Ensembl chr 1:244,408,785...244,426,888
JBrowse link
G Kdm2b lysine demethylase 2B involved_in ISO (PMID:21220025) RGD PMID:21220025 NCBI chr12:33,566,530...33,701,366
Ensembl chr12:33,574,657...33,701,355
JBrowse link
G Myh10 myosin heavy chain 10 acts_upstream_of_or_within ISO MGI:2386439|MGI:2386445 (PMID:10712438), (PMID:11283949), (PMID:9356462) RGD PMID:9356462 PMID:10712438 PMID:11283949 NCBI chr10:53,393,901...53,525,174
Ensembl chr10:53,394,389...53,525,165
JBrowse link
G Nfix nuclear factor I X involved_in
acts_upstream_of_or_within
ISO MGI:3714028 (PMID:25960350)
MGI:3802571 (PMID:29452604)
RGD PMID:25960350 PMID:29452604 NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265
JBrowse link
G Numb NUMB, endocytic adaptor protein involved_in IEA
ISO
GO_REF:0000107
(PMID:17174898)
Ensembl
RGD
PMID:17174898 GO_REF:0000107 NCBI chr 6:103,431,400...103,553,422
Ensembl chr 6:103,431,400...103,553,354
JBrowse link
G Numbl NUMB-like, endocytic adaptor protein involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:17174898)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:17174898 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:82,549,814...82,573,788
Ensembl chr 1:82,550,054...82,573,776
JBrowse link
G Pax5 paired box 5 acts_upstream_of_or_within ISO MGI:2386577 (PMID:23349049) RGD PMID:23349049 NCBI chr 5:58,763,334...58,945,719
Ensembl chr 5:58,765,036...58,944,326
JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within ISO MGI:3716208 (PMID:17558409) RGD PMID:17558409 NCBI chr19:15,692,189...15,785,083
Ensembl chr19:15,692,150...15,785,083
JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4867728 (PMID:21055390)
Ensembl
RGD
PMID:21055390 GO_REF:0000107 NCBI chr 1:152,660,259...152,671,682
Ensembl chr 1:152,656,693...152,672,588
JBrowse link
G Uchl5 ubiquitin C-terminal hydrolase L5 involved_in ISO (PMID:21048919) RGD PMID:21048919 NCBI chr13:55,520,722...55,556,503
Ensembl chr13:55,520,729...55,556,502
JBrowse link
layer formation in cerebral cortex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrg1 adhesion G protein-coupled receptor G1 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:18509043)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:18509043 GO_REF:0000024 GO_REF:0000107 NCBI chr19:10,003,963...10,041,122
Ensembl chr19:10,003,975...10,041,108
JBrowse link
G Cdk5 cyclin-dependent kinase 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1861809 (PMID:11517264)
Ensembl
RGD
PMID:11517264 GO_REF:0000107 NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
JBrowse link
G Cdk5r1 cyclin-dependent kinase 5 regulatory subunit 1 acts_upstream_of_or_within ISO MGI:1330828 (PMID:11517264) RGD PMID:11517264 NCBI chr10:65,484,266...65,485,467
Ensembl chr10:65,483,941...65,488,456
JBrowse link
G Cdk5r2 cyclin-dependent kinase 5 regulatory subunit 2 acts_upstream_of_or_within ISO MGI:101764 (PMID:11517264) RGD PMID:11517264 NCBI chr 9:76,416,251...76,417,719
Ensembl chr 9:76,416,062...76,418,344
JBrowse link
G Col3a1 collagen type III alpha 1 chain involved_in ISO (PMID:22235340) RGD PMID:22235340 NCBI chr 9:47,374,611...47,410,547
Ensembl chr 9:47,374,593...47,410,547
JBrowse link
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2148567|MGI:3701617 (PMID:20503375)
Ensembl
RGD
PMID:20503375 GO_REF:0000107 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
JBrowse link
G Dab2ip DAB2 interacting protein involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:23056358)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:23056358 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:18,915,290...19,086,282
Ensembl chr 3:18,915,290...19,086,280
JBrowse link
G Dcx doublecortin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2387757 (PMID:19342486)
Ensembl
RGD
PMID:19342486 GO_REF:0000107 NCBI chr  X:107,430,767...107,573,612
Ensembl chr  X:107,430,767...107,507,476
JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:2176173|MGI:3798847 (PMID:21525285) RGD PMID:21525285 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
JBrowse link
G Lrp8 LDL receptor related protein 8 acts_upstream_of_or_within ISO MGI:109520 (PMID:17330141) RGD PMID:17330141 NCBI chr 5:122,563,468...122,635,434
Ensembl chr 5:122,563,453...122,631,352
JBrowse link
G Mboat7 membrane bound O-acyltransferase domain containing 7 acts_upstream_of_or_within ISO MGI:5509338 (PMID:23097495) RGD PMID:23097495 NCBI chr 1:65,525,206...65,539,538
Ensembl chr 1:65,525,213...65,539,538
JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within ISO MGI:2151350 (PMID:15385616) RGD PMID:15385616 NCBI chr20:46,050,134...46,071,257
Ensembl chr20:46,050,414...46,073,949
JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 acts_upstream_of_or_within ISO MGI:1340044 (PMID:17330141) RGD PMID:17330141 NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808
JBrowse link
G Reln reelin involved_in
acts_upstream_of_or_within
IEA
ISO
ISS
GO_REF:0000107
(PMID:10880573)
GO_REF:0000024
MGI:1856398 (PMID:20847152)
Ensembl
RGD
UniProt
PMID:10880573 PMID:20847152 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:12,736,177...13,162,956
Ensembl chr 4:12,736,130...13,162,211
JBrowse link
G Socs7 suppressor of cytokine signaling 7 acts_upstream_of_or_within ISO MGI:5545789 (PMID:24210661) RGD PMID:24210661 NCBI chr10:82,352,159...82,388,829
Ensembl chr10:82,351,680...82,388,830
JBrowse link
G Ulk4 unc-51 like kinase 4 acts_upstream_of_or_within ISO (PMID:34235142) RGD PMID:34235142 NCBI chr 8:120,670,879...120,966,026
Ensembl chr 8:120,670,866...120,966,924
JBrowse link
negative regulation of cell motility involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmerb1 bMERB domain containing 1 acts_upstream_of_or_within ISO (PMID:25099998) RGD PMID:25099998 NCBI chr10:1,779,834...1,946,586
Ensembl chr10:1,779,835...1,946,575
JBrowse link
neuronal-glial interaction involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamb1 laminin subunit beta 1 involved_in ISO (PMID:23472759) RGD PMID:23472759 NCBI chr 6:47,835,492...47,902,585
Ensembl chr 6:47,835,525...47,902,585
JBrowse link
nucleokinesis involved in cell motility in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sun1 Sad1 and UNC84 domain containing 1 involved_in ISO (PMID:19874786) RGD PMID:19874786 NCBI chr12:15,396,378...15,441,277
Ensembl chr12:15,396,381...15,441,571
JBrowse link
G Sun2 Sad1 and UNC84 domain containing 2 involved_in ISO (PMID:19874786) RGD PMID:19874786 NCBI chr 7:111,275,374...111,292,565
Ensembl chr 7:111,275,380...111,292,553
JBrowse link
G Syne2 spectrin repeat containing nuclear envelope protein 2 involved_in ISO (PMID:19874786) RGD PMID:19874786 NCBI chr 6:94,537,088...94,848,085
Ensembl chr 6:94,537,088...94,848,064
JBrowse link
nucleus accumbens development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a3 aldehyde dehydrogenase 1 family, member A3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3512079 (PMID:17207476)
Ensembl
RGD
PMID:17207476 GO_REF:0000107 NCBI chr 1:119,982,272...120,017,416
Ensembl chr 1:119,982,277...120,017,436
JBrowse link
olfactory bulb development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtpbp1 ATP/GTP binding carboxypeptidase 1 involved_in ISO (PMID:11884758) RGD PMID:11884758 NCBI chr17:5,120,540...5,238,874
Ensembl chr17:5,120,609...5,238,869
JBrowse link
G Ak1 adenylate kinase 1 IEP RGD PMID:9920788 RGD:632499 NCBI chr 3:15,912,431...15,923,045
Ensembl chr 3:15,912,485...15,923,041
JBrowse link
G Ak3 adenylate kinase 3 IEP RGD PMID:9920788 RGD:632499 NCBI chr 1:226,737,472...226,764,647
Ensembl chr 1:226,739,318...226,764,625
JBrowse link
G Arx aristaless related homeobox acts_upstream_of_or_within ISO MGI:2429693 (PMID:15677725) RGD PMID:15677725 NCBI chr  X:58,016,233...58,028,149
Ensembl chr  X:58,016,233...58,028,142
JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 acts_upstream_of_or_within ISO MGI:3707678 (PMID:19279158) RGD PMID:19279158 NCBI chr 5:21,812,007...21,995,358
Ensembl chr 5:21,812,070...21,995,358
JBrowse link
G Crtac1 cartilage acidic protein 1 acts_upstream_of_or_within ISO (PMID:21817055) RGD PMID:21817055 NCBI chr 1:241,091,679...241,233,677
Ensembl chr 1:241,078,864...241,233,421
JBrowse link
G Csf1r colony stimulating factor 1 receptor involved_in IEA
ISO
GO_REF:0000107
(PMID:22542597)
Ensembl
RGD
PMID:22542597 GO_REF:0000107 NCBI chr18:54,546,673...54,590,418
Ensembl chr18:54,546,659...54,590,415
JBrowse link
G Dlx2 distal-less homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857828 (PMID:7590232)
Ensembl
RGD
PMID:7590232 GO_REF:0000107 NCBI chr 3:56,370,238...56,373,581
Ensembl chr 3:56,370,483...56,373,597
JBrowse link
G Dpysl2 dihydropyrimidinase-like 2 IEP RGD PMID:14751288 RGD:2316247 NCBI chr15:41,005,551...41,111,724
Ensembl chr15:41,005,551...41,111,829
JBrowse link
G Efna2 ephrin A2 IEP RGD PMID:12234653 RGD:634733 NCBI chr 7:9,515,635...9,528,071
Ensembl chr 7:9,516,429...9,527,061
JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 IEP RGD PMID:18565716 RGD:13204724 NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715
JBrowse link
G Eomes eomesodermin acts_upstream_of_or_within ISO MGI:3774027 (PMID:19435790) RGD PMID:19435790 NCBI chr 8:118,181,340...118,189,186
Ensembl chr 8:118,181,777...118,188,316
JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO MGI:2176173|MGI:2682061 (PMID:14605369) RGD PMID:14605369 NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357
JBrowse link
G Fezf1 Fez family zinc finger 1 acts_upstream_of_or_within ISO MGI:3626294 (PMID:16971467) RGD PMID:16971467 NCBI chr 4:51,762,751...51,766,078
Ensembl chr 4:51,762,751...51,766,078
JBrowse link
G Fut1 fucosyltransferase 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:16884711)
UniProt
RGD
PMID:16884711 GO_REF:0000024 NCBI chr 1:96,086,934...96,090,352
Ensembl chr 1:96,086,635...96,090,616
JBrowse link
G Gsx2 GS homeobox 2 involved_in ISO MGI:4412067 (PMID:28814342) RGD PMID:28814342 NCBI chr14:33,123,799...33,126,151
Ensembl chr14:33,124,381...33,126,105
JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO MGI:3830733 (PMID:19109490) RGD PMID:19109490 NCBI chr 6:41,740,556...41,742,393
Ensembl chr 6:41,728,946...41,744,400
JBrowse link
G Kif14 kinesin family member 14 involved_in ISO (PMID:23308235), (PMID:24931760) RGD PMID:23308235 PMID:24931760 NCBI chr13:47,926,975...47,990,598
Ensembl chr13:47,927,044...47,989,164
JBrowse link
G Lhx2 LIM homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4399044 (PMID:19820705)
Ensembl
RGD
PMID:19820705 GO_REF:0000107 NCBI chr 3:22,113,619...22,143,909
Ensembl chr 3:22,126,007...22,143,908
JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in ISO (PMID:21168496) RGD PMID:21168496 NCBI chr 7:122,826,696...122,987,711
Ensembl chr 7:122,826,696...122,987,703
JBrowse link
G Mecp2 methyl CpG binding protein 2 IEP RGD PMID:12605461 RGD:12790706 NCBI chr  X:151,781,177...151,844,687
Ensembl chr  X:151,789,930...151,844,689
JBrowse link
G Nfix nuclear factor I X involved_in ISO MGI:3802571 (PMID:25331604) RGD PMID:25331604 NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265
JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within ISO MGI:2151350|MGI:2176490 (PMID:11997145), (PMID:12527005) RGD PMID:11997145 PMID:12527005 NCBI chr20:46,050,134...46,071,257
Ensembl chr20:46,050,414...46,073,949
JBrowse link
G Pax6 paired box 6 IMP RGD PMID:14736749 RGD:8552333 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
JBrowse link
G Pcnt pericentrin acts_upstream_of_or_within ISO MGI:3799303 (PMID:20096683) RGD PMID:20096683 NCBI chr20:12,190,597...12,278,723
Ensembl chr20:12,191,648...12,278,710
JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within ISO MGI:3716208 (PMID:17558409) RGD PMID:17558409 NCBI chr19:15,692,189...15,785,083
Ensembl chr19:15,692,150...15,785,083
JBrowse link
G Sall1 spalt-like transcription factor 1 acts_upstream_of_or_within ISO MGI:2388379 (PMID:18024993) RGD PMID:18024993 NCBI chr19:18,005,782...18,022,705
Ensembl chr19:18,007,503...18,022,705
JBrowse link
G Sema3a semaphorin 3A involved_in ISO
ISS
(PMID:22416012)
GO_REF:0000024
RGD
UniProt
PMID:22416012 GO_REF:0000024 NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
JBrowse link
G Ski Ski proto-oncogene acts_upstream_of_or_within ISO MGI:2177555 (PMID:11731796) RGD PMID:11731796 NCBI chr 5:165,713,525...165,782,134
Ensembl chr 5:165,714,093...165,782,733
JBrowse link
G Slit1 slit guidance ligand 1 acts_upstream_of_or_within ISO MGI:1315205 (PMID:12097499) RGD PMID:12097499 NCBI chr 1:240,409,559...240,558,127
Ensembl chr 1:240,409,561...240,558,127
JBrowse link
G Slit2 slit guidance ligand 2 acts_upstream_of_or_within ISO MGI:1315203 (PMID:12097499) RGD PMID:12097499 NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
JBrowse link
G Ttc8 tetratricopeptide repeat domain 8 acts_upstream_of_or_within ISO MGI:5140723 (PMID:21646512) RGD PMID:21646512 NCBI chr 6:118,198,186...118,252,422
Ensembl chr 6:118,198,201...118,252,418
JBrowse link
G Zic1 Zic family member 1 involved_in ISO MGI:106676 (PMID:17507568) RGD PMID:17507568 NCBI chr 8:91,908,548...91,918,020
Ensembl chr 8:91,908,576...91,912,731
JBrowse link
G Zic3 Zic family member 3 involved_in ISO MGI:106683 (PMID:17507568), (PMID:28814342) RGD PMID:17507568 PMID:28814342 NCBI chr  X:136,123,662...136,129,627
Ensembl chr  X:136,124,026...136,134,746
JBrowse link
olfactory bulb interneuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf5 activating transcription factor 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:5467393 (PMID:23090999)
Ensembl
RGD
PMID:23090999 GO_REF:0000107 NCBI chr 1:95,295,602...95,299,755
Ensembl chr 1:95,295,610...95,299,707
JBrowse link
G Robo1 roundabout guidance receptor 1 involved_in ISO UniProtKB:Q7TPD3 (PMID:17360927) RGD PMID:17360927 NCBI chr11:10,580,863...11,621,675
Ensembl chr11:10,580,908...11,620,203
JBrowse link
G Robo2 roundabout guidance receptor 2 involved_in ISO (PMID:17360927) RGD PMID:17360927 NCBI chr11:12,528,949...14,096,726
Ensembl chr11:12,528,951...13,041,536
JBrowse link
G Sall3 spalt-like transcription factor 3 acts_upstream_of_or_within ISO MGI:3052730 (PMID:18260139) RGD PMID:18260139 NCBI chr18:74,406,066...74,425,974
Ensembl chr18:74,407,560...74,426,789
JBrowse link
G Wnt5a Wnt family member 5A involved_in IEA
ISO
GO_REF:0000107
(PMID:21539518)
Ensembl
RGD
PMID:21539518 GO_REF:0000107 NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234
JBrowse link
olfactory bulb interneuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf5 activating transcription factor 5 acts_upstream_of_or_within ISO MGI:5467393 (PMID:23090999) RGD PMID:23090999 NCBI chr 1:95,295,602...95,299,755
Ensembl chr 1:95,295,610...95,299,707
JBrowse link
G Dicer1 dicer 1 ribonuclease III acts_upstream_of_or_within ISO (PMID:18184563) RGD PMID:18184563 NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
JBrowse link
G Dlx5 distal-less homeobox 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2180475 (PMID:25937343)
Ensembl
RGD
PMID:25937343 GO_REF:0000107 NCBI chr 4:34,999,139...35,003,504
Ensembl chr 4:34,999,139...35,003,407
JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:15543145)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:15543145 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:69,523,733...70,596,743
Ensembl chr 9:69,531,481...70,596,595
JBrowse link
G Gsx2 GS homeobox 2 acts_upstream_of_or_within ISO MGI:2150162 (PMID:11060228) RGD PMID:11060228 NCBI chr14:33,123,799...33,126,151
Ensembl chr14:33,124,381...33,126,105
JBrowse link
G Mir200a microRNA 200a acts_upstream_of_or_within ISO (PMID:25937343) RGD PMID:25937343 NCBI chr 5:166,648,494...166,648,582 JBrowse link
G Mir200b microRNA 200b acts_upstream_of_or_within ISO (PMID:25937343) RGD PMID:25937343 NCBI chr 5:166,649,272...166,649,366
Ensembl chr 5:166,649,272...166,649,366
JBrowse link
G Mir200c microRNA 200c acts_upstream_of_or_within ISO (PMID:25937343) RGD PMID:25937343 NCBI chr 4:157,523,679...157,523,747 JBrowse link
G Mir9-3 microRNA 9-3 acts_upstream_of_or_within ISO (PMID:25937343) RGD PMID:25937343 NCBI chr 1:133,440,049...133,440,138 JBrowse link
G Sall1 spalt-like transcription factor 1 involved_in ISO (PMID:18024993) RGD PMID:18024993 NCBI chr19:18,005,782...18,022,705
Ensembl chr19:18,007,503...18,022,705
JBrowse link
G Uncx UNC homeobox involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1928812 (PMID:20692344)
Ensembl
RGD
PMID:20692344 GO_REF:0000107 NCBI chr12:15,092,779...15,097,300
Ensembl chr12:15,092,784...15,097,300
JBrowse link
olfactory bulb mitral cell layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ogdh oxoglutarate dehydrogenase involved_in IEA
ISO
GO_REF:0000107
(PMID:16901643)
Ensembl
RGD
PMID:16901643 GO_REF:0000107 NCBI chr14:81,150,021...81,217,479
Ensembl chr14:81,150,091...81,217,479
JBrowse link
G Pax6 paired box 6 IMP RGD PMID:14736749 RGD:8552333 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
JBrowse link
G Sall1 spalt-like transcription factor 1 involved_in ISO (PMID:18024993) RGD PMID:18024993 NCBI chr19:18,005,782...18,022,705
Ensembl chr19:18,007,503...18,022,705
JBrowse link
olfactory cortex development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1a2 ATPase Na+/K+ transporting subunit alpha 2 acts_upstream_of_or_within ISO (PMID:12805306) RGD PMID:12805306 NCBI chr13:84,729,597...84,754,544
Ensembl chr13:84,729,601...84,754,544
JBrowse link
olfactory lobe development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf5 activating transcription factor 5 acts_upstream_of_or_within ISO MGI:5467393 (PMID:23090999) RGD PMID:23090999 NCBI chr 1:95,295,602...95,299,755
Ensembl chr 1:95,295,610...95,299,707
JBrowse link
G Htt huntingtin acts_upstream_of_or_within ISO MGI:2675580 (PMID:12926013) RGD PMID:12926013 NCBI chr14:75,845,836...75,996,094
Ensembl chr14:75,845,836...75,995,070
JBrowse link
G Sema7a semaphorin 7A (John Milton Hagen blood group) acts_upstream_of_or_within ISO MGI:2683867 (PMID:12879062) RGD PMID:12879062 NCBI chr 8:58,348,448...58,370,536
Ensembl chr 8:58,348,448...58,370,536
JBrowse link
pallium cell proliferation in forebrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Igf2bp1 insulin-like growth factor 2 mRNA binding protein 1 acts_upstream_of_or_within ISO MGI:3043746 (PMID:24192035) RGD PMID:24192035 NCBI chr10:80,908,300...80,951,097
Ensembl chr10:80,908,076...80,951,129
JBrowse link
pallium development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO MGI:1857843|MGI:2150348 (PMID:16613831) RGD PMID:16613831 NCBI chr 1:244,584,477...244,590,578
Ensembl chr 1:244,584,652...244,590,359
JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856276 (PMID:10409502) RGD PMID:10409502 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
JBrowse link
G Pax6 paired box 6 acts_upstream_of_or_within ISO MGI:1856158 (PMID:11124115) RGD PMID:11124115 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
JBrowse link
postnatal olfactory bulb interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgfr1 Fibroblast growth factor receptor 1 IMP RGD PMID:20083104 RGD:2325172 NCBI chr16:66,491,930...66,547,161
Ensembl chr16:66,494,042...66,547,350
JBrowse link
putamen development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp2 forkhead box P2 involved_in ISO
IEA
(PMID:11872605)
GO_REF:0000107
RGD
Ensembl
PMID:11872605 GO_REF:0000107 NCBI chr 4:43,133,827...43,712,442
Ensembl chr 4:43,133,912...43,711,683
JBrowse link
pyramidal neuron migration to cerebral cortex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Disc1 DISC1 scaffold protein IMP RGD PMID:16299498 RGD:5509783 NCBI chr19:53,014,201...53,223,617
Ensembl chr19:53,014,616...53,219,778
JBrowse link
G Foxg1 forkhead box G1 acts_upstream_of_or_within ISO (PMID:22726835) RGD PMID:22726835 NCBI chr 6:66,674,797...66,677,611
Ensembl chr 6:66,666,587...66,678,607
JBrowse link
G Zmiz1 zinc finger, MIZ-type containing 1 involved_in ISO (PMID:30639322) RGD PMID:30639322 NCBI chr16:1,027,083...1,232,616
Ensembl chr16:1,027,325...1,232,597
JBrowse link
regulation of timing of subpallium neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:1857470 (PMID:9876181) RGD PMID:9876181 NCBI chr 7:21,903,136...21,906,003
Ensembl chr 7:21,903,126...21,905,993
JBrowse link
striatal medium spiny neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl11b BCL11 transcription factor B acts_upstream_of_or_within ISO MGI:2663971 (PMID:18199763) RGD PMID:18199763 NCBI chr 6:126,834,531...126,927,720
Ensembl chr 6:126,834,531...126,928,224
JBrowse link
G Inhba inhibin subunit beta A involved_in ISO (PMID:25804741) RGD PMID:25804741 NCBI chr17:49,091,635...49,111,573
Ensembl chr17:49,095,920...49,108,982
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:21423165)
GO_REF:0000024
Ensembl
RGD
BHF-UCL
PMID:21423165 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:120,568,707...120,630,796
Ensembl chr 7:120,570,402...120,630,374
JBrowse link
G Zswim6 zinc finger, SWIM-type containing 6 involved_in ISO (PMID:28433741) RGD PMID:28433741 NCBI chr 2:39,211,131...39,378,877
Ensembl chr 2:39,212,949...39,378,924
JBrowse link
striatum development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bbs1 Bardet-Biedl syndrome 1 acts_upstream_of_or_within ISO MGI:3767672 (PMID:18032602) RGD PMID:18032602 NCBI chr 1:202,184,812...202,204,118
Ensembl chr 1:202,186,125...202,204,086
JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 acts_upstream_of_or_within ISO MGI:3521669 (PMID:18032602) RGD PMID:18032602 NCBI chr19:10,909,653...10,944,998
Ensembl chr19:10,909,619...10,944,993
JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within ISO MGI:3045473 (PMID:18032602) RGD PMID:18032602 NCBI chr 8:59,731,912...59,765,408
Ensembl chr 8:59,731,912...59,765,607
JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (PMID:18179893) RGD PMID:18179893 NCBI chr 4:74,109,455...76,366,434
Ensembl chr 4:74,109,472...76,362,027
JBrowse link
G Drd1 dopamine receptor D1 acts_upstream_of_or_within
involved_in
IEP
ISO
IEA
MGI:2181426|MGI:3707260 (PMID:17360497)
GO_REF:0000107
RGD
Ensembl
PMID:17360497 PMID:22015925 GO_REF:0000107, RGD:7248608 NCBI chr17:10,540,440...10,544,971
Ensembl chr17:10,540,558...10,545,002
JBrowse link
G Drd2 dopamine receptor D2 IEP RGD PMID:22015925 RGD:7248608 NCBI chr 8:58,605,403...58,669,339
Ensembl chr 8:49,708,927...49,772,875
JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 IEP RGD PMID:18565716 RGD:13204724 NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715
JBrowse link
G Foxp1 forkhead box P1 IEP RGD PMID:12815709 RGD:11536004 NCBI chr 4:131,559,599...132,155,092
Ensembl chr 4:131,564,756...132,112,258
JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857299 (PMID:9886073)
Ensembl
RGD
PMID:9886073 GO_REF:0000107 NCBI chr  X:132,736,175...132,768,149
Ensembl chr  X:132,736,096...132,768,154
JBrowse link
G Htt huntingtin acts_upstream_of_or_within ISO MGI:2177751|MGI:2177753|MGI:2177757 (PMID:11030759), (PMID:17715336) RGD PMID:11030759 PMID:17715336 NCBI chr14:75,845,836...75,996,094
Ensembl chr14:75,845,836...75,995,070
JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 IEP RGD PMID:18272292 RGD:13462055 NCBI chr 7:122,826,696...122,987,711
Ensembl chr 7:122,826,696...122,987,703
JBrowse link
G Mecp2 methyl CpG binding protein 2 IEP RGD PMID:12605461 RGD:12790706 NCBI chr  X:151,781,177...151,844,687
Ensembl chr  X:151,789,930...151,844,689
JBrowse link
G Mkks MKKS centrosomal shuttling protein acts_upstream_of_or_within ISO MGI:3526444 (PMID:18032602) RGD PMID:18032602 NCBI chr 3:124,201,877...124,221,142
Ensembl chr 3:124,201,877...124,220,162
JBrowse link
G Ogdh oxoglutarate dehydrogenase involved_in IEA
ISO
GO_REF:0000107
(PMID:16901643)
Ensembl
RGD
PMID:16901643 GO_REF:0000107 NCBI chr14:81,150,021...81,217,479
Ensembl chr14:81,150,091...81,217,479
JBrowse link
G Rarb retinoic acid receptor, beta acts_upstream_of_or_within ISO MGI:1857851 (PMID:18443282) RGD PMID:18443282 NCBI chr15:8,700,533...9,051,288
Ensembl chr15:8,406,492...9,051,288
JBrowse link
G Secisbp2 SECIS binding protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2181426|MGI:5583885 (PMID:24844465)
Ensembl
RGD
PMID:24844465 GO_REF:0000107 NCBI chr17:13,538,513...13,569,573
Ensembl chr17:13,538,513...13,569,523
JBrowse link
G Slc7a11 solute carrier family 7 member 11 acts_upstream_of_or_within ISO MGI:1857061 (PMID:17035536) RGD PMID:17035536 NCBI chr 2:134,382,002...134,517,622
Ensembl chr 2:133,963,107...134,517,536
JBrowse link
G Slitrk5 SLIT and NTRK-like family, member 5 acts_upstream_of_or_within ISO MGI:4459459 (PMID:20418887) RGD PMID:20418887 NCBI chr15:88,848,123...88,858,809
Ensembl chr15:88,847,535...88,856,836
JBrowse link
subpallium development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlx1 distal-less homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:94902|MGI:95843 (PMID:23042297)
Ensembl
RGD
PMID:23042297 GO_REF:0000107 NCBI chr 3:56,356,190...56,360,780
Ensembl chr 3:56,356,190...56,360,780
JBrowse link
G Dlx2 distal-less homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:94901|MGI:95843 (PMID:23042297)
Ensembl
RGD
PMID:23042297 GO_REF:0000107 NCBI chr 3:56,370,238...56,373,581
Ensembl chr 3:56,370,483...56,373,597
JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO MGI:1857843|MGI:2150348 (PMID:16613831) RGD PMID:16613831 NCBI chr 1:244,584,477...244,590,578
Ensembl chr 1:244,584,652...244,590,359
JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856282 (PMID:20943929) RGD PMID:20943929 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
JBrowse link
G Gsx2 GS homeobox 2 acts_upstream_of_or_within ISO MGI:94901|MGI:94902 (PMID:23042297) RGD PMID:23042297 NCBI chr14:33,123,799...33,126,151
Ensembl chr14:33,124,381...33,126,105
JBrowse link
subpallium neuron fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:1857470 (PMID:9876181) RGD PMID:9876181 NCBI chr 7:21,903,136...21,906,003
Ensembl chr 7:21,903,126...21,905,993
JBrowse link
G Gsx2 GS homeobox 2 acts_upstream_of_or_within ISO MGI:2150162 (PMID:11124115) RGD PMID:11124115 NCBI chr14:33,123,799...33,126,151
Ensembl chr14:33,124,381...33,126,105
JBrowse link
superior temporal gyrus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cntnap2 contactin associated protein 2 involved_in ISO (PMID:18179893) RGD PMID:18179893 NCBI chr 4:74,109,455...76,366,434
Ensembl chr 4:74,109,472...76,362,027
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in ISO
IEA
(PMID:19581563)
GO_REF:0000107
RGD
Ensembl
PMID:19581563 GO_REF:0000107 NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
JBrowse link
tangential migration from the subventricular zone to the olfactory bulb term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgfr1 Fibroblast growth factor receptor 1 IMP RGD PMID:20083104 RGD:2325172 NCBI chr16:66,491,930...66,547,161
Ensembl chr16:66,494,042...66,547,350
JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in ISO (PMID:21168496) RGD PMID:21168496 NCBI chr 7:122,826,696...122,987,711
Ensembl chr 7:122,826,696...122,987,703
JBrowse link
G Ogdh oxoglutarate dehydrogenase involved_in IEA
ISO
GO_REF:0000107
(PMID:16901643)
Ensembl
RGD
PMID:16901643 GO_REF:0000107 NCBI chr14:81,150,021...81,217,479
Ensembl chr14:81,150,091...81,217,479
JBrowse link
G Slit1 slit guidance ligand 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2179459 (PMID:14960623)
Ensembl
RGD
PMID:14960623 GO_REF:0000107 NCBI chr 1:240,409,559...240,558,127
Ensembl chr 1:240,409,561...240,558,127
JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO MGI:2181426|MGI:2385464 (PMID:15837932) RGD PMID:15837932 NCBI chr 9:14,426,453...14,435,734
Ensembl chr 9:14,426,472...14,435,733
JBrowse link
telencephalon cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cxcl12 C-X-C motif chemokine ligand 12 IMP RGD PMID:16971524 RGD:2306584 NCBI chr 4:150,388,326...150,401,173
Ensembl chr 4:150,388,325...150,401,168
JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 IMP RGD PMID:16971524 RGD:2306584 NCBI chr13:40,077,976...40,081,883
Ensembl chr13:40,077,976...40,081,883
JBrowse link
G Foxb1 forkhead box B1 involved_in ISO (PMID:19046377) RGD PMID:19046377 NCBI chr 8:70,407,221...70,409,841
Ensembl chr 8:70,408,186...70,409,781
JBrowse link
G Nkx2-1 NK2 homeobox 1 acts_upstream_of_or_within ISO MGI:3653645 (PMID:18786357), (PMID:20181579) RGD PMID:18786357 PMID:20181579 NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791
JBrowse link
G Slit1 slit guidance ligand 1 acts_upstream_of_or_within ISO MGI:1315205 (PMID:14960623) RGD PMID:14960623 NCBI chr 1:240,409,559...240,558,127
Ensembl chr 1:240,409,561...240,558,127
JBrowse link
G Slit2 slit guidance ligand 2 acts_upstream_of_or_within ISO MGI:1315203 (PMID:14960623) RGD PMID:14960623 NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
JBrowse link
G Tnr tenascin R involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2154583 (PMID:15034584)
Ensembl
RGD
PMID:15034584 GO_REF:0000107 NCBI chr13:71,751,714...72,172,731
Ensembl chr13:72,091,585...72,167,641
JBrowse link
telencephalon regionalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp2 bone morphogenetic protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:96785 (PMID:11719201)
Ensembl
RGD
PMID:11719201 GO_REF:0000107 NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:96785 (PMID:11719201), (PMID:16855091)
Ensembl
RGD
PMID:11719201 PMID:16855091 GO_REF:0000107 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
JBrowse link
G Gsx2 GS homeobox 2 acts_upstream_of_or_within ISO MGI:2150162 (PMID:18701439) RGD PMID:18701439 NCBI chr14:33,123,799...33,126,151
Ensembl chr14:33,124,381...33,126,105
JBrowse link
G Lhx2 LIM homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1890208|MGI:88177|MGI:88180 (PMID:11719201)
Ensembl
RGD
PMID:11719201 GO_REF:0000107 NCBI chr 3:22,113,619...22,143,909
Ensembl chr 3:22,126,007...22,143,908
JBrowse link
G Otx2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO MGI:2178753|MGI:3665330 (PMID:26166575) RGD PMID:26166575 NCBI chr15:21,942,233...21,953,034
Ensembl chr15:21,943,191...21,953,416
JBrowse link
G Pax6 paired box 6 acts_upstream_of_or_within ISO MGI:1856155 (PMID:18701439) RGD PMID:18701439 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within
involved_in
IMP
ISO
IEA
MGI:1857796 (PMID:11060228)
GO_REF:0000107
RGD
Ensembl
PMID:11060228 PMID:9811591 GO_REF:0000107, RGD:2306311 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
G Six3 SIX homeobox 3 involved_in ISO (PMID:18694563) RGD PMID:18694563 NCBI chr 6:9,039,017...9,043,336
Ensembl chr 6:9,036,434...9,053,301
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20536
    developmental process 7109
      anatomical structure development 6611
        telencephalon development 386
          anterior commissure morphogenesis 8
          corpus callosum development + 38
          lateral ventricle development 14
          olfactory lobe development + 55
          pallium development + 273
          subpallium development + 30
          telencephalon cell migration + 71
          telencephalon regionalization + 16
Path 2
Term Annotations click to browse term
  biological_process 20536
    developmental process 7109
      anatomical structure development 6611
        multicellular organism development 5330
          system development 4612
            nervous system development 2862
              central nervous system development 1216
                brain development 903
                  forebrain development 559
                    telencephalon development 386
                      anterior commissure morphogenesis 8
                      corpus callosum development + 38
                      lateral ventricle development 14
                      olfactory lobe development + 55
                      pallium development + 273
                      subpallium development + 30
                      telencephalon cell migration + 71
                      telencephalon regionalization + 16
paths to the root