ONTOLOGY REPORT - ANNOTATIONS
Term: telencephalon development
Accession: GO:0021537
browse the term
Definition: The process whose specific outcome is the progression of the telencephalon over time, from its formation to the mature structure. The telencephalon is the paired anteriolateral division of the prosencephalon plus the lamina terminalis from which the olfactory lobes, cerebral cortex, and subcortical nuclei are derived.
Synonyms: exact_synonym: cerebrum development
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Afdn
afadin, adherens junction formation factor
acts_upstream_of_or_within
ISO
MGI:95387 (PMID:25100583)
RGD
PMID:25100583
NCBI chr 1:53,905,344...54,034,216
Ensembl chr 1:53,905,373...54,034,216
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Avpr1a
arginine vasopressin receptor 1A
IEP
RGD
PMID:11021977
RGD:2304223
NCBI chr 7:58,114,306...58,118,230
Ensembl chr 7:58,114,284...58,122,215
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Avpr2
arginine vasopressin receptor 2
IEP
RGD
PMID:11021977
RGD:2304223
NCBI chr X:151,633,501...151,636,155
Ensembl chr X:151,633,522...151,635,989
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Bmp2
bone morphogenetic protein 2
acts_upstream_of_or_within
ISO
(PMID:9187146)
RGD
PMID:9187146
NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
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Bmp4
bone morphogenetic protein 4
acts_upstream_of_or_within
ISO
(PMID:9187146)
RGD
PMID:9187146
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
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Cdh2
cadherin 2
acts_upstream_of_or_within
ISO
MGI:95387 (PMID:25100583)
RGD
PMID:25100583
NCBI chr18:7,776,704...7,990,934
Ensembl chr18:7,776,704...7,990,167
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Cdk5
cyclin-dependent kinase 5
acts_upstream_of_or_within
ISO
MGI:1928281|MGI:3043819 (PMID:18032654)
RGD
PMID:18032654
NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
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Emx1
empty spiracles homeobox 1
acts_upstream_of_or_within
ISO
MGI:1314653|MGI:88355 (PMID:25100583)
RGD
PMID:25100583
NCBI chr 4:117,725,148...117,741,616
Ensembl chr 4:117,725,155...117,741,613
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Erbb4
erb-b2 receptor tyrosine kinase 4
IEP
RGD
PMID:12571115
RGD:2290000
NCBI chr 9:69,523,733...70,596,743
Ensembl chr 9:69,531,481...70,596,595
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Fas
Fas cell surface death receptor
IEP
RGD
PMID:10024361
RGD:8662883
NCBI chr 1:231,798,963...231,832,591
Ensembl chr 1:231,798,960...231,832,591
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Fezf1
Fez family zinc finger 1
involved_in
ISO
(PMID:20431123)
RGD
PMID:20431123
NCBI chr 4:51,762,751...51,766,078
Ensembl chr 4:51,762,751...51,766,078
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Fezf2
Fez family zinc finger 2
acts_upstream_of_or_within involved_in
ISO
MGI:104876|MGI:1920441 (PMID:20431123)
RGD
PMID:20431123
NCBI chr15:12,768,614...12,777,554
Ensembl chr15:12,773,762...12,777,554
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Fgf8
fibroblast growth factor 8
acts_upstream_of_or_within
ISO
MGI:1857843|MGI:2150348 (PMID:16613831)
RGD
PMID:16613831
NCBI chr 1:244,584,477...244,590,578
Ensembl chr 1:244,584,652...244,590,359
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Gli3
GLI family zinc finger 3
acts_upstream_of_or_within
ISO
MGI:1856276 (PMID:10625551), (PMID:19036983), (PMID:19048639)
RGD
PMID:10625551 PMID:19036983 PMID:19048639
NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
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Gmppa
GDP-mannose pyrophosphorylase A
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:33755596) GO_REF:0000107
RGD Ensembl
PMID:33755596
GO_REF:0000107
NCBI chr 9:76,926,724...76,934,274
Ensembl chr 9:76,926,739...76,934,269
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Hes1
hes family bHLH transcription factor 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:104876|MGI:2149672 (PMID:18579678), (PMID:19050759)
Ensembl RGD
PMID:18579678 PMID:19050759
GO_REF:0000107
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
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Hes5
hes family bHLH transcription factor 5
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:104853|MGI:1859823|MGI:1920441 (PMID:18579678), (PMID:20431123)
UniProt RGD
PMID:18579678 PMID:20431123
GO_REF:0000024
NCBI chr 5:165,522,138...165,523,684
Ensembl chr 5:165,522,234...165,523,001
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Ift88
intraflagellar transport 88
acts_upstream_of_or_within
ISO
MGI:3823090 (PMID:19036983)
RGD
PMID:19036983
NCBI chr15:31,573,325...31,666,068
Ensembl chr15:31,573,376...31,672,147
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Kat2a
lysine acetyltransferase 2A
acts_upstream_of_or_within
ISO
MGI:3711317 (PMID:17325035)
RGD
PMID:17325035
NCBI chr10:85,632,216...85,640,561
Ensembl chr10:85,632,216...85,640,166
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Lhx1
LIM homeobox 1
involved_in
ISO
(PMID:7909549)
RGD
PMID:7909549
NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617
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Lhx2
LIM homeobox 2
acts_upstream_of_or_within
ISO
MGI:1890208|MGI:4399044 (PMID:11165475), (PMID:11719201), (PMID:17493606), (PMID:19820705)
RGD
PMID:11165475 PMID:11719201 PMID:17493606 PMID:19820705
NCBI chr 3:22,113,619...22,143,909
Ensembl chr 3:22,126,007...22,143,908
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Ncor2
nuclear receptor co-repressor 2
acts_upstream_of_or_within
ISO
MGI:3765904 (PMID:17928865)
RGD
PMID:17928865
NCBI chr12:31,466,418...31,628,319
Ensembl chr12:31,466,412...31,628,319
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Nkx2-1
NK2 homeobox 1
acts_upstream_of_or_within
ISO
MGI:3653645 (PMID:18786356)
RGD
PMID:18786356
NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791
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Nrgn
neurogranin
IEP
RGD
PMID:8783271
RGD:9835396
NCBI chr 8:37,255,462...37,263,659
Ensembl chr 8:37,256,930...37,257,516
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Oxtr
oxytocin receptor
IEP
RGD
PMID:11021977
RGD:2304223
NCBI chr 4:145,598,549...145,614,674
Ensembl chr 4:145,599,561...145,614,674
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Pfdn1
prefoldin subunit 1
acts_upstream_of_or_within
ISO
MGI:3800373 (PMID:18566413)
RGD
PMID:18566413
NCBI chr18:28,014,145...28,067,148
Ensembl chr18:28,014,145...28,067,064
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Rfx4
regulatory factor X4
acts_upstream_of_or_within
ISO
MGI:3799278 (PMID:19887680)
RGD
PMID:19887680
NCBI chr 7:18,853,065...19,015,378
Ensembl chr 7:18,853,322...19,014,967
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Rpgrip1l
Rpgrip1-like
acts_upstream_of_or_within
ISO
MGI:3716208 (PMID:17558409)
RGD
PMID:17558409
NCBI chr19:15,692,189...15,785,083
Ensembl chr19:15,692,150...15,785,083
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Scn5a
sodium voltage-gated channel alpha subunit 5
IEP
RGD
PMID:22331407
RGD:6484221
NCBI chr 8:119,220,905...119,318,816
Ensembl chr 8:119,220,905...119,318,769
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Six3
SIX homeobox 3
acts_upstream_of_or_within involved_in
ISO
MGI:2450901 (PMID:18094027) (PMID:18694563)
RGD
PMID:18094027 PMID:18694563
NCBI chr 6:9,039,017...9,043,336
Ensembl chr 6:9,036,434...9,053,301
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Slc1a2
solute carrier family 1 member 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2449707 (PMID:9180080)
Ensembl RGD
PMID:9180080
GO_REF:0000107
NCBI chr 3:89,005,129...89,135,469
Ensembl chr 3:89,005,129...89,126,498
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Slc8a1
solute carrier family 8 member A1
IEP
RGD
PMID:12502534
RGD:2316981
NCBI chr 6:13,194,609...13,547,369
Ensembl chr 6:13,194,662...13,535,628
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Slc8a2
solute carrier family 8 member A2
IEP
RGD
PMID:12502534
RGD:2316981
NCBI chr 1:76,816,583...76,852,928
Ensembl chr 1:76,808,725...76,847,072
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Slc8a3
solute carrier family 8 member A3
IEP
RGD
PMID:11036162
RGD:2316983
NCBI chr 6:100,874,359...101,007,989
Ensembl chr 6:100,874,369...101,007,508
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Tctn1
tectonic family member 1
acts_upstream_of_or_within
ISO
MGI:3716885 (PMID:16357211)
RGD
PMID:16357211
NCBI chr12:34,309,795...34,347,190
Ensembl chr12:34,309,897...34,342,267
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Lrp8
LDL receptor related protein 8
involved_in
ISO
(PMID:18778775)
RGD
PMID:18778775
NCBI chr 5:122,563,468...122,635,434
Ensembl chr 5:122,563,453...122,631,352
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Bhlhe22
basic helix-loop-helix family, member e22
acts_upstream_of_or_within
ISO
MGI:4440742 (PMID:22284184)
RGD
PMID:22284184
NCBI chr 2:100,486,400...100,489,510
Ensembl chr 2:100,486,400...100,489,510
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Draxin
dorsal inhibitory axon guidance protein
involved_in
ISO
(PMID:23206892)
RGD
PMID:23206892
NCBI chr 5:158,530,149...158,563,457
Ensembl chr 5:158,530,342...158,564,483
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Fbxo45
F-box protein 45
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3849742 (PMID:19398581)
Ensembl RGD
PMID:19398581
GO_REF:0000107
NCBI chr11:68,551,430...68,567,053
Ensembl chr11:68,551,122...68,566,800
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Nfib
nuclear factor I/B
involved_in
ISS ISO
GO_REF:0000024 (PMID:19961580)
UniProt RGD
PMID:19961580
GO_REF:0000024
NCBI chr 5:96,759,208...96,974,001
Ensembl chr 5:96,764,653...96,975,479
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Nr2e1
nuclear receptor subfamily 2, group E, member 1
acts_upstream_of_or_within
ISO
MGI:2176490 (PMID:11997145)
RGD
PMID:11997145
NCBI chr20:46,050,134...46,071,257
Ensembl chr20:46,050,414...46,073,949
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Plxna4
plexin A4
acts_upstream_of_or_within
ISO
MGI:3578655 (PMID:15814794)
RGD
PMID:15814794
NCBI chr 4:60,720,246...61,162,206
Ensembl chr 4:60,720,255...61,162,206
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Tsku
tsukushi, small leucine rich proteoglycan
involved_in acts_upstream_of_or_within
IEA ISO ISS
GO_REF:0000107 (PMID:23206892) MGI:4867728 (PMID:21055390) GO_REF:0000024
Ensembl RGD UniProt
PMID:21055390 PMID:23206892
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:152,660,259...152,671,682
Ensembl chr 1:152,656,693...152,672,588
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Wdr47
WD repeat domain 47
acts_upstream_of_or_within
ISO
MGI:4433065|MGI:6102912 (PMID:29078390)
RGD
PMID:29078390
NCBI chr 2:196,226,757...196,287,739
Ensembl chr 2:196,205,238...196,287,739
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Foxp2
forkhead box P2
involved_in
ISO IEA
(PMID:11872605) GO_REF:0000107
RGD Ensembl
PMID:11872605
GO_REF:0000107
NCBI chr 4:43,133,827...43,712,442
Ensembl chr 4:43,133,912...43,711,683
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Bmerb1
bMERB domain containing 1
acts_upstream_of
ISO
(PMID:25099998)
RGD
PMID:25099998
NCBI chr10:1,779,834...1,946,586
Ensembl chr10:1,779,835...1,946,575
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Dab2ip
DAB2 interacting protein
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:23056358) GO_REF:0000107
UniProt RGD Ensembl
PMID:23056358
GO_REF:0000024 GO_REF:0000107
NCBI chr 3:18,915,290...19,086,282
Ensembl chr 3:18,915,290...19,086,280
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Dab1
DAB adaptor protein 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1856801 (PMID:15091337)
Ensembl RGD
PMID:15091337
GO_REF:0000107
NCBI chr 5:118,392,953...119,513,625
Ensembl chr 5:119,140,533...119,510,552
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Dab1
DAB adaptor protein 1
acts_upstream_of_or_within
ISO
MGI:3050637 (PMID:15249135)
RGD
PMID:15249135
NCBI chr 5:118,392,953...119,513,625
Ensembl chr 5:119,140,533...119,510,552
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Dixdc1
DIX domain containing 1
involved_in
ISO
(PMID:20624590)
RGD
PMID:20624590
NCBI chr 8:51,007,835...51,081,191
Ensembl chr 8:51,007,838...51,081,090
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Efhc1
EF-hand domain containing 1
involved_in
ISO
(PMID:22926142)
RGD
PMID:22926142
NCBI chr 9:23,375,815...23,414,283
Ensembl chr 9:23,375,840...23,414,283
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Egfr
epidermal growth factor receptor
acts_upstream_of_or_within
ISO
MGI:1856402 (PMID:7618084)
RGD
PMID:7618084
NCBI chr14:91,176,979...91,349,722
Ensembl chr14:91,177,067...91,344,382
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Fgf13
fibroblast growth factor 13
involved_in
ISS ISO
GO_REF:0000024 (PMID:22726441)
UniProt RGD
PMID:22726441
GO_REF:0000024
NCBI chr X:137,276,498...137,800,056
Ensembl chr X:137,276,511...137,800,391
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Htr6
5-hydroxytryptamine receptor 6
involved_in
ISS ISO
GO_REF:0000024 (PMID:25078650)
UniProt RGD
PMID:25078650
GO_REF:0000024
NCBI chr 5:151,295,269...151,312,853
Ensembl chr 5:151,296,662...151,311,912
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Lrp6
LDL receptor related protein 6
acts_upstream_of_or_within
ISO
MGI:2156191 (PMID:16920270)
RGD
PMID:16920270
NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497
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Nkx2-1
NK2 homeobox 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:18786357)
Ensembl RGD
PMID:18786357
GO_REF:0000107
NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791
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Pex13
peroxisomal biogenesis factor 13
acts_upstream_of_or_within
ISO
MGI:2384515 (PMID:12897163)
RGD
PMID:12897163
NCBI chr14:97,602,829...97,621,233
Ensembl chr14:97,603,539...97,621,262
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Pex5
peroxisomal biogenesis factor 5
acts_upstream_of_or_within involved_in
ISO IEA
MGI:2154454 (PMID:10653000), (PMID:9288097) GO_REF:0000107
RGD Ensembl
PMID:9288097 PMID:10653000
GO_REF:0000107
NCBI chr 4:157,270,671...157,296,432
Ensembl chr 4:157,270,672...157,296,431
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Psen1
presenilin 1
acts_upstream_of_or_within
ISO
MGI:1857974 (PMID:16079160)
RGD
PMID:16079160
NCBI chr 6:103,323,052...103,375,088
Ensembl chr 6:103,323,120...103,371,650
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Rhoa
ras homolog family member A
acts_upstream_of_or_within
ISO
MGI:4950374 (PMID:22405202)
RGD
PMID:22405202
NCBI chr 8:108,991,926...109,025,746
Ensembl chr 8:108,991,954...109,025,746
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Afdn
afadin, adherens junction formation factor
acts_upstream_of_or_within
ISO
MGI:5607284|MGI:95387 (PMID:25100583)
RGD
PMID:25100583
NCBI chr 1:53,905,344...54,034,216
Ensembl chr 1:53,905,373...54,034,216
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Ahsg
alpha-2-HS-glycoprotein
IEP
RGD
PMID:2423927
RGD:1626077
NCBI chr11:78,121,388...78,127,998
Ensembl chr11:78,117,918...78,145,999
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Akirin2
akirin 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:27871306)
UniProt RGD
PMID:27871306
GO_REF:0000024
NCBI chr 5:49,108,231...49,122,566
Ensembl chr 5:49,108,220...49,122,568
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Ascl1
achaete-scute family bHLH transcription factor 1
acts_upstream_of_or_within
ISO
MGI:1857470 (PMID:17678855)
RGD
PMID:17678855
NCBI chr 7:21,903,136...21,906,003
Ensembl chr 7:21,903,126...21,905,993
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Aspm
assembly factor for spindle microtubules
acts_upstream_of_or_within
ISO
MGI:5573152 (PMID:24220505)
RGD
PMID:24220505
NCBI chr13:51,074,849...51,123,755
Ensembl chr13:51,074,849...51,123,755
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Atg7
autophagy related 7
acts_upstream_of_or_within
ISO
MGI:2386545|MGI:3587769 (PMID:16625205)
RGD
PMID:16625205
NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
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Atic
5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase
IEP
RGD
PMID:7057182
RGD:2301991
NCBI chr 9:73,164,846...73,184,897
Ensembl chr 9:73,164,846...73,184,889
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Atoh1
atonal bHLH transcription factor 1
acts_upstream_of_or_within
ISO
MGI:2155983 (PMID:16325379)
RGD
PMID:16325379
NCBI chr 4:93,912,068...93,914,163
Ensembl chr 4:93,912,068...93,914,154
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Atp1a3
ATPase Na+/K+ transporting subunit alpha 3
acts_upstream_of_or_within
IEP ISO
MGI:4356167 (PMID:23527305)
RGD
PMID:23527305 PMID:19362129
RGD:11576282
NCBI chr 1:80,572,790...80,601,936
Ensembl chr 1:80,572,796...80,601,918
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Bad
BCL2-associated agonist of cell death
IEP
RGD
PMID:9813151
RGD:2315711
NCBI chr 1:204,133,502...204,142,829
Ensembl chr 1:204,131,501...204,142,823
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Bax
BCL2 associated X, apoptosis regulator
acts_upstream_of_or_within
IEP ISO
MGI:1857429 (PMID:15342910)
RGD
PMID:15342910 PMID:9813151
RGD:2315711
NCBI chr 1:105,076,472...105,081,906
Ensembl chr 1:95,938,808...95,945,368
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Bbs1
Bardet-Biedl syndrome 1
acts_upstream_of_or_within
ISO
MGI:3767672 (PMID:18032602)
RGD
PMID:18032602
NCBI chr 1:202,184,812...202,204,118
Ensembl chr 1:202,186,125...202,204,086
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Bbs2
Bardet-Biedl syndrome 2
acts_upstream_of_or_within
ISO
MGI:3521669 (PMID:18032602)
RGD
PMID:18032602
NCBI chr19:10,909,653...10,944,998
Ensembl chr19:10,909,619...10,944,993
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Bbs4
Bardet-Biedl syndrome 4
acts_upstream_of_or_within
ISO
MGI:3045473 (PMID:18032602)
RGD
PMID:18032602
NCBI chr 8:59,731,912...59,765,408
Ensembl chr 8:59,731,912...59,765,607
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Bcl2
BCL2, apoptosis regulator
IEP
RGD
PMID:9813151
RGD:2315711
NCBI chr13:23,204,464...23,366,900
Ensembl chr13:22,684,989...22,853,743 Ensembl chr13:22,684,989...22,853,743
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Bcl2a1
BCL2-related protein A1
IEP
RGD
PMID:9813151
RGD:2315711
NCBI chr 8:89,716,914...89,724,998
Ensembl chr 8:89,716,914...89,724,998
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Bcl2l1
Bcl2-like 1
IEP
RGD
PMID:9813151
RGD:2315711
NCBI chr 3:141,253,508...141,304,582
Ensembl chr 3:141,253,523...141,303,479 Ensembl chr 1:141,253,523...141,303,479
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Bnip3
BCL2 interacting protein 3
IEP
RGD
PMID:16765336
RGD:11561980
NCBI chr 1:193,708,164...193,725,348
Ensembl chr 1:193,708,167...193,725,359
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Btbd3
BTB domain containing 3
involved_in
IBA ISO
GO_REF:0000033 (PMID:24179155)
GO_Central RGD
PMID:24179155
GO_REF:0000033
NCBI chr 3:125,591,427...125,621,660
Ensembl chr 3:125,591,490...125,619,038
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Cacna1c
calcium voltage-gated channel subunit alpha1 C
IEP
RGD
PMID:22473424
RGD:10411906
NCBI chr 4:151,764,138...152,379,454
Ensembl chr 4:151,764,138...152,379,648
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Cask
calcium/calmodulin dependent serine protein kinase
IEP
RGD
PMID:10749215
RGD:11576295
NCBI chr X:8,899,500...9,243,014
Ensembl chr X:8,899,833...9,238,694
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Ccdc39
coiled-coil domain 39 molecular ruler complex subunit
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:34992132) GO_REF:0000107
RGD Ensembl
PMID:34992132
GO_REF:0000107
NCBI chr 2:116,665,651...116,703,354
Ensembl chr 2:116,665,261...116,703,350
G
Ccdc85c
coiled-coil domain containing 85C
involved_in
ISO
(PMID:22056358)
RGD
PMID:22056358
NCBI chr 6:127,113,440...127,184,328
Ensembl chr 6:127,113,442...127,184,371
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Cdh2
cadherin 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:95387 (PMID:25100583)
Ensembl RGD
PMID:25100583
GO_REF:0000107
NCBI chr18:7,776,704...7,990,934
Ensembl chr18:7,776,704...7,990,167
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Cdk5
cyclin-dependent kinase 5
acts_upstream_of_or_within
ISO
MGI:1861809 (PMID:9698328)
RGD
PMID:9698328
NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
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Cdon
cell adhesion associated, oncogene regulated
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2653120 (PMID:16648472)
Ensembl RGD
PMID:16648472
GO_REF:0000107
NCBI chr 8:33,775,123...33,861,635
Ensembl chr 8:33,806,183...33,859,033
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Celf1
CUGBP, Elav-like family member 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:32245946)
Ensembl RGD
PMID:32245946
GO_REF:0000107
NCBI chr 3:76,924,591...76,999,429
Ensembl chr 3:76,924,613...76,999,426
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Cep120
centrosomal protein 120
acts_upstream_of_or_within
ISO
(PMID:17920017)
RGD
PMID:17920017
NCBI chr18:47,127,979...47,189,964
Ensembl chr18:47,127,981...47,189,964
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Cntnap2
contactin associated protein 2
involved_in
ISO
(PMID:18179893), (PMID:18987363)
RGD
PMID:18179893 PMID:18987363
NCBI chr 4:74,109,455...76,366,434
Ensembl chr 4:74,109,472...76,362,027
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Col3a1
collagen type III alpha 1 chain
involved_in
ISS ISO
GO_REF:0000024 (PMID:21768377)
UniProt RGD
PMID:21768377
GO_REF:0000024
NCBI chr 9:47,374,611...47,410,547
Ensembl chr 9:47,374,593...47,410,547
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Crk
CRK proto-oncogene, adaptor protein
acts_upstream_of_or_within
ISO
MGI:104686 (PMID:19074029)
RGD
PMID:19074029
NCBI chr10:60,530,469...60,556,703
Ensembl chr10:60,530,464...60,553,406
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Crkl
CRK like proto-oncogene, adaptor protein
acts_upstream_of_or_within
ISO
MGI:88508 (PMID:19074029)
RGD
PMID:19074029
NCBI chr11:83,528,788...83,563,214
Ensembl chr11:83,526,530...83,563,238
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Crnkl1
crooked neck pre-mRNA splicing factor 1
IEP
RGD
PMID:12801913
RGD:634609
NCBI chr 3:133,338,593...133,354,329
Ensembl chr 3:133,337,039...133,354,302 Ensembl chr 6:133,337,039...133,354,302
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Csnk2a1
casein kinase 2 alpha 1
IEP
RGD
PMID:7735332
RGD:11565823
NCBI chr 3:140,709,984...140,756,757
Ensembl chr 3:140,709,991...140,756,696
G
Csnk2a2
casein kinase 2 alpha 2
IEP
RGD
PMID:7735332
RGD:11565823
NCBI chr19:9,556,443...9,596,080
Ensembl chr19:9,556,260...9,596,080
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Dab1
DAB adaptor protein 1
IEP
RGD
PMID:20368265
RGD:2324624
NCBI chr 5:118,392,953...119,513,625
Ensembl chr 5:119,140,533...119,510,552
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Dcc
DCC netrin 1 receptor
IEP
RGD
PMID:22473424
RGD:10411906
NCBI chr18:64,868,987...65,972,783
Ensembl chr18:64,873,898...65,972,740
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Dicer1
dicer 1 ribonuclease III
acts_upstream_of_or_within
ISO
MGI:3641051 (PMID:18997113)
RGD
PMID:18997113
NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
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Dlg1
discs large MAGUK scaffold protein 1
IEP
RGD
PMID:14597197
RGD:152975667
NCBI chr11:68,911,883...69,103,230
Ensembl chr11:68,911,883...69,102,689
G
Dlg4
discs large MAGUK scaffold protein 4
IEP
RGD
PMID:14597197
RGD:152975667
NCBI chr10:54,740,700...54,769,097
Ensembl chr10:54,739,470...54,767,153
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Dmd
dystrophin
IEP
RGD
PMID:1454857
RGD:12880362
NCBI chr X:47,272,324...49,504,219
Ensembl chr X:47,272,331...49,504,207
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Emx1
empty spiracles homeobox 1
acts_upstream_of_or_within
ISO
MGI:1314653|MGI:1928281|MGI:88355|MGI:95388 (PMID:12764040), (PMID:16892058), (PMID:25100583)
RGD
PMID:12764040 PMID:16892058 PMID:25100583
NCBI chr 4:117,725,148...117,741,616
Ensembl chr 4:117,725,155...117,741,613
G
Emx2
empty spiracles homeobox 2
acts_upstream_of_or_within
ISO
MGI:95387 (PMID:12764040)
RGD
PMID:12764040
NCBI chr 1:258,626,584...258,633,594
Ensembl chr 1:258,626,584...258,633,594
G
Enpp1
ectonucleotide pyrophosphatase/phosphodiesterase 1
IEP
RGD
PMID:18565716
RGD:13204724
NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715
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Eomes
eomesodermin
involved_in
ISO
(PMID:30186101)
RGD
PMID:30186101
NCBI chr 8:118,181,340...118,189,186
Ensembl chr 8:118,181,777...118,188,316
G
Fat4
FAT atypical cadherin 4
involved_in
ISO
(PMID:19506035)
RGD
PMID:19506035
NCBI chr 2:121,927,266...122,056,700
Ensembl chr 2:121,927,942...122,056,707
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Filip1
filamin A interacting protein 1
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:26655467) GO_REF:0000107
RGD Ensembl
PMID:26655467
GO_REF:0000107
NCBI chr 8:80,761,283...80,956,556
Ensembl chr 8:80,764,604...80,922,549
G
Fktn
fukutin
acts_upstream_of_or_within
ISO
(PMID:29360985)
RGD
PMID:29360985
NCBI chr 5:68,339,803...68,396,412
Ensembl chr 5:68,340,028...68,396,409
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Flna
filamin A
IEP
RGD
PMID:22076441
RGD:11564351
NCBI chr X:152,007,758...152,034,266
Ensembl chr X:152,007,758...152,031,052
G
Fos
Fos proto-oncogene, AP-1 transcription factor subunit
IMP
RGD
PMID:32385110
RGD:405649740
NCBI chr 6:105,121,170...105,124,036
Ensembl chr 6:105,121,170...105,124,036
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Foxg1
forkhead box G1
acts_upstream_of_or_within
ISO
(PMID:22726835)
RGD
PMID:22726835
NCBI chr 6:66,674,797...66,677,611
Ensembl chr 6:66,666,587...66,678,607
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Foxp2
forkhead box P2
involved_in
ISO IEA
(PMID:18987363) GO_REF:0000107
RGD Ensembl
PMID:18987363
GO_REF:0000107
NCBI chr 4:43,133,827...43,712,442
Ensembl chr 4:43,133,912...43,711,683
G
Gart
phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase
IEP
RGD
PMID:7057182
RGD:2301991
NCBI chr11:30,864,896...30,891,125
Ensembl chr11:30,865,889...30,891,125
G
Gng12
G protein subunit gamma 12
IEP
RGD
PMID:9003074
RGD:2314446
NCBI chr 4:96,011,118...96,134,767
Ensembl chr 4:96,010,952...96,134,712
G
Gria1
glutamate ionotropic receptor AMPA type subunit 1
IEP
RGD
PMID:14597197
RGD:152975667
NCBI chr10:41,210,713...41,527,283
Ensembl chr10:41,210,713...41,527,283
G
Gria2
glutamate ionotropic receptor AMPA type subunit 2
IEP
RGD
PMID:14597197
RGD:152975667
NCBI chr 2:165,949,379...166,069,510
Ensembl chr 2:165,947,521...166,069,510
G
Grin1
glutamate ionotropic receptor NMDA type subunit 1
acts_upstream_of_or_within
ISO
MGI:1928279|MGI:1928281|MGI:2655232|MGI:2655237 (PMID:10963597), (PMID:12657691)
RGD
PMID:10963597 PMID:12657691
NCBI chr 3:8,103,680...8,130,603
Ensembl chr 3:8,103,680...8,130,603
G
Grin2a
glutamate ionotropic receptor NMDA type subunit 2A
IEP
RGD
PMID:19409459
RGD:2325985
NCBI chr10:5,629,683...6,053,262
Ensembl chr10:5,631,369...6,044,637
G
Grin2b
glutamate ionotropic receptor NMDA type subunit 2B
IEP
RGD
PMID:19409459
RGD:2325985
NCBI chr 4:168,580,824...169,044,110
Ensembl chr 4:168,599,546...169,042,279
G
Grip1
glutamate receptor interacting protein 1
IEP
RGD
PMID:14597197
RGD:152975667
NCBI chr 7:54,934,856...55,592,274
Ensembl chr 7:54,934,250...55,592,273
G
H2ax
H2A.X variant histone
IEP
RGD
PMID:3622934
RGD:8693731
NCBI chr 8:44,671,907...44,673,262
Ensembl chr 8:44,671,786...44,673,239 Ensembl chr 4:44,671,786...44,673,239
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Hif1a
hypoxia inducible factor 1 subunit alpha
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2677899 (PMID:12972594)
Ensembl RGD
PMID:12972594
GO_REF:0000107
NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
G
Hnrnpk
heterogeneous nuclear ribonucleoprotein K
IEP IDA
RGD
PMID:22102872 PMID:18054780
RGD:10002783 , RGD:10041004
NCBI chr17:6,262,936...6,275,001
Ensembl chr17:6,262,998...6,274,997
G
Kcna1
potassium voltage-gated channel subfamily A member 1
IEP
RGD
PMID:22473424
RGD:10411906
NCBI chr 4:159,464,223...159,472,905
Ensembl chr 4:159,464,188...159,472,682
G
Kcna2
potassium voltage-gated channel subfamily A member 2
IEP
RGD
PMID:22473424
RGD:10411906
NCBI chr 2:194,704,555...194,718,387
Ensembl chr 2:194,704,639...194,718,400
G
Kcnc4
potassium voltage-gated channel subfamily C member 4
IEP
RGD
PMID:22473424
RGD:10411906
NCBI chr 2:195,063,967...195,100,244
Ensembl chr 2:195,071,769...195,099,233
G
Kdm1a
lysine demethylase 1A
IEP
RGD
PMID:20164337
RGD:9588288
NCBI chr 5:148,782,976...148,838,319
Ensembl chr 5:148,782,976...148,838,319
G
Kif14
kinesin family member 14
involved_in
ISO
(PMID:23308235)
RGD
PMID:23308235
NCBI chr13:47,926,975...47,990,598
Ensembl chr13:47,927,044...47,989,164
G
Kif26a
kinesin family member 26A
involved_in
ISO
(PMID:36228617)
RGD
PMID:36228617
NCBI chr 6:131,214,839...131,250,874
Ensembl chr 6:131,214,861...131,250,320
G
Kif5a
kinesin family member 5A
IEP
RGD
PMID:9349526
RGD:12792964
NCBI chr 7:63,051,894...63,089,024
Ensembl chr 7:63,049,424...63,092,858
G
Lhx2
LIM homeobox 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:26371318), (PMID:28053041) MGI:4399044 (PMID:19820705)
Ensembl RGD
PMID:19820705 PMID:26371318 PMID:28053041
GO_REF:0000107
NCBI chr 3:22,113,619...22,143,909
Ensembl chr 3:22,126,007...22,143,908
G
Lrp1
LDL receptor related protein 1
IEP
RGD
PMID:8930375
RGD:10046019
NCBI chr 7:63,380,325...63,461,029
Ensembl chr 7:63,380,356...63,460,910
G
Lrp6
LDL receptor related protein 6
acts_upstream_of_or_within
ISO
MGI:2156191 (PMID:16920270)
RGD
PMID:16920270
NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497
G
Lrp8
LDL receptor related protein 8
IEP
RGD
PMID:20368265
RGD:2324624
NCBI chr 5:122,563,468...122,635,434
Ensembl chr 5:122,563,453...122,631,352
G
Mcph1
microcephalin 1
acts_upstream_of_or_within
ISO
MGI:5308745 (PMID:21947081)
RGD
PMID:21947081
NCBI chr16:71,021,855...71,224,067
Ensembl chr16:71,024,588...71,224,122
G
Mdk
midkine
involved_in
IEA ISO
GO_REF:0000107 (PMID:10096022)
Ensembl RGD
PMID:10096022
GO_REF:0000107
NCBI chr 3:77,901,134...77,903,997
Ensembl chr 3:77,901,158...77,903,130
G
Mecp2
methyl CpG binding protein 2
IEP
RGD
PMID:14751287
RGD:12743658
NCBI chr X:151,781,177...151,844,687
Ensembl chr X:151,789,930...151,844,689
G
Mgarp
mitochondria-localized glutamic acid-rich protein
involved_in
ISO
(PMID:24323429)
RGD
PMID:24323429
NCBI chr 2:135,431,283...135,439,425
Ensembl chr 2:135,431,283...135,439,612
G
Mkks
MKKS centrosomal shuttling protein
acts_upstream_of_or_within
ISO
MGI:3526444 (PMID:18032602)
RGD
PMID:18032602
NCBI chr 3:124,201,877...124,221,142
Ensembl chr 3:124,201,877...124,220,162
G
Nars1
asparaginyl-tRNA synthetase 1
involved_in
ISO
(PMID:32788587)
RGD
PMID:32788587
NCBI chr18:57,989,308...58,005,584
Ensembl chr18:57,989,308...58,005,622
G
Ncoa1
nuclear receptor coactivator 1
IEP
RGD
PMID:12551846
RGD:5688241
NCBI chr 6:27,232,609...27,507,992
Ensembl chr 6:27,232,611...27,475,664
G
Nde1
nudE neurodevelopment protein 1
involved_in acts_upstream_of_or_within
ISO IEA ISS
(PMID:21529752) MGI:109520 (PMID:18469343) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:18469343 PMID:21529752
GO_REF:0000024 GO_REF:0000107
NCBI chr10:839,788...883,946
Ensembl chr10:839,788...883,869
G
Nefh
neurofilament heavy chain
IEP
RGD
PMID:10439464
RGD:9743942
NCBI chr14:79,830,362...79,840,347
Ensembl chr14:79,830,362...79,840,351
G
Nefl
neurofilament light chain
IEP
RGD
PMID:10439464
RGD:9743942
NCBI chr15:42,301,920...42,305,793
Ensembl chr15:42,301,916...42,305,793
G
Nefm
neurofilament medium chain
IEP
RGD
PMID:10439464
RGD:9743942
NCBI chr15:42,360,449...42,365,753
Ensembl chr15:42,360,454...42,365,755
G
Nf1
neurofibromin 1
involved_in acts_upstream_of_or_within
IEA ISO ISS
GO_REF:0000107 MGI:2176055|MGI:2176057 (PMID:11297510) GO_REF:0000024
Ensembl RGD HGNC-UCL
PMID:11297510
GO_REF:0000024 GO_REF:0000107
NCBI chr10:64,306,027...64,539,112
Ensembl chr10:64,306,301...64,536,658
G
Nfix
nuclear factor I X
involved_in
ISO
MGI:3802571 (PMID:18477394)
RGD
PMID:18477394
NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265
G
Npy
neuropeptide Y
involved_in
ISO IEA
(PMID:9067840) GO_REF:0000107
RGD Ensembl
PMID:9067840
GO_REF:0000107
NCBI chr 4:78,881,294...78,888,495
Ensembl chr 4:78,881,264...78,888,495
G
Nr2e1
nuclear receptor subfamily 2, group E, member 1
acts_upstream_of_or_within
ISO
MGI:2151350|MGI:2176490 (PMID:11997145), (PMID:12527005), (PMID:15950290), (PMID:16000615)
RGD
PMID:11997145 PMID:12527005 PMID:15950290 PMID:16000615
NCBI chr20:46,050,134...46,071,257
Ensembl chr20:46,050,414...46,073,949
G
Nr4a2
nuclear receptor subfamily 4, group A, member 2
IEP
RGD
PMID:21056632
RGD:124713572
NCBI chr 3:41,689,847...41,707,036
Ensembl chr 3:41,689,851...41,697,877
G
Nsun5
NOP2/Sun RNA methyltransferase 5
involved_in
ISO
(PMID:31462248)
RGD
PMID:31462248
NCBI chr12:21,293,637...21,299,319
Ensembl chr12:21,293,645...21,299,272
G
Ntrk2
neurotrophic receptor tyrosine kinase 2
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:15372074) GO_REF:0000024
Ensembl RGD UniProt
PMID:15372074
GO_REF:0000024 GO_REF:0000107
NCBI chr17:5,558,992...5,870,299
Ensembl chr17:5,559,043...5,869,136
G
Pafah1b1
platelet-activating factor acetylhydrolase 1b, regulatory subunit 1
involved_in acts_upstream_of_or_within
ISO
(PMID:9063735) MGI:1914453|MGI:2387783 (PMID:11344260), (PMID:18469343)
RGD
PMID:9063735 PMID:11344260 PMID:18469343
NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808
G
Pals1
protein associated with LIN7 1, MAGUK p55 family member
involved_in
ISS ISO
GO_REF:0000024 (PMID:20399730)
UniProt RGD
PMID:20399730
GO_REF:0000024
NCBI chr 6:97,548,133...97,654,163
Ensembl chr 6:97,548,630...97,653,305
G
Pax5
paired box 5
acts_upstream_of_or_within
ISO
MGI:2386577 (PMID:23349049)
RGD
PMID:23349049
NCBI chr 5:58,763,334...58,945,719
Ensembl chr 5:58,765,036...58,944,326
G
Pax6
paired box 6
involved_in
ISO
(PMID:30186101)
RGD
PMID:30186101
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
G
Phactr1
phosphatase and actin regulator 1
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:30256902) GO_REF:0000107
UniProt RGD Ensembl
PMID:30256902
GO_REF:0000024 GO_REF:0000107
NCBI chr17:21,560,364...22,040,166
Ensembl chr17:21,562,721...22,039,831
G
Plcb1
phospholipase C beta 1
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:11224545) GO_REF:0000107
BHF-UCL RGD Ensembl
PMID:11224545
GO_REF:0000024 GO_REF:0000107
NCBI chr 3:122,059,988...122,772,896
Ensembl chr 3:122,060,031...122,772,869
G
Ppp1r9b
protein phosphatase 1, regulatory subunit 9B
IEP
RGD
PMID:9275233
RGD:625590
NCBI chr10:79,938,055...79,954,085
Ensembl chr10:79,938,066...79,954,083
G
Psen1
presenilin 1
acts_upstream_of_or_within
ISO
MGI:1857974 (PMID:16079160)
RGD
PMID:16079160
NCBI chr 6:103,323,052...103,375,088
Ensembl chr 6:103,323,120...103,371,650
G
Ptprs
protein tyrosine phosphatase, receptor type, S
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2158734 (PMID:15842738)
Ensembl RGD
PMID:15842738
GO_REF:0000107
NCBI chr 9:1,245,408...1,307,015
Ensembl chr 9:1,245,410...1,306,947
G
Reln
reelin
acts_upstream_of_or_within
IEP ISO
MGI:1856398 (PMID:21491433)
RGD
PMID:21491433 PMID:10436054
RGD:634730
NCBI chr 4:12,736,177...13,162,956
Ensembl chr 4:12,736,130...13,162,211
G
Scn2a
sodium voltage-gated channel alpha subunit 2
IEP
RGD
PMID:22473424
RGD:10411906
NCBI chr 3:70,710,862...70,845,569
Ensembl chr 3:50,302,877...50,437,214
G
Slc2a1
solute carrier family 2 member 1
IEP
RGD
PMID:16581179
RGD:12879481
NCBI chr 5:132,717,196...132,745,416
Ensembl chr 5:132,717,196...132,745,416
G
Slc2a3
solute carrier family 2 member 3
IEP
RGD
PMID:16581179
RGD:12879481
NCBI chr 4:155,960,944...156,026,000
Ensembl chr 4:155,960,946...156,025,472
G
Slc38a2
solute carrier family 38, member 2
IEP
RGD
PMID:21718781
RGD:9999217
NCBI chr 7:127,851,267...127,863,482
Ensembl chr 7:127,851,267...127,863,436
G
Smo
smoothened, frizzled class receptor
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2176256 (PMID:23680462)
Ensembl RGD
PMID:23680462
GO_REF:0000107
NCBI chr 4:58,343,626...58,373,823
Ensembl chr 4:58,343,529...58,373,829
G
Sox2
SRY-box transcription factor 2
acts_upstream_of_or_within
ISO
MGI:2181440|MGI:3052123 (PMID:15240551)
RGD
PMID:15240551
NCBI chr 2:117,536,929...117,539,340
Ensembl chr 2:117,536,929...117,539,338
G
Srd5a1
steroid 5 alpha-reductase 1
IEP
RGD
PMID:8770891
RGD:4892048
NCBI chr 1:33,686,069...33,720,468
Ensembl chr 1:33,686,391...33,720,461
G
Tacc1
transforming, acidic coiled-coil containing protein 1
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:17920017)
GO_Central RGD
PMID:17920017
GO_REF:0000033
NCBI chr16:66,812,232...66,895,736
Ensembl chr16:66,812,295...66,895,733
G
Tacc2
transforming, acidic coiled-coil containing protein 2
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:17920017)
GO_Central RGD
PMID:17920017
GO_REF:0000033
NCBI chr 1:185,139,223...185,327,881
Ensembl chr 1:185,116,111...185,327,881
G
Tacc3
transforming, acidic coiled-coil containing protein 3
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:17920017)
GO_Central RGD
PMID:17920017
GO_REF:0000033
NCBI chr14:77,051,209...77,065,343
Ensembl chr14:77,051,215...77,065,219
G
Tbr1
T-box brain transcription factor 1
involved_in
IEP ISO
(PMID:30186101)
RGD
PMID:30186101 PMID:10749215
RGD:11576295
NCBI chr 3:46,350,237...46,368,397
Ensembl chr 3:46,351,213...46,361,041
G
Tfap2c
transcription factor AP-2 gamma
acts_upstream_of_or_within
ISO
MGI:2176695 (PMID:19749747)
RGD
PMID:19749747
NCBI chr 3:161,315,114...161,322,998
Ensembl chr 3:161,315,031...161,322,995
G
Th
tyrosine hydroxylase
IEP
RGD
PMID:21295554
RGD:5128671
NCBI chr 1:198,071,500...198,078,832
Ensembl chr 1:198,071,503...198,109,767
G
Trappc9
trafficking protein particle complex subunit 9
involved_in
ISO
(PMID:20004763)
RGD
PMID:20004763
NCBI chr 7:104,521,593...104,998,352
Ensembl chr 7:104,521,593...104,998,352
G
Tsc1
TSC complex subunit 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2176055|MGI:2656240 (PMID:17522300)
Ensembl RGD
PMID:17522300
GO_REF:0000107
NCBI chr 3:11,969,547...12,018,591
Ensembl chr 3:11,979,729...12,015,674
G
Tuba1a
tubulin, alpha 1A
involved_in
ISO
MGI:5308811|MGI:6506267 (PMID:22101068), (PMID:31386652)
RGD
PMID:22101068 PMID:31386652
NCBI chr 7:130,113,214...130,116,880
Ensembl chr 7:130,081,032...130,196,186
G
Tubb2a
tubulin, beta 2A class IIa
involved_in
IEA ISO
GO_REF:0000107 MGI:6506264 (PMID:31386652)
Ensembl RGD
PMID:31386652
GO_REF:0000107
NCBI chr17:30,796,842...30,800,713
Ensembl chr17:30,747,503...30,800,714
G
Tubb2b
tubulin, beta 2B class IIb
involved_in
IEA ISO
GO_REF:0000107 MGI:6506266 (PMID:31386652)
Ensembl RGD
PMID:31386652
GO_REF:0000107
NCBI chr17:30,747,734...30,750,781
Ensembl chr17:30,747,734...30,750,638
G
Ulk4
unc-51 like kinase 4
acts_upstream_of_or_within
ISO
(PMID:34235142)
RGD
PMID:34235142
NCBI chr 8:120,670,879...120,966,026
Ensembl chr 8:120,670,866...120,966,924
G
Vldlr
very low density lipoprotein receptor
IEP
RGD
PMID:20368265
RGD:2324624
NCBI chr 1:224,813,539...224,850,400
Ensembl chr 1:224,814,377...224,845,920
G
Wdr47
WD repeat domain 47
acts_upstream_of_or_within
ISO
MGI:4433065|MGI:6102912 (PMID:29078390)
RGD
PMID:29078390
NCBI chr 2:196,226,757...196,287,739
Ensembl chr 2:196,205,238...196,287,739
G
Wdr62
WD repeat domain 62
involved_in
ISO
(PMID:20729831)
RGD
PMID:20729831
NCBI chr 1:85,491,531...85,530,643
Ensembl chr 1:85,491,533...85,530,637
G
Xab2
XPA binding protein 2
IEP
RGD
PMID:12801913
RGD:634609
NCBI chr12:1,667,672...1,679,702
Ensembl chr12:1,667,672...1,679,692
G
Ywhae
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2667341 (PMID:12796778)
Ensembl RGD
PMID:12796778
GO_REF:0000107
NCBI chr10:60,584,665...60,622,352
Ensembl chr10:60,584,652...60,671,589
G
Zbtb18
zinc finger and BTB domain containing 18
acts_upstream_of_or_within
ISO
MGI:3851929 (PMID:19409883)
RGD
PMID:19409883
NCBI chr13:89,439,501...89,447,958
Ensembl chr13:89,439,420...89,448,862
G
Arx
aristaless related homeobox
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2679972 (PMID:17460091)
Ensembl RGD
PMID:17460091
GO_REF:0000107
NCBI chr X:58,016,233...58,028,149
Ensembl chr X:58,016,233...58,028,142
G
Cntn2
contactin 2
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:11714688) GO_REF:0000107
RGD Ensembl
PMID:11714688
GO_REF:0000107
NCBI chr13:43,942,868...43,975,973
Ensembl chr13:43,947,265...43,975,887
G
Drd1
dopamine receptor D1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857875 (PMID:17409246)
Ensembl RGD
PMID:17409246
GO_REF:0000107
NCBI chr17:10,540,440...10,544,971
Ensembl chr17:10,540,558...10,545,002
G
Drd2
dopamine receptor D2
acts_upstream_of_or_within
ISO
MGI:1857875 (PMID:17409246)
RGD
PMID:17409246
NCBI chr 8:58,605,403...58,669,339
Ensembl chr 8:49,708,927...49,772,875
G
Fezf2
Fez family zinc finger 2
acts_upstream_of_or_within
ISO
MGI:3046867 (PMID:21338885)
RGD
PMID:21338885
NCBI chr15:12,768,614...12,777,554
Ensembl chr15:12,773,762...12,777,554
G
Lhx6
LIM homeobox 6
acts_upstream_of_or_within
ISO
MGI:3702518 (PMID:17376969)
RGD
PMID:17376969
NCBI chr 3:19,432,439...19,456,268
Ensembl chr 3:19,433,494...19,456,061
G
Adgrg1
adhesion G protein-coupled receptor G1
involved_in
ISS ISO
GO_REF:0000024 (PMID:18509043)
UniProt RGD
PMID:18509043
GO_REF:0000024
NCBI chr19:10,003,963...10,041,122
Ensembl chr19:10,003,975...10,041,108
G
Gli3
GLI family zinc finger 3
acts_upstream_of_or_within
ISO
MGI:1856282 (PMID:9232833)
RGD
PMID:9232833
NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
G
P2ry12
purinergic receptor P2Y12
involved_in
IMP
PMID:18183622 PMID:17299767
ARUK-UCL
PMID:18183622 PMID:17299767
RGD:13673786 , RGD:13673751
NCBI chr 2:143,481,468...143,523,340
Ensembl chr 2:143,481,430...143,523,361
G
Rtn4
reticulon 4
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:20093372) GO_REF:0000107
UniProt RGD Ensembl
PMID:20093372
GO_REF:0000024 GO_REF:0000107
NCBI chr14:103,450,074...103,497,687
Ensembl chr14:103,449,930...103,497,686
G
Wdr47
WD repeat domain 47
acts_upstream_of_or_within
ISO
MGI:6102912 (PMID:29078390)
RGD
PMID:29078390
NCBI chr 2:196,226,757...196,287,739
Ensembl chr 2:196,205,238...196,287,739
G
Ccdc141
coiled-coil domain containing 141
acts_upstream_of_or_within
ISO
(PMID:20956536)
RGD
PMID:20956536
NCBI chr 3:61,948,614...62,109,968
Ensembl chr 3:61,948,646...62,110,079
G
Cdk5r1
cyclin-dependent kinase 5 regulatory subunit 1
involved_in
ISO
(PMID:20624590)
RGD
PMID:20624590
NCBI chr10:65,484,266...65,485,467
Ensembl chr10:65,483,941...65,488,456
G
Cul5
cullin 5
acts_upstream_of_or_within
ISO
(PMID:24210661)
RGD
PMID:24210661
NCBI chr 8:54,012,963...54,066,751
Ensembl chr 8:54,016,006...54,066,666
G
Dab1
DAB adaptor protein 1
involved_in acts_upstream_of_or_within
IMP ISO
(PMID:9338784) MGI:1337096|MGI:1861918 (PMID:24210661), (PMID:9338785)
RGD
PMID:9338784 PMID:9338785 PMID:24210661 PMID:18160654
RGD:2324689
NCBI chr 5:118,392,953...119,513,625
Ensembl chr 5:119,140,533...119,510,552
G
Disc1
DISC1 scaffold protein
involved_in
ISO
(PMID:20624590)
RGD
PMID:20624590
NCBI chr19:53,014,201...53,223,617
Ensembl chr19:53,014,616...53,219,778
G
Dixdc1
DIX domain containing 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:20624590)
Ensembl RGD
PMID:20624590
GO_REF:0000107
NCBI chr 8:51,007,835...51,081,191
Ensembl chr 8:51,007,838...51,081,090
G
Fbxo45
F-box protein 45
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3849742 (PMID:19398581)
Ensembl RGD
PMID:19398581
GO_REF:0000107
NCBI chr11:68,551,430...68,567,053
Ensembl chr11:68,551,122...68,566,800
G
Fut10
fucosyltransferase 10
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:23986452)
Ensembl RGD
PMID:23986452
GO_REF:0000107
NCBI chr16:60,868,761...60,958,762
Ensembl chr16:60,877,952...60,958,683
G
Lhx6
LIM homeobox 6
acts_upstream_of_or_within
ISO
MGI:3702518 (PMID:17376969)
RGD
PMID:17376969
NCBI chr 3:19,432,439...19,456,268
Ensembl chr 3:19,433,494...19,456,061
G
Mdga1
MAM domain containing glycosylphosphatidylinositol anchor 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:4878863 (PMID:21104742)
Ensembl RGD
PMID:21104742
GO_REF:0000107
NCBI chr20:7,900,327...7,964,309
Ensembl chr20:7,904,358...7,963,471
G
Ndel1
nudE neurodevelopment protein 1-like 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:20624590)
Ensembl RGD
PMID:20624590
GO_REF:0000107
NCBI chr10:53,505,628...53,582,025
Ensembl chr10:53,516,491...53,570,907
G
Pou3f2
POU class 3 homeobox 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:102564 (PMID:12130536)
Ensembl RGD
PMID:12130536
GO_REF:0000107
NCBI chr 5:36,077,930...36,083,838
Ensembl chr 5:36,077,930...36,083,838
G
Pou3f3
POU class 3 homeobox 3
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:101895 (PMID:12130536)
Ensembl RGD
PMID:12130536
GO_REF:0000107
NCBI chr 9:44,945,872...44,948,998
Ensembl chr 9:44,945,872...44,948,992
G
Rac1
Rac family small GTPase 1
acts_upstream_of_or_within
ISO
MGI:1932522|MGI:2663662 (PMID:17409253)
RGD
PMID:17409253
NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251
G
Rnf7
ring finger protein 7
acts_upstream_of_or_within
ISO
MGI:108554 (PMID:24210661)
RGD
PMID:24210661
NCBI chr 8:97,038,845...97,048,080
Ensembl chr 8:97,038,840...97,047,824
G
Socs7
suppressor of cytokine signaling 7
acts_upstream_of_or_within
ISO
(PMID:24210661)
RGD
PMID:24210661
NCBI chr10:82,352,159...82,388,829
Ensembl chr10:82,351,680...82,388,830
G
Adgrg1
adhesion G protein-coupled receptor G1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:24531968)
Ensembl RGD
PMID:24531968
GO_REF:0000107
NCBI chr19:10,003,963...10,041,122
Ensembl chr19:10,003,975...10,041,108
G
Bhlhe22
basic helix-loop-helix family, member e22
acts_upstream_of_or_within
ISO
MGI:3707409 (PMID:23431145)
RGD
PMID:23431145
NCBI chr 2:100,486,400...100,489,510
Ensembl chr 2:100,486,400...100,489,510
G
Dmrta2
DMRT-like family A2
acts_upstream_of_or_within
ISO
MGI:5527461 (PMID:22923088), (PMID:23056351)
RGD
PMID:22923088 PMID:23056351
NCBI chr 5:124,805,883...124,811,694
Ensembl chr 5:124,805,883...124,811,630
G
Emx1
empty spiracles homeobox 1
acts_upstream_of_or_within
ISO
MGI:95388 (PMID:15147765)
RGD
PMID:15147765
NCBI chr 4:117,725,148...117,741,616
Ensembl chr 4:117,725,155...117,741,613
G
Emx2
empty spiracles homeobox 2
acts_upstream_of_or_within
ISO
MGI:2148858|MGI:95387 (PMID:12764040), (PMID:15147765)
RGD
PMID:12764040 PMID:15147765
NCBI chr 1:258,626,584...258,633,594
Ensembl chr 1:258,626,584...258,633,594
G
Eomes
eomesodermin
involved_in acts_upstream_of_or_within
ISO
(PMID:30186101) MGI:2176173|MGI:3802572 (PMID:23431145)
RGD
PMID:23431145 PMID:30186101
NCBI chr 8:118,181,340...118,189,186
Ensembl chr 8:118,181,777...118,188,316
G
Nr2f1
nuclear receptor subfamily 2, group F, member 1
acts_upstream_of_or_within
ISO
MGI:3521756 (PMID:17828260)
RGD
PMID:17828260
NCBI chr 2:8,040,375...8,050,123
Ensembl chr 2:8,040,377...8,050,123
G
Pax6
paired box 6
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:30186101) MGI:1856155 (PMID:12764040), (PMID:23431145)
Ensembl RGD
PMID:12764040 PMID:23431145 PMID:30186101
GO_REF:0000107
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
G
Tra2b
transformer 2 beta
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2176173|MGI:4450919 (PMID:24586484)
Ensembl RGD
PMID:24586484
GO_REF:0000107
NCBI chr11:78,788,880...78,807,252
Ensembl chr11:78,788,884...78,807,249
G
Arx
aristaless related homeobox
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2679972 (PMID:17460091)
Ensembl RGD
PMID:17460091
GO_REF:0000107
NCBI chr X:58,016,233...58,028,149
Ensembl chr X:58,016,233...58,028,142
G
Fbxo45
F-box protein 45
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3849742 (PMID:19398581)
Ensembl RGD
PMID:19398581
GO_REF:0000107
NCBI chr11:68,551,430...68,567,053
Ensembl chr11:68,551,122...68,566,800
G
Lhx6
LIM homeobox 6
acts_upstream_of_or_within
ISO
MGI:3702518 (PMID:17376969)
RGD
PMID:17376969
NCBI chr 3:19,432,439...19,456,268
Ensembl chr 3:19,433,494...19,456,061
G
Reln
reelin
involved_in acts_upstream_of_or_within
ISS ISO IEA
GO_REF:0000024 MGI:1856398 (PMID:16901480) GO_REF:0000107
UniProt RGD Ensembl
PMID:16901480
GO_REF:0000024 GO_REF:0000107
NCBI chr 4:12,736,177...13,162,956
Ensembl chr 4:12,736,130...13,162,211
G
Slit1
slit guidance ligand 1
NOT|involved_in
ISO
(PMID:11748139)
RGD
PMID:11748139
NCBI chr 1:240,409,559...240,558,127
Ensembl chr 1:240,409,561...240,558,127
G
Slit2
slit guidance ligand 2
NOT|involved_in
ISO
(PMID:11748139)
RGD
PMID:11748139
NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
G
Slit3
slit guidance ligand 3
NOT|involved_in
ISO
(PMID:11748139)
RGD
PMID:11748139
NCBI chr10:19,571,798...20,156,634
Ensembl chr10:19,571,684...20,156,634
G
Nrg1
neuregulin 1
acts_upstream_of_or_within
ISO
(PMID:22376909)
RGD
PMID:22376909
NCBI chr16:59,250,658...60,304,519
Ensembl chr16:59,250,854...60,296,884
G
Nrg3
neuregulin 3
acts_upstream_of_or_within
ISO
(PMID:22376909)
RGD
PMID:22376909
NCBI chr16:14,229,270...15,352,505
Ensembl chr16:14,235,157...15,352,368
G
Robo1
roundabout guidance receptor 1
involved_in
ISO
(PMID:15207848)
RGD
PMID:15207848
NCBI chr11:10,580,863...11,621,675
Ensembl chr11:10,580,908...11,620,203
G
Slit2
slit guidance ligand 2
involved_in
ISO IEA
(PMID:15207848) GO_REF:0000107
RGD Ensembl
PMID:15207848
GO_REF:0000107
NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
G
Atg16l1
autophagy related 16-like 1
acts_upstream_of_or_within
ISO
MGI:4432181 (PMID:29078390)
RGD
PMID:29078390
NCBI chr 9:88,420,737...88,457,530
Ensembl chr 9:88,422,038...88,457,529
G
Cacna1c
calcium voltage-gated channel subunit alpha1 C
IEP
RGD
PMID:22473424
RGD:10411906
NCBI chr 4:151,764,138...152,379,454
Ensembl chr 4:151,764,138...152,379,648
G
Cdk5
cyclin-dependent kinase 5
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1928281|MGI:3043819 (PMID:18032654)
Ensembl RGD
PMID:18032654
GO_REF:0000107
NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
G
Coro1c
coronin 1C
acts_upstream_of_or_within
ISO
MGI:4419168 (PMID:29078390)
RGD
PMID:29078390
NCBI chr12:42,713,024...42,785,179
Ensembl chr12:42,712,991...42,785,179
G
Dcc
DCC netrin 1 receptor
IEP
RGD
PMID:22473424
RGD:10411906
NCBI chr18:64,868,987...65,972,783
Ensembl chr18:64,873,898...65,972,740
G
Dmxl2
Dmx-like 2
acts_upstream_of_or_within
ISO
MGI:4432280 (PMID:29078390)
RGD
PMID:29078390
NCBI chr 8:54,741,164...54,884,948
Ensembl chr 8:54,741,160...54,885,161
G
Ephb2
Eph receptor B2
involved_in
ISO
(PMID:8947026)
RGD
PMID:8947026
NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059
G
Ephb3
Eph receptor B3
involved_in
ISO
(PMID:8947026)
RGD
PMID:8947026
NCBI chr11:79,840,668...79,859,345
Ensembl chr11:79,840,668...79,859,370
G
Filip1
filamin A interacting protein 1
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:26655467) GO_REF:0000107
RGD Ensembl
PMID:26655467
GO_REF:0000107
NCBI chr 8:80,761,283...80,956,556
Ensembl chr 8:80,764,604...80,922,549
G
Herc1
HECT and RLD domain containing E3 ubiquitin protein ligase family member 1
acts_upstream_of_or_within
ISO
MGI:6102914 (PMID:29078390)
RGD
PMID:29078390
NCBI chr 8:66,857,169...67,070,318
Ensembl chr 8:66,856,935...67,070,312
G
Kcna1
potassium voltage-gated channel subfamily A member 1
IEP
RGD
PMID:22473424
RGD:10411906
NCBI chr 4:159,464,223...159,472,905
Ensembl chr 4:159,464,188...159,472,682
G
Kcna2
potassium voltage-gated channel subfamily A member 2
IEP
RGD
PMID:22473424
RGD:10411906
NCBI chr 2:194,704,555...194,718,387
Ensembl chr 2:194,704,639...194,718,400
G
Kcna3
potassium voltage-gated channel subfamily A member 3
IEP
RGD
PMID:22473424
RGD:10411906
NCBI chr 2:194,632,106...194,634,059
Ensembl chr 2:194,632,196...194,650,138
G
Kcnc1
potassium voltage-gated channel subfamily C member 1
IEP
RGD
PMID:22473424
RGD:10411906
NCBI chr 1:96,902,953...96,944,744
Ensembl chr 1:96,902,953...96,944,744
G
Kcnc3
potassium voltage-gated channel subfamily C member 3
IEP
RGD
PMID:22473424
RGD:10411906
NCBI chr 1:95,080,960...95,095,165
Ensembl chr 1:95,080,960...95,095,160
G
Kcnc4
potassium voltage-gated channel subfamily C member 4
IEP
RGD
PMID:22473424
RGD:10411906
NCBI chr 2:195,063,967...195,100,244
Ensembl chr 2:195,071,769...195,099,233
G
Kif21b
kinesin family member 21B
acts_upstream_of_or_within
ISO
MGI:4364527 (PMID:29078390)
RGD
PMID:29078390
NCBI chr13:47,576,129...47,626,112
Ensembl chr13:47,576,160...47,626,127
G
Lpar1
lysophosphatidic acid receptor 1
IEP
RGD
PMID:9753172
RGD:2317716
NCBI chr 5:73,229,047...73,347,874
Ensembl chr 5:73,229,625...73,369,895
G
Nsun5
NOP2/Sun RNA methyltransferase 5
involved_in
ISO
(PMID:31174389)
RGD
PMID:31174389
NCBI chr12:21,293,637...21,299,319
Ensembl chr12:21,293,645...21,299,272
G
Ptprs
protein tyrosine phosphatase, receptor type, S
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2158734 (PMID:15842738)
Ensembl RGD
PMID:15842738
GO_REF:0000107
NCBI chr 9:1,245,408...1,307,015
Ensembl chr 9:1,245,410...1,306,947
G
Rpgrip1l
Rpgrip1-like
acts_upstream_of_or_within
ISO
MGI:3716208 (PMID:17558409)
RGD
PMID:17558409
NCBI chr19:15,692,189...15,785,083
Ensembl chr19:15,692,150...15,785,083
G
Rtn4r
reticulon 4 receptor
involved_in
ISS ISO
GO_REF:0000024 (PMID:27339102)
UniProt RGD
PMID:27339102
GO_REF:0000024
NCBI chr11:82,844,309...82,869,251
Ensembl chr11:82,844,309...82,869,466
G
Rtn4rl1
reticulon 4 receptor-like 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:27339102)
Ensembl RGD
PMID:27339102
GO_REF:0000107
NCBI chr10:60,043,246...60,116,977
Ensembl chr10:60,043,002...60,116,978
G
Rtn4rl2
reticulon 4 receptor-like 2
involved_in
ISO
(PMID:27339102)
RGD
PMID:27339102
NCBI chr 3:69,954,557...69,971,108
Ensembl chr 3:69,955,169...69,971,488
G
Ryk
receptor-like tyrosine kinase
involved_in
ISS ISO
GO_REF:0000024 (PMID:16723543)
UniProt RGD
PMID:16723543
GO_REF:0000024
NCBI chr 8:103,419,338...103,492,083
Ensembl chr 8:103,419,275...103,491,698
G
Scn2a
sodium voltage-gated channel alpha subunit 2
IEP
RGD
PMID:22473424
RGD:10411906
NCBI chr 3:70,710,862...70,845,569
Ensembl chr 3:50,302,877...50,437,214
G
Ulk4
unc-51 like kinase 4
acts_upstream_of_or_within
ISO
MGI:4362969 (PMID:24284070)
RGD
PMID:24284070
NCBI chr 8:120,670,879...120,966,026
Ensembl chr 8:120,670,866...120,966,924
G
Wdr37
WD repeat domain 37
acts_upstream_of_or_within
ISO
MGI:4452651 (PMID:29078390)
RGD
PMID:29078390
NCBI chr17:61,637,258...61,703,677
Ensembl chr17:61,637,258...61,703,677
G
Wdr47
WD repeat domain 47
acts_upstream_of_or_within
ISO
MGI:4433065 (PMID:29078390)
RGD
PMID:29078390
NCBI chr 2:196,226,757...196,287,739
Ensembl chr 2:196,205,238...196,287,739
G
Wdr89
WD repeat domain 89
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:4944354 (PMID:29078390)
Ensembl RGD
PMID:29078390
GO_REF:0000107
NCBI chr 6:94,350,468...94,382,085
Ensembl chr 6:94,350,303...94,382,026
G
Bhlhe22
basic helix-loop-helix family, member e22
acts_upstream_of_or_within
ISO
MGI:2684610|MGI:4440742|MGI:4440744 (PMID:22284184)
RGD
PMID:22284184
NCBI chr 2:100,486,400...100,489,510
Ensembl chr 2:100,486,400...100,489,510
G
Grcc10
gene rich cluster, C10 gene
involved_in
ISO
(PMID:23453665), (PMID:23453666), (PMID:23633300), (PMID:24798461)
RGD
PMID:23453665 PMID:23453666 PMID:23633300 PMID:24798461
NCBI chr 4:157,551,276...157,552,924
G
Nin
ninein
acts_upstream_of_or_within
ISO
MGI:1344407 (PMID:25741725)
RGD
PMID:25741725
NCBI chr 6:88,525,405...88,627,710
Ensembl chr 6:88,525,742...88,627,639
G
Pafah1b1
platelet-activating factor acetylhydrolase 1b, regulatory subunit 1
involved_in
ISO
(PMID:9063735)
RGD
PMID:9063735
NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808
G
Prdm8
PR/SET domain 8
acts_upstream_of_or_within
ISO
MGI:5315763 (PMID:22284184)
RGD
PMID:22284184
NCBI chr14:11,403,202...11,424,059
Ensembl chr14:11,404,407...11,410,993
G
Szt2
SZT2 subunit of KICSTOR complex
involved_in
ISO
(PMID:23932106)
RGD
PMID:23932106
NCBI chr 5:131,897,250...131,943,953
Ensembl chr 5:131,897,275...131,943,904
G
Tsku
tsukushi, small leucine rich proteoglycan
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:4867728 (PMID:21055390)
Ensembl RGD
PMID:21055390
GO_REF:0000107
NCBI chr 1:152,660,259...152,671,682
Ensembl chr 1:152,656,693...152,672,588
G
Zeb2
zinc finger E-box binding homeobox 2
acts_upstream_of_or_within
ISO
MGI:2387499|MGI:2668659 (PMID:25741725)
RGD
PMID:25741725
NCBI chr 3:29,214,581...29,344,890
Ensembl chr 3:29,218,301...29,345,157
G
Atat1
alpha tubulin acetyltransferase 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:4453011 (PMID:23720746)
Ensembl RGD
PMID:23720746
GO_REF:0000107
NCBI chr20:2,844,595...2,857,809
Ensembl chr20:2,844,616...2,861,964
G
Bloc1s6
biogenesis of lysosomal organelles complex 1 subunit 6
acts_upstream_of_or_within
ISO
MGI:1856982 (PMID:30498428)
RGD
PMID:30498428
NCBI chr 3:109,816,397...109,826,528
Ensembl chr 3:109,816,366...109,828,308
G
Btg2
BTG anti-proliferation factor 2
acts_upstream_of_or_within
ISO
MGI:3525505 (PMID:20020054)
RGD
PMID:20020054
NCBI chr13:45,531,881...45,535,642
Ensembl chr13:45,531,925...45,535,628
G
Csf1r
colony stimulating factor 1 receptor
IMP
RGD
PMID:33450391
RGD:126781687
NCBI chr18:54,546,673...54,590,418
Ensembl chr18:54,546,659...54,590,415
G
Drd1
dopamine receptor D1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2181426|MGI:3707260 (PMID:17360497)
Ensembl RGD
PMID:17360497
GO_REF:0000107
NCBI chr17:10,540,440...10,544,971
Ensembl chr17:10,540,558...10,545,002
G
Emx2
empty spiracles homeobox 2
acts_upstream_of_or_within
ISO
MGI:2148858 (PMID:10729342)
RGD
PMID:10729342
NCBI chr 1:258,626,584...258,633,594
Ensembl chr 1:258,626,584...258,633,594
G
Fbxo41
F-box protein 41
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:35372812) GO_REF:0000107
RGD Ensembl
PMID:35372812
GO_REF:0000107
NCBI chr 4:118,007,517...118,039,547
Ensembl chr 4:118,010,978...118,039,406
G
Fezf2
Fez family zinc finger 2
acts_upstream_of_or_within
ISO
MGI:3046867 (PMID:16971467)
RGD
PMID:16971467
NCBI chr15:12,768,614...12,777,554
Ensembl chr15:12,773,762...12,777,554
G
Fxr1
FMR1 autosomal homolog 1
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:28204491) GO_REF:0000107
UniProt RGD Ensembl
PMID:28204491
GO_REF:0000024 GO_REF:0000107
NCBI chr 2:116,884,167...116,937,590
Ensembl chr 2:116,884,248...116,937,590
G
Fxr2
FMR1 autosomal homolog 2
involved_in
ISO
(PMID:21658585)
RGD
PMID:21658585
NCBI chr10:54,350,577...54,370,964
Ensembl chr10:54,350,131...54,370,964
G
Kcnq2
potassium voltage-gated channel subfamily Q member 2
acts_upstream_of_or_within
ISO
MGI:98248 (PMID:16464983)
RGD
PMID:16464983
NCBI chr 3:168,194,776...168,253,831
Ensembl chr 3:168,195,357...168,275,071
G
Kif3a
kinesin family member 3a
acts_upstream_of_or_within
ISO
MGI:2179048|MGI:2386464 (PMID:18297065)
RGD
PMID:18297065
NCBI chr10:37,725,930...37,761,183
Ensembl chr10:37,725,970...37,759,191
G
Large1
LARGE xylosyl- and glucuronyltransferase 1
acts_upstream_of_or_within
ISO
MGI:1856965 (PMID:21970971)
RGD
PMID:21970971
NCBI chr19:11,603,129...12,048,930
Ensembl chr19:11,603,129...12,048,930
G
Lef1
lymphoid enhancer binding factor 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1933764 (PMID:10631168)
Ensembl RGD
PMID:10631168
GO_REF:0000107
NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794
G
Lmx1a
LIM homeobox transcription factor 1 alpha
acts_upstream_of_or_within
ISO
MGI:1888413 (PMID:1638738)
RGD
PMID:1638738
NCBI chr13:79,834,614...79,978,253
Ensembl chr13:79,835,019...79,978,253
G
Mdk
midkine
involved_in
IEA ISO
GO_REF:0000107 (PMID:10096022)
Ensembl RGD
PMID:10096022
GO_REF:0000107
NCBI chr 3:77,901,134...77,903,997
Ensembl chr 3:77,901,158...77,903,130
G
Mef2c
myocyte enhancer factor 2C
IEP
RGD
PMID:18949272
RGD:5131610
NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
G
Neurod1
neuronal differentiation 1
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 (PMID:10398678), (PMID:10639171) MGI:106593 (PMID:10804213)
UniProt RGD
PMID:10398678 PMID:10639171 PMID:10804213
GO_REF:0000024
NCBI chr 3:64,359,554...64,363,526
Ensembl chr 3:64,359,395...64,363,649
G
Neurod6
neuronal differentiation 6
acts_upstream_of_or_within
ISO
MGI:1339708 (PMID:10804213)
RGD
PMID:10804213
NCBI chr 4:84,846,659...84,849,905
Ensembl chr 4:84,846,231...84,849,999
G
Nr2e1
nuclear receptor subfamily 2, group E, member 1
acts_upstream_of_or_within
ISO
MGI:2151350|MGI:2181426 (PMID:12527005), (PMID:17953618)
RGD
PMID:12527005 PMID:17953618
NCBI chr20:46,050,134...46,071,257
Ensembl chr20:46,050,414...46,073,949
G
Pianp
PILR alpha associated neural protein
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:31511635) GO_REF:0000107
RGD Ensembl
PMID:31511635
GO_REF:0000107
NCBI chr 4:157,796,425...157,804,842
Ensembl chr 4:157,798,808...157,804,842
G
Pomgnt1
protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-)
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3623521 (PMID:21970971)
Ensembl RGD
PMID:21970971
GO_REF:0000107
NCBI chr 5:129,634,274...129,644,150
Ensembl chr 5:129,634,294...129,644,149
G
Pomt2
protein-O-mannosyltransferase 2
acts_upstream_of_or_within
ISO
MGI:5302103 (PMID:21970971)
RGD
PMID:21970971
NCBI chr 6:106,755,462...106,794,849
Ensembl chr 6:106,755,462...106,794,849
G
Prox1
prospero homeobox 1
involved_in
ISO
(PMID:20808958)
RGD
PMID:20808958
NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183
G
Pten
phosphatase and tensin homolog
involved_in
ISO
(PMID:17706614)
RGD
PMID:17706614
NCBI chr 1:230,630,443...230,697,070
Ensembl chr 1:230,630,338...230,696,838
G
Reln
reelin
IMP
RGD
PMID:15459104
RGD:2317799
NCBI chr 4:12,736,177...13,162,956
Ensembl chr 4:12,736,130...13,162,211
G
Scn2a
sodium voltage-gated channel alpha subunit 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1309503 (PMID:16464983)
Ensembl RGD
PMID:16464983
GO_REF:0000107
NCBI chr 3:70,710,862...70,845,569
Ensembl chr 3:50,302,877...50,437,214
G
Sct
secretin
acts_upstream_of_or_within
ISO
MGI:3815315 (PMID:21159798)
RGD
PMID:21159798
NCBI chr 1:196,382,857...196,383,668
Ensembl chr 1:196,382,856...196,383,658
G
Smo
smoothened, frizzled class receptor
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2176256|MGI:2179048 (PMID:18297065)
Ensembl RGD
PMID:18297065
GO_REF:0000107
NCBI chr 4:58,343,626...58,373,823
Ensembl chr 4:58,343,529...58,373,829
G
Tmem108
transmembrane protein 108
involved_in
ISO
(PMID:28096412)
RGD
PMID:28096412
NCBI chr 8:104,066,081...104,360,172
Ensembl chr 8:104,066,078...104,360,094
G
Tuba1a
tubulin, alpha 1A
involved_in
ISO
MGI:3617352 (PMID:21041996)
RGD
PMID:21041996
NCBI chr 7:130,113,214...130,116,880
Ensembl chr 7:130,081,032...130,196,186
G
Vps13b
vacuolar protein sorting 13 homolog B
acts_upstream_of_or_within
ISO
(PMID:37573958)
RGD
PMID:37573958
NCBI chr 7:66,557,862...67,128,429
Ensembl chr 7:66,558,471...67,128,429
G
Arx
aristaless related homeobox
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2429693 (PMID:15677725)
Ensembl RGD
PMID:15677725
GO_REF:0000107
NCBI chr X:58,016,233...58,028,149
Ensembl chr X:58,016,233...58,028,142
G
Rac1
Rac family small GTPase 1
acts_upstream_of_or_within
ISO
MGI:1932522|MGI:2663662 (PMID:17409253)
RGD
PMID:17409253
NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251
G
Srgap2
SLIT-ROBO Rho GTPase activating protein 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:19737524)
UniProt RGD
PMID:19737524
GO_REF:0000024
NCBI chr13:42,745,956...42,967,091
Ensembl chr13:42,745,947...42,967,058
G
Acvr1c
activin A receptor type 1C
IEP
RGD
PMID:8940033
RGD:631880
NCBI chr 3:42,815,490...42,892,423
Ensembl chr 3:42,822,610...42,892,327
G
Akap5
A-kinase anchoring protein 5
IEP
RGD
PMID:19535604
RGD:2313144
NCBI chr 6:95,051,527...95,061,075
Ensembl chr 6:95,051,537...95,061,578
G
Akr1c14
aldo-keto reductase family 1, member C14
IEP
RGD
PMID:21047951
RGD:4145527
NCBI chr17:66,156,286...66,173,277
Ensembl chr17:66,156,288...66,173,277
G
Alk
ALK receptor tyrosine kinase
acts_upstream_of_or_within
ISO
MGI:5700373 (PMID:17487225)
RGD
PMID:17487225
NCBI chr 6:22,879,653...23,599,636
Ensembl chr 6:22,880,625...23,598,034
G
Anxa3
annexin A3
IEP
RGD
PMID:18493952
RGD:2302825
NCBI chr14:12,727,708...12,781,717
Ensembl chr14:12,719,795...12,781,617
G
Atg16l1
autophagy related 16-like 1
acts_upstream_of_or_within
ISO
MGI:4432181 (PMID:29078390)
RGD
PMID:29078390
NCBI chr 9:88,420,737...88,457,530
Ensembl chr 9:88,422,038...88,457,529
G
Atp2b4
ATPase plasma membrane Ca2+ transporting 4
IEP
RGD
PMID:16200642
RGD:6906893
NCBI chr13:45,156,137...45,255,292
Ensembl chr13:45,156,146...45,255,246
G
Bbs1
Bardet-Biedl syndrome 1
acts_upstream_of_or_within
ISO
MGI:3767672 (PMID:18032602)
RGD
PMID:18032602
NCBI chr 1:202,184,812...202,204,118
Ensembl chr 1:202,186,125...202,204,086
G
Bbs2
Bardet-Biedl syndrome 2
acts_upstream_of_or_within
ISO
MGI:3521669 (PMID:18032602)
RGD
PMID:18032602
NCBI chr19:10,909,653...10,944,998
Ensembl chr19:10,909,619...10,944,993
G
Bbs4
Bardet-Biedl syndrome 4
acts_upstream_of_or_within
ISO
MGI:3045473 (PMID:18032602), (PMID:24695551)
RGD
PMID:18032602 PMID:24695551
NCBI chr 8:59,731,912...59,765,408
Ensembl chr 8:59,731,912...59,765,607
G
Bcan
brevican
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2388924 (PMID:12370289)
Ensembl RGD
PMID:12370289
GO_REF:0000107
NCBI chr 2:173,454,479...173,467,717
Ensembl chr 2:173,454,482...173,467,460
G
Casp3
caspase 3
IEP
RGD
PMID:18459132
RGD:2293317
NCBI chr16:52,395,539...52,413,794
Ensembl chr16:45,662,910...45,684,648
G
Cdk5
cyclin-dependent kinase 5
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1861809 (PMID:11517264)
Ensembl RGD
PMID:11517264
GO_REF:0000107
NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
G
Cdk5r1
cyclin-dependent kinase 5 regulatory subunit 1
acts_upstream_of_or_within
ISO
MGI:1330828 (PMID:11517264)
RGD
PMID:11517264
NCBI chr10:65,484,266...65,485,467
Ensembl chr10:65,483,941...65,488,456
G
Cdk5r2
cyclin-dependent kinase 5 regulatory subunit 2
acts_upstream_of_or_within
ISO
MGI:101764 (PMID:11517264)
RGD
PMID:11517264
NCBI chr 9:76,416,251...76,417,719
Ensembl chr 9:76,416,062...76,418,344
G
Cfl1
cofilin 1
IEP
RGD
PMID:27073215
RGD:11568695
NCBI chr 1:202,796,012...202,801,337
Ensembl chr 1:202,786,627...202,817,587
G
Chrna2
cholinergic receptor nicotinic alpha 2 subunit
part_of
IEP
RGD
PMID:17046198
RGD:152995358
NCBI chr15:40,342,317...40,358,601
Ensembl chr15:40,342,317...40,358,601
G
Chrna5
cholinergic receptor nicotinic alpha 5 subunit
IEP
RGD
PMID:15558717
RGD:150530459
NCBI chr 8:55,369,794...55,398,526
Ensembl chr 8:55,369,794...55,398,146
G
Crk
CRK proto-oncogene, adaptor protein
acts_upstream_of_or_within
ISO
MGI:104686 (PMID:19074029)
RGD
PMID:19074029
NCBI chr10:60,530,469...60,556,703
Ensembl chr10:60,530,464...60,553,406
G
Crkl
CRK like proto-oncogene, adaptor protein
acts_upstream_of_or_within
ISO
MGI:88508 (PMID:19074029)
RGD
PMID:19074029
NCBI chr11:83,528,788...83,563,214
Ensembl chr11:83,526,530...83,563,238
G
Cyp11a1
cytochrome P450, family 11, subfamily a, polypeptide 1
IEP
RGD
PMID:21047951
RGD:4145527
NCBI chr 8:58,422,807...58,434,342
Ensembl chr 8:58,404,669...58,434,338
G
Cyp17a1
cytochrome P450, family 17, subfamily a, polypeptide 1
IEP
RGD
PMID:21047951
RGD:4145527
NCBI chr 1:255,476,861...255,484,547
Ensembl chr 1:245,535,462...245,541,573
G
Cyp19a1
cytochrome P450, family 19, subfamily a, polypeptide 1
IEP
RGD
PMID:21047951
RGD:4145527
NCBI chr 8:63,449,148...63,476,534
Ensembl chr 8:54,553,165...54,580,758
G
Dab1
DAB adaptor protein 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3777252 (PMID:18477607)
Ensembl RGD
PMID:18477607
GO_REF:0000107
NCBI chr 5:118,392,953...119,513,625
Ensembl chr 5:119,140,533...119,510,552
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Dclk2
doublecortin-like kinase 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1277171 (PMID:19342486)
Ensembl RGD
PMID:19342486
GO_REF:0000107
NCBI chr 2:172,202,733...172,338,411
Ensembl chr 2:172,208,706...172,338,250
G
Dcx
doublecortin
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1918012|MGI:2387757 (PMID:19342486)
Ensembl RGD
PMID:19342486
GO_REF:0000107
NCBI chr X:107,430,767...107,573,612
Ensembl chr X:107,430,767...107,507,476
G
Dlx1
distal-less homeobox 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:94902 (PMID:11163262)
Ensembl RGD
PMID:11163262
GO_REF:0000107
NCBI chr 3:56,356,190...56,360,780
Ensembl chr 3:56,356,190...56,360,780
G
Dlx2
distal-less homeobox 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:94901 (PMID:11163262)
Ensembl RGD
PMID:11163262
GO_REF:0000107
NCBI chr 3:56,370,238...56,373,581
Ensembl chr 3:56,370,483...56,373,597
G
Drd1
dopamine receptor D1
acts_upstream_of_or_within
ISO
MGI:2181426|MGI:3707260 (PMID:17360497)
RGD
PMID:17360497
NCBI chr17:10,540,440...10,544,971
Ensembl chr17:10,540,558...10,545,002
G
Eif2b2
eukaryotic translation initiation factor 2B subunit beta
IEP
RGD
PMID:12850562
RGD:11041879
NCBI chr 6:104,866,926...104,873,351
Ensembl chr 6:104,866,753...104,873,353
G
Eif2b3
eukaryotic translation initiation factor 2B subunit gamma
IEP
RGD
PMID:12850562
RGD:11041879
NCBI chr 5:130,492,167...130,558,692
Ensembl chr 5:130,492,220...130,563,332
G
Eif2b4
eukaryotic translation initiation factor 2B subunit delta
IEP
RGD
PMID:12850562
RGD:11041879
NCBI chr 6:25,183,177...25,188,832
Ensembl chr 6:25,183,186...25,188,829
G
Eif2b5
eukaryotic translation initiation factor 2B subunit epsilon
IEP
RGD
PMID:12850562
RGD:11041879
NCBI chr11:80,394,433...80,404,468
Ensembl chr11:80,394,433...80,404,419
G
Enpp1
ectonucleotide pyrophosphatase/phosphodiesterase 1
IEP
RGD
PMID:18565716
RGD:13204724
NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715
G
Epha5
EPH receptor A5
involved_in
ISS ISO
GO_REF:0000024 (PMID:12124402)
UniProt RGD
PMID:12124402
GO_REF:0000024
NCBI chr14:23,653,393...24,020,129
Ensembl chr14:23,653,393...24,017,317
G
Ezh1
enhancer of zeste 1 polycomb repressive complex 2 subunit
IEP
RGD
PMID:23932971
RGD:9587811
NCBI chr10:86,126,023...86,162,001
Ensembl chr10:86,126,015...86,161,921
G
Ezh2
enhancer of zeste 2 polycomb repressive complex 2 subunit
IEP
RGD
PMID:23932971
RGD:9587811
NCBI chr 4:76,624,399...76,687,362
Ensembl chr 4:76,624,399...76,687,362
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Fbxo41
F-box protein 41
acts_upstream_of_or_within
ISO
(PMID:35372812)
RGD
PMID:35372812
NCBI chr 4:118,007,517...118,039,547
Ensembl chr 4:118,010,978...118,039,406
G
Fez1
fasciculation and elongation protein zeta 1
IEP
RGD
PMID:14992819
RGD:13208825
NCBI chr 8:36,544,462...36,589,684
Ensembl chr 8:36,544,535...36,589,683
G
Fgf13
fibroblast growth factor 13
involved_in
ISS ISO
GO_REF:0000024 (PMID:22726441)
UniProt RGD
PMID:22726441
GO_REF:0000024
NCBI chr X:137,276,498...137,800,056
Ensembl chr X:137,276,511...137,800,391
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Gli3
GLI family zinc finger 3
acts_upstream_of_or_within
ISO
MGI:2684610|MGI:3798847 (PMID:22235033)
RGD
PMID:22235033
NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
G
Grin2a
glutamate ionotropic receptor NMDA type subunit 2A
IEP
RGD
PMID:19535712
RGD:2325978
NCBI chr10:5,629,683...6,053,262
Ensembl chr10:5,631,369...6,044,637
G
Grin2b
glutamate ionotropic receptor NMDA type subunit 2B
IEP
RGD
PMID:19535712
RGD:2325978
NCBI chr 4:168,580,824...169,044,110
Ensembl chr 4:168,599,546...169,042,279
G
Gsk3b
glycogen synthase kinase 3 beta
involved_in
ISO IEA
(PMID:19581563) GO_REF:0000107
RGD Ensembl
PMID:19581563
GO_REF:0000107
NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
G
Hdac1
histone deacetylase 1
acts_upstream_of_or_within
ISO
MGI:1097691 (PMID:19380719)
RGD
PMID:19380719
NCBI chr 5:141,853,992...141,881,057
Ensembl chr 5:141,853,989...141,881,111
G
Hdac2
histone deacetylase 2
acts_upstream_of_or_within
ISO
MGI:108086 (PMID:19380719)
RGD
PMID:19380719
NCBI chr20:40,548,244...40,571,609
Ensembl chr20:40,548,250...40,571,609
G
Hnrnpk
heterogeneous nuclear ribonucleoprotein K
IEP
RGD
PMID:22102872
RGD:10002783
NCBI chr17:6,262,936...6,275,001
Ensembl chr17:6,262,998...6,274,997
G
Hsd17b3
hydroxysteroid (17-beta) dehydrogenase 3
IEP
RGD
PMID:21047951
RGD:4145527
NCBI chr17:1,027,229...1,058,554
Ensembl chr17:1,027,229...1,058,554
G
Hsd17b7
hydroxysteroid (17-beta) dehydrogenase 7
IEP
RGD
PMID:21047951
RGD:4145527
NCBI chr13:82,170,079...82,190,018
Ensembl chr13:82,173,179...82,190,017
G
Hsd3b1
hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1
IEP
RGD
PMID:21047951
RGD:4145527
NCBI chr 2:186,169,864...186,175,984
Ensembl chr 2:186,169,863...186,175,999
G
Hsd3b2
hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2
IEP
RGD
PMID:21047951
RGD:4145527
NCBI chr 2:188,784,614...188,812,535
Ensembl chr 2:186,095,897...186,101,852
G
Htr5a
5-hydroxytryptamine receptor 5A
IEP
RGD
PMID:16572590
RGD:2316993
NCBI chr 4:7,444,968...7,454,651
Ensembl chr 4:7,444,968...7,454,651
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Id4
inhibitor of DNA binding 4
acts_upstream_of_or_within
ISO
MGI:3505549 (PMID:15469968)
RGD
PMID:15469968
NCBI chr17:16,389,387...16,391,956
Ensembl chr17:16,389,387...16,392,470
G
Igf1r
insulin-like growth factor 1 receptor
IEP
RGD
PMID:22042446
RGD:10403040
NCBI chr 1:121,549,831...121,838,548
Ensembl chr 1:121,550,743...121,831,777
G
Insr
insulin receptor
IEP
RGD
PMID:22042446
RGD:10403040
NCBI chr12:1,193,193...1,330,976
Ensembl chr12:1,197,100...1,330,883
G
Kcna1
potassium voltage-gated channel subfamily A member 1
involved_in
ISO
(PMID:17315199)
RGD
PMID:17315199
NCBI chr 4:159,464,223...159,472,905
Ensembl chr 4:159,464,188...159,472,682
G
Kcnq2
potassium voltage-gated channel subfamily Q member 2
acts_upstream_of_or_within
ISO
(PMID:15608631)
RGD
PMID:15608631
NCBI chr 3:168,194,776...168,253,831
Ensembl chr 3:168,195,357...168,275,071
G
Kdm6b
lysine demethylase 6B
IDA
RGD
PMID:23932971
RGD:9587811
NCBI chr10:54,120,716...54,142,212
Ensembl chr10:54,121,848...54,130,794
G
Kif14
kinesin family member 14
involved_in
ISO
(PMID:23308235)
RGD
PMID:23308235
NCBI chr13:47,926,975...47,990,598
Ensembl chr13:47,927,044...47,989,164
G
Kif5a
kinesin family member 5A
IEP
RGD
PMID:9349526
RGD:12792964
NCBI chr 7:63,051,894...63,089,024
Ensembl chr 7:63,049,424...63,092,858
G
Kif5b
kinesin family member 5B
IEP
RGD
PMID:9349526
RGD:12792964
NCBI chr17:51,489,904...51,527,508
Ensembl chr17:51,489,944...51,527,508
G
Kirrel3
kirre like nephrin family adhesion molecule 3
involved_in
ISO
(PMID:26575286)
RGD
PMID:26575286
NCBI chr 8:32,865,779...33,407,555
Ensembl chr 8:32,862,776...33,405,676
G
Lef1
lymphoid enhancer binding factor 1
acts_upstream_of_or_within
ISO
MGI:1933764 (PMID:10631168)
RGD
PMID:10631168
NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794
G
Lhx5
LIM homeobox 5
acts_upstream_of_or_within
ISO
MGI:2152620 (PMID:10325223)
RGD
PMID:10325223
NCBI chr12:36,126,186...36,134,625
Ensembl chr12:36,126,186...36,134,625
G
Lmx1a
LIM homeobox transcription factor 1 alpha
acts_upstream_of_or_within
ISO
MGI:1888413 (PMID:1638738)
RGD
PMID:1638738
NCBI chr13:79,834,614...79,978,253
Ensembl chr13:79,835,019...79,978,253
G
Lrp8
LDL receptor related protein 8
acts_upstream_of_or_within
ISO
MGI:109520 (PMID:17330141)
RGD
PMID:17330141
NCBI chr 5:122,563,468...122,635,434
Ensembl chr 5:122,563,453...122,631,352
G
Mas1
MAS1 proto-oncogene, G protein-coupled receptor
IEP
RGD
PMID:1521325
RGD:2316795
NCBI chr 1:47,879,956...47,911,500
Ensembl chr 1:47,880,309...47,911,709
G
Mdk
midkine
involved_in
ISO
(PMID:10096022)
RGD
PMID:10096022
NCBI chr 3:77,901,134...77,903,997
Ensembl chr 3:77,901,158...77,903,130
G
Mecp2
methyl CpG binding protein 2
IEP
RGD
PMID:14751287
RGD:12743658
NCBI chr X:151,781,177...151,844,687
Ensembl chr X:151,789,930...151,844,689
G
Mfsd2a
MFSD2 lysolipid transporter A, lysophospholipid
involved_in
ISO
(PMID:24828044)
RGD
PMID:24828044
NCBI chr 5:135,225,801...135,240,744
Ensembl chr 5:135,225,816...135,240,690
G
Mkks
MKKS centrosomal shuttling protein
acts_upstream_of_or_within
ISO
MGI:3526444 (PMID:18032602)
RGD
PMID:18032602
NCBI chr 3:124,201,877...124,221,142
Ensembl chr 3:124,201,877...124,220,162
G
Ncoa1
nuclear receptor coactivator 1
IEP
RGD
PMID:22085911
RGD:5688137
NCBI chr 6:27,232,609...27,507,992
Ensembl chr 6:27,232,611...27,475,664
G
Nefh
neurofilament heavy chain
IEP
RGD
PMID:14620872
RGD:9743946
NCBI chr14:79,830,362...79,840,347
Ensembl chr14:79,830,362...79,840,351
G
Nefl
neurofilament light chain
IEP
RGD
PMID:14620872
RGD:9743946
NCBI chr15:42,301,920...42,305,793
Ensembl chr15:42,301,916...42,305,793
G
Nefm
neurofilament medium chain
IEP
RGD
PMID:14620872
RGD:9743946
NCBI chr15:42,360,449...42,365,753
Ensembl chr15:42,360,454...42,365,755
G
Nf2
NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:23863479)
Ensembl RGD
PMID:23863479
GO_REF:0000107
NCBI chr14:79,627,399...79,710,709
Ensembl chr14:79,627,399...79,710,667
G
Nfix
nuclear factor I X
involved_in
ISO
MGI:3802571 (PMID:18477394), (PMID:23042739), (PMID:23776487), (PMID:23964093)
RGD
PMID:18477394 PMID:23042739 PMID:23776487 PMID:23964093
NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265
G
Nkx2-1
NK2 homeobox 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857494 (PMID:11163262)
Ensembl RGD
PMID:11163262
GO_REF:0000107
NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791
G
Nme1
NME/NM23 nucleoside diphosphate kinase 1
IEP
RGD
PMID:18493952
RGD:2302825
NCBI chr10:78,907,036...78,929,659
Ensembl chr10:78,906,083...78,916,408
G
Nog
noggin
IEP
RGD
PMID:15171992
RGD:10416525
NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339
G
Nr4a3
nuclear receptor subfamily 4, group A, member 3
acts_upstream_of_or_within
ISO
MGI:3037444 (PMID:15456880)
RGD
PMID:15456880
NCBI chr 5:62,361,588...62,401,489
Ensembl chr 5:62,361,822...62,402,733
G
Ogdh
oxoglutarate dehydrogenase
involved_in
IEA ISO
GO_REF:0000107 (PMID:16901643)
Ensembl RGD
PMID:16901643
GO_REF:0000107
NCBI chr14:81,150,021...81,217,479
Ensembl chr14:81,150,091...81,217,479
G
Pafah1b1
platelet-activating factor acetylhydrolase 1b, regulatory subunit 1
acts_upstream_of_or_within
ISO
MGI:1340044|MGI:2384054 (PMID:10729324), (PMID:17330141)
RGD
PMID:10729324 PMID:17330141
NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808
G
Pebp1
phosphatidylethanolamine binding protein 1
IEP
RGD
PMID:18493952
RGD:2302825
NCBI chr12:39,302,864...39,307,064
Ensembl chr12:39,302,840...39,307,862
G
Phlpp1
PH domain and leucine rich repeat protein phosphatase 1
IEP
RGD
PMID:20819118
RGD:8693633
NCBI chr13:22,308,532...22,530,978
Ensembl chr13:22,308,548...22,530,977
G
Phlpp2
PH domain and leucine rich repeat protein phosphatase 2
IEP
RGD
PMID:20819118
RGD:8693633
NCBI chr19:37,835,125...37,901,804
Ensembl chr19:37,835,125...37,905,513
G
Plxna3
plexin A3
acts_upstream_of_or_within
ISO
MGI:2386961 (PMID:11683995)
RGD
PMID:11683995
NCBI chr X:152,115,699...152,131,608
Ensembl chr X:152,115,819...152,131,603
G
Ppp1r9b
protein phosphatase 1, regulatory subunit 9B
IEP
RGD
PMID:21123436
RGD:10043818
NCBI chr10:79,938,055...79,954,085
Ensembl chr10:79,938,066...79,954,083
G
Ptprs
protein tyrosine phosphatase, receptor type, S
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2158734 (PMID:15842738)
Ensembl RGD
PMID:15842738
GO_REF:0000107
NCBI chr 9:1,245,408...1,307,015
Ensembl chr 9:1,245,410...1,306,947
G
Ptprz1
protein tyrosine phosphatase, receptor type Z1
IEP
RGD
PMID:10906718
RGD:9589828
NCBI chr 4:51,397,316...51,595,220
Ensembl chr 4:51,397,601...51,595,218
G
Ran
RAN, member RAS oncogene family
IEP
RGD
PMID:18493952
RGD:2302825
NCBI chr12:27,674,049...27,678,598
Ensembl chr12:27,674,050...27,678,276
G
Rara
retinoic acid receptor, alpha
IEP
RGD
PMID:18619947
RGD:8693612
NCBI chr10:83,883,490...83,928,932
Ensembl chr10:83,893,384...83,928,142
G
Reln
reelin
involved_in
IEA ISO
GO_REF:0000107 (PMID:17229826)
Ensembl RGD
PMID:17229826
GO_REF:0000107
NCBI chr 4:12,736,177...13,162,956
Ensembl chr 4:12,736,130...13,162,211
G
Sct
secretin
involved_in
ISS ISO
GO_REF:0000024 (PMID:18534766)
UniProt RGD
PMID:18534766
GO_REF:0000024
NCBI chr 1:196,382,857...196,383,668
Ensembl chr 1:196,382,856...196,383,658
G
Sema6b
semaphorin 6B
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:20484647) GO_REF:0000107
UniProt RGD Ensembl
PMID:20484647
GO_REF:0000024 GO_REF:0000107
NCBI chr 9:950,939...967,905
Ensembl chr 9:950,939...961,521
G
Slc17a6
solute carrier family 17 member 6
IEP
RGD
PMID:18502731
RGD:9999204
NCBI chr 1:101,212,489...101,252,543
Ensembl chr 1:101,212,489...101,252,542
G
Slc32a1
solute carrier family 32 member 1
IEP
RGD
PMID:18502731
RGD:9999204
NCBI chr 3:147,267,373...147,271,842
Ensembl chr 3:147,267,373...147,271,844
G
Srd5a1
steroid 5 alpha-reductase 1
IEP
RGD
PMID:8770891
RGD:4892048
NCBI chr 1:33,686,069...33,720,468
Ensembl chr 1:33,686,391...33,720,461
G
Srd5a2
steroid 5 alpha-reductase 2
IEP
RGD
PMID:21047951
RGD:4145527
NCBI chr 6:21,426,225...21,465,727
Ensembl chr 6:21,426,215...21,462,112
G
Srf
serum response factor
acts_upstream_of_or_within
ISO
MGI:2181426|MGI:2385464 (PMID:15837932)
RGD
PMID:15837932
NCBI chr 9:14,426,453...14,435,734
Ensembl chr 9:14,426,472...14,435,733
G
Tent2
terminal nucleotidyltransferase 2
IEP
RGD
PMID:24074826
RGD:9684936
NCBI chr 2:24,380,135...24,432,099
Ensembl chr 2:24,380,225...24,432,099
G
Tp73
tumor protein p73
acts_upstream_of_or_within
ISO
MGI:1859911 (PMID:10716451)
RGD
PMID:10716451
NCBI chr 5:164,621,377...164,703,958
Ensembl chr 5:164,621,377...164,681,128
G
Tsc1
TSC complex subunit 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2176055|MGI:2656240 (PMID:17522300)
Ensembl RGD
PMID:17522300
GO_REF:0000107
NCBI chr 3:11,969,547...12,018,591
Ensembl chr 3:11,979,729...12,015,674
G
Tsku
tsukushi, small leucine rich proteoglycan
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:31983064) GO_REF:0000024
Ensembl RGD UniProt
PMID:31983064
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:152,660,259...152,671,682
Ensembl chr 1:152,656,693...152,672,588
G
Tuba1a
tubulin, alpha 1A
involved_in
ISO
MGI:3617352 (PMID:17218254)
RGD
PMID:17218254
NCBI chr 7:130,113,214...130,116,880
Ensembl chr 7:130,081,032...130,196,186
G
Uba6
ubiquitin-like modifier activating enzyme 6
acts_upstream_of_or_within
ISO
MGI:2176173|MGI:5509054 (PMID:23499007)
RGD
PMID:23499007
NCBI chr14:21,884,039...21,947,857
Ensembl chr14:21,884,039...21,947,857
G
Uqcrq
ubiquinol-cytochrome c reductase, complex III subunit VII
involved_in
ISO
(PMID:16901643)
RGD
PMID:16901643
NCBI chr10:37,585,864...37,589,328
Ensembl chr10:37,586,888...37,589,169
G
Usp9x
ubiquitin specific peptidase 9, X-linked
acts_upstream_of_or_within
ISO
MGI:5438072 (PMID:23861879)
RGD
PMID:23861879
NCBI chr X:9,588,825...9,726,993
Ensembl chr X:9,588,825...9,696,711
G
Wnt3a
Wnt family member 3A
acts_upstream_of_or_within
ISO
MGI:1857489 (PMID:10631167)
RGD
PMID:10631167
NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324
G
Xrcc1
X-ray repair cross complementing 1
acts_upstream_of_or_within
ISO
MGI:3836442 (PMID:19633665)
RGD
PMID:19633665
NCBI chr 1:80,140,495...80,168,705
Ensembl chr 1:80,141,207...80,168,701
G
Xrn2
5'-3' exoribonuclease 2
IEP
RGD
PMID:23933240
RGD:9684963
NCBI chr 3:134,436,916...134,509,308
Ensembl chr 3:134,437,109...134,509,306
G
Ywhae
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2667341 (PMID:12796778)
Ensembl RGD
PMID:12796778
GO_REF:0000107
NCBI chr10:60,584,665...60,622,352
Ensembl chr10:60,584,652...60,671,589
G
Zbtb18
zinc finger and BTB domain containing 18
acts_upstream_of_or_within
ISO
MGI:3851929 (PMID:19409883)
RGD
PMID:19409883
NCBI chr13:89,439,501...89,447,958
Ensembl chr13:89,439,420...89,448,862
G
Zeb2
zinc finger E-box binding homeobox 2
acts_upstream_of_or_within
ISO
MGI:2387499|MGI:2684610 (PMID:17644613)
RGD
PMID:17644613
NCBI chr 3:29,214,581...29,344,890
Ensembl chr 3:29,218,301...29,345,157
G
Zic1
Zic family member 1
involved_in
ISO
MGI:106676 (PMID:17507568)
RGD
PMID:17507568
NCBI chr 8:91,908,548...91,918,020
Ensembl chr 8:91,908,576...91,912,731
G
Zic3
Zic family member 3
involved_in
ISO
MGI:106683 (PMID:17507568)
RGD
PMID:17507568
NCBI chr X:136,123,662...136,129,627
Ensembl chr X:136,124,026...136,134,746
G
Arl13b
ARF like GTPase 13B
involved_in
ISO
(PMID:23153492)
RGD
PMID:23153492
NCBI chr11:150,100...217,103
Ensembl chr11:150,955...217,197
G
Gli3
GLI family zinc finger 3
acts_upstream_of_or_within
ISO
MGI:1856282 (PMID:20943929)
RGD
PMID:20943929
NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
G
Aqp1
aquaporin 1
involved_in
ISO IEP
(PMID:16133142)
RGD
PMID:16133142 PMID:16133142
RGD:8553876
NCBI chr 4:84,482,512...84,494,690
Ensembl chr 4:84,482,512...84,494,690
G
Atp1b2
ATPase Na+/K+ transporting subunit beta 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:7525597)
Ensembl RGD
PMID:7525597
GO_REF:0000107
NCBI chr10:54,318,698...54,324,933
Ensembl chr10:54,318,701...54,324,933
G
Dbi
diazepam binding inhibitor
acts_upstream_of_or_within
ISO
(PMID:17150371)
RGD
PMID:17150371
NCBI chr13:31,241,466...31,249,853
Ensembl chr13:31,206,988...31,268,693
G
Dnah5
dynein, axonemal, heavy chain 5
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2180081 (PMID:11912187)
Ensembl RGD
PMID:11912187
GO_REF:0000107
NCBI chr 2:78,937,788...79,255,551
Ensembl chr 2:78,937,800...79,254,890
G
Dpcd
deleted in primary ciliary dyskinesia
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:20080492)
Ensembl RGD
PMID:20080492
GO_REF:0000107
NCBI chr 1:244,408,766...244,426,891
Ensembl chr 1:244,408,785...244,426,888
G
Kdm2b
lysine demethylase 2B
involved_in
ISO
(PMID:21220025)
RGD
PMID:21220025
NCBI chr12:33,566,530...33,701,366
Ensembl chr12:33,574,657...33,701,355
G
Myh10
myosin heavy chain 10
acts_upstream_of_or_within
ISO
MGI:2386439|MGI:2386445 (PMID:10712438), (PMID:11283949), (PMID:9356462)
RGD
PMID:9356462 PMID:10712438 PMID:11283949
NCBI chr10:53,393,901...53,525,174
Ensembl chr10:53,394,389...53,525,165
G
Nfix
nuclear factor I X
involved_in acts_upstream_of_or_within
ISO
MGI:3714028 (PMID:25960350) MGI:3802571 (PMID:29452604)
RGD
PMID:25960350 PMID:29452604
NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265
G
Numb
NUMB, endocytic adaptor protein
involved_in
IEA ISO
GO_REF:0000107 (PMID:17174898)
Ensembl RGD
PMID:17174898
GO_REF:0000107
NCBI chr 6:103,431,400...103,553,422
Ensembl chr 6:103,431,400...103,553,354
G
Numbl
NUMB-like, endocytic adaptor protein
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:17174898) GO_REF:0000107
UniProt RGD Ensembl
PMID:17174898
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:82,549,814...82,573,788
Ensembl chr 1:82,550,054...82,573,776
G
Pax5
paired box 5
acts_upstream_of_or_within
ISO
MGI:2386577 (PMID:23349049)
RGD
PMID:23349049
NCBI chr 5:58,763,334...58,945,719
Ensembl chr 5:58,765,036...58,944,326
G
Rpgrip1l
Rpgrip1-like
acts_upstream_of_or_within
ISO
MGI:3716208 (PMID:17558409)
RGD
PMID:17558409
NCBI chr19:15,692,189...15,785,083
Ensembl chr19:15,692,150...15,785,083
G
Tsku
tsukushi, small leucine rich proteoglycan
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:4867728 (PMID:21055390)
Ensembl RGD
PMID:21055390
GO_REF:0000107
NCBI chr 1:152,660,259...152,671,682
Ensembl chr 1:152,656,693...152,672,588
G
Uchl5
ubiquitin C-terminal hydrolase L5
involved_in
ISO
(PMID:21048919)
RGD
PMID:21048919
NCBI chr13:55,520,722...55,556,503
Ensembl chr13:55,520,729...55,556,502
G
Adgrg1
adhesion G protein-coupled receptor G1
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:18509043) GO_REF:0000107
UniProt RGD Ensembl
PMID:18509043
GO_REF:0000024 GO_REF:0000107
NCBI chr19:10,003,963...10,041,122
Ensembl chr19:10,003,975...10,041,108
G
Cdk5
cyclin-dependent kinase 5
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1861809 (PMID:11517264)
Ensembl RGD
PMID:11517264
GO_REF:0000107
NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
G
Cdk5r1
cyclin-dependent kinase 5 regulatory subunit 1
acts_upstream_of_or_within
ISO
MGI:1330828 (PMID:11517264)
RGD
PMID:11517264
NCBI chr10:65,484,266...65,485,467
Ensembl chr10:65,483,941...65,488,456
G
Cdk5r2
cyclin-dependent kinase 5 regulatory subunit 2
acts_upstream_of_or_within
ISO
MGI:101764 (PMID:11517264)
RGD
PMID:11517264
NCBI chr 9:76,416,251...76,417,719
Ensembl chr 9:76,416,062...76,418,344
G
Col3a1
collagen type III alpha 1 chain
involved_in
ISO
(PMID:22235340)
RGD
PMID:22235340
NCBI chr 9:47,374,611...47,410,547
Ensembl chr 9:47,374,593...47,410,547
G
Ctnnb1
catenin beta 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2148567|MGI:3701617 (PMID:20503375)
Ensembl RGD
PMID:20503375
GO_REF:0000107
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
G
Dab2ip
DAB2 interacting protein
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:23056358) GO_REF:0000107
UniProt RGD Ensembl
PMID:23056358
GO_REF:0000024 GO_REF:0000107
NCBI chr 3:18,915,290...19,086,282
Ensembl chr 3:18,915,290...19,086,280
G
Dcx
doublecortin
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2387757 (PMID:19342486)
Ensembl RGD
PMID:19342486
GO_REF:0000107
NCBI chr X:107,430,767...107,573,612
Ensembl chr X:107,430,767...107,507,476
G
Gli3
GLI family zinc finger 3
acts_upstream_of_or_within
ISO
MGI:2176173|MGI:3798847 (PMID:21525285)
RGD
PMID:21525285
NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
G
Lrp8
LDL receptor related protein 8
acts_upstream_of_or_within
ISO
MGI:109520 (PMID:17330141)
RGD
PMID:17330141
NCBI chr 5:122,563,468...122,635,434
Ensembl chr 5:122,563,453...122,631,352
G
Mboat7
membrane bound O-acyltransferase domain containing 7
acts_upstream_of_or_within
ISO
MGI:5509338 (PMID:23097495)
RGD
PMID:23097495
NCBI chr 1:65,525,206...65,539,538
Ensembl chr 1:65,525,213...65,539,538
G
Nr2e1
nuclear receptor subfamily 2, group E, member 1
acts_upstream_of_or_within
ISO
MGI:2151350 (PMID:15385616)
RGD
PMID:15385616
NCBI chr20:46,050,134...46,071,257
Ensembl chr20:46,050,414...46,073,949
G
Pafah1b1
platelet-activating factor acetylhydrolase 1b, regulatory subunit 1
acts_upstream_of_or_within
ISO
MGI:1340044 (PMID:17330141)
RGD
PMID:17330141
NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808
G
Reln
reelin
involved_in acts_upstream_of_or_within
IEA ISO ISS
GO_REF:0000107 (PMID:10880573) GO_REF:0000024 MGI:1856398 (PMID:20847152)
Ensembl RGD UniProt
PMID:10880573 PMID:20847152
GO_REF:0000024 GO_REF:0000107
NCBI chr 4:12,736,177...13,162,956
Ensembl chr 4:12,736,130...13,162,211
G
Socs7
suppressor of cytokine signaling 7
acts_upstream_of_or_within
ISO
MGI:5545789 (PMID:24210661)
RGD
PMID:24210661
NCBI chr10:82,352,159...82,388,829
Ensembl chr10:82,351,680...82,388,830
G
Ulk4
unc-51 like kinase 4
acts_upstream_of_or_within
ISO
(PMID:34235142)
RGD
PMID:34235142
NCBI chr 8:120,670,879...120,966,026
Ensembl chr 8:120,670,866...120,966,924
G
Bmerb1
bMERB domain containing 1
acts_upstream_of_or_within
ISO
(PMID:25099998)
RGD
PMID:25099998
NCBI chr10:1,779,834...1,946,586
Ensembl chr10:1,779,835...1,946,575
G
Lamb1
laminin subunit beta 1
involved_in
ISO
(PMID:23472759)
RGD
PMID:23472759
NCBI chr 6:47,835,492...47,902,585
Ensembl chr 6:47,835,525...47,902,585
G
Sun1
Sad1 and UNC84 domain containing 1
involved_in
ISO
(PMID:19874786)
RGD
PMID:19874786
NCBI chr12:15,396,378...15,441,277
Ensembl chr12:15,396,381...15,441,571
G
Sun2
Sad1 and UNC84 domain containing 2
involved_in
ISO
(PMID:19874786)
RGD
PMID:19874786
NCBI chr 7:111,275,374...111,292,565
Ensembl chr 7:111,275,380...111,292,553
G
Syne2
spectrin repeat containing nuclear envelope protein 2
involved_in
ISO
(PMID:19874786)
RGD
PMID:19874786
NCBI chr 6:94,537,088...94,848,085
Ensembl chr 6:94,537,088...94,848,064
G
Aldh1a3
aldehyde dehydrogenase 1 family, member A3
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3512079 (PMID:17207476)
Ensembl RGD
PMID:17207476
GO_REF:0000107
NCBI chr 1:119,982,272...120,017,416
Ensembl chr 1:119,982,277...120,017,436
G
Agtpbp1
ATP/GTP binding carboxypeptidase 1
involved_in
ISO
(PMID:11884758)
RGD
PMID:11884758
NCBI chr17:5,120,540...5,238,874
Ensembl chr17:5,120,609...5,238,869
G
Ak1
adenylate kinase 1
IEP
RGD
PMID:9920788
RGD:632499
NCBI chr 3:15,912,431...15,923,045
Ensembl chr 3:15,912,485...15,923,041
G
Ak3
adenylate kinase 3
IEP
RGD
PMID:9920788
RGD:632499
NCBI chr 1:226,737,472...226,764,647
Ensembl chr 1:226,739,318...226,764,625
G
Arx
aristaless related homeobox
acts_upstream_of_or_within
ISO
MGI:2429693 (PMID:15677725)
RGD
PMID:15677725
NCBI chr X:58,016,233...58,028,149
Ensembl chr X:58,016,233...58,028,142
G
Chd7
chromodomain helicase DNA binding protein 7
acts_upstream_of_or_within
ISO
MGI:3707678 (PMID:19279158)
RGD
PMID:19279158
NCBI chr 5:21,812,007...21,995,358
Ensembl chr 5:21,812,070...21,995,358
G
Crtac1
cartilage acidic protein 1
acts_upstream_of_or_within
ISO
(PMID:21817055)
RGD
PMID:21817055
NCBI chr 1:241,091,679...241,233,677
Ensembl chr 1:241,078,864...241,233,421
G
Csf1r
colony stimulating factor 1 receptor
involved_in
IEA ISO
GO_REF:0000107 (PMID:22542597)
Ensembl RGD
PMID:22542597
GO_REF:0000107
NCBI chr18:54,546,673...54,590,418
Ensembl chr18:54,546,659...54,590,415
G
Dlx2
distal-less homeobox 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857828 (PMID:7590232)
Ensembl RGD
PMID:7590232
GO_REF:0000107
NCBI chr 3:56,370,238...56,373,581
Ensembl chr 3:56,370,483...56,373,597
G
Dpysl2
dihydropyrimidinase-like 2
IEP
RGD
PMID:14751288
RGD:2316247
NCBI chr15:41,005,551...41,111,724
Ensembl chr15:41,005,551...41,111,829
G
Efna2
ephrin A2
IEP
RGD
PMID:12234653
RGD:634733
NCBI chr 7:9,515,635...9,528,071
Ensembl chr 7:9,516,429...9,527,061
G
Enpp1
ectonucleotide pyrophosphatase/phosphodiesterase 1
IEP
RGD
PMID:18565716
RGD:13204724
NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715
G
Eomes
eomesodermin
acts_upstream_of_or_within
ISO
MGI:3774027 (PMID:19435790)
RGD
PMID:19435790
NCBI chr 8:118,181,340...118,189,186
Ensembl chr 8:118,181,777...118,188,316
G
Ext1
exostosin glycosyltransferase 1
acts_upstream_of_or_within
ISO
MGI:2176173|MGI:2682061 (PMID:14605369)
RGD
PMID:14605369
NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357
G
Fezf1
Fez family zinc finger 1
acts_upstream_of_or_within
ISO
MGI:3626294 (PMID:16971467)
RGD
PMID:16971467
NCBI chr 4:51,762,751...51,766,078
Ensembl chr 4:51,762,751...51,766,078
G
Fut1
fucosyltransferase 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:16884711)
UniProt RGD
PMID:16884711
GO_REF:0000024
NCBI chr 1:96,086,934...96,090,352
Ensembl chr 1:96,086,635...96,090,616
G
Gsx2
GS homeobox 2
involved_in
ISO
MGI:4412067 (PMID:28814342)
RGD
PMID:28814342
NCBI chr14:33,123,799...33,126,151
Ensembl chr14:33,124,381...33,126,105
G
Id2
inhibitor of DNA binding 2
acts_upstream_of_or_within
ISO
MGI:3830733 (PMID:19109490)
RGD
PMID:19109490
NCBI chr 6:41,740,556...41,742,393
Ensembl chr 6:41,728,946...41,744,400
G
Kif14
kinesin family member 14
involved_in
ISO
(PMID:23308235), (PMID:24931760)
RGD
PMID:23308235 PMID:24931760
NCBI chr13:47,926,975...47,990,598
Ensembl chr13:47,927,044...47,989,164
G
Lhx2
LIM homeobox 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:4399044 (PMID:19820705)
Ensembl RGD
PMID:19820705
GO_REF:0000107
NCBI chr 3:22,113,619...22,143,909
Ensembl chr 3:22,126,007...22,143,908
G
Lrrk2
leucine-rich repeat kinase 2
involved_in
ISO
(PMID:21168496)
RGD
PMID:21168496
NCBI chr 7:122,826,696...122,987,711
Ensembl chr 7:122,826,696...122,987,703
G
Mecp2
methyl CpG binding protein 2
IEP
RGD
PMID:12605461
RGD:12790706
NCBI chr X:151,781,177...151,844,687
Ensembl chr X:151,789,930...151,844,689
G
Nfix
nuclear factor I X
involved_in
ISO
MGI:3802571 (PMID:25331604)
RGD
PMID:25331604
NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265
G
Nr2e1
nuclear receptor subfamily 2, group E, member 1
acts_upstream_of_or_within
ISO
MGI:2151350|MGI:2176490 (PMID:11997145), (PMID:12527005)
RGD
PMID:11997145 PMID:12527005
NCBI chr20:46,050,134...46,071,257
Ensembl chr20:46,050,414...46,073,949
G
Pax6
paired box 6
IMP
RGD
PMID:14736749
RGD:8552333
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
G
Pcnt
pericentrin
acts_upstream_of_or_within
ISO
MGI:3799303 (PMID:20096683)
RGD
PMID:20096683
NCBI chr20:12,190,597...12,278,723
Ensembl chr20:12,191,648...12,278,710
G
Rpgrip1l
Rpgrip1-like
acts_upstream_of_or_within
ISO
MGI:3716208 (PMID:17558409)
RGD
PMID:17558409
NCBI chr19:15,692,189...15,785,083
Ensembl chr19:15,692,150...15,785,083
G
Sall1
spalt-like transcription factor 1
acts_upstream_of_or_within
ISO
MGI:2388379 (PMID:18024993)
RGD
PMID:18024993
NCBI chr19:18,005,782...18,022,705
Ensembl chr19:18,007,503...18,022,705
G
Sema3a
semaphorin 3A
involved_in
ISO ISS
(PMID:22416012) GO_REF:0000024
RGD UniProt
PMID:22416012
GO_REF:0000024
NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
G
Ski
Ski proto-oncogene
acts_upstream_of_or_within
ISO
MGI:2177555 (PMID:11731796)
RGD
PMID:11731796
NCBI chr 5:165,713,525...165,782,134
Ensembl chr 5:165,714,093...165,782,733
G
Slit1
slit guidance ligand 1
acts_upstream_of_or_within
ISO
MGI:1315205 (PMID:12097499)
RGD
PMID:12097499
NCBI chr 1:240,409,559...240,558,127
Ensembl chr 1:240,409,561...240,558,127
G
Slit2
slit guidance ligand 2
acts_upstream_of_or_within
ISO
MGI:1315203 (PMID:12097499)
RGD
PMID:12097499
NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
G
Ttc8
tetratricopeptide repeat domain 8
acts_upstream_of_or_within
ISO
MGI:5140723 (PMID:21646512)
RGD
PMID:21646512
NCBI chr 6:118,198,186...118,252,422
Ensembl chr 6:118,198,201...118,252,418
G
Zic1
Zic family member 1
involved_in
ISO
MGI:106676 (PMID:17507568)
RGD
PMID:17507568
NCBI chr 8:91,908,548...91,918,020
Ensembl chr 8:91,908,576...91,912,731
G
Zic3
Zic family member 3
involved_in
ISO
MGI:106683 (PMID:17507568), (PMID:28814342)
RGD
PMID:17507568 PMID:28814342
NCBI chr X:136,123,662...136,129,627
Ensembl chr X:136,124,026...136,134,746
G
Atf5
activating transcription factor 5
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:5467393 (PMID:23090999)
Ensembl RGD
PMID:23090999
GO_REF:0000107
NCBI chr 1:95,295,602...95,299,755
Ensembl chr 1:95,295,610...95,299,707
G
Robo1
roundabout guidance receptor 1
involved_in
ISO
UniProtKB:Q7TPD3 (PMID:17360927)
RGD
PMID:17360927
NCBI chr11:10,580,863...11,621,675
Ensembl chr11:10,580,908...11,620,203
G
Robo2
roundabout guidance receptor 2
involved_in
ISO
(PMID:17360927)
RGD
PMID:17360927
NCBI chr11:12,528,949...14,096,726
Ensembl chr11:12,528,951...13,041,536
G
Sall3
spalt-like transcription factor 3
acts_upstream_of_or_within
ISO
MGI:3052730 (PMID:18260139)
RGD
PMID:18260139
NCBI chr18:74,406,066...74,425,974
Ensembl chr18:74,407,560...74,426,789
G
Wnt5a
Wnt family member 5A
involved_in
IEA ISO
GO_REF:0000107 (PMID:21539518)
Ensembl RGD
PMID:21539518
GO_REF:0000107
NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234
G
Atf5
activating transcription factor 5
acts_upstream_of_or_within
ISO
MGI:5467393 (PMID:23090999)
RGD
PMID:23090999
NCBI chr 1:95,295,602...95,299,755
Ensembl chr 1:95,295,610...95,299,707
G
Dicer1
dicer 1 ribonuclease III
acts_upstream_of_or_within
ISO
(PMID:18184563)
RGD
PMID:18184563
NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
G
Dlx5
distal-less homeobox 5
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2180475 (PMID:25937343)
Ensembl RGD
PMID:25937343
GO_REF:0000107
NCBI chr 4:34,999,139...35,003,504
Ensembl chr 4:34,999,139...35,003,407
G
Erbb4
erb-b2 receptor tyrosine kinase 4
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:15543145) GO_REF:0000107
UniProt RGD Ensembl
PMID:15543145
GO_REF:0000024 GO_REF:0000107
NCBI chr 9:69,523,733...70,596,743
Ensembl chr 9:69,531,481...70,596,595
G
Gsx2
GS homeobox 2
acts_upstream_of_or_within
ISO
MGI:2150162 (PMID:11060228)
RGD
PMID:11060228
NCBI chr14:33,123,799...33,126,151
Ensembl chr14:33,124,381...33,126,105
G
Mir200a
microRNA 200a
acts_upstream_of_or_within
ISO
(PMID:25937343)
RGD
PMID:25937343
NCBI chr 5:166,648,494...166,648,582
G
Mir200b
microRNA 200b
acts_upstream_of_or_within
ISO
(PMID:25937343)
RGD
PMID:25937343
NCBI chr 5:166,649,272...166,649,366
Ensembl chr 5:166,649,272...166,649,366
G
Mir200c
microRNA 200c
acts_upstream_of_or_within
ISO
(PMID:25937343)
RGD
PMID:25937343
NCBI chr 4:157,523,679...157,523,747
G
Mir9-3
microRNA 9-3
acts_upstream_of_or_within
ISO
(PMID:25937343)
RGD
PMID:25937343
NCBI chr 1:133,440,049...133,440,138
G
Sall1
spalt-like transcription factor 1
involved_in
ISO
(PMID:18024993)
RGD
PMID:18024993
NCBI chr19:18,005,782...18,022,705
Ensembl chr19:18,007,503...18,022,705
G
Uncx
UNC homeobox
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1928812 (PMID:20692344)
Ensembl RGD
PMID:20692344
GO_REF:0000107
NCBI chr12:15,092,779...15,097,300
Ensembl chr12:15,092,784...15,097,300
G
Ogdh
oxoglutarate dehydrogenase
involved_in
IEA ISO
GO_REF:0000107 (PMID:16901643)
Ensembl RGD
PMID:16901643
GO_REF:0000107
NCBI chr14:81,150,021...81,217,479
Ensembl chr14:81,150,091...81,217,479
G
Pax6
paired box 6
IMP
RGD
PMID:14736749
RGD:8552333
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
G
Sall1
spalt-like transcription factor 1
involved_in
ISO
(PMID:18024993)
RGD
PMID:18024993
NCBI chr19:18,005,782...18,022,705
Ensembl chr19:18,007,503...18,022,705
G
Atp1a2
ATPase Na+/K+ transporting subunit alpha 2
acts_upstream_of_or_within
ISO
(PMID:12805306)
RGD
PMID:12805306
NCBI chr13:84,729,597...84,754,544
Ensembl chr13:84,729,601...84,754,544
G
Atf5
activating transcription factor 5
acts_upstream_of_or_within
ISO
MGI:5467393 (PMID:23090999)
RGD
PMID:23090999
NCBI chr 1:95,295,602...95,299,755
Ensembl chr 1:95,295,610...95,299,707
G
Htt
huntingtin
acts_upstream_of_or_within
ISO
MGI:2675580 (PMID:12926013)
RGD
PMID:12926013
NCBI chr14:75,845,836...75,996,094
Ensembl chr14:75,845,836...75,995,070
G
Sema7a
semaphorin 7A (John Milton Hagen blood group)
acts_upstream_of_or_within
ISO
MGI:2683867 (PMID:12879062)
RGD
PMID:12879062
NCBI chr 8:58,348,448...58,370,536
Ensembl chr 8:58,348,448...58,370,536
G
Igf2bp1
insulin-like growth factor 2 mRNA binding protein 1
acts_upstream_of_or_within
ISO
MGI:3043746 (PMID:24192035)
RGD
PMID:24192035
NCBI chr10:80,908,300...80,951,097
Ensembl chr10:80,908,076...80,951,129
G
Fgf8
fibroblast growth factor 8
acts_upstream_of_or_within
ISO
MGI:1857843|MGI:2150348 (PMID:16613831)
RGD
PMID:16613831
NCBI chr 1:244,584,477...244,590,578
Ensembl chr 1:244,584,652...244,590,359
G
Gli3
GLI family zinc finger 3
acts_upstream_of_or_within
ISO
MGI:1856276 (PMID:10409502)
RGD
PMID:10409502
NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
G
Pax6
paired box 6
acts_upstream_of_or_within
ISO
MGI:1856158 (PMID:11124115)
RGD
PMID:11124115
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
G
Fgfr1
Fibroblast growth factor receptor 1
IMP
RGD
PMID:20083104
RGD:2325172
NCBI chr16:66,491,930...66,547,161
Ensembl chr16:66,494,042...66,547,350
G
Foxp2
forkhead box P2
involved_in
ISO IEA
(PMID:11872605) GO_REF:0000107
RGD Ensembl
PMID:11872605
GO_REF:0000107
NCBI chr 4:43,133,827...43,712,442
Ensembl chr 4:43,133,912...43,711,683
G
Disc1
DISC1 scaffold protein
IMP
RGD
PMID:16299498
RGD:5509783
NCBI chr19:53,014,201...53,223,617
Ensembl chr19:53,014,616...53,219,778
G
Foxg1
forkhead box G1
acts_upstream_of_or_within
ISO
(PMID:22726835)
RGD
PMID:22726835
NCBI chr 6:66,674,797...66,677,611
Ensembl chr 6:66,666,587...66,678,607
G
Zmiz1
zinc finger, MIZ-type containing 1
involved_in
ISO
(PMID:30639322)
RGD
PMID:30639322
NCBI chr16:1,027,083...1,232,616
Ensembl chr16:1,027,325...1,232,597
G
Ascl1
achaete-scute family bHLH transcription factor 1
acts_upstream_of_or_within
ISO
MGI:1857470 (PMID:9876181)
RGD
PMID:9876181
NCBI chr 7:21,903,136...21,906,003
Ensembl chr 7:21,903,126...21,905,993
G
Bcl11b
BCL11 transcription factor B
acts_upstream_of_or_within
ISO
MGI:2663971 (PMID:18199763)
RGD
PMID:18199763
NCBI chr 6:126,834,531...126,927,720
Ensembl chr 6:126,834,531...126,928,224
G
Inhba
inhibin subunit beta A
involved_in
ISO
(PMID:25804741)
RGD
PMID:25804741
NCBI chr17:49,091,635...49,111,573
Ensembl chr17:49,095,920...49,108,982
G
Shank3
SH3 and multiple ankyrin repeat domains 3
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:21423165) GO_REF:0000024
Ensembl RGD BHF-UCL
PMID:21423165
GO_REF:0000024 GO_REF:0000107
NCBI chr 7:120,568,707...120,630,796
Ensembl chr 7:120,570,402...120,630,374
G
Zswim6
zinc finger, SWIM-type containing 6
involved_in
ISO
(PMID:28433741)
RGD
PMID:28433741
NCBI chr 2:39,211,131...39,378,877
Ensembl chr 2:39,212,949...39,378,924
G
Bbs1
Bardet-Biedl syndrome 1
acts_upstream_of_or_within
ISO
MGI:3767672 (PMID:18032602)
RGD
PMID:18032602
NCBI chr 1:202,184,812...202,204,118
Ensembl chr 1:202,186,125...202,204,086
G
Bbs2
Bardet-Biedl syndrome 2
acts_upstream_of_or_within
ISO
MGI:3521669 (PMID:18032602)
RGD
PMID:18032602
NCBI chr19:10,909,653...10,944,998
Ensembl chr19:10,909,619...10,944,993
G
Bbs4
Bardet-Biedl syndrome 4
acts_upstream_of_or_within
ISO
MGI:3045473 (PMID:18032602)
RGD
PMID:18032602
NCBI chr 8:59,731,912...59,765,408
Ensembl chr 8:59,731,912...59,765,607
G
Cntnap2
contactin associated protein 2
involved_in
ISO
(PMID:18179893)
RGD
PMID:18179893
NCBI chr 4:74,109,455...76,366,434
Ensembl chr 4:74,109,472...76,362,027
G
Drd1
dopamine receptor D1
acts_upstream_of_or_within involved_in
IEP ISO IEA
MGI:2181426|MGI:3707260 (PMID:17360497) GO_REF:0000107
RGD Ensembl
PMID:17360497 PMID:22015925
GO_REF:0000107, RGD:7248608
NCBI chr17:10,540,440...10,544,971
Ensembl chr17:10,540,558...10,545,002
G
Drd2
dopamine receptor D2
IEP
RGD
PMID:22015925
RGD:7248608
NCBI chr 8:58,605,403...58,669,339
Ensembl chr 8:49,708,927...49,772,875
G
Enpp1
ectonucleotide pyrophosphatase/phosphodiesterase 1
IEP
RGD
PMID:18565716
RGD:13204724
NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715
G
Foxp1
forkhead box P1
IEP
RGD
PMID:12815709
RGD:11536004
NCBI chr 4:131,559,599...132,155,092
Ensembl chr 4:131,564,756...132,112,258
G
Hprt1
hypoxanthine phosphoribosyltransferase 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857299 (PMID:9886073)
Ensembl RGD
PMID:9886073
GO_REF:0000107
NCBI chr X:132,736,175...132,768,149
Ensembl chr X:132,736,096...132,768,154
G
Htt
huntingtin
acts_upstream_of_or_within
ISO
MGI:2177751|MGI:2177753|MGI:2177757 (PMID:11030759), (PMID:17715336)
RGD
PMID:11030759 PMID:17715336
NCBI chr14:75,845,836...75,996,094
Ensembl chr14:75,845,836...75,995,070
G
Lrrk2
leucine-rich repeat kinase 2
IEP
RGD
PMID:18272292
RGD:13462055
NCBI chr 7:122,826,696...122,987,711
Ensembl chr 7:122,826,696...122,987,703
G
Mecp2
methyl CpG binding protein 2
IEP
RGD
PMID:12605461
RGD:12790706
NCBI chr X:151,781,177...151,844,687
Ensembl chr X:151,789,930...151,844,689
G
Mkks
MKKS centrosomal shuttling protein
acts_upstream_of_or_within
ISO
MGI:3526444 (PMID:18032602)
RGD
PMID:18032602
NCBI chr 3:124,201,877...124,221,142
Ensembl chr 3:124,201,877...124,220,162
G
Ogdh
oxoglutarate dehydrogenase
involved_in
IEA ISO
GO_REF:0000107 (PMID:16901643)
Ensembl RGD
PMID:16901643
GO_REF:0000107
NCBI chr14:81,150,021...81,217,479
Ensembl chr14:81,150,091...81,217,479
G
Rarb
retinoic acid receptor, beta
acts_upstream_of_or_within
ISO
MGI:1857851 (PMID:18443282)
RGD
PMID:18443282
NCBI chr15:8,700,533...9,051,288
Ensembl chr15:8,406,492...9,051,288
G
Secisbp2
SECIS binding protein 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2181426|MGI:5583885 (PMID:24844465)
Ensembl RGD
PMID:24844465
GO_REF:0000107
NCBI chr17:13,538,513...13,569,573
Ensembl chr17:13,538,513...13,569,523
G
Slc7a11
solute carrier family 7 member 11
acts_upstream_of_or_within
ISO
MGI:1857061 (PMID:17035536)
RGD
PMID:17035536
NCBI chr 2:134,382,002...134,517,622
Ensembl chr 2:133,963,107...134,517,536
G
Slitrk5
SLIT and NTRK-like family, member 5
acts_upstream_of_or_within
ISO
MGI:4459459 (PMID:20418887)
RGD
PMID:20418887
NCBI chr15:88,848,123...88,858,809
Ensembl chr15:88,847,535...88,856,836
G
Dlx1
distal-less homeobox 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:94902|MGI:95843 (PMID:23042297)
Ensembl RGD
PMID:23042297
GO_REF:0000107
NCBI chr 3:56,356,190...56,360,780
Ensembl chr 3:56,356,190...56,360,780
G
Dlx2
distal-less homeobox 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:94901|MGI:95843 (PMID:23042297)
Ensembl RGD
PMID:23042297
GO_REF:0000107
NCBI chr 3:56,370,238...56,373,581
Ensembl chr 3:56,370,483...56,373,597
G
Fgf8
fibroblast growth factor 8
acts_upstream_of_or_within
ISO
MGI:1857843|MGI:2150348 (PMID:16613831)
RGD
PMID:16613831
NCBI chr 1:244,584,477...244,590,578
Ensembl chr 1:244,584,652...244,590,359
G
Gli3
GLI family zinc finger 3
acts_upstream_of_or_within
ISO
MGI:1856282 (PMID:20943929)
RGD
PMID:20943929
NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
G
Gsx2
GS homeobox 2
acts_upstream_of_or_within
ISO
MGI:94901|MGI:94902 (PMID:23042297)
RGD
PMID:23042297
NCBI chr14:33,123,799...33,126,151
Ensembl chr14:33,124,381...33,126,105
G
Ascl1
achaete-scute family bHLH transcription factor 1
acts_upstream_of_or_within
ISO
MGI:1857470 (PMID:9876181)
RGD
PMID:9876181
NCBI chr 7:21,903,136...21,906,003
Ensembl chr 7:21,903,126...21,905,993
G
Gsx2
GS homeobox 2
acts_upstream_of_or_within
ISO
MGI:2150162 (PMID:11124115)
RGD
PMID:11124115
NCBI chr14:33,123,799...33,126,151
Ensembl chr14:33,124,381...33,126,105
G
Cntnap2
contactin associated protein 2
involved_in
ISO
(PMID:18179893)
RGD
PMID:18179893
NCBI chr 4:74,109,455...76,366,434
Ensembl chr 4:74,109,472...76,362,027
G
Gsk3b
glycogen synthase kinase 3 beta
involved_in
ISO IEA
(PMID:19581563) GO_REF:0000107
RGD Ensembl
PMID:19581563
GO_REF:0000107
NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
G
Fgfr1
Fibroblast growth factor receptor 1
IMP
RGD
PMID:20083104
RGD:2325172
NCBI chr16:66,491,930...66,547,161
Ensembl chr16:66,494,042...66,547,350
G
Lrrk2
leucine-rich repeat kinase 2
involved_in
ISO
(PMID:21168496)
RGD
PMID:21168496
NCBI chr 7:122,826,696...122,987,711
Ensembl chr 7:122,826,696...122,987,703
G
Ogdh
oxoglutarate dehydrogenase
involved_in
IEA ISO
GO_REF:0000107 (PMID:16901643)
Ensembl RGD
PMID:16901643
GO_REF:0000107
NCBI chr14:81,150,021...81,217,479
Ensembl chr14:81,150,091...81,217,479
G
Slit1
slit guidance ligand 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2179459 (PMID:14960623)
Ensembl RGD
PMID:14960623
GO_REF:0000107
NCBI chr 1:240,409,559...240,558,127
Ensembl chr 1:240,409,561...240,558,127
G
Srf
serum response factor
acts_upstream_of_or_within
ISO
MGI:2181426|MGI:2385464 (PMID:15837932)
RGD
PMID:15837932
NCBI chr 9:14,426,453...14,435,734
Ensembl chr 9:14,426,472...14,435,733
G
Cxcl12
C-X-C motif chemokine ligand 12
IMP
RGD
PMID:16971524
RGD:2306584
NCBI chr 4:150,388,326...150,401,173
Ensembl chr 4:150,388,325...150,401,168
G
Cxcr4
C-X-C motif chemokine receptor 4
IMP
RGD
PMID:16971524
RGD:2306584
NCBI chr13:40,077,976...40,081,883
Ensembl chr13:40,077,976...40,081,883
G
Foxb1
forkhead box B1
involved_in
ISO
(PMID:19046377)
RGD
PMID:19046377
NCBI chr 8:70,407,221...70,409,841
Ensembl chr 8:70,408,186...70,409,781
G
Nkx2-1
NK2 homeobox 1
acts_upstream_of_or_within
ISO
MGI:3653645 (PMID:18786357), (PMID:20181579)
RGD
PMID:18786357 PMID:20181579
NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791
G
Slit1
slit guidance ligand 1
acts_upstream_of_or_within
ISO
MGI:1315205 (PMID:14960623)
RGD
PMID:14960623
NCBI chr 1:240,409,559...240,558,127
Ensembl chr 1:240,409,561...240,558,127
G
Slit2
slit guidance ligand 2
acts_upstream_of_or_within
ISO
MGI:1315203 (PMID:14960623)
RGD
PMID:14960623
NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
G
Tnr
tenascin R
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2154583 (PMID:15034584)
Ensembl RGD
PMID:15034584
GO_REF:0000107
NCBI chr13:71,751,714...72,172,731
Ensembl chr13:72,091,585...72,167,641
G
Bmp2
bone morphogenetic protein 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:96785 (PMID:11719201)
Ensembl RGD
PMID:11719201
GO_REF:0000107
NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
G
Bmp4
bone morphogenetic protein 4
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:96785 (PMID:11719201), (PMID:16855091)
Ensembl RGD
PMID:11719201 PMID:16855091
GO_REF:0000107
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
G
Gsx2
GS homeobox 2
acts_upstream_of_or_within
ISO
MGI:2150162 (PMID:18701439)
RGD
PMID:18701439
NCBI chr14:33,123,799...33,126,151
Ensembl chr14:33,124,381...33,126,105
G
Lhx2
LIM homeobox 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1890208|MGI:88177|MGI:88180 (PMID:11719201)
Ensembl RGD
PMID:11719201
GO_REF:0000107
NCBI chr 3:22,113,619...22,143,909
Ensembl chr 3:22,126,007...22,143,908
G
Otx2
orthodenticle homeobox 2
acts_upstream_of_or_within
ISO
MGI:2178753|MGI:3665330 (PMID:26166575)
RGD
PMID:26166575
NCBI chr15:21,942,233...21,953,034
Ensembl chr15:21,943,191...21,953,416
G
Pax6
paired box 6
acts_upstream_of_or_within
ISO
MGI:1856155 (PMID:18701439)
RGD
PMID:18701439
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
G
Shh
sonic hedgehog signaling molecule
acts_upstream_of_or_within involved_in
IMP ISO IEA
MGI:1857796 (PMID:11060228) GO_REF:0000107
RGD Ensembl
PMID:11060228 PMID:9811591
GO_REF:0000107, RGD:2306311
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
G
Six3
SIX homeobox 3
involved_in
ISO
(PMID:18694563)
RGD
PMID:18694563
NCBI chr 6:9,039,017...9,043,336
Ensembl chr 6:9,036,434...9,053,301
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all