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ONTOLOGY REPORT - ANNOTATIONS

Term:antigen processing and presentation of endogenous antigen
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Accession:GO:0019883 term browser browse the term
Definition:The process in which an antigen-presenting cell expresses antigen (peptide or lipid) of endogenous origin on its cell surface in association with an MHC protein complex.
Synonyms:exact_synonym: antigen presentation, endogenous antigen

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antigen processing and presentation of endogenous antigen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg5 autophagy related 5 acts_upstream_of_or_within ISO (PMID:23382543) MGI PMID:23382543 NCBI chrNW_004955411:31,501,191...31,646,407
Ensembl chrNW_004955411:31,522,420...31,646,827 		JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2m beta-2-microglobulin involved_in ISO (PMID:24643698) BHF-UCL PMID:24643698 NCBI chrNW_004955416:11,205,503...11,211,325
Ensembl chrNW_004955416:11,204,849...11,215,568 		JBrowse link
G Ide insulin degrading enzyme involved_in ISO (PMID:20364150) UniProt PMID:20364150 NCBI chrNW_004955425:819,461...926,440
Ensembl chrNW_004955425:847,615...926,318 		JBrowse link
G Tap1 transporter 1, ATP binding cassette subfamily B member involved_in ISO (PMID:11133832) UniProt PMID:11133832 NCBI chrNW_004955437:1,504,549...1,511,110
Ensembl chrNW_004955437:1,504,947...1,511,097 		JBrowse link
G Tap2 transporter 2, ATP binding cassette subfamily B member involved_in
acts_upstream_of_or_within		 ISO (PMID:8496691)
PMID:1758495
(PMID:1538751)		 UniProt
MGI		 PMID:1538751 PMID:1758495 PMID:8496691 RGD:1299069 NCBI chrNW_004955437:1,480,217...1,499,032
Ensembl chrNW_004955437:1,477,341...1,498,575 		JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-dependent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tap2 transporter 2, ATP binding cassette subfamily B member acts_upstream_of_or_within ISO (PMID:1538753) MGI PMID:1538753 NCBI chrNW_004955437:1,480,217...1,499,032
Ensembl chrNW_004955437:1,477,341...1,498,575 		JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-dependent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tap2 transporter 2, ATP binding cassette subfamily B member involved_in
acts_upstream_of_or_within		 ISO (PMID:1538751)
(PMID:1538753)		 UniProt
MGI		 PMID:1538751 PMID:1538753 NCBI chrNW_004955437:1,480,217...1,499,032
Ensembl chrNW_004955437:1,477,341...1,498,575 		JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC102019320 mamu class II histocompatibility antigen, DR alpha chain involved_in ISO (PMID:15322540) UniProt PMID:15322540 NCBI chrNW_004955437:1,109,735...1,114,742
Ensembl chrNW_004955437:1,109,713...1,114,802 		JBrowse link
negative regulation of antigen processing and presentation of endogenous peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hfe homeostatic iron regulator involved_in ISO (PMID:24643698) BHF-UCL PMID:24643698 NCBI chrNW_004955483:933,269...941,070
Ensembl chrNW_004955483:932,352...941,143 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12619
    immune system process 2046
      antigen processing and presentation 78
        antigen processing and presentation of endogenous antigen 7
          antigen processing and presentation of endogenous peptide antigen + 6
          antigen processing and presentation, endogenous lipid antigen via MHC class Ib 0
paths to the root