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ONTOLOGY REPORT - ANNOTATIONS

Term:dorsal spinal cord development
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Accession:GO:0021516 term browser browse the term
Definition:The process whose specific outcome is the progression of the dorsal region of the spinal cord over time, from its formation to the mature structure. The dorsal region of the mature spinal cord contains neurons that process and relay sensory input.


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dorsal spinal cord development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Daam2 dishevelled associated activator of morphogenesis 2 involved_in ISO
IEA		 (PMID:22227309)
GO_REF:0000107		 RGD
Ensembl		 PMID:22227309 GO_REF:0000107 NCBI chr 9:11,428,913...11,546,982
Ensembl chr 9:11,428,724...11,545,497 		JBrowse link
G Draxin dorsal inhibitory axon guidance protein involved_in IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000104
(PMID:19150847)		 GO_Central
UniProt
RGD		 PMID:19150847 GO_REF:0000033 GO_REF:0000104 NCBI chr 5:158,530,149...158,563,457
Ensembl chr 5:158,530,342...158,564,483 		JBrowse link
G Drgx dorsal root ganglia homeobox acts_upstream_of_or_within ISO
IEA		 MGI:2182636 (PMID:16978876)
GO_REF:0000107		 RGD
Ensembl		 PMID:16978876 GO_REF:0000107 NCBI chr16:7,854,849...7,884,404
Ensembl chr16:7,854,849...7,900,600 		JBrowse link
G Gdnf glial cell derived neurotrophic factor involved_in IEA
ISO		 GO_REF:0000107
(PMID:22998873)		 Ensembl
RGD		 PMID:22998873 GO_REF:0000107 NCBI chr 2:56,894,022...56,919,935
Ensembl chr 2:56,895,010...56,917,209 		JBrowse link
G Hoxb8 homeo box B8 acts_upstream_of_or_within ISO MGI:1934178 (PMID:10559485), (PMID:18430798) RGD PMID:10559485 PMID:18430798 NCBI chr10:81,248,313...81,251,261
Ensembl chr10:81,248,887...81,250,638 		JBrowse link
G Pbx3 PBX homeobox 3 acts_upstream_of_or_within ISO
IEA		 MGI:3773271|MGI:3773272 (PMID:18155191)
GO_REF:0000107		 RGD
Ensembl		 PMID:18155191 GO_REF:0000107 NCBI chr 3:17,488,691...17,682,412
Ensembl chr 3:17,488,693...17,682,791 		JBrowse link
G Uncx UNC homeobox acts_upstream_of_or_within ISO
IEA		 MGI:1859373|MGI:1928812 (PMID:10804168), (PMID:10804169)
GO_REF:0000107		 RGD
Ensembl		 PMID:10804168 PMID:10804169 GO_REF:0000107 NCBI chr12:15,092,779...15,097,300
Ensembl chr12:15,092,784...15,097,300 		JBrowse link
spinal cord association neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within ISO
IEA		 MGI:1857470 (PMID:16715081)
GO_REF:0000107		 RGD
Ensembl		 PMID:16715081 GO_REF:0000107 NCBI chr 7:21,903,136...21,906,003
Ensembl chr 7:21,903,126...21,905,993 		JBrowse link
G Gdf7 growth differentiation factor 7 acts_upstream_of_or_within ISO MGI:2386906 (PMID:10693795) RGD PMID:10693795 NCBI chr 6:31,171,495...31,182,484
Ensembl chr 6:31,178,119...31,182,447 		JBrowse link
G Gsx1 GS homeobox 1 acts_upstream_of_or_within ISO
IEA		 MGI:95843 (PMID:16715081)
GO_REF:0000107		 RGD
Ensembl		 PMID:16715081 GO_REF:0000107 NCBI chr12:7,880,663...7,882,947
Ensembl chr12:7,881,460...7,882,753 		JBrowse link
G Gsx2 GS homeobox 2 acts_upstream_of_or_within ISO
IEA		 MGI:95842 (PMID:16715081)
GO_REF:0000107		 RGD
Ensembl		 PMID:16715081 GO_REF:0000107 NCBI chr14:33,123,799...33,126,151
Ensembl chr14:33,124,381...33,126,105 		JBrowse link
G Lhx1 LIM homeobox 1 involved_in ISS
ISO
IEA		 GO_REF:0000024
UniProtKB:P61375 (PMID:17166926)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:17166926 GO_REF:0000024 GO_REF:0000107 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617 		JBrowse link
G Lhx3 LIM homeobox 3 acts_upstream_of_or_within ISO
IEA		 (PMID:19323994)
GO_REF:0000107		 RGD
Ensembl		 PMID:19323994 GO_REF:0000107 NCBI chr 3:9,026,432...9,035,122
Ensembl chr 3:9,027,425...9,034,480 		JBrowse link
G Lhx5 LIM homeobox 5 involved_in ISO
IEA		 UniProtKB:P63006 (PMID:17166926)
GO_REF:0000107		 RGD
Ensembl		 PMID:17166926 GO_REF:0000107 NCBI chr12:36,126,186...36,134,625
Ensembl chr12:36,126,186...36,134,625 		JBrowse link
G Lmo4 LIM domain only 4 acts_upstream_of_or_within ISO MGI:98480 (PMID:19323994) RGD PMID:19323994 NCBI chr 2:233,264,180...233,280,881
Ensembl chr 2:233,264,182...233,280,880 		JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in IEP PMID:15019943 HGNC-UCL PMID:15019943 RGD:8554528 NCBI chr20:7,900,327...7,964,309
Ensembl chr20:7,904,358...7,963,471 		JBrowse link
G Pax3 paired box 3 acts_upstream_of_or_within ISO MGI:97491 (PMID:9858722) RGD PMID:9858722 NCBI chr 9:79,567,455...79,664,042
Ensembl chr 9:79,568,634...79,664,042 		JBrowse link
G Pax7 paired box 7 acts_upstream_of_or_within ISO
IEA		 MGI:97487 (PMID:9858722)
GO_REF:0000107		 RGD
Ensembl		 PMID:9858722 GO_REF:0000107 NCBI chr 5:151,996,368...152,098,023
Ensembl chr 5:151,999,092...152,097,979 		JBrowse link
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor acts_upstream_of_or_within ISO
IEA		 MGI:109360 (PMID:19323994)
GO_REF:0000107		 RGD
Ensembl		 PMID:19323994 GO_REF:0000107 NCBI chr 5:128,586,776...128,600,976
Ensembl chr 5:128,587,701...128,600,976 		JBrowse link
G Wnt1 Wnt family member 1 acts_upstream_of_or_within ISO
IEA		 MGI:98956 (PMID:11877374)
GO_REF:0000107		 RGD
Ensembl		 PMID:11877374 GO_REF:0000107 NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651 		JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO
IEA		 MGI:98953 (PMID:11877374)
GO_REF:0000107		 RGD
Ensembl		 PMID:11877374 GO_REF:0000107 NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20558
    developmental process 7149
      anatomical structure development 6646
        dorsal spinal cord development 21
          regulation of cell proliferation in dorsal spinal cord + 0
          spinal cord association neuron differentiation + 14
Path 2
Term Annotations click to browse term
  biological_process 20558
    developmental process 7149
      anatomical structure development 6646
        multicellular organism development 5353
          system development 4635
            nervous system development 2872
              central nervous system development 1232
                spinal cord development 145
                  dorsal spinal cord development 21
                    regulation of cell proliferation in dorsal spinal cord + 0
                    spinal cord association neuron differentiation + 14
paths to the root