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ONTOLOGY REPORT - ANNOTATIONS

Term:antigen processing and presentation of endogenous antigen
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Accession:GO:0019883 term browser browse the term
Definition:The process in which an antigen-presenting cell expresses antigen (peptide or lipid) of endogenous origin on its cell surface in association with an MHC protein complex.
Synonyms:exact_synonym: antigen presentation, endogenous antigen


show annotations for term's descendants           Sort by:
antigen processing and presentation of endogenous antigen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG5 autophagy related 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:103,997,824...104,140,931
Ensembl chr 6:107,871,208...108,013,807 		JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2M beta-2-microglobulin involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:23,668,108...23,674,791
Ensembl chr15:41,836,345...41,842,991 		JBrowse link
G IDE insulin degrading enzyme involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:89,196,295...89,320,223
Ensembl chr10:92,716,540...92,833,353 		JBrowse link
G TAP1 transporter 1, ATP binding cassette subfamily B member involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:32,414,665...32,423,488
Ensembl chr 6:33,530,171...33,538,978 		JBrowse link
G TAP2 transporter 2, ATP binding cassette subfamily B member acts_upstream_of_or_within
involved_in		 ISO
IEA		 PMID:1758495 MGI
Ensembl
InterPro		 PMID:1758495 GO_REF:0000002 GO_REF:0000107 RGD:1299069 NCBI chr 6:32,394,586...32,408,297
Ensembl chr 6:33,507,332...33,523,750 		JBrowse link
G TAPBP TAP binding protein involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:32,871,768...32,886,679
Ensembl chr 6:33,986,058...34,000,190 		JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-dependent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TAP2 transporter 2, ATP binding cassette subfamily B member acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:32,394,586...32,408,297
Ensembl chr 6:33,507,332...33,523,750 		JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-independent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100977055 patr class I histocompatibility antigen, alpha chain E involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:30,233,293...30,238,056
Ensembl chr 6:31,101,251...31,107,262 		JBrowse link
G LOC100978457 patr class I histocompatibility antigen, CH28 alpha chain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:29,523,929...29,529,385
Ensembl chr 6:30,181,133...30,186,082 		JBrowse link
G LOC100978774 patr class I histocompatibility antigen, alpha chain G involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:29,616,091...29,620,270
Ensembl chr 6:30,286,395...30,390,865 		JBrowse link
G LOC100979338 putative HLA class I histocompatibility antigen, alpha chain H involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:29,663,779...29,667,352
Ensembl chr 6:30,333,360...30,391,211 		JBrowse link
G LOC100980965 zinc-alpha-2-glycoprotein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:91,999,717...92,009,066
Ensembl chr 7:105,432,782...105,442,219 		JBrowse link
G LOC100982294 class I histocompatibility antigen, Gogo-C*0202 alpha chain involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:31,020,373...31,024,959
Ensembl chr 6:31,910,788...31,914,286 		JBrowse link
G LOC100982859 class I histocompatibility antigen, Gogo-B*0101 alpha chain involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:31,106,562...31,109,933
Ensembl chr 6:31,997,381...32,000,067 		JBrowse link
G LOC100985629 UL16-binding protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:147,744,025...147,751,795 JBrowse link
G LOC100988536 UL-16 binding protein 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:147,719,511...147,725,765
Ensembl chr 6:152,424,827...152,430,940 		JBrowse link
G MHC-A patr class I histocompatibility antigen, A-2 alpha chain-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:29,718,578...29,721,648
Ensembl chr 6:30,333,360...30,391,211 		JBrowse link
G RAET1E retinoic acid early transcript 1E involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:147,695,601...147,703,327
Ensembl chr 6:152,400,887...152,408,583 		JBrowse link
G RAET1L retinoic acid early transcript 1L involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:147,831,368...147,836,716 JBrowse link
G ULBP1 UL16 binding protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:147,798,494...147,811,888
Ensembl chr 6:152,477,350...152,486,911 		JBrowse link
G ULBP3 UL16 binding protein 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:147,875,098...147,882,746
Ensembl chr 6:152,581,662...152,588,430 		JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class Ib term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100977055 patr class I histocompatibility antigen, alpha chain E involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:30,233,293...30,238,056
Ensembl chr 6:31,101,251...31,107,262 		JBrowse link
G LOC100978457 patr class I histocompatibility antigen, CH28 alpha chain involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:29,523,929...29,529,385
Ensembl chr 6:30,181,133...30,186,082 		JBrowse link
G LOC100978774 patr class I histocompatibility antigen, alpha chain G involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:29,616,091...29,620,270
Ensembl chr 6:30,286,395...30,390,865 		JBrowse link
G LOC100979338 putative HLA class I histocompatibility antigen, alpha chain H involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:29,663,779...29,667,352
Ensembl chr 6:30,333,360...30,391,211 		JBrowse link
G LOC100980965 zinc-alpha-2-glycoprotein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:91,999,717...92,009,066
Ensembl chr 7:105,432,782...105,442,219 		JBrowse link
G LOC100982294 class I histocompatibility antigen, Gogo-C*0202 alpha chain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:31,020,373...31,024,959
Ensembl chr 6:31,910,788...31,914,286 		JBrowse link
G LOC100982859 class I histocompatibility antigen, Gogo-B*0101 alpha chain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:31,106,562...31,109,933
Ensembl chr 6:31,997,381...32,000,067 		JBrowse link
G LOC100985629 UL16-binding protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:147,744,025...147,751,795 JBrowse link
G LOC100988536 UL-16 binding protein 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:147,719,511...147,725,765
Ensembl chr 6:152,424,827...152,430,940 		JBrowse link
G MHC-A patr class I histocompatibility antigen, A-2 alpha chain-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:29,718,578...29,721,648
Ensembl chr 6:30,333,360...30,391,211 		JBrowse link
G RAET1E retinoic acid early transcript 1E involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:147,695,601...147,703,327
Ensembl chr 6:152,400,887...152,408,583 		JBrowse link
G RAET1L retinoic acid early transcript 1L involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:147,831,368...147,836,716 JBrowse link
G ULBP1 UL16 binding protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:147,798,494...147,811,888
Ensembl chr 6:152,477,350...152,486,911 		JBrowse link
G ULBP3 UL16 binding protein 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:147,875,098...147,882,746
Ensembl chr 6:152,581,662...152,588,430 		JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-dependent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100977055 patr class I histocompatibility antigen, alpha chain E acts_upstream_of_or_within ISO (PMID:1538753) MGI PMID:1538753 NCBI chr 6:30,233,293...30,238,056
Ensembl chr 6:31,101,251...31,107,262 		JBrowse link
G TAP2 transporter 2, ATP binding cassette subfamily B member involved_in
acts_upstream_of_or_within		 IEA Ensembl GO_REF:0000107 NCBI chr 6:32,394,586...32,408,297
Ensembl chr 6:33,507,332...33,523,750 		JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100987081 HLA class II histocompatibility antigen, DR alpha chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:32,105,421...32,110,579
Ensembl chr 6:32,982,228...32,987,417 		JBrowse link
antigen processing and presentation, endogenous lipid antigen via MHC class Ib term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD1A CD1a molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:133,574,983...133,617,542
Ensembl chr 1:137,403,872...137,407,057 		JBrowse link
G CD1B CD1b molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:133,686,155...133,689,732
Ensembl chr 1:137,476,898...137,480,471 		JBrowse link
G CD1C CD1c molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:133,647,482...133,651,575
Ensembl chr 1:137,437,235...137,441,075 		JBrowse link
G CD1D CD1d molecule involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:133,549,258...133,557,752
Ensembl chr 1:137,341,690...137,348,173 		JBrowse link
G LOC100985794 T-cell surface glycoprotein CD1e, membrane-associated involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:133,712,012...133,716,093
Ensembl chr 1:137,502,315...137,506,799 		JBrowse link
negative regulation of antigen processing and presentation of endogenous peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HFE homeostatic iron regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:25,921,663...25,930,852
Ensembl chr 6:26,580,358...26,588,591 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19315
    immune system process 2521
      antigen processing and presentation 109
        antigen processing and presentation of endogenous antigen 27
          antigen processing and presentation of endogenous peptide antigen + 21
          antigen processing and presentation, endogenous lipid antigen via MHC class Ib 5
paths to the root