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ONTOLOGY REPORT - ANNOTATIONS


Term:antigen processing and presentation
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Accession:GO:0019882 term browser browse the term
Definition:The process in which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex.
Synonyms:exact_synonym: antigen presentation;   antigen processing
 alt_id: GO:0030333
 xref: Wikipedia:Antigen_presentation


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antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap3b1 adaptor related protein complex 3 subunit beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14557411) Ensembl
MGI
PMID:14557411 GO_REF:0000107 NCBI chrNW_004936549:5,964,240...6,205,245
Ensembl chrNW_004936549:5,965,143...6,204,379
JBrowse link
G Ap3d1 adaptor related protein complex 3 subunit delta 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:14557411) MGI
Ensembl
PMID:14557411 GO_REF:0000107 NCBI chrNW_004936588:1,223,646...1,262,577
Ensembl chrNW_004936588:1,222,466...1,262,676
JBrowse link
G Cd74 CD74 molecule acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:11754812), (PMID:3864916), (PMID:7985028)
(PMID:9432982)
MGI
TreeGrafter
Ensembl
InterPro
PMID:3864916 PMID:7985028 PMID:9432982 PMID:11754812 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936504:4,522,576...4,532,289
Ensembl chrNW_004936504:4,522,751...4,531,750
JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23733868) MGI
Ensembl
PMID:23733868 GO_REF:0000107 NCBI chrNW_004936470:28,303,213...28,566,470
Ensembl chrNW_004936470:28,303,828...28,566,118
JBrowse link
G Flt3 fms related receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (PMID:20457904) MGI PMID:20457904 NCBI chrNW_004936472:23,169,967...23,239,178
Ensembl chrNW_004936472:23,170,470...23,256,904
JBrowse link
G Gba1 glucosylceramidase beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22665763) Ensembl
MGI
PMID:22665763 GO_REF:0000107 NCBI chrNW_004936580:4,715,869...4,720,752
Ensembl chrNW_004936580:4,715,408...4,720,798
JBrowse link
G Ifng interferon gamma acts_upstream_of_or_within ISO (PMID:15356141) MGI PMID:15356141 NCBI chrNW_004936545:6,139,130...6,144,543
Ensembl chrNW_004936545:6,139,116...6,148,452
JBrowse link
G LOC101956844 HLA class I histocompatibility antigen, B alpha chain-like involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004937082:108,444...111,916 JBrowse link
G LOC101957991 HLA class II histocompatibility antigen, DQ alpha 2 chain-like involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004937082:171,973...177,850 JBrowse link
G LOC101958908 HLA class II histocompatibility antigen, DP alpha 1 chain involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936476:25,743,512...25,750,809
Ensembl chrNW_004936476:25,743,456...25,750,907
JBrowse link
G LOC101959667 HLA class II histocompatibility antigen, DM beta chain involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936476:25,846,653...25,852,006
Ensembl chrNW_004936476:25,846,630...25,851,409
JBrowse link
G LOC101961309 HLA class II histocompatibility antigen, DO beta chain involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936476:25,932,926...25,937,024
Ensembl chrNW_004936476:25,932,968...25,936,593
JBrowse link
G LOC101961596 patr class I histocompatibility antigen, A-108 alpha chain-like involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936476:25,957,980...25,961,418 JBrowse link
G LOC101963197 HLA class II histocompatibility antigen, DP beta 1 chain involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936476:25,730,800...25,741,089
Ensembl chrNW_004936476:25,730,596...25,741,145
JBrowse link
G LOC101963482 HLA class II histocompatibility antigen, DO alpha chain involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11069069) Ensembl
MGI
InterPro
PMID:11069069 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936476:25,786,322...25,790,881
Ensembl chrNW_004936476:25,787,492...25,790,950
JBrowse link
G LOC101963772 HLA class II histocompatibility antigen, DM alpha chain acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:11148202), (PMID:7584146), (PMID:7985028)
(PMID:9432982)
MGI
InterPro
PMID:7584146 PMID:7985028 PMID:9432982 PMID:11148202 GO_REF:0000002 NCBI chrNW_004936476:25,836,163...25,840,191
Ensembl chrNW_004936476:25,836,142...25,840,197
JBrowse link
G LOC101965888 patr class I histocompatibility antigen, A-2 alpha chain-like involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936723:140,555...144,886 JBrowse link
G LOC101966190 class I histocompatibility antigen, Gogo-B*0101 alpha chain-like involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936723:301,834...305,761 JBrowse link
G LOC101966484 HLA class I histocompatibility antigen, B alpha chain-like involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936723:501,297...505,374 JBrowse link
G LOC101966768 H-2 class I histocompatibility antigen, Q10 alpha chain-like involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936723:573,960...578,341 JBrowse link
G LOC101968188 HLA class II histocompatibility antigen, DR beta 3 chain-like involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936727:438,545...462,254 JBrowse link
G LOC101968486 HLA class II histocompatibility antigen, DQ alpha 1 chain involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936727:373,464...378,784 JBrowse link
G LOC101968779 HLA class II histocompatibility antigen, DQ beta 1 chain-like involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936727:361,446...368,507
Ensembl chrNW_004936727:361,398...368,532
JBrowse link
G LOC101969065 mamu class II histocompatibility antigen, DR alpha chain involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936727:540,225...544,968
Ensembl chrNW_004936727:540,217...545,036
JBrowse link
G LOC101970595 HLA class II histocompatibility antigen, DQ alpha 2 chain-like involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936727:314,177...319,557 JBrowse link
G LOC101970873 HLA class II histocompatibility antigen, DRB1 beta chain-like involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936727:524,266...532,107 JBrowse link
G LOC101977967 saoe class I histocompatibility antigen, A alpha chain-like involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936723:668,393...671,063 JBrowse link
G Psap prosaposin acts_upstream_of_or_within ISO (PMID:14684827) MGI PMID:14684827 NCBI chrNW_004936521:6,975,844...7,009,460
Ensembl chrNW_004936521:6,975,770...7,009,136
JBrowse link
G Psmb8 proteasome 20S subunit beta 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15356141) Ensembl
MGI
PMID:15356141 GO_REF:0000107 NCBI chrNW_004936476:25,908,533...25,911,914
Ensembl chrNW_004936476:25,908,490...25,911,925
JBrowse link
G Psmb9 proteasome 20S subunit beta 9 acts_upstream_of_or_within ISO (PMID:15356141) MGI PMID:15356141 NCBI chrNW_004936476:25,894,313...25,899,132
Ensembl chrNW_004936476:25,894,027...25,899,319
JBrowse link
G Rab10 RAB10, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:6,263,870...6,351,327
Ensembl chrNW_004936493:6,263,863...6,351,327
JBrowse link
G Rab27a RAB27A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:16,738,204...16,815,561
Ensembl chrNW_004936471:16,738,230...16,815,943
JBrowse link
G Rab32 RAB32, member RAS oncogene family involved_in ISO (PMID:19717423) UniProt PMID:19717423 NCBI chrNW_004936489:35,620...51,809 JBrowse link
G Rab33a RAB33A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936479:1,425,765...1,437,338
Ensembl chrNW_004936479:1,425,722...1,437,374
JBrowse link
G Rab34 RAB34, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:4,923,740...4,928,798
Ensembl chrNW_004936538:4,923,424...4,928,809
JBrowse link
G Rab35 RAB35, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936668:795,477...812,187
Ensembl chrNW_004936668:800,854...810,128
JBrowse link
G Rab3b RAB3B, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936522:8,924,724...8,985,309
Ensembl chrNW_004936522:8,924,617...8,989,734
JBrowse link
G Rab3c RAB3C, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936480:9,559,485...9,585,893
Ensembl chrNW_004936480:9,337,166...9,585,960
JBrowse link
G Rab4a RAB4A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936484:20,281,495...20,301,906
Ensembl chrNW_004936484:20,281,435...20,301,391
JBrowse link
G Rab5b RAB5B, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936646:386,958...408,265
Ensembl chrNW_004936646:386,833...410,192
JBrowse link
G Rab6a RAB6A, member RAS oncogene family involved_in ISO (PMID:19717423) UniProt PMID:19717423 NCBI chrNW_004936498:2,840,141...2,907,227
Ensembl chrNW_004936498:2,839,834...2,907,227
JBrowse link
G Rab8b RAB8B, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:23,768,460...23,832,072
Ensembl chrNW_004936471:23,768,415...23,834,129
JBrowse link
G Relb RELB proto-oncogene, NF-kB subunit involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:7845467) Ensembl
MGI
PMID:7845467 GO_REF:0000107 NCBI chrNW_004936706:1,569,603...1,596,831
Ensembl chrNW_004936706:1,569,756...1,596,456
JBrowse link
G Unc93b1 unc-93 homolog B1, TLR signaling regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20457904) Ensembl
MGI
PMID:20457904 GO_REF:0000107 NCBI chrNW_004936599:2,109,292...2,146,006
Ensembl chrNW_004936599:2,109,292...2,117,143
JBrowse link
G Wdfy4 WDFY family member 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:30409884) TreeGrafter
MGI
Ensembl
PMID:30409884 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936728:1,262,433...1,503,805
Ensembl chrNW_004936728:1,262,771...1,503,804
JBrowse link
antigen processing and presentation following phagocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl8b ARF like GTPase 8B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936577:4,430,939...4,475,186
Ensembl chrNW_004936577:4,430,898...4,475,212
JBrowse link
antigen processing and presentation of endogenous antigen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg5 autophagy related 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23382543) Ensembl
MGI
PMID:23382543 GO_REF:0000107 NCBI chrNW_004936564:2,759,085...2,885,394
Ensembl chrNW_004936564:2,758,598...2,885,420
JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2m beta-2-microglobulin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:7,646,504...7,655,656
Ensembl chrNW_004936471:7,646,373...7,655,778
JBrowse link
G Ide insulin degrading enzyme involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936601:2,230,477...2,318,562
Ensembl chrNW_004936601:2,230,283...2,318,752
JBrowse link
G Tap1 transporter 1, ATP binding cassette subfamily B member involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:25,899,514...25,907,690
Ensembl chrNW_004936476:25,899,339...25,907,695
JBrowse link
G Tap2 transporter 2, ATP binding cassette subfamily B member acts_upstream_of_or_within
involved_in
ISO
IEA
PMID:1758495 MGI
InterPro
Ensembl
PMID:1758495 GO_REF:0000002 GO_REF:0000107 RGD:1299069 NCBI chrNW_004936476:25,913,699...25,923,419
Ensembl chrNW_004936476:25,913,663...25,923,427
JBrowse link
G Tapbp TAP binding protein involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936476:25,554,186...25,566,634
Ensembl chrNW_004936476:25,554,403...25,564,330
JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-dependent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tap2 transporter 2, ATP binding cassette subfamily B member involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:1538753) Ensembl
MGI
PMID:1538753 GO_REF:0000107 NCBI chrNW_004936476:25,913,699...25,923,419
Ensembl chrNW_004936476:25,913,663...25,923,427
JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-independent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Azgp1 alpha-2-glycoprotein 1, zinc-binding involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936543:105,983...113,475
Ensembl chrNW_004936543:105,956...114,190
JBrowse link
G LOC101954959 saoe class I histocompatibility antigen, A alpha chain-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936727:2,038,458...2,044,597 JBrowse link
G LOC101956844 HLA class I histocompatibility antigen, B alpha chain-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004937082:108,444...111,916 JBrowse link
G LOC101959493 HLA class I histocompatibility antigen, alpha chain G-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936837:157,914...168,538 JBrowse link
G LOC101960640 H-2 class I histocompatibility antigen, Q7 alpha chain-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936837:197,982...206,664 JBrowse link
G LOC101961596 patr class I histocompatibility antigen, A-108 alpha chain-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936476:25,957,980...25,961,418 JBrowse link
G LOC101965888 patr class I histocompatibility antigen, A-2 alpha chain-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936723:140,555...144,886 JBrowse link
G LOC101966190 class I histocompatibility antigen, Gogo-B*0101 alpha chain-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936723:301,834...305,761 JBrowse link
G LOC101966484 HLA class I histocompatibility antigen, B alpha chain-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936723:501,297...505,374 JBrowse link
G LOC101966768 H-2 class I histocompatibility antigen, Q10 alpha chain-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936723:573,960...578,341 JBrowse link
G LOC101967338 class I histocompatibility antigen, Gogo-OKO alpha chain-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936723:754,228...757,304 JBrowse link
G LOC101967717 saoe class I histocompatibility antigen, A alpha chain-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936727:1,998,595...2,006,576 JBrowse link
G LOC101967997 patr class I histocompatibility antigen, A-126 alpha chain-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936727:2,011,408...2,015,441 JBrowse link
G LOC101975669 UL16-binding protein 1-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936489:2,926,371...2,927,238 JBrowse link
G LOC101977967 saoe class I histocompatibility antigen, A alpha chain-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936723:668,393...671,063 JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class Ib term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Azgp1 alpha-2-glycoprotein 1, zinc-binding involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936543:105,983...113,475
Ensembl chrNW_004936543:105,956...114,190
JBrowse link
G LOC101954959 saoe class I histocompatibility antigen, A alpha chain-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936727:2,038,458...2,044,597 JBrowse link
G LOC101956844 HLA class I histocompatibility antigen, B alpha chain-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004937082:108,444...111,916 JBrowse link
G LOC101959493 HLA class I histocompatibility antigen, alpha chain G-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936837:157,914...168,538 JBrowse link
G LOC101960640 H-2 class I histocompatibility antigen, Q7 alpha chain-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936837:197,982...206,664 JBrowse link
G LOC101961596 patr class I histocompatibility antigen, A-108 alpha chain-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936476:25,957,980...25,961,418 JBrowse link
G LOC101965888 patr class I histocompatibility antigen, A-2 alpha chain-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936723:140,555...144,886 JBrowse link
G LOC101966190 class I histocompatibility antigen, Gogo-B*0101 alpha chain-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936723:301,834...305,761 JBrowse link
G LOC101966484 HLA class I histocompatibility antigen, B alpha chain-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936723:501,297...505,374 JBrowse link
G LOC101966768 H-2 class I histocompatibility antigen, Q10 alpha chain-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936723:573,960...578,341 JBrowse link
G LOC101967338 class I histocompatibility antigen, Gogo-OKO alpha chain-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936723:754,228...757,304 JBrowse link
G LOC101967717 saoe class I histocompatibility antigen, A alpha chain-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936727:1,998,595...2,006,576 JBrowse link
G LOC101967997 patr class I histocompatibility antigen, A-126 alpha chain-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936727:2,011,408...2,015,441 JBrowse link
G LOC101975669 UL16-binding protein 1-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936489:2,926,371...2,927,238 JBrowse link
G LOC101977967 saoe class I histocompatibility antigen, A alpha chain-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936723:668,393...671,063 JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-dependent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tap2 transporter 2, ATP binding cassette subfamily B member involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:1538753) Ensembl
MGI
PMID:1538753 GO_REF:0000107 NCBI chrNW_004936476:25,913,699...25,923,419
Ensembl chrNW_004936476:25,913,663...25,923,427
JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101969065 mamu class II histocompatibility antigen, DR alpha chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936727:540,225...544,968
Ensembl chrNW_004936727:540,217...545,036
JBrowse link
antigen processing and presentation of exogenous antigen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fcgr1a Fc fragment of IgG receptor Ia involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11911823) Ensembl
MGI
PMID:11911823 GO_REF:0000107 NCBI chrNW_004936580:115,552...144,970
Ensembl chrNW_004936580:115,450...145,785
JBrowse link
G LOC101972633 major histocompatibility complex class I-related gene protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936481:8,325,918...8,347,941
Ensembl chrNW_004936481:8,327,690...8,347,960
JBrowse link
G Psme1 proteasome activator subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15944286) Ensembl
MGI
PMID:15944286 GO_REF:0000107 NCBI chrNW_004936722:405,491...408,277
Ensembl chrNW_004936722:403,112...408,473
JBrowse link
G Psme2 proteasome activator subunit 2 acts_upstream_of_or_within ISO (PMID:15944286) MGI PMID:15944286 NCBI chrNW_004936722:398,406...401,987
Ensembl chrNW_004936722:397,876...402,167
JBrowse link
antigen processing and presentation of exogenous peptide antigen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mpeg1 macrophage expressed 1 involved_in ISO (PMID:35471730) UniProt PMID:35471730 NCBI chrNW_004936581:3,428,515...3,436,877
Ensembl chrNW_004936581:3,421,256...3,431,706
JBrowse link
antigen processing and presentation of exogenous peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fcer1g Fc fragment of IgE receptor Ig involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11911824) TreeGrafter
MGI
PMID:11911824 GO_REF:0000118 NCBI chrNW_004936903:514,278...517,975
Ensembl chrNW_004936903:514,761...517,948
JBrowse link
G Fcgr1a Fc fragment of IgG receptor Ia acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:11911824) MGI
Ensembl
PMID:11911824 GO_REF:0000107 NCBI chrNW_004936580:115,552...144,970
Ensembl chrNW_004936580:115,450...145,785
JBrowse link
G Ifi30 IFI30 lysosomal thiol reductase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:3,003,366...3,007,003
Ensembl chrNW_004936596:3,002,809...3,007,383
JBrowse link
G LOC101965910 C-type lectin domain family 4 member A involved_in ISO (PMID:20530286) UniProt PMID:20530286 NCBI chrNW_004936892:454,036...467,957 JBrowse link
G Mfsd6 major facilitator superfamily domain containing 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:17010536) MGI
TreeGrafter
PMID:17010536 GO_REF:0000118 NCBI chrNW_004936506:7,673,640...7,720,214
Ensembl chrNW_004936506:7,670,630...7,717,157
JBrowse link
G Mpeg1 macrophage expressed 1 involved_in ISO (PMID:37347855) UniProt PMID:37347855 NCBI chrNW_004936581:3,428,515...3,436,877
Ensembl chrNW_004936581:3,421,256...3,431,706
JBrowse link
antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tapbp TAP binding protein acts_upstream_of_or_within
involved_in
ISO (PMID:9716645) MGI
UniProt
PMID:9716645 NCBI chrNW_004936476:25,554,186...25,566,634
Ensembl chrNW_004936476:25,554,403...25,564,330
JBrowse link
antigen processing and presentation of exogenous peptide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd74 CD74 molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:7679955), (PMID:8598040) Ensembl
MGI
PMID:7679955 PMID:8598040 GO_REF:0000107 NCBI chrNW_004936504:4,522,576...4,532,289
Ensembl chrNW_004936504:4,522,751...4,531,750
JBrowse link
G Ctse cathepsin E involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936557:6,485,783...6,498,805
Ensembl chrNW_004936557:6,485,755...6,498,833
JBrowse link
G Ctss cathepsin S involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:963,176...991,732
Ensembl chrNW_004936580:963,153...991,442
JBrowse link
G Fcer1g Fc fragment of IgE receptor Ig involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14643301) TreeGrafter
MGI
PMID:14643301 GO_REF:0000118 NCBI chrNW_004936903:514,278...517,975
Ensembl chrNW_004936903:514,761...517,948
JBrowse link
G Fcgr2b Fc fragment of IgG receptor IIb acts_upstream_of_or_within ISO (PMID:14643301) MGI PMID:14643301 NCBI chrNW_004937131:80,014...96,114 JBrowse link
G Ifi30 IFI30 lysosomal thiol reductase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11701933) Ensembl
MGI
PMID:11701933 GO_REF:0000107 NCBI chrNW_004936596:3,003,366...3,007,003
Ensembl chrNW_004936596:3,002,809...3,007,383
JBrowse link
G Lgmn legumain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936733:772,764...792,792
Ensembl chrNW_004936733:772,708...792,995
JBrowse link
G LOC101958908 HLA class II histocompatibility antigen, DP alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:25,743,512...25,750,809
Ensembl chrNW_004936476:25,743,456...25,750,907
JBrowse link
G LOC101959667 HLA class II histocompatibility antigen, DM beta chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:25,846,653...25,852,006
Ensembl chrNW_004936476:25,846,630...25,851,409
JBrowse link
G LOC101963197 HLA class II histocompatibility antigen, DP beta 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:25,730,800...25,741,089
Ensembl chrNW_004936476:25,730,596...25,741,145
JBrowse link
G LOC101963482 HLA class II histocompatibility antigen, DO alpha chain acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:9492004) MGI
Ensembl
PMID:9492004 GO_REF:0000107 NCBI chrNW_004936476:25,786,322...25,790,881
Ensembl chrNW_004936476:25,787,492...25,790,950
JBrowse link
G LOC101963772 HLA class II histocompatibility antigen, DM alpha chain acts_upstream_of_or_within ISO (PMID:8598040)
(PMID:8598041)
(PMID:11714799)
(PMID:11027433)
MGI PMID:8598040 PMID:8598041 PMID:11027433 PMID:11714799 NCBI chrNW_004936476:25,836,163...25,840,191
Ensembl chrNW_004936476:25,836,142...25,840,197
JBrowse link
G LOC101968486 HLA class II histocompatibility antigen, DQ alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936727:373,464...378,784 JBrowse link
G LOC101968779 HLA class II histocompatibility antigen, DQ beta 1 chain-like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936727:361,446...368,507
Ensembl chrNW_004936727:361,398...368,532
JBrowse link
G LOC101969065 mamu class II histocompatibility antigen, DR alpha chain involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11027433), (PMID:11714799) Ensembl
MGI
PMID:11027433 PMID:11714799 GO_REF:0000107 NCBI chrNW_004936727:540,225...544,968
Ensembl chrNW_004936727:540,217...545,036
JBrowse link
G Pikfyve phosphoinositide kinase, FYVE-type zinc finger containing involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936950:242,071...323,204
Ensembl chrNW_004936950:242,522...320,078
JBrowse link
G Traf6 TNF receptor associated factor 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14499111) Ensembl
MGI
PMID:14499111 GO_REF:0000107 NCBI chrNW_004936533:1,857,685...1,874,973
Ensembl chrNW_004936533:1,857,666...1,876,120
JBrowse link
G Unc93b1 unc-93 homolog B1, TLR signaling regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16415873) Ensembl
MGI
PMID:16415873 GO_REF:0000107 NCBI chrNW_004936599:2,109,292...2,146,006
Ensembl chrNW_004936599:2,109,292...2,117,143
JBrowse link
antigen processing and presentation of exogenous protein antigen via MHC class Ib, TAP-dependent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2m beta-2-microglobulin acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:16299293) MGI
Ensembl
PMID:16299293 GO_REF:0000107 NCBI chrNW_004936471:7,646,504...7,655,656
Ensembl chrNW_004936471:7,646,373...7,655,778
JBrowse link
G Tap2 transporter 2, ATP binding cassette subfamily B member involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16299293) Ensembl
MGI
PMID:16299293 GO_REF:0000107 NCBI chrNW_004936476:25,913,699...25,923,419
Ensembl chrNW_004936476:25,913,663...25,923,427
JBrowse link
antigen processing and presentation of peptide antigen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctsl cathepsin L involved_in ISO (PMID:12021314), (PMID:9545226) UniProt PMID:9545226 PMID:12021314 NCBI chrNW_004936680:3,047,355...3,050,640 JBrowse link
G Ctss cathepsin S involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:963,176...991,732
Ensembl chrNW_004936580:963,153...991,442
JBrowse link
G LOC101968486 HLA class II histocompatibility antigen, DQ alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936727:373,464...378,784 JBrowse link
G LOC101968779 HLA class II histocompatibility antigen, DQ beta 1 chain-like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936727:361,446...368,507
Ensembl chrNW_004936727:361,398...368,532
JBrowse link
G Slc11a1 solute carrier family 11 member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17620357) Ensembl
MGI
PMID:17620357 GO_REF:0000107 NCBI chrNW_004936569:888,309...895,991
Ensembl chrNW_004936569:887,742...895,977
JBrowse link
antigen processing and presentation of peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb9 ATP binding cassette subfamily B member 9 NOT|involved_in ISO (PMID:17977821) UniProt PMID:17977821 NCBI chrNW_004936558:1,689,832...1,718,306
Ensembl chrNW_004936558:1,689,388...1,718,869
JBrowse link
G B2m beta-2-microglobulin involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936471:7,646,504...7,655,656
Ensembl chrNW_004936471:7,646,373...7,655,778
JBrowse link
G LOC101954959 saoe class I histocompatibility antigen, A alpha chain-like involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936727:2,038,458...2,044,597 JBrowse link
G LOC101956844 HLA class I histocompatibility antigen, B alpha chain-like involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004937082:108,444...111,916 JBrowse link
G LOC101959493 HLA class I histocompatibility antigen, alpha chain G-like involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936837:157,914...168,538 JBrowse link
G LOC101961596 patr class I histocompatibility antigen, A-108 alpha chain-like involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936476:25,957,980...25,961,418 JBrowse link
G LOC101965888 patr class I histocompatibility antigen, A-2 alpha chain-like involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936723:140,555...144,886 JBrowse link
G LOC101966190 class I histocompatibility antigen, Gogo-B*0101 alpha chain-like involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936723:301,834...305,761 JBrowse link
G LOC101966484 HLA class I histocompatibility antigen, B alpha chain-like involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936723:501,297...505,374 JBrowse link
G LOC101966768 H-2 class I histocompatibility antigen, Q10 alpha chain-like involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936723:573,960...578,341 JBrowse link
G LOC101967338 class I histocompatibility antigen, Gogo-OKO alpha chain-like involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936723:754,228...757,304 JBrowse link
G LOC101967717 saoe class I histocompatibility antigen, A alpha chain-like involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936727:1,998,595...2,006,576 JBrowse link
G LOC101967997 patr class I histocompatibility antigen, A-126 alpha chain-like involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936727:2,011,408...2,015,441 JBrowse link
G LOC101972633 major histocompatibility complex class I-related gene protein involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936481:8,325,918...8,347,941
Ensembl chrNW_004936481:8,327,690...8,347,960
JBrowse link
G LOC101977967 saoe class I histocompatibility antigen, A alpha chain-like involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936723:668,393...671,063 JBrowse link
antigen processing and presentation of peptide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Marchf1 membrane associated ring-CH-type finger 1 involved_in ISO (PMID:18389477)
(PMID:17255932), (PMID:19917682)
UniProt PMID:17255932 PMID:18389477 PMID:19917682 NCBI chrNW_004936555:1,810,896...2,097,870
Ensembl chrNW_004936555:1,610,268...2,097,985
JBrowse link
G Marchf8 membrane associated ring-CH-type finger 8 involved_in ISO (PMID:16785530) UniProt PMID:16785530 NCBI chrNW_004936728:27,658...32,174 JBrowse link
antigen processing and presentation of peptide or polysaccharide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101958908 HLA class II histocompatibility antigen, DP alpha 1 chain involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936476:25,743,512...25,750,809
Ensembl chrNW_004936476:25,743,456...25,750,907
JBrowse link
G LOC101959667 HLA class II histocompatibility antigen, DM beta chain involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936476:25,846,653...25,852,006
Ensembl chrNW_004936476:25,846,630...25,851,409
JBrowse link
G LOC101961309 HLA class II histocompatibility antigen, DO beta chain involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936476:25,932,926...25,937,024
Ensembl chrNW_004936476:25,932,968...25,936,593
JBrowse link
G LOC101963197 HLA class II histocompatibility antigen, DP beta 1 chain involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936476:25,730,800...25,741,089
Ensembl chrNW_004936476:25,730,596...25,741,145
JBrowse link
G LOC101963482 HLA class II histocompatibility antigen, DO alpha chain involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936476:25,786,322...25,790,881
Ensembl chrNW_004936476:25,787,492...25,790,950
JBrowse link
G LOC101963772 HLA class II histocompatibility antigen, DM alpha chain involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936476:25,836,163...25,840,191
Ensembl chrNW_004936476:25,836,142...25,840,197
JBrowse link
G LOC101968188 HLA class II histocompatibility antigen, DR beta 3 chain-like involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936727:438,545...462,254 JBrowse link
G LOC101968486 HLA class II histocompatibility antigen, DQ alpha 1 chain involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936727:373,464...378,784 JBrowse link
G LOC101968779 HLA class II histocompatibility antigen, DQ beta 1 chain-like involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936727:361,446...368,507
Ensembl chrNW_004936727:361,398...368,532
JBrowse link
G LOC101969065 mamu class II histocompatibility antigen, DR alpha chain involved_in IEA Ensembl
UniProt
GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936727:540,225...544,968
Ensembl chrNW_004936727:540,217...545,036
JBrowse link
G LOC101970873 HLA class II histocompatibility antigen, DRB1 beta chain-like involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936727:524,266...532,107 JBrowse link
antigen processing and presentation of polysaccharide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl8b ARF like GTPase 8B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936577:4,430,939...4,475,186
Ensembl chrNW_004936577:4,430,898...4,475,212
JBrowse link
antigen processing and presentation, exogenous lipid antigen via MHC class Ib term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap3b1 adaptor related protein complex 3 subunit beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14557411) Ensembl
MGI
PMID:14557411 GO_REF:0000107 NCBI chrNW_004936549:5,964,240...6,205,245
Ensembl chrNW_004936549:5,965,143...6,204,379
JBrowse link
G Ap3d1 adaptor related protein complex 3 subunit delta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14557411) Ensembl
MGI
PMID:14557411 GO_REF:0000107 NCBI chrNW_004936588:1,223,646...1,262,577
Ensembl chrNW_004936588:1,222,466...1,262,676
JBrowse link
B cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fcer2 Fc fragment of IgE receptor II involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:4,717,010...4,724,664
Ensembl chrNW_004936588:4,719,447...4,724,664
JBrowse link
dendritic cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101955076 low affinity immunoglobulin gamma Fc region receptor III-A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004937131:42,523...49,533 JBrowse link
G Mpeg1 macrophage expressed 1 involved_in ISO (PMID:37347855) UniProt PMID:37347855 NCBI chrNW_004936581:3,428,515...3,436,877
Ensembl chrNW_004936581:3,421,256...3,431,706
JBrowse link
G Washc1 WASH complex subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936606:209,289...228,986 JBrowse link
myeloid dendritic cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101969065 mamu class II histocompatibility antigen, DR alpha chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936727:540,225...544,968
Ensembl chrNW_004936727:540,217...545,036
JBrowse link
negative regulation of antigen processing and presentation of endogenous peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hfe homeostatic iron regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936671:1,940,079...1,947,574
Ensembl chrNW_004936671:1,940,101...1,947,580
JBrowse link
negative regulation of antigen processing and presentation of peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tapbpl TAP binding protein like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936709:1,304,843...1,313,191
Ensembl chrNW_004936709:1,304,971...1,313,770
JBrowse link
negative regulation of antigen processing and presentation of peptide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101961309 HLA class II histocompatibility antigen, DO beta chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:25,932,926...25,937,024
Ensembl chrNW_004936476:25,932,968...25,936,593
JBrowse link
G LOC101963482 HLA class II histocompatibility antigen, DO alpha chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:25,786,322...25,790,881
Ensembl chrNW_004936476:25,787,492...25,790,950
JBrowse link
negative regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Thbs1 thrombospondin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:3,064,466...3,081,125
Ensembl chrNW_004936471:3,064,422...3,081,949
JBrowse link
negative regulation of dendritic cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd68 CD68 molecule involved_in ISO (PMID:21572087) ARUK-UCL PMID:21572087 NCBI chrNW_004936595:858,289...861,131 JBrowse link
G Fgl2 fibrinogen like 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:29341118) Ensembl
MGI
PMID:29341118 GO_REF:0000107 NCBI chrNW_004936479:20,619,955...20,625,416
Ensembl chrNW_004936479:20,619,931...20,652,981
JBrowse link
G Thbs1 thrombospondin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:3,064,466...3,081,125
Ensembl chrNW_004936471:3,064,422...3,081,949
JBrowse link
negative regulation of macrophage antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgl2 fibrinogen like 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:29341118) MGI
Ensembl
PMID:29341118 GO_REF:0000107 NCBI chrNW_004936479:20,619,955...20,625,416
Ensembl chrNW_004936479:20,619,931...20,652,981
JBrowse link
peptide antigen assembly with MHC class I protein complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2m beta-2-microglobulin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:7,646,504...7,655,656
Ensembl chrNW_004936471:7,646,373...7,655,778
JBrowse link
G Calr calreticulin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936659:1,994,695...1,999,070
Ensembl chrNW_004936659:1,994,648...1,999,430
JBrowse link
G Pdia3 protein disulfide isomerase family A member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:6,809,181...6,834,189
Ensembl chrNW_004936471:6,809,195...6,836,169
JBrowse link
G Tapbp TAP binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:25,554,186...25,566,634
Ensembl chrNW_004936476:25,554,403...25,564,330
JBrowse link
G Tapbpl TAP binding protein like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936709:1,304,843...1,313,191
Ensembl chrNW_004936709:1,304,971...1,313,770
JBrowse link
peptide antigen assembly with MHC class II protein complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101959667 HLA class II histocompatibility antigen, DM beta chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:25,846,653...25,852,006
Ensembl chrNW_004936476:25,846,630...25,851,409
JBrowse link
G LOC101963772 HLA class II histocompatibility antigen, DM alpha chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:25,836,163...25,840,191
Ensembl chrNW_004936476:25,836,142...25,840,197
JBrowse link
G LOC101969065 mamu class II histocompatibility antigen, DR alpha chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936727:540,225...544,968
Ensembl chrNW_004936727:540,217...545,036
JBrowse link
peptide antigen stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tapbp TAP binding protein involved_in ISO (PMID:12594855) UniProt PMID:12594855 NCBI chrNW_004936476:25,554,186...25,566,634
Ensembl chrNW_004936476:25,554,403...25,564,330
JBrowse link
peptide antigen transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tap2 transporter 2, ATP binding cassette subfamily B member involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:25,913,699...25,923,419
Ensembl chrNW_004936476:25,913,663...25,923,427
JBrowse link
plasmacytoid dendritic cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101965910 C-type lectin domain family 4 member A involved_in ISO (PMID:18258799), (PMID:20530286) UniProt PMID:18258799 PMID:20530286 NCBI chrNW_004936892:454,036...467,957 JBrowse link
positive regulation of antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101968779 HLA class II histocompatibility antigen, DQ beta 1 chain-like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936727:361,446...368,507
Ensembl chrNW_004936727:361,398...368,532
JBrowse link
positive regulation of antigen processing and presentation of peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tap2 transporter 2, ATP binding cassette subfamily B member ISO RGD PMID:1758495 RGD:1299069 NCBI chrNW_004936476:25,913,699...25,923,419
Ensembl chrNW_004936476:25,913,663...25,923,427
JBrowse link
positive regulation of antigen processing and presentation of peptide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pycard PYD and CARD domain containing involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:13,550,702...13,552,774
Ensembl chrNW_004936501:13,550,679...13,552,805
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:18,659,725...18,665,406
Ensembl chrNW_004936476:18,659,815...18,663,940
JBrowse link
positive regulation of dendritic cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl19 C-C motif chemokine ligand 19 involved_in ISO (PMID:15845453) BHF-UCL PMID:15845453 NCBI chrNW_004936524:2,765,271...2,767,259
Ensembl chrNW_004936524:2,765,267...2,767,385
JBrowse link
G Ccl21 C-C motif chemokine ligand 21 involved_in ISO (PMID:15845453) BHF-UCL PMID:15845453 NCBI chrNW_004936524:2,787,963...2,789,116
Ensembl chrNW_004936524:2,788,341...2,789,016
JBrowse link
G Ccr7 C-C motif chemokine receptor 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:15,575,764...15,579,766
Ensembl chrNW_004936490:15,575,764...15,579,757
JBrowse link
G Cd74 CD74 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936504:4,522,576...4,532,289
Ensembl chrNW_004936504:4,522,751...4,531,750
JBrowse link
G Nod1 nucleotide binding oligomerization domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:6,717,354...6,768,293
Ensembl chrNW_004936478:6,715,245...6,768,372
JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:3,708,069...3,742,845
Ensembl chrNW_004936475:3,713,362...3,745,982
JBrowse link
G Slc11a1 solute carrier family 11 member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18984740) Ensembl
MGI
PMID:18984740 GO_REF:0000107 NCBI chrNW_004936569:888,309...895,991
Ensembl chrNW_004936569:887,742...895,977
JBrowse link
positive regulation of macrophage antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fam3d FAM3 metabolism regulating signaling molecule D acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:29853563) MGI
Ensembl
PMID:29853563 GO_REF:0000107 NCBI chrNW_004936473:2,402,713...2,432,589
Ensembl chrNW_004936473:2,402,652...2,433,002
JBrowse link
regulation of antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cst7 cystatin F acts_upstream_of ISO (PMID:22365146) ARUK-UCL PMID:22365146 NCBI chrNW_004936620:853,533...870,609
Ensembl chrNW_004936620:853,439...870,812
JBrowse link
G Ctss cathepsin S involved_in ISO (PMID:22365146) ARUK-UCL PMID:22365146 NCBI chrNW_004936580:963,176...991,732
Ensembl chrNW_004936580:963,153...991,442
JBrowse link
G Ptpn22 protein tyrosine phosphatase non-receptor type 22 NOT|involved_in ISO (PMID:23871208) UniProt PMID:23871208 NCBI chrNW_004936690:2,180,804...2,232,869
Ensembl chrNW_004936690:2,181,047...2,232,958
JBrowse link
G Ythdf1 YTH N6-methyladenosine RNA binding protein F1 involved_in ISO (PMID:30728504) UniProt PMID:30728504 NCBI chrNW_004936514:10,587,877...10,603,373
Ensembl chrNW_004936514:10,587,222...10,603,478
JBrowse link
regulation of T cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Was WASP actin nucleation promoting factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936721:634,685...641,248
Ensembl chrNW_004936721:634,706...641,082
JBrowse link
T cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Icam1 intercellular adhesion molecule 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:2479693) MGI
Ensembl
PMID:2479693 GO_REF:0000107 NCBI chrNW_004936659:616,570...627,172
Ensembl chrNW_004936659:616,752...627,174
JBrowse link
G Rftn1 raftlin, lipid raft linker 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:9,119,234...9,317,696
Ensembl chrNW_004936473:9,117,247...9,317,704
JBrowse link
G Treml4 triggering receptor expressed on myeloid cells like 4 acts_upstream_of_or_within ISO (PMID:22210914) MGI PMID:22210914 NCBI chrNW_004936476:18,603,620...18,612,050 JBrowse link
G Trex1 three prime repair exonuclease 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24218451) Ensembl
MGI
PMID:24218451 GO_REF:0000107 NCBI chrNW_004936529:264,535...266,451
Ensembl chrNW_004936529:264,468...266,422
JBrowse link
G Unc93b1 unc-93 homolog B1, TLR signaling regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16415873) Ensembl
MGI
PMID:16415873 GO_REF:0000107 NCBI chrNW_004936599:2,109,292...2,146,006
Ensembl chrNW_004936599:2,109,292...2,117,143
JBrowse link

Term paths to the root