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ONTOLOGY REPORT - ANNOTATIONS

Term:antigen processing and presentation of endogenous antigen
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Accession:GO:0019883 term browser browse the term
Definition:The process in which an antigen-presenting cell expresses antigen (peptide or lipid) of endogenous origin on its cell surface in association with an MHC protein complex.
Synonyms:exact_synonym: antigen presentation, endogenous antigen

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antigen processing and presentation of endogenous antigen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg5 autophagy related 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23382543) Ensembl
MGI		 PMID:23382543 GO_REF:0000107 NCBI chrNW_004624780:15,987,483...16,124,158
Ensembl chrNW_004624780:15,987,397...16,124,151 		JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2m beta-2-microglobulin involved_in ISO (PMID:24643698) BHF-UCL PMID:24643698 NCBI chrNW_004624804:11,514,728...11,521,625 JBrowse link
G Ide insulin degrading enzyme involved_in ISO (PMID:20364150) UniProt PMID:20364150 NCBI chrNW_004624737:3,708,309...3,822,390
Ensembl chrNW_004624737:3,702,985...3,835,776 		JBrowse link
G Tap1 transporter 1, ATP binding cassette subfamily B member involved_in ISO (PMID:11133832) UniProt PMID:11133832 NCBI chrNW_004624754:23,815,464...23,822,480
Ensembl chrNW_004624754:23,815,915...23,822,827 		JBrowse link
G Tap2 transporter 2, ATP binding cassette subfamily B member acts_upstream_of_or_within
involved_in		 ISO
IEA		 PMID:1758495 MGI
InterPro		 PMID:1758495 GO_REF:0000002 RGD:1299069 NCBI chrNW_004624754:23,827,782...23,845,690
Ensembl chrNW_004624754:23,827,706...23,837,356 		JBrowse link
G Tapbp TAP binding protein involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624754:23,513,060...23,521,169
Ensembl chrNW_004624754:23,509,436...23,520,135 		JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-dependent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tap2 transporter 2, ATP binding cassette subfamily B member acts_upstream_of_or_within ISO (PMID:1538753) MGI PMID:1538753 NCBI chrNW_004624754:23,827,782...23,845,690
Ensembl chrNW_004624754:23,827,706...23,837,356 		JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-independent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Azgp1 alpha-2-glycoprotein 1, zinc-binding involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624740:17,054,221...17,062,420
Ensembl chrNW_004624740:17,054,221...17,063,226 		JBrowse link
G LOC101718838 NKG2D ligand 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624785:8,176,353...8,180,741 JBrowse link
G LOC101721592 class I histocompatibility antigen, Gogo-B*0102 alpha chain-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624754:24,680,008...24,683,547
Ensembl chrNW_004624754:24,680,085...24,683,925 		JBrowse link
G LOC101721938 saoe class I histocompatibility antigen, A alpha chain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624754:24,729,408...24,730,158 JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class Ib term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Azgp1 alpha-2-glycoprotein 1, zinc-binding involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624740:17,054,221...17,062,420
Ensembl chrNW_004624740:17,054,221...17,063,226 		JBrowse link
G LOC101718838 NKG2D ligand 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624785:8,176,353...8,180,741 JBrowse link
G LOC101721592 class I histocompatibility antigen, Gogo-B*0102 alpha chain-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624754:24,680,008...24,683,547
Ensembl chrNW_004624754:24,680,085...24,683,925 		JBrowse link
G LOC101721938 saoe class I histocompatibility antigen, A alpha chain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624754:24,729,408...24,730,158 JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-dependent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tap2 transporter 2, ATP binding cassette subfamily B member involved_in
acts_upstream_of_or_within		 ISO (PMID:1538751)
(PMID:1538753)		 UniProt
MGI		 PMID:1538751 PMID:1538753 NCBI chrNW_004624754:23,827,782...23,845,690
Ensembl chrNW_004624754:23,827,706...23,837,356 		JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101706353 HLA class II histocompatibility antigen, DR alpha chain involved_in ISO (PMID:15322540) UniProt PMID:15322540 NCBI chrNW_004624754:24,079,459...24,086,342
Ensembl chrNW_004624754:24,079,366...24,084,512 		JBrowse link
antigen processing and presentation, endogenous lipid antigen via MHC class Ib term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101697206 T-cell surface glycoprotein CD1c3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624805:5,853,594...5,856,018 JBrowse link
negative regulation of antigen processing and presentation of endogenous peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hfe homeostatic iron regulator involved_in ISO (PMID:24643698) BHF-UCL PMID:24643698 NCBI chrNW_004624756:821,738...831,482
Ensembl chrNW_004624756:823,947...831,376 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17653
    immune system process 2285
      antigen processing and presentation 93
        antigen processing and presentation of endogenous antigen 13
          antigen processing and presentation of endogenous peptide antigen + 11
          antigen processing and presentation, endogenous lipid antigen via MHC class Ib 1
paths to the root