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ONTOLOGY REPORT - ANNOTATIONS


Term:antigen processing and presentation
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Accession:GO:0019882 term browser browse the term
Definition:The process in which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex.
Synonyms:exact_synonym: antigen presentation;   antigen processing
 alt_id: GO:0030333
 xref: Wikipedia:Antigen_presentation



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antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AP3B1 adaptor related protein complex 3 subunit beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14557411) Ensembl
MGI
PMID:14557411 GO_REF:0000107 NCBI chr 2:86,875,922...87,142,722
Ensembl chr 2:86,873,290...87,142,768
JBrowse link
G AP3D1 adaptor related protein complex 3 subunit delta 1 acts_upstream_of_or_within ISO (PMID:14557411) MGI PMID:14557411 NCBI chr 2:76,428,443...76,471,266
Ensembl chr 2:76,428,476...76,471,257
JBrowse link
G CD74 CD74 molecule involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
(PMID:9432982)
(PMID:11754812), (PMID:3864916), (PMID:7985028)
InterPro
GO_Central
MGI
Ensembl
PMID:3864916 PMID:7985028 PMID:9432982 PMID:11754812 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:151,402,210...151,409,924
Ensembl chr 2:151,402,211...151,409,833
JBrowse link
G EXT1 exostosin glycosyltransferase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23733868) Ensembl
MGI
PMID:23733868 GO_REF:0000107 NCBI chr 4:20,645,002...20,935,769
Ensembl chr 4:20,645,610...20,935,540
JBrowse link
G FLT3 fms related receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (PMID:20457904) MGI PMID:20457904 NCBI chr11:5,370,475...5,455,439
Ensembl chr11:5,370,496...5,455,358
JBrowse link
G GBA1 glucosylceramidase beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22665763) Ensembl
MGI
PMID:22665763 GO_REF:0000107 NCBI chr 4:94,583,905...94,606,689
Ensembl chr 4:94,584,134...94,609,745
JBrowse link
G IFNG interferon gamma acts_upstream_of_or_within ISO (PMID:15356141) MGI PMID:15356141 NCBI chr 5:32,477,906...32,482,670
Ensembl chr 5:32,477,906...32,482,670
JBrowse link
G LOC100153139 HLA class II histocompatibility antigen, DRB1-4 beta chain-like involved_in IEA InterPro GO_REF:0000002 NCBI chr 7:24,882,212...24,894,226 JBrowse link
G LOC100513601 patr class I histocompatibility antigen, A-126 alpha chain-like involved_in IEA InterPro GO_REF:0000002 NCBI chr 7:22,888,616...22,920,154 JBrowse link
G LOC100622689 patr class I histocompatibility antigen, A-126 alpha chain-like involved_in IEA InterPro GO_REF:0000002
G LOC106504372 DLA class II histocompatibility antigen, DR-1 beta chain-like involved_in IEA InterPro GO_REF:0000002 NCBI chr 7:25,000,257...25,000,539 JBrowse link
G PCD1B CD1B antigen acts_upstream_of_or_within ISO (PMID:11754812) MGI PMID:11754812 NCBI chr 4:92,035,122...92,040,724
Ensembl chr 4:92,031,712...92,040,742
JBrowse link
G PSAP prosaposin acts_upstream_of_or_within ISO (PMID:14684827) MGI PMID:14684827 NCBI chr14:74,734,185...74,820,645
Ensembl chr14:74,734,189...74,887,763
JBrowse link
G PSMB8 proteasome 20S subunit beta 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15356141) Ensembl
MGI
PMID:15356141 GO_REF:0000107 NCBI chr 7:25,058,456...25,061,666
Ensembl chr 7:25,058,461...25,062,245
JBrowse link
G PSMB9 proteasome 20S subunit beta 9 acts_upstream_of_or_within ISO (PMID:15356141) MGI PMID:15356141 NCBI chr 7:25,072,133...25,077,508
Ensembl chr 7:25,072,323...25,078,322
JBrowse link
G RAB10 RAB10, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:112,842,190...112,924,188
Ensembl chr 3:112,829,137...112,924,269
JBrowse link
G RAB27A RAB27A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:116,532,816...116,606,477
Ensembl chr 1:116,532,974...116,606,474
JBrowse link
G RAB32 RAB32, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:19,076,301...19,097,647
Ensembl chr 1:19,075,271...19,097,870
JBrowse link
G RAB33A RAB33A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:106,708,402...106,723,803
Ensembl chr  X:106,712,398...106,723,404
JBrowse link
G RAB34 RAB34, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:44,951,989...44,956,458
Ensembl chr12:44,951,210...44,956,119
JBrowse link
G RAB35 RAB35, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:40,124,318...40,141,261
Ensembl chr14:40,124,326...40,141,668
JBrowse link
G RAB3B RAB3B, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:160,194,488...160,255,635
Ensembl chr 6:160,194,555...160,255,632
JBrowse link
G RAB3C RAB3C, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:37,411,931...37,729,583
Ensembl chr16:37,412,909...37,728,502
JBrowse link
G RAB4A RAB4A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:60,481,484...60,528,549
Ensembl chr14:60,481,488...60,529,095
JBrowse link
G RAB5B RAB5B, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:21,373,333...21,392,729
Ensembl chr 5:21,387,250...21,389,745
JBrowse link
G RAB6A RAB6A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:8,137,901...8,199,212
Ensembl chr 9:8,137,672...8,199,079
JBrowse link
G RAB8B RAB8B, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:108,772,851...108,840,222
Ensembl chr 1:108,772,851...108,840,227
JBrowse link
G RELB RELB proto-oncogene, NF-kB subunit involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:7845467) Ensembl
MGI
PMID:7845467 GO_REF:0000107 NCBI chr 6:51,444,670...51,480,350
Ensembl chr 6:51,444,664...51,480,319
JBrowse link
G SLA Src like adaptor involved_in IEA InterPro GO_REF:0000002 NCBI chr 4:8,166,829...8,247,396
Ensembl chr 4:8,189,232...8,247,388
JBrowse link
G SLA-1 MHC class I antigen 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 7:22,824,137...22,920,154 JBrowse link
G SLA-11 MHC class I antigen 11 involved_in IEA InterPro GO_REF:0000002 NCBI chr 7:23,005,436...23,010,790 JBrowse link
G SLA-2 MHC class I antigen 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 7:22,916,747...22,959,405 JBrowse link
G SLA-3 MHC class I antigen 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr 7:22,938,211...22,942,735 JBrowse link
G SLA-5 MHC class I antigen 5 involved_in IEA InterPro GO_REF:0000002 NCBI chr 7:22,851,888...22,854,782
Ensembl chr 7:22,851,888...22,854,942
JBrowse link
G SLA-8 MHC class I antigen 8 involved_in IEA InterPro GO_REF:0000002 NCBI chr 7:23,622,352...23,625,818 JBrowse link
G SLA-DMA SLA-DM alpha chain involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11148202), (PMID:7584146), (PMID:7985028)
(PMID:9432982)
InterPro
MGI
PMID:7584146 PMID:7985028 PMID:9432982 PMID:11148202 GO_REF:0000002 NCBI chr 7:25,133,494...25,137,928
Ensembl chr 7:25,133,497...25,137,966
JBrowse link
G SLA-DMB MHC class II, DM beta involved_in IEA InterPro GO_REF:0000002 NCBI chr 7:25,119,278...25,125,089
Ensembl chr 7:25,119,282...25,128,236
JBrowse link
G SLA-DOA major histocompatibility complex, class II, DO alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11069069) InterPro
MGI
Ensembl
PMID:11069069 GO_REF:0000002 GO_REF:0000107 NCBI chr 7:25,178,866...25,182,665
Ensembl chr 7:25,178,881...25,182,707
JBrowse link
G SLA-DOB MHC class II, DO beta involved_in IEA InterPro GO_REF:0000002 NCBI chr 7:25,030,435...25,038,196
Ensembl chr 7:25,030,438...25,037,962
JBrowse link
G SLA-DQA1 MHC class II histocompatibility antigen SLA-DQA involved_in IEA InterPro GO_REF:0000002 NCBI chr 7:24,953,472...24,959,313 JBrowse link
G SLA-DQB1 SLA-DQ beta1 domain involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr 7:24,969,034...24,977,238
Ensembl chr 7:24,967,113...24,977,240
JBrowse link
G SLA-DRA MHC class II DR-alpha involved_in IEA InterPro GO_REF:0000002 NCBI chr 7:24,825,037...24,830,650
Ensembl chr 7:24,825,052...24,835,158
JBrowse link
G SLA-DRB1 MHC class II histocompatibility antigen SLA-DRB1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 7:24,901,386...24,914,016
Ensembl chr 7:24,881,775...24,914,053
JBrowse link
G SLA2 Src like adaptor 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr17:39,875,625...39,904,838
Ensembl chr17:39,875,628...39,902,940
JBrowse link
G UNC93B1 unc-93 homolog B1, TLR signaling regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20457904) Ensembl
MGI
PMID:20457904 GO_REF:0000107 NCBI chr 2:4,898,414...4,909,833
Ensembl chr 2:4,898,409...4,909,856
JBrowse link
G WDFY4 WDFY family member 4 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
(PMID:30409884) Ensembl
MGI
GO_Central
PMID:30409884 GO_REF:0000033 GO_REF:0000107 NCBI chr14:89,353,362...89,632,722
Ensembl chr14:89,353,443...89,632,695
JBrowse link
antigen processing and presentation following phagocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARL8B ADP ribosylation factor like GTPase 8B involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:61,640,619...61,696,819
Ensembl chr13:61,640,671...61,698,374
JBrowse link
antigen processing and presentation of endogenous antigen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG5 autophagy related 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23382543) Ensembl
MGI
PMID:23382543 GO_REF:0000107 NCBI chr 1:72,343,950...72,520,402
Ensembl chr 1:72,270,799...72,520,396
JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2M beta-2-microglobulin involved_in ISO (PMID:24643698) BHF-UCL PMID:24643698 NCBI chr 1:126,837,721...126,844,043
Ensembl chr 1:126,835,143...126,981,582
JBrowse link
G IDE insulin degrading enzyme involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:103,992,035...104,106,571
Ensembl chr14:103,992,039...104,106,576
JBrowse link
G TAP1 transporter 1, ATP binding cassette subfamily B member involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:25,062,772...25,071,989
Ensembl chr 7:25,062,768...25,074,843
JBrowse link
G TAP2 transporter 2, ATP binding cassette subfamily B member acts_upstream_of_or_within
involved_in
ISO
IEA
PMID:1758495 MGI
InterPro
PMID:1758495 GO_REF:0000002 RGD:1299069 NCBI chr 7:25,045,085...25,056,915
Ensembl chr 7:25,043,840...25,056,922
JBrowse link
G TAPBP TAP binding protein involved_in IEA InterPro GO_REF:0000002 NCBI chr 7:29,663,491...29,673,453
Ensembl chr 7:29,663,495...29,673,634
JBrowse link
G ZBTB22 zinc finger and BTB domain containing 22 involved_in IEA InterPro GO_REF:0000002 NCBI chr 7:29,673,006...29,676,614
Ensembl chr 7:29,673,027...29,675,593
JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-dependent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TAP2 transporter 2, ATP binding cassette subfamily B member acts_upstream_of_or_within ISO (PMID:1538753) MGI PMID:1538753 NCBI chr 7:25,045,085...25,056,915
Ensembl chr 7:25,043,840...25,056,922
JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-independent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AZGP1 alpha-2-glycoprotein 1, zinc-binding involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:7,867,521...7,874,857 JBrowse link
G LOC100513601 patr class I histocompatibility antigen, A-126 alpha chain-like involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:22,888,616...22,920,154 JBrowse link
G LOC100521998 NKG2D ligand 4-like involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:16,057,036...16,059,787 JBrowse link
G LOC106508817 NKG2D ligand 4-like involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:16,090,757...16,100,784 JBrowse link
G SLA-2 MHC class I antigen 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:22,916,747...22,959,405 JBrowse link
G SLA-3 MHC class I antigen 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:22,938,211...22,942,735 JBrowse link
G SLA-6 MHC class I antigen 6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:23,645,335...23,649,342 JBrowse link
G SLA-7 MHC class I antigen 7 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:23,634,731...23,638,722 JBrowse link
G SLA-8 MHC class I antigen 8 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:23,622,352...23,625,818 JBrowse link
G ULBP1 UL16 binding protein 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:16,113,774...16,119,273
Ensembl chr 1:16,113,780...16,119,273
JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class Ib term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AZGP1 alpha-2-glycoprotein 1, zinc-binding involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:7,867,521...7,874,857 JBrowse link
G LOC100513601 patr class I histocompatibility antigen, A-126 alpha chain-like involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:22,888,616...22,920,154 JBrowse link
G LOC100521998 NKG2D ligand 4-like involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:16,057,036...16,059,787 JBrowse link
G LOC106508817 NKG2D ligand 4-like involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:16,090,757...16,100,784 JBrowse link
G SLA-2 MHC class I antigen 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:22,916,747...22,959,405 JBrowse link
G SLA-3 MHC class I antigen 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:22,938,211...22,942,735 JBrowse link
G SLA-6 MHC class I antigen 6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:23,645,335...23,649,342 JBrowse link
G SLA-7 MHC class I antigen 7 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:23,634,731...23,638,722 JBrowse link
G SLA-8 MHC class I antigen 8 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:8464890) GO_Central
MGI
PMID:8464890 GO_REF:0000033 NCBI chr 7:23,622,352...23,625,818 JBrowse link
G ULBP1 UL16 binding protein 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:16,113,774...16,119,273
Ensembl chr 1:16,113,780...16,119,273
JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-dependent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TAP2 transporter 2, ATP binding cassette subfamily B member acts_upstream_of_or_within
involved_in
ISO (PMID:1538753)
(PMID:1538751)
MGI
UniProt
PMID:1538751 PMID:1538753 NCBI chr 7:25,045,085...25,056,915
Ensembl chr 7:25,043,840...25,056,922
JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLA-DRA MHC class II DR-alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:24,825,037...24,830,650
Ensembl chr 7:24,825,052...24,835,158
JBrowse link
antigen processing and presentation of exogenous antigen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FCGR1A Fc fragment of IgG, high affinity Ia, receptor (CD64) acts_upstream_of_or_within ISO (PMID:11911823) MGI PMID:11911823 NCBI chr 4:99,233,632...99,242,531
Ensembl chr 4:99,233,611...99,242,586
JBrowse link
G MR1 major histocompatibility complex, class I-related involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:122,592,510...122,611,462
Ensembl chr 9:122,592,532...122,609,022
JBrowse link
G PSME1 proteasome activator subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15944286) Ensembl
MGI
PMID:15944286 GO_REF:0000107 NCBI chr 7:75,161,830...75,164,531
Ensembl chr 7:75,160,766...75,164,810
JBrowse link
G PSME2 proteasome activator subunit 2 acts_upstream_of_or_within ISO (PMID:15944286) MGI PMID:15944286 NCBI chr 7:75,154,570...75,157,871
Ensembl chr 7:75,153,965...75,157,870
JBrowse link
antigen processing and presentation of exogenous peptide antigen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC110259471 macrophage-expressed gene 1 protein-like involved_in ISO (PMID:35471730) UniProt PMID:35471730 NCBI chr 2:12,472,927...12,475,116 JBrowse link
antigen processing and presentation of exogenous peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FCER1G Fc epsilon receptor Ig acts_upstream_of_or_within ISO (PMID:11911824) MGI PMID:11911824 NCBI chr 4:89,242,467...89,246,344
Ensembl chr 4:89,242,472...89,246,450
JBrowse link
G FCGR1A Fc fragment of IgG, high affinity Ia, receptor (CD64) acts_upstream_of_or_within ISO (PMID:11911824) MGI PMID:11911824 NCBI chr 4:99,233,632...99,242,531
Ensembl chr 4:99,233,611...99,242,586
JBrowse link
G IFI30 IFI30 lysosomal thiol reductase involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 2:59,629,762...59,633,714
Ensembl chr 2:59,629,767...59,633,733
JBrowse link
G LOC110258709 C-type lectin domain family 4 member A-like involved_in ISO (PMID:20530286) UniProt PMID:20530286
G LOC110259471 macrophage-expressed gene 1 protein-like involved_in ISO (PMID:37347855) UniProt PMID:37347855 NCBI chr 2:12,472,927...12,475,116 JBrowse link
G MFSD6 major facilitator superfamily domain containing 6 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:17010536) GO_Central
MGI
PMID:17010536 GO_REF:0000033 NCBI chr15:95,015,281...95,102,228
Ensembl chr15:95,015,325...95,102,219
JBrowse link
antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TAPBP TAP binding protein acts_upstream_of_or_within
involved_in
ISO (PMID:9716645) MGI
UniProt
PMID:9716645 NCBI chr 7:29,663,491...29,673,453
Ensembl chr 7:29,663,495...29,673,634
JBrowse link
antigen processing and presentation of exogenous peptide antigen via MHC class Ib term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLA-7 MHC class I antigen 7 involved_in ISO (PMID:23851683) UniProt PMID:23851683 NCBI chr 7:23,634,731...23,638,722 JBrowse link
G SLA-8 MHC class I antigen 8 acts_upstream_of_or_within ISO (PMID:16461341) MGI PMID:16461341 NCBI chr 7:23,622,352...23,625,818 JBrowse link
antigen processing and presentation of exogenous peptide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2M beta-2-microglobulin involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:126,865,767...126,878,501
Ensembl chr 1:126,864,468...126,871,554
JBrowse link
G B2M beta-2-microglobulin involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:126,837,721...126,844,043
Ensembl chr 1:126,835,143...126,981,582
JBrowse link
G CD74 CD74 molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:7679955), (PMID:8598040) Ensembl
MGI
PMID:7679955 PMID:8598040 GO_REF:0000107 NCBI chr 2:151,402,210...151,409,924
Ensembl chr 2:151,402,211...151,409,833
JBrowse link
G CTSS cathepsin S involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:98,415,273...98,442,952
Ensembl chr 4:98,417,883...98,442,950
JBrowse link
G FCER1G Fc epsilon receptor Ig acts_upstream_of_or_within ISO (PMID:14643301) MGI PMID:14643301 NCBI chr 4:89,242,467...89,246,344
Ensembl chr 4:89,242,472...89,246,450
JBrowse link
G FCGR2B Fc fragment of IgG, low affinity IIb, receptor (CD32) acts_upstream_of_or_within ISO (PMID:14643301) MGI PMID:14643301 NCBI chr 4:88,873,762...88,892,964 JBrowse link
G IFI30 IFI30 lysosomal thiol reductase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11701933) Ensembl
MGI
PMID:11701933 GO_REF:0000107 NCBI chr 2:59,629,762...59,633,714
Ensembl chr 2:59,629,767...59,633,733
JBrowse link
G LGMN legumain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:114,176,217...114,210,096
Ensembl chr 7:114,173,693...114,217,102
JBrowse link
G LOC100153139 HLA class II histocompatibility antigen, DRB1-4 beta chain-like involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:24,882,212...24,894,226 JBrowse link
G PIKFYVE phosphoinositide kinase, FYVE-type zinc finger containing involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:111,372,148...111,468,720
Ensembl chr15:111,372,173...111,467,899
JBrowse link
G SLA-DMA SLA-DM alpha chain acts_upstream_of_or_within
involved_in
ISO
IBA
(PMID:8598041)
(PMID:11714799)
(PMID:8598040)
(PMID:11027433)
MGI
GO_Central
PMID:8598040 PMID:8598041 PMID:11027433 PMID:11714799 GO_REF:0000033 NCBI chr 7:25,133,494...25,137,928
Ensembl chr 7:25,133,497...25,137,966
JBrowse link
G SLA-DMB MHC class II, DM beta involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:25,119,278...25,125,089
Ensembl chr 7:25,119,282...25,128,236
JBrowse link
G SLA-DOA major histocompatibility complex, class II, DO alpha involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
(PMID:9492004) Ensembl
GO_Central
MGI
PMID:9492004 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:25,178,866...25,182,665
Ensembl chr 7:25,178,881...25,182,707
JBrowse link
G SLA-DOB MHC class II, DO beta involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:25,030,435...25,038,196
Ensembl chr 7:25,030,438...25,037,962
JBrowse link
G SLA-DQA1 MHC class II histocompatibility antigen SLA-DQA involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:24,953,472...24,959,313 JBrowse link
G SLA-DQB1 SLA-DQ beta1 domain involved_in IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 7:24,969,034...24,977,238
Ensembl chr 7:24,967,113...24,977,240
JBrowse link
G SLA-DRA MHC class II DR-alpha involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
(PMID:11027433), (PMID:11714799) Ensembl
GO_Central
MGI
PMID:11027433 PMID:11714799 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:24,825,037...24,830,650
Ensembl chr 7:24,825,052...24,835,158
JBrowse link
G SLA-DRB1 MHC class II histocompatibility antigen SLA-DRB1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:24,901,386...24,914,016
Ensembl chr 7:24,881,775...24,914,053
JBrowse link
G TRAF6 TNF receptor associated factor 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:14499111) MGI
Ensembl
PMID:14499111 GO_REF:0000107 NCBI chr 2:24,602,749...24,628,263
Ensembl chr 2:24,602,804...24,626,072
JBrowse link
G UNC93B1 unc-93 homolog B1, TLR signaling regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16415873) Ensembl
MGI
PMID:16415873 GO_REF:0000107 NCBI chr 2:4,898,414...4,909,833
Ensembl chr 2:4,898,409...4,909,856
JBrowse link
antigen processing and presentation of exogenous protein antigen via MHC class Ib, TAP-dependent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2M beta-2-microglobulin acts_upstream_of_or_within ISO (PMID:16299293) MGI PMID:16299293 NCBI chr 1:126,837,721...126,844,043
Ensembl chr 1:126,835,143...126,981,582
JBrowse link
G SLA-8 MHC class I antigen 8 acts_upstream_of_or_within ISO (PMID:16299293) MGI PMID:16299293 NCBI chr 7:23,622,352...23,625,818 JBrowse link
G TAP2 transporter 2, ATP binding cassette subfamily B member acts_upstream_of_or_within ISO (PMID:16299293) MGI PMID:16299293 NCBI chr 7:25,045,085...25,056,915
Ensembl chr 7:25,043,840...25,056,922
JBrowse link
antigen processing and presentation of peptide antigen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTSL cathepsin L involved_in ISO (PMID:12021314), (PMID:9545226) UniProt PMID:9545226 PMID:12021314 NCBI chr10:27,668,523...27,674,705
Ensembl chr10:27,668,264...27,674,618
JBrowse link
G CTSS cathepsin S involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:98,415,273...98,442,952
Ensembl chr 4:98,417,883...98,442,950
JBrowse link
G CTSV cathepsin V involved_in ISS UniProt GO_REF:0000024 NCBI chr10:25,202,360...25,208,058
Ensembl chr10:25,202,389...25,209,210
JBrowse link
G SLA-DQB1 SLA-DQ beta1 domain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:24,969,034...24,977,238
Ensembl chr 7:24,967,113...24,977,240
JBrowse link
G SLC11A1 solute carrier family 11 member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17620357) Ensembl
MGI
PMID:17620357 GO_REF:0000107 NCBI chr15:120,434,100...120,446,396
Ensembl chr15:120,433,952...120,446,396
JBrowse link
antigen processing and presentation of peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCB9 ATP binding cassette subfamily B member 9 NOT|involved_in ISO (PMID:17977821) UniProt PMID:17977821 NCBI chr14:29,895,752...29,935,571
Ensembl chr14:29,904,174...29,935,560
JBrowse link
G B2M beta-2-microglobulin involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:126,865,767...126,878,501
Ensembl chr 1:126,864,468...126,871,554
JBrowse link
G B2M beta-2-microglobulin involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:126,837,721...126,844,043
Ensembl chr 1:126,835,143...126,981,582
JBrowse link
G LOC100513601 patr class I histocompatibility antigen, A-126 alpha chain-like involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:22,888,616...22,920,154 JBrowse link
G LOC100622689 patr class I histocompatibility antigen, A-126 alpha chain-like involved_in IEA UniProt GO_REF:0000043
G MR1 major histocompatibility complex, class I-related involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:122,592,510...122,611,462
Ensembl chr 9:122,592,532...122,609,022
JBrowse link
G SLA Src like adaptor involved_in IEA UniProt GO_REF:0000043 NCBI chr 4:8,166,829...8,247,396
Ensembl chr 4:8,189,232...8,247,388
JBrowse link
G SLA-1 MHC class I antigen 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:22,824,137...22,920,154 JBrowse link
G SLA-11 MHC class I antigen 11 involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:23,005,436...23,010,790 JBrowse link
G SLA-2 MHC class I antigen 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:22,916,747...22,959,405 JBrowse link
G SLA-3 MHC class I antigen 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:22,938,211...22,942,735 JBrowse link
G SLA-5 MHC class I antigen 5 involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:22,851,888...22,854,782
Ensembl chr 7:22,851,888...22,854,942
JBrowse link
G SLA-6 MHC class I antigen 6 involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:23,645,335...23,649,342 JBrowse link
G SLA-7 MHC class I antigen 7 involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:23,634,731...23,638,722 JBrowse link
G SLA-8 MHC class I antigen 8 involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:23,622,352...23,625,818 JBrowse link
G SLA-9 MHC class I antigen 9 involved_in IEA UniProt GO_REF:0000043
G SLA2 Src like adaptor 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr17:39,875,625...39,904,838
Ensembl chr17:39,875,628...39,902,940
JBrowse link
antigen processing and presentation of peptide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MARCHF1 membrane associated ring-CH-type finger 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:52,375,510...52,951,031
Ensembl chr 8:52,375,514...52,951,033
JBrowse link
G MARCHF8 membrane associated ring-CH-type finger 8 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:90,725,550...90,854,835
Ensembl chr14:90,725,574...90,854,828
JBrowse link
antigen processing and presentation of peptide or polysaccharide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100153139 HLA class II histocompatibility antigen, DRB1-4 beta chain-like involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:24,882,212...24,894,226 JBrowse link
G LOC106504372 DLA class II histocompatibility antigen, DR-1 beta chain-like involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:25,000,257...25,000,539 JBrowse link
G SLA-DMA SLA-DM alpha chain involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:25,133,494...25,137,928
Ensembl chr 7:25,133,497...25,137,966
JBrowse link
G SLA-DMB MHC class II, DM beta involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:25,119,278...25,125,089
Ensembl chr 7:25,119,282...25,128,236
JBrowse link
G SLA-DOA major histocompatibility complex, class II, DO alpha involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:25,178,866...25,182,665
Ensembl chr 7:25,178,881...25,182,707
JBrowse link
G SLA-DOB MHC class II, DO beta involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:25,030,435...25,038,196
Ensembl chr 7:25,030,438...25,037,962
JBrowse link
G SLA-DQA1 MHC class II histocompatibility antigen SLA-DQA involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:24,953,472...24,959,313 JBrowse link
G SLA-DQB1 SLA-DQ beta1 domain involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:24,969,034...24,977,238
Ensembl chr 7:24,967,113...24,977,240
JBrowse link
G SLA-DRA MHC class II DR-alpha involved_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000107 NCBI chr 7:24,825,037...24,830,650
Ensembl chr 7:24,825,052...24,835,158
JBrowse link
G SLA-DRB1 MHC class II histocompatibility antigen SLA-DRB1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:24,901,386...24,914,016
Ensembl chr 7:24,881,775...24,914,053
JBrowse link
antigen processing and presentation of polysaccharide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARL8B ADP ribosylation factor like GTPase 8B involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:61,640,619...61,696,819
Ensembl chr13:61,640,671...61,698,374
JBrowse link
antigen processing and presentation, endogenous lipid antigen via MHC class Ib term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD1.1 CD1 antigen involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:91,854,055...91,863,875 JBrowse link
G CD1D CD1d molecule involved_in IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 4:92,096,670...92,101,177
Ensembl chr 4:92,094,700...92,101,095
JBrowse link
G CD1E CD1e molecule involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:92,012,787...92,019,363
Ensembl chr 4:92,012,791...92,020,864
JBrowse link
G PCD1B CD1B antigen involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:92,035,122...92,040,724
Ensembl chr 4:92,031,712...92,040,742
JBrowse link
antigen processing and presentation, exogenous lipid antigen via MHC class Ib term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AP3B1 adaptor related protein complex 3 subunit beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14557411) Ensembl
MGI
PMID:14557411 GO_REF:0000107 NCBI chr 2:86,875,922...87,142,722
Ensembl chr 2:86,873,290...87,142,768
JBrowse link
G AP3D1 adaptor related protein complex 3 subunit delta 1 acts_upstream_of_or_within ISO (PMID:14557411) MGI PMID:14557411 NCBI chr 2:76,428,443...76,471,266
Ensembl chr 2:76,428,476...76,471,257
JBrowse link
G CD1.1 CD1 antigen involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:91,854,055...91,863,875 JBrowse link
G CD1D CD1d molecule involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:92,096,670...92,101,177
Ensembl chr 4:92,094,700...92,101,095
JBrowse link
G CD1E CD1e molecule involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:92,012,787...92,019,363
Ensembl chr 4:92,012,791...92,020,864
JBrowse link
G PCD1B CD1B antigen acts_upstream_of_or_within
involved_in
ISO
IBA
(PMID:14557411) MGI
GO_Central
PMID:14557411 GO_REF:0000033 NCBI chr 4:92,035,122...92,040,724
Ensembl chr 4:92,031,712...92,040,742
JBrowse link
B cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FCER2 Fc epsilon receptor II involved_in ISO (PMID:2167225) UniProt PMID:2167225 NCBI chr 2:71,454,046...71,468,149
Ensembl chr 2:71,453,824...71,468,149
JBrowse link
dendritic cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FCGR3A Fc fragment of IgG receptor IIIa involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:88,948,357...88,956,513 JBrowse link
G LOC110259471 macrophage-expressed gene 1 protein-like involved_in ISO (PMID:37347855) UniProt PMID:37347855 NCBI chr 2:12,472,927...12,475,116 JBrowse link
G WASHC1 WASH complex subunit 1 involved_in ISO (PMID:24886983) UniProt PMID:24886983 NCBI chr 5:67,395,737...67,412,408
Ensembl chr 5:67,394,875...67,412,431
JBrowse link
myeloid dendritic cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLA-DRA MHC class II DR-alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:24,825,037...24,830,650
Ensembl chr 7:24,825,052...24,835,158
JBrowse link
negative regulation of antigen processing and presentation of endogenous peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HFE homeostatic iron regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:20,758,604...20,767,004
Ensembl chr 7:20,758,741...20,767,000
JBrowse link
negative regulation of antigen processing and presentation of peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TAPBPL TAP binding protein like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:64,188,184...64,197,033
Ensembl chr 5:64,188,179...64,197,264
JBrowse link
negative regulation of antigen processing and presentation of peptide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLA-DOA major histocompatibility complex, class II, DO alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:25,178,866...25,182,665
Ensembl chr 7:25,178,881...25,182,707
JBrowse link
G SLA-DOB MHC class II, DO beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:25,030,435...25,038,196
Ensembl chr 7:25,030,438...25,037,962
JBrowse link
negative regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G THBS1 thrombospondin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:131,728,781...131,746,098
Ensembl chr 1:131,728,784...131,746,115
JBrowse link
negative regulation of dendritic cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD68 CD68 molecule involved_in ISO (PMID:21572087) ARUK-UCL PMID:21572087 NCBI chr12:52,874,754...52,877,256
Ensembl chr12:52,874,785...52,877,695
JBrowse link
G FGL2 fibrinogen like 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:29341118) Ensembl
MGI
PMID:29341118 GO_REF:0000107 NCBI chr 9:102,869,044...102,875,564
Ensembl chr 9:102,868,802...102,875,576
JBrowse link
G THBS1 thrombospondin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:131,728,781...131,746,098
Ensembl chr 1:131,728,784...131,746,115
JBrowse link
negative regulation of macrophage antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGL2 fibrinogen like 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:29341118) Ensembl
MGI
PMID:29341118 GO_REF:0000107 NCBI chr 9:102,869,044...102,875,564
Ensembl chr 9:102,868,802...102,875,576
JBrowse link
peptide antigen assembly with MHC class I protein complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2M beta-2-microglobulin involved_in ISO (PMID:36104323) UniProt PMID:36104323 NCBI chr 1:126,837,721...126,844,043
Ensembl chr 1:126,835,143...126,981,582
JBrowse link
G CALR calreticulin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:66,098,263...66,102,074
Ensembl chr 2:66,098,229...66,102,132
JBrowse link
G PDIA3 protein disulfide isomerase family A member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:127,786,174...127,814,096
Ensembl chr 1:127,785,772...127,814,196
JBrowse link
G TAPBP TAP binding protein involved_in IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 7:29,663,491...29,673,453
Ensembl chr 7:29,663,495...29,673,634
JBrowse link
G TAPBPL TAP binding protein like involved_in IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 5:64,188,184...64,197,033
Ensembl chr 5:64,188,179...64,197,264
JBrowse link
G ZBTB22 zinc finger and BTB domain containing 22 involved_in IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 7:29,673,006...29,676,614
Ensembl chr 7:29,673,027...29,675,593
JBrowse link
peptide antigen assembly with MHC class II protein complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2M beta-2-microglobulin involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:126,865,767...126,878,501
Ensembl chr 1:126,864,468...126,871,554
JBrowse link
G B2M beta-2-microglobulin involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:126,837,721...126,844,043
Ensembl chr 1:126,835,143...126,981,582
JBrowse link
G LOC100153139 HLA class II histocompatibility antigen, DRB1-4 beta chain-like involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:24,882,212...24,894,226 JBrowse link
G SLA-DMA SLA-DM alpha chain involved_in IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 7:25,133,494...25,137,928
Ensembl chr 7:25,133,497...25,137,966
JBrowse link
G SLA-DMB MHC class II, DM beta involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:25,119,278...25,125,089
Ensembl chr 7:25,119,282...25,128,236
JBrowse link
G SLA-DOA major histocompatibility complex, class II, DO alpha involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:25,178,866...25,182,665
Ensembl chr 7:25,178,881...25,182,707
JBrowse link
G SLA-DOB MHC class II, DO beta involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:25,030,435...25,038,196
Ensembl chr 7:25,030,438...25,037,962
JBrowse link
G SLA-DQA1 MHC class II histocompatibility antigen SLA-DQA involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:24,953,472...24,959,313 JBrowse link
G SLA-DQB1 SLA-DQ beta1 domain involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:24,969,034...24,977,238
Ensembl chr 7:24,967,113...24,977,240
JBrowse link
G SLA-DRA MHC class II DR-alpha involved_in IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 7:24,825,037...24,830,650
Ensembl chr 7:24,825,052...24,835,158
JBrowse link
G SLA-DRB1 MHC class II histocompatibility antigen SLA-DRB1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:24,901,386...24,914,016
Ensembl chr 7:24,881,775...24,914,053
JBrowse link
peptide antigen stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TAPBP TAP binding protein involved_in ISO (PMID:12594855) UniProt PMID:12594855 NCBI chr 7:29,663,491...29,673,453
Ensembl chr 7:29,663,495...29,673,634
JBrowse link
peptide antigen transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TAP2 transporter 2, ATP binding cassette subfamily B member involved_in ISO (PMID:1538751)
(PMID:8496691)
UniProt PMID:1538751 PMID:8496691 NCBI chr 7:25,045,085...25,056,915
Ensembl chr 7:25,043,840...25,056,922
JBrowse link
plasmacytoid dendritic cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC110258709 C-type lectin domain family 4 member A-like involved_in ISO (PMID:18258799), (PMID:20530286) UniProt PMID:18258799 PMID:20530286
positive regulation of antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLA-DQB1 SLA-DQ beta1 domain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:24,969,034...24,977,238
Ensembl chr 7:24,967,113...24,977,240
JBrowse link
positive regulation of antigen processing and presentation of peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TAP2 transporter 2, ATP binding cassette subfamily B member ISO RGD PMID:1758495 RGD:1299069 NCBI chr 7:25,045,085...25,056,915
Ensembl chr 7:25,043,840...25,056,922
JBrowse link
positive regulation of antigen processing and presentation of peptide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PYCARD PYD and CARD domain containing involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:17,305,921...17,307,521
Ensembl chr 3:17,306,099...17,307,786
JBrowse link
G TREM2 triggering receptor expressed on myeloid cells 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:36,465,921...36,471,509
Ensembl chr 7:36,465,324...36,471,516
JBrowse link
positive regulation of dendritic cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCL19 C-C motif chemokine ligand 19 involved_in ISO (PMID:15845453) BHF-UCL PMID:15845453 NCBI chr10:32,110,366...32,112,529
Ensembl chr10:32,110,065...32,112,734
JBrowse link
G CCL21 C-C motif chemokine ligand 21 involved_in ISO (PMID:15845453) BHF-UCL PMID:15845453 NCBI chr10:32,093,783...32,094,482
Ensembl chr10:32,093,763...32,096,224
JBrowse link
G CCR7 C-C motif chemokine receptor 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:21,857,286...21,869,211
Ensembl chr12:21,857,286...21,872,475
JBrowse link
G CD74 CD74 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:151,402,210...151,409,924
Ensembl chr 2:151,402,211...151,409,833
JBrowse link
G NOD1 nucleotide binding oligomerization domain containing 1 involved_in ISO (PMID:20008287) BHF-UCL PMID:20008287 NCBI chr18:42,464,667...42,509,135
Ensembl chr18:42,432,050...42,512,264
JBrowse link
G NOD2 nucleotide binding oligomerization domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:34,132,127...34,167,446
Ensembl chr 6:34,130,938...34,177,534
JBrowse link
G SLC11A1 solute carrier family 11 member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18984740) Ensembl
MGI
PMID:18984740 GO_REF:0000107 NCBI chr15:120,434,100...120,446,396
Ensembl chr15:120,433,952...120,446,396
JBrowse link
positive regulation of macrophage antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FAM3D FAM3 metabolism regulating signaling molecule D acts_upstream_of_or_within ISO (PMID:29853563) MGI PMID:29853563 NCBI chr13:40,375,536...40,456,057 JBrowse link
regulation of antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CST7 cystatin F acts_upstream_of ISO (PMID:22365146) ARUK-UCL PMID:22365146 NCBI chr17:30,758,000...30,766,472
Ensembl chr17:30,758,000...30,766,472
JBrowse link
G CTSS cathepsin S involved_in ISO (PMID:22365146) ARUK-UCL PMID:22365146 NCBI chr 4:98,415,273...98,442,952
Ensembl chr 4:98,417,883...98,442,950
JBrowse link
G PTPN22 protein tyrosine phosphatase non-receptor type 22 NOT|involved_in ISO (PMID:23871208) UniProt PMID:23871208 NCBI chr 4:106,692,102...106,758,101
Ensembl chr 4:106,686,604...106,758,099
JBrowse link
G YTHDF1 YTH N6-methyladenosine RNA binding protein F1 involved_in ISO (PMID:30728504) UniProt PMID:30728504 NCBI chr17:62,329,302...62,341,312
Ensembl chr17:62,329,302...62,341,413
JBrowse link
regulation of T cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WAS WASP actin nucleation promoting factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:42,774,597...42,793,055
Ensembl chr  X:42,774,588...42,793,055
JBrowse link
T cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ICAM1 intercellular adhesion molecule 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:2479693) Ensembl
MGI
PMID:2479693 GO_REF:0000107 NCBI chr 2:69,097,136...69,107,722
Ensembl chr 2:69,097,122...69,108,205
JBrowse link
G LOC110257883 lysine-specific demethylase 5D-like acts_upstream_of_or_within ISO (PMID:16301625) MGI PMID:16301625 NCBI chr  Y:39,582,253...39,631,823
Ensembl chr  Y:39,582,815...39,631,815
JBrowse link
G RFTN1 raftlin, lipid raft linker 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:3,454,448...3,675,072
Ensembl chr13:3,454,454...3,674,998
JBrowse link
G TREX1 three prime repair exonuclease 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24218451) Ensembl
MGI
PMID:24218451 GO_REF:0000107 NCBI chr13:31,177,604...31,180,764
Ensembl chr13:31,179,291...31,180,747
JBrowse link
G UNC93B1 unc-93 homolog B1, TLR signaling regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16415873) Ensembl
MGI
PMID:16415873 GO_REF:0000107 NCBI chr 2:4,898,414...4,909,833
Ensembl chr 2:4,898,409...4,909,856
JBrowse link

Term paths to the root