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ONTOLOGY REPORT - ANNOTATIONS


Term:antigen processing and presentation
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Accession:GO:0019882 term browser browse the term
Definition:The process in which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex.
Synonyms:exact_synonym: antigen presentation;   antigen processing
 alt_id: GO:0030333
 xref: Wikipedia:Antigen_presentation



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antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AL645941.2 novel protein involved_in IEA InterPro GO_REF:0000002 Ensembl chr 6:32,937,364...32,953,122 JBrowse link
G AP3B1 adaptor related protein complex 3 subunit beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14557411) Ensembl
MGI
PMID:14557411 GO_REF:0000107 NCBI chr 5:78,000,522...78,294,698
Ensembl chr 5:77,991,640...78,294,762
JBrowse link
G AP3D1 adaptor related protein complex 3 subunit delta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14557411) Ensembl
MGI
PMID:14557411 GO_REF:0000107 NCBI chr19:2,100,988...2,164,616
Ensembl chr19:2,100,988...2,164,468
JBrowse link
G CD1D CD1d molecule acts_upstream_of_or_within ISO (PMID:11754812) MGI PMID:11754812 NCBI chr 1:158,178,030...158,186,427
Ensembl chr 1:158,178,030...158,186,427
JBrowse link
G CD209 CD209 molecule involved_in NAS (PMID:11337487) UniProt PMID:11337487 NCBI chr19:7,739,993...7,747,534
Ensembl chr19:7,739,993...7,747,564
JBrowse link
G CD74 CD74 molecule involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
(PMID:11754812), (PMID:3864916), (PMID:7985028)
(PMID:9432982)
Ensembl
MGI
GO_Central
InterPro
PMID:3864916 PMID:7985028 PMID:9432982 PMID:11754812 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:150,401,639...150,412,910
Ensembl chr 5:150,401,637...150,412,969
JBrowse link
G CD8A CD8 subunit alpha involved_in NAS (PMID:2496167) UniProt PMID:2496167 NCBI chr 2:86,784,605...86,808,396
Ensembl chr 2:86,784,610...86,808,396
JBrowse link
G CLEC4M C-type lectin domain family 4 member M involved_in NAS (PMID:11337487) UniProt PMID:11337487 NCBI chr19:7,763,243...7,769,605
Ensembl chr19:7,763,210...7,769,605
JBrowse link
G CTSH cathepsin H involved_in TAS (PMID:15196205) UniProt PMID:15196205 NCBI chr15:78,921,058...78,945,046
Ensembl chr15:78,921,058...78,949,574
JBrowse link
G CTSL cathepsin L involved_in TAS (PMID:15196205) UniProt PMID:15196205 NCBI chr 9:87,726,119...87,731,469
Ensembl chr 9:87,724,051...87,731,469
JBrowse link
G CTSS cathepsin S involved_in TAS (PMID:15196205) UniProt PMID:15196205 NCBI chr 1:150,730,188...150,765,778
Ensembl chr 1:150,730,079...150,765,957
JBrowse link
G EXT1 exostosin glycosyltransferase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23733868) Ensembl
MGI
PMID:23733868 GO_REF:0000107 NCBI chr 8:117,794,490...118,111,826
Ensembl chr 8:117,794,490...118,111,826
JBrowse link
G FLT3 fms related receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (PMID:20457904) MGI PMID:20457904 NCBI chr13:28,003,274...28,100,576
Ensembl chr13:28,003,274...28,100,592
JBrowse link
G GBA1 glucosylceramidase beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22665763) Ensembl
MGI
PMID:22665763 GO_REF:0000107 NCBI chr 1:155,234,452...155,244,627
Ensembl chr 1:155,234,452...155,244,699
JBrowse link
G HFE homeostatic iron regulator NOT|involved_in IC (PMID:9546397) BHF-UCL PMID:9546397 NCBI chr 6:26,087,429...26,098,343
Ensembl chr 6:26,087,226...26,098,343
JBrowse link
G HLA-A major histocompatibility complex, class I, A involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20038604) InterPro
MGI
PMID:20038604 GO_REF:0000002 NCBI chr 6:29,942,532...29,945,870
Ensembl chr 6:29,941,260...29,949,572
JBrowse link
G HLA-B major histocompatibility complex, class I, B involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:31,353,875...31,357,179
Ensembl chr 6:31,353,872...31,367,067
JBrowse link
G HLA-C major histocompatibility complex, class I, C involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:31,268,749...31,272,092
Ensembl chr 6:31,268,749...31,272,130
JBrowse link
G HLA-DMA major histocompatibility complex, class II, DM alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9432982)
(PMID:11148202), (PMID:7584146), (PMID:7985028)
InterPro
MGI
PMID:7584146 PMID:7985028 PMID:9432982 PMID:11148202 GO_REF:0000002 NCBI chr 6:32,948,618...32,953,097
Ensembl chr 6:32,948,613...32,969,094
JBrowse link
G HLA-DMB major histocompatibility complex, class II, DM beta involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11148202) InterPro
MGI
PMID:11148202 GO_REF:0000002 NCBI chr 6:32,934,636...32,941,028
Ensembl chr 6:32,934,629...32,941,028
JBrowse link
G HLA-DOA major histocompatibility complex, class II, DO alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11069069) Ensembl
MGI
InterPro
PMID:11069069 GO_REF:0000002 GO_REF:0000107 NCBI chr 6:33,004,182...33,009,591
Ensembl chr 6:33,004,182...33,009,591
JBrowse link
G HLA-DOB major histocompatibility complex, class II, DO beta involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:32,812,763...32,817,002
Ensembl chr 6:32,812,763...32,820,466
JBrowse link
G HLA-DPA1 major histocompatibility complex, class II, DP alpha 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:33,064,569...33,080,748
Ensembl chr 6:33,064,569...33,080,775
JBrowse link
G HLA-DPB1 major histocompatibility complex, class II, DP beta 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:33,075,990...33,089,696
Ensembl chr 6:33,075,936...33,089,696
JBrowse link
G HLA-DQA1 major histocompatibility complex, class II, DQ alpha 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9432982) InterPro
MGI
PMID:9432982 GO_REF:0000002 NCBI chr 6:32,637,406...32,655,272
Ensembl chr 6:32,628,179...32,647,062
JBrowse link
G HLA-DQA2 major histocompatibility complex, class II, DQ alpha 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:32,741,391...32,747,198
Ensembl chr 6:32,741,391...32,747,198
JBrowse link
G HLA-DQB1 major histocompatibility complex, class II, DQ beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9432982) InterPro
MGI
PMID:9432982 GO_REF:0000002 NCBI chr 6:32,659,467...32,666,657
Ensembl chr 6:32,659,467...32,668,383
JBrowse link
G HLA-DQB2 major histocompatibility complex, class II, DQ beta 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:32,756,098...32,763,532
Ensembl chr 6:32,756,098...32,763,532
JBrowse link
G HLA-DQB3 major histocompatibility complex, class II, DQ beta 3 involved_in IEA InterPro GO_REF:0000002 Ensembl chr 6:32,730,758...32,731,695 JBrowse link
G HLA-DRA major histocompatibility complex, class II, DR alpha involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:32,439,887...32,445,046
Ensembl chr 6:32,439,878...32,445,046
JBrowse link
G HLA-DRB1 major histocompatibility complex, class II, DR beta 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:32,578,775...32,589,848
Ensembl chr 6:32,577,902...32,589,848
JBrowse link
G HLA-DRB2 major histocompatibility complex, class II, DR beta 2 (pseudogene) involved_in IEA InterPro GO_REF:0000002
G HLA-DRB3 major histocompatibility complex, class II, DR beta 3 involved_in IEA InterPro GO_REF:0000002
G HLA-DRB4 major histocompatibility complex, class II, DR beta 4 involved_in IEA InterPro GO_REF:0000002
G HLA-DRB5 major histocompatibility complex, class II, DR beta 5 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:32,517,353...32,530,287
Ensembl chr 6:32,517,353...32,530,287
JBrowse link
G HLA-DRB7 major histocompatibility complex, class II, DR beta 7 (pseudogene) involved_in IEA InterPro GO_REF:0000002
G HLA-DRB9 major histocompatibility complex, class II, DR beta 9 (pseudogene) involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:32,459,820...32,460,089
Ensembl chr 6:32,459,821...32,473,500
JBrowse link
G HLA-E major histocompatibility complex, class I, E involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:30,489,509...30,494,194
Ensembl chr 6:30,489,509...30,494,194
JBrowse link
G HLA-F major histocompatibility complex, class I, F involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:29,723,434...29,738,532
Ensembl chr 6:29,722,775...29,738,528
JBrowse link
G HLA-H major histocompatibility complex, class I, H (pseudogene) involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:29,887,573...29,891,079
Ensembl chr 6:29,887,752...29,890,482
Ensembl chr 6:29,887,752...29,890,482
JBrowse link
G IFNG interferon gamma acts_upstream_of_or_within ISO (PMID:15356141) MGI PMID:15356141 NCBI chr12:68,154,768...68,159,740
Ensembl chr12:68,154,768...68,159,740
JBrowse link
G IGHM immunoglobulin heavy constant mu acts_upstream_of_or_within ISO (PMID:11854359) MGI PMID:11854359 NCBI chr14:105,851,966...105,856,217
Ensembl chr14:105,851,705...105,856,218
JBrowse link
G PSAP prosaposin acts_upstream_of_or_within ISO (PMID:14684827) MGI PMID:14684827 NCBI chr10:71,816,298...71,851,251
Ensembl chr10:71,816,298...71,851,251
JBrowse link
G PSMB8 proteasome 20S subunit beta 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15356141) Ensembl
MGI
PMID:15356141 GO_REF:0000107 NCBI chr 6:32,840,717...32,844,679
Ensembl chr 6:32,840,717...32,844,679
JBrowse link
G PSMB9 proteasome 20S subunit beta 9 acts_upstream_of_or_within ISO (PMID:15356141) MGI PMID:15356141 NCBI chr 6:32,854,192...32,859,851
Ensembl chr 6:32,844,136...32,860,734
JBrowse link
G RAB10 RAB10, member RAS oncogene family involved_in IMP (PMID:19717423) UniProt PMID:19717423 NCBI chr 2:26,033,285...26,137,454
Ensembl chr 2:26,034,084...26,137,454
JBrowse link
G RAB27A RAB27A, member RAS oncogene family involved_in IMP (PMID:19717423) UniProt PMID:19717423 NCBI chr15:55,202,966...55,289,813
Ensembl chr15:55,202,966...55,319,113
JBrowse link
G RAB32 RAB32, member RAS oncogene family involved_in IMP (PMID:19717423) UniProt PMID:19717423 NCBI chr 6:146,543,833...146,554,953
Ensembl chr 6:146,543,833...146,554,953
JBrowse link
G RAB33A RAB33A, member RAS oncogene family involved_in IMP (PMID:19717423) UniProt PMID:19717423 NCBI chr  X:130,110,623...130,184,870
Ensembl chr  X:130,171,962...130,184,870
JBrowse link
G RAB34 RAB34, member RAS oncogene family involved_in IMP (PMID:19717423) UniProt PMID:19717423 NCBI chr17:28,714,281...28,718,428
Ensembl chr17:28,714,281...28,718,429
JBrowse link
G RAB35 RAB35, member RAS oncogene family involved_in IMP (PMID:19717423) UniProt PMID:19717423 NCBI chr12:120,095,099...120,116,753
Ensembl chr12:120,095,099...120,117,502
JBrowse link
G RAB3B RAB3B, member RAS oncogene family involved_in IMP (PMID:19717423) UniProt PMID:19717423 NCBI chr 1:51,907,956...51,990,700
Ensembl chr 1:51,907,956...51,990,700
JBrowse link
G RAB3C RAB3C, member RAS oncogene family involved_in IMP (PMID:19717423) UniProt PMID:19717423 NCBI chr 5:58,582,152...58,859,394
Ensembl chr 5:58,582,221...58,859,394
JBrowse link
G RAB4A RAB4A, member RAS oncogene family involved_in IMP (PMID:19717423) UniProt PMID:19717423 NCBI chr 1:229,271,111...229,305,894
Ensembl chr 1:229,271,062...229,305,894
JBrowse link
G RAB5B RAB5B, member RAS oncogene family involved_in IMP (PMID:19717423) UniProt PMID:19717423 NCBI chr12:55,973,949...55,996,683
Ensembl chr12:55,973,913...55,996,683
JBrowse link
G RAB6A RAB6A, member RAS oncogene family involved_in IMP (PMID:19717423) UniProt PMID:19717423 NCBI chr11:73,675,638...73,761,074
Ensembl chr11:73,675,638...73,761,137
JBrowse link
G RAB8B RAB8B, member RAS oncogene family involved_in IMP (PMID:19717423) UniProt PMID:19717423 NCBI chr15:63,189,606...63,267,776
Ensembl chr15:63,189,560...63,267,776
JBrowse link
G RELB RELB proto-oncogene, NF-kB subunit involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:7845467) Ensembl
MGI
PMID:7845467 GO_REF:0000107 NCBI chr19:45,001,464...45,038,192
Ensembl chr19:45,001,461...45,038,192
JBrowse link
G UNC93B1 unc-93 homolog B1, TLR signaling regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20457904) Ensembl
MGI
PMID:20457904 GO_REF:0000107 NCBI chr11:67,991,100...68,004,097
Ensembl chr11:67,991,100...68,004,982
JBrowse link
G WDFY4 WDFY family member 4 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
(PMID:30409884) Ensembl
MGI
GO_Central
PMID:30409884 GO_REF:0000033 GO_REF:0000107 NCBI chr10:48,684,873...48,982,956
Ensembl chr10:48,684,873...48,982,956
JBrowse link
antigen processing and presentation following phagocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARL8B ARF like GTPase 8B involved_in IMP (PMID:21802320) UniProt PMID:21802320 NCBI chr 3:5,122,292...5,180,911
Ensembl chr 3:5,122,249...5,180,911
JBrowse link
antigen processing and presentation of endogenous antigen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG5 autophagy related 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23382543) Ensembl
MGI
PMID:23382543 GO_REF:0000107 NCBI chr 6:106,184,476...106,325,760
Ensembl chr 6:106,045,423...106,325,791
JBrowse link
G CD74 CD74 molecule involved_in NAS (PMID:10981873) UniProt PMID:10981873 NCBI chr 5:150,401,639...150,412,910
Ensembl chr 5:150,401,637...150,412,969
JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AL669918.1 novel protein, TAP2-HLA-DOB readthrough involved_in IEA InterPro GO_REF:0000002 Ensembl chr 6:32,813,767...32,838,822 JBrowse link
G B2M beta-2-microglobulin involved_in IGI (PMID:24643698) BHF-UCL PMID:24643698 NCBI chr15:44,711,517...44,718,145
Ensembl chr15:44,711,358...44,718,851
JBrowse link
G ERAP1 endoplasmic reticulum aminopeptidase 1 involved_in NAS
TAS
(PMID:12748171)
(PMID:15691326)
UniProt
HGNC-UCL
PMID:12748171 PMID:15691326 NCBI chr 5:96,760,813...96,935,854
Ensembl chr 5:96,760,810...96,808,100
JBrowse link
G ERAP2 endoplasmic reticulum aminopeptidase 2 involved_in TAS (PMID:15691326) HGNC-UCL PMID:15691326 NCBI chr 5:96,875,939...96,919,716
Ensembl chr 5:96,875,986...96,919,703
JBrowse link
G HLA-A major histocompatibility complex, class I, A involved_in IDA (PMID:1402688), (PMID:20364150), (PMID:24643698) UniProt PMID:1402688 PMID:20364150 PMID:24643698 NCBI chr 6:29,942,532...29,945,870
Ensembl chr 6:29,941,260...29,949,572
JBrowse link
G IDE insulin degrading enzyme involved_in IMP (PMID:20364150) UniProt PMID:20364150 NCBI chr10:92,451,684...92,574,093
Ensembl chr10:92,451,684...92,574,096
JBrowse link
G TAP1 transporter 1, ATP binding cassette subfamily B member involved_in IMP
IBA
IDA
(PMID:11133832) UniProt
GO_Central
PMID:11133832 GO_REF:0000033 NCBI chr 6:32,845,209...32,853,704
Ensembl chr 6:32,845,209...32,853,816
JBrowse link
G TAP2 transporter 2, ATP binding cassette subfamily B member acts_upstream_of_or_within
involved_in
ISO
IDA
IEA
IMP
PMID:1758495
(PMID:8496691)
(PMID:1538751)
MGI
UniProt
InterPro
PMID:1538751 PMID:1758495 PMID:8496691 GO_REF:0000002 RGD:1299069 NCBI chr 6:32,821,831...32,838,739
Ensembl chr 6:32,821,833...32,838,739
JBrowse link
G TAPBP TAP binding protein involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:33,299,694...33,314,078
Ensembl chr 6:33,299,694...33,314,284
JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-dependent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HLA-A major histocompatibility complex, class I, A involved_in IMP (PMID:8630735) UniProt PMID:8630735 NCBI chr 6:29,942,532...29,945,870
Ensembl chr 6:29,941,260...29,949,572
JBrowse link
G TAP2 transporter 2, ATP binding cassette subfamily B member involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:1538753) Ensembl
MGI
PMID:1538753 GO_REF:0000107 NCBI chr 6:32,821,831...32,838,739
Ensembl chr 6:32,821,833...32,838,739
JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-independent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AZGP1 alpha-2-glycoprotein 1, zinc-binding involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:99,966,730...99,976,031
Ensembl chr 7:99,966,720...99,976,042
JBrowse link
G HLA-A major histocompatibility complex, class I, A involved_in IDA
IBA
(PMID:22031944) UniProt
GO_Central
PMID:22031944 GO_REF:0000033 NCBI chr 6:29,942,532...29,945,870
Ensembl chr 6:29,941,260...29,949,572
JBrowse link
G HLA-B major histocompatibility complex, class I, B involved_in IDA
IBA
(PMID:22031944) UniProt
GO_Central
PMID:22031944 GO_REF:0000033 NCBI chr 6:31,353,875...31,357,179
Ensembl chr 6:31,353,872...31,367,067
JBrowse link
G HLA-C major histocompatibility complex, class I, C involved_in IDA
IBA
(PMID:22031944) UniProt
GO_Central
PMID:22031944 GO_REF:0000033 NCBI chr 6:31,268,749...31,272,092
Ensembl chr 6:31,268,749...31,272,130
JBrowse link
G HLA-E major histocompatibility complex, class I, E involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:30,489,509...30,494,194
Ensembl chr 6:30,489,509...30,494,194
JBrowse link
G HLA-F major histocompatibility complex, class I, F involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:29,723,434...29,738,532
Ensembl chr 6:29,722,775...29,738,528
JBrowse link
G HLA-G major histocompatibility complex, class I, G involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:29,826,474...29,831,021
Ensembl chr 6:29,826,967...29,831,125
JBrowse link
G HLA-H major histocompatibility complex, class I, H (pseudogene) involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:29,887,573...29,891,079
Ensembl chr 6:29,887,752...29,890,482
Ensembl chr 6:29,887,752...29,890,482
JBrowse link
G RAET1E retinoic acid early transcript 1E involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:149,883,179...149,898,113
Ensembl chr 6:149,883,179...149,898,113
JBrowse link
G RAET1G retinoic acid early transcript 1G involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:149,916,878...149,923,121
Ensembl chr 6:149,916,878...149,923,121
JBrowse link
G RAET1L retinoic acid early transcript 1L involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:150,018,334...150,025,532
Ensembl chr 6:150,018,334...150,025,532
JBrowse link
G ULBP1 UL16 binding protein 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:149,963,943...149,973,715
Ensembl chr 6:149,963,943...149,973,715
JBrowse link
G ULBP2 UL16 binding protein 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:149,942,014...149,949,235
Ensembl chr 6:149,942,014...149,949,235
JBrowse link
G ULBP3 UL16 binding protein 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:150,061,053...150,069,121
Ensembl chr 6:150,061,053...150,069,121
JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class Ib term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AZGP1 alpha-2-glycoprotein 1, zinc-binding involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:99,966,730...99,976,031
Ensembl chr 7:99,966,720...99,976,042
JBrowse link
G HLA-A major histocompatibility complex, class I, A involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:29,942,532...29,945,870
Ensembl chr 6:29,941,260...29,949,572
JBrowse link
G HLA-B major histocompatibility complex, class I, B involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:31,353,875...31,357,179
Ensembl chr 6:31,353,872...31,367,067
JBrowse link
G HLA-C major histocompatibility complex, class I, C involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:31,268,749...31,272,092
Ensembl chr 6:31,268,749...31,272,130
JBrowse link
G HLA-E major histocompatibility complex, class I, E involved_in IDA
IBA
(PMID:9754572) UniProt
GO_Central
PMID:9754572 GO_REF:0000033 NCBI chr 6:30,489,509...30,494,194
Ensembl chr 6:30,489,509...30,494,194
JBrowse link
G HLA-F major histocompatibility complex, class I, F involved_in IDA
IBA
(PMID:28636952) UniProt
GO_Central
PMID:28636952 GO_REF:0000033 NCBI chr 6:29,723,434...29,738,532
Ensembl chr 6:29,722,775...29,738,528
JBrowse link
G HLA-G major histocompatibility complex, class I, G involved_in
acts_upstream_of_or_within
IDA
ISO
IBA
(PMID:7584149), (PMID:8805247)
(PMID:8464890)
UniProt
MGI
GO_Central
PMID:7584149 PMID:8464890 PMID:8805247 GO_REF:0000033 NCBI chr 6:29,826,474...29,831,021
Ensembl chr 6:29,826,967...29,831,125
JBrowse link
G HLA-H major histocompatibility complex, class I, H (pseudogene) involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:29,887,573...29,891,079
Ensembl chr 6:29,887,752...29,890,482
Ensembl chr 6:29,887,752...29,890,482
JBrowse link
G RAET1E retinoic acid early transcript 1E involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:149,883,179...149,898,113
Ensembl chr 6:149,883,179...149,898,113
JBrowse link
G RAET1G retinoic acid early transcript 1G involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:149,916,878...149,923,121
Ensembl chr 6:149,916,878...149,923,121
JBrowse link
G RAET1L retinoic acid early transcript 1L involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:150,018,334...150,025,532
Ensembl chr 6:150,018,334...150,025,532
JBrowse link
G ULBP1 UL16 binding protein 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:149,963,943...149,973,715
Ensembl chr 6:149,963,943...149,973,715
JBrowse link
G ULBP2 UL16 binding protein 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:149,942,014...149,949,235
Ensembl chr 6:149,942,014...149,949,235
JBrowse link
G ULBP3 UL16 binding protein 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:150,061,053...150,069,121
Ensembl chr 6:150,061,053...150,069,121
JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-dependent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HLA-E major histocompatibility complex, class I, E acts_upstream_of_or_within ISO (PMID:1538753) MGI PMID:1538753 NCBI chr 6:30,489,509...30,494,194
Ensembl chr 6:30,489,509...30,494,194
JBrowse link
G TAP2 transporter 2, ATP binding cassette subfamily B member involved_in
acts_upstream_of_or_within
IMP
ISO
IEA
(PMID:1538751)
(PMID:1538753)
UniProt
MGI
Ensembl
PMID:1538751 PMID:1538753 GO_REF:0000107 NCBI chr 6:32,821,831...32,838,739
Ensembl chr 6:32,821,833...32,838,739
JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HLA-DRA major histocompatibility complex, class II, DR alpha involved_in IDA (PMID:15322540) UniProt PMID:15322540 NCBI chr 6:32,439,887...32,445,046
Ensembl chr 6:32,439,878...32,445,046
JBrowse link
G HLA-DRB1 major histocompatibility complex, class II, DR beta 1 involved_in IDA (PMID:15322540) UniProt PMID:15322540 NCBI chr 6:32,578,775...32,589,848
Ensembl chr 6:32,577,902...32,589,848
JBrowse link
antigen processing and presentation of exogenous antigen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FCGR1A Fc gamma receptor Ia involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11911823) Ensembl
MGI
PMID:11911823 GO_REF:0000107 NCBI chr 1:149,782,694...149,800,609
Ensembl chr 1:149,782,671...149,791,675
JBrowse link
G MR1 major histocompatibility complex, class I-related involved_in IDA (PMID:27043408) UniProt PMID:27043408 NCBI chr 1:181,033,387...181,061,938
Ensembl chr 1:181,033,374...181,061,938
JBrowse link
G PSME1 proteasome activator subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15944286) Ensembl
MGI
PMID:15944286 GO_REF:0000107 NCBI chr14:24,136,194...24,138,962
Ensembl chr14:24,136,163...24,138,967
JBrowse link
G PSME2 proteasome activator subunit 2 acts_upstream_of_or_within ISO (PMID:15944286) MGI PMID:15944286 NCBI chr14:24,143,365...24,146,610
Ensembl chr14:24,143,362...24,147,570
JBrowse link
antigen processing and presentation of exogenous peptide antigen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MPEG1 macrophage expressed 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr11:59,208,510...59,212,927
Ensembl chr11:59,208,510...59,212,927
JBrowse link
antigen processing and presentation of exogenous peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLEC4A C-type lectin domain family 4 member A involved_in IDA (PMID:20530286) UniProt PMID:20530286 NCBI chr12:8,102,907...8,138,607
Ensembl chr12:8,123,617...8,138,607
JBrowse link
G FCER1G Fc epsilon receptor Ig involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:11911824) GO_Central
MGI
PMID:11911824 GO_REF:0000033 NCBI chr 1:161,215,295...161,219,245
Ensembl chr 1:161,215,234...161,220,699
JBrowse link
G FCGR1A Fc gamma receptor Ia involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11911824) Ensembl
MGI
PMID:11911824 GO_REF:0000107 NCBI chr 1:149,782,694...149,800,609
Ensembl chr 1:149,782,671...149,791,675
JBrowse link
G HLA-A major histocompatibility complex, class I, A involved_in IDA (PMID:12138174), (PMID:7504010) UniProt PMID:7504010 PMID:12138174 NCBI chr 6:29,942,532...29,945,870
Ensembl chr 6:29,941,260...29,949,572
JBrowse link
G IFI30 IFI30 lysosomal thiol reductase involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr19:18,173,813...18,178,117
Ensembl chr19:18,173,162...18,178,117
JBrowse link
G MFSD6 major facilitator superfamily domain containing 6 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:17010536) GO_Central
MGI
PMID:17010536 GO_REF:0000033 NCBI chr 2:190,407,576...190,502,314
Ensembl chr 2:190,408,355...190,509,205
JBrowse link
G MPEG1 macrophage expressed 1 involved_in ISS (PMID:37347855) UniProt PMID:37347855 GO_REF:0000024 NCBI chr11:59,208,510...59,212,927
Ensembl chr11:59,208,510...59,212,927
JBrowse link
antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IKBKB inhibitor of nuclear factor kappa B kinase subunit beta involved_in TAS Reactome Reactome:R-HSA-1236974 NCBI chr 8:42,271,302...42,332,460
Ensembl chr 8:42,271,302...42,332,460
JBrowse link
G TAPBP TAP binding protein acts_upstream_of_or_within
involved_in
ISO (PMID:9716645) MGI
UniProt
PMID:9716645 NCBI chr 6:33,299,694...33,314,078
Ensembl chr 6:33,299,694...33,314,284
JBrowse link
antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LNPEP leucyl and cystinyl aminopeptidase involved_in TAS Reactome Reactome:R-HSA-1236977 NCBI chr 5:96,936,080...97,037,513
Ensembl chr 5:96,935,394...97,037,513
JBrowse link
antigen processing and presentation of exogenous peptide antigen via MHC class Ib term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HLA-E major histocompatibility complex, class I, E involved_in IDA (PMID:20195504), (PMID:30087334) UniProt PMID:20195504 PMID:30087334 NCBI chr 6:30,489,509...30,494,194
Ensembl chr 6:30,489,509...30,494,194
JBrowse link
G HLA-F major histocompatibility complex, class I, F involved_in IDA (PMID:23851683) UniProt PMID:23851683 NCBI chr 6:29,723,434...29,738,532
Ensembl chr 6:29,722,775...29,738,528
JBrowse link
G HLA-G major histocompatibility complex, class I, G acts_upstream_of_or_within ISO (PMID:16461341) MGI PMID:16461341 NCBI chr 6:29,826,474...29,831,021
Ensembl chr 6:29,826,967...29,831,125
JBrowse link
antigen processing and presentation of exogenous peptide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2M beta-2-microglobulin involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:44,711,517...44,718,145
Ensembl chr15:44,711,358...44,718,851
JBrowse link
G CD74 CD74 molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:7679955), (PMID:8598040) Ensembl
MGI
PMID:7679955 PMID:8598040 GO_REF:0000107 NCBI chr 5:150,401,639...150,412,910
Ensembl chr 5:150,401,637...150,412,969
JBrowse link
G CTSD cathepsin D involved_in TAS Reactome Reactome:R-HSA-2132295 NCBI chr11:1,752,755...1,763,927
Ensembl chr11:1,752,752...1,764,573
JBrowse link
G CTSE cathepsin E involved_in IDA
IBA
IEA
(PMID:8765029) UniProt
GO_Central
Ensembl
PMID:8765029 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:206,009,264...206,023,895
Ensembl chr 1:206,008,535...206,023,909
JBrowse link
G CTSF cathepsin F involved_in TAS Reactome Reactome:R-HSA-2132295 NCBI chr11:66,563,464...66,568,606
Ensembl chr11:66,563,464...66,568,879
JBrowse link
G CTSL cathepsin L involved_in TAS Reactome Reactome:R-HSA-2132295 NCBI chr 9:87,726,119...87,731,469
Ensembl chr 9:87,724,051...87,731,469
JBrowse link
G CTSS cathepsin S involved_in IDA
TAS
(PMID:30612035) UniProt
Reactome
PMID:30612035 Reactome:R-HSA-2132295 NCBI chr 1:150,730,188...150,765,778
Ensembl chr 1:150,730,079...150,765,957
JBrowse link
G CTSV cathepsin V involved_in TAS Reactome Reactome:R-HSA-2132295 NCBI chr 9:97,029,677...97,039,643
Ensembl chr 9:97,029,677...97,156,556
JBrowse link
G DNM2 dynamin 2 involved_in TAS Reactome Reactome:R-HSA-2132295 NCBI chr19:10,718,079...10,831,903
Ensembl chr19:10,718,055...10,833,488
JBrowse link
G FCER1G Fc epsilon receptor Ig involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:14643301) GO_Central
MGI
PMID:14643301 GO_REF:0000033 NCBI chr 1:161,215,295...161,219,245
Ensembl chr 1:161,215,234...161,220,699
JBrowse link
G FCGR2B Fc gamma receptor IIb involved_in
acts_upstream_of_or_within
ISS
ISO
(PMID:26683154)
(PMID:14643301)
ARUK-UCL
MGI
PMID:14643301 PMID:26683154 NCBI chr 1:161,647,243...161,678,654
Ensembl chr 1:161,663,143...161,678,654
JBrowse link
G HLA-DMA major histocompatibility complex, class II, DM alpha acts_upstream_of_or_within
involved_in
ISO
IBA
(PMID:8598041)
(PMID:11714799)
(PMID:8598040)
(PMID:11027433)
MGI
GO_Central
PMID:8598040 PMID:8598041 PMID:11027433 PMID:11714799 GO_REF:0000033 NCBI chr 6:32,948,618...32,953,097
Ensembl chr 6:32,948,613...32,969,094
JBrowse link
G HLA-DMB major histocompatibility complex, class II, DM beta involved_in
acts_upstream_of_or_within
IMP
IBA
ISO
(PMID:8139689)
(PMID:11027433)
UniProt
GO_Central
MGI
PMID:8139689 PMID:11027433 GO_REF:0000033 NCBI chr 6:32,934,636...32,941,028
Ensembl chr 6:32,934,629...32,941,028
JBrowse link
G HLA-DOA major histocompatibility complex, class II, DO alpha involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
(PMID:9492004) Ensembl
GO_Central
MGI
PMID:9492004 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:33,004,182...33,009,591
Ensembl chr 6:33,004,182...33,009,591
JBrowse link
G HLA-DOB major histocompatibility complex, class II, DO beta involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:32,812,763...32,817,002
Ensembl chr 6:32,812,763...32,820,466
JBrowse link
G HLA-DPA1 major histocompatibility complex, class II, DP alpha 1 involved_in IMP
IBA
(PMID:20356827) UniProt
GO_Central
PMID:20356827 GO_REF:0000033 NCBI chr 6:33,064,569...33,080,748
Ensembl chr 6:33,064,569...33,080,775
JBrowse link
G HLA-DPB1 major histocompatibility complex, class II, DP beta 1 involved_in IDA
IBA
IMP
(PMID:32341563)
(PMID:20356827)
UniProt
GO_Central
PMID:20356827 PMID:32341563 GO_REF:0000033 NCBI chr 6:33,075,990...33,089,696
Ensembl chr 6:33,075,936...33,089,696
JBrowse link
G HLA-DQA1 major histocompatibility complex, class II, DQ alpha 1 acts_upstream_of_or_within
involved_in
ISO
IBA
(PMID:11027433), (PMID:11069069), (PMID:11714799), (PMID:7679955), (PMID:8598040), (PMID:8598041), (PMID:9432982), (PMID:9492004) MGI
GO_Central
PMID:7679955 PMID:8598040 PMID:8598041 PMID:9432982 PMID:9492004 More... GO_REF:0000033 NCBI chr 6:32,637,406...32,655,272
Ensembl chr 6:32,628,179...32,647,062
JBrowse link
G HLA-DQA2 major histocompatibility complex, class II, DQ alpha 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:32,741,391...32,747,198
Ensembl chr 6:32,741,391...32,747,198
JBrowse link
G HLA-DQB1 major histocompatibility complex, class II, DQ beta 1 involved_in
acts_upstream_of_or_within
IDA
IBA
ISO
(PMID:32341563)
(PMID:11027433), (PMID:11069069), (PMID:11714799), (PMID:7679955), (PMID:8598040), (PMID:8598041), (PMID:9432982), (PMID:9492004)
UniProt
GO_Central
MGI
PMID:7679955 PMID:8598040 PMID:8598041 PMID:9432982 PMID:9492004 More... GO_REF:0000033 NCBI chr 6:32,659,467...32,666,657
Ensembl chr 6:32,659,467...32,668,383
JBrowse link
G HLA-DQB2 major histocompatibility complex, class II, DQ beta 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:32,756,098...32,763,532
Ensembl chr 6:32,756,098...32,763,532
JBrowse link
G HLA-DRA major histocompatibility complex, class II, DR alpha involved_in
acts_upstream_of_or_within
IDA
IBA
ISO
(PMID:15265931)
(PMID:11027433), (PMID:11714799)
UniProt
GO_Central
MGI
PMID:11027433 PMID:11714799 PMID:15265931 GO_REF:0000033 NCBI chr 6:32,439,887...32,445,046
Ensembl chr 6:32,439,878...32,445,046
JBrowse link
G HLA-DRB1 major histocompatibility complex, class II, DR beta 1 involved_in
acts_upstream_of_or_within
IDA
IBA
ISO
(PMID:15265931), (PMID:32341563)
(PMID:11027433), (PMID:11714799)
UniProt
GO_Central
MGI
PMID:11027433 PMID:11714799 PMID:15265931 PMID:32341563 GO_REF:0000033 NCBI chr 6:32,578,775...32,589,848
Ensembl chr 6:32,577,902...32,589,848
JBrowse link
G HLA-DRB3 major histocompatibility complex, class II, DR beta 3 involved_in IDA
IBA
(PMID:19531622), (PMID:32341563) UniProt
GO_Central
PMID:19531622 PMID:32341563 GO_REF:0000033
G HLA-DRB4 major histocompatibility complex, class II, DR beta 4 involved_in IBA GO_Central GO_REF:0000033
G HLA-DRB5 major histocompatibility complex, class II, DR beta 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:32,517,353...32,530,287
Ensembl chr 6:32,517,353...32,530,287
JBrowse link
G IFI30 IFI30 lysosomal thiol reductase involved_in
acts_upstream_of_or_within
IEA
ISO
TAS
(PMID:11701933) Ensembl
MGI
Reactome
PMID:11701933 GO_REF:0000107 Reactome:R-HSA-2132295 NCBI chr19:18,173,813...18,178,117
Ensembl chr19:18,173,162...18,178,117
JBrowse link
G LGMN legumain involved_in TAS
IDA
(PMID:9872320) Reactome
UniProt
PMID:9872320 Reactome:R-HSA-2132295 NCBI chr14:92,703,809...92,748,627
Ensembl chr14:92,703,807...92,748,679
JBrowse link
G PIKFYVE phosphoinositide kinase, FYVE-type zinc finger containing involved_in IDA (PMID:30612035) UniProt PMID:30612035 NCBI chr 2:208,266,056...208,358,746
Ensembl chr 2:208,266,255...208,358,746
JBrowse link
G TRAF6 TNF receptor associated factor 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14499111) Ensembl
MGI
PMID:14499111 GO_REF:0000107 NCBI chr11:36,483,769...36,510,272
Ensembl chr11:36,483,769...36,510,272
JBrowse link
G UNC93B1 unc-93 homolog B1, TLR signaling regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16415873) Ensembl
MGI
PMID:16415873 GO_REF:0000107 NCBI chr11:67,991,100...68,004,097
Ensembl chr11:67,991,100...68,004,982
JBrowse link
antigen processing and presentation of exogenous protein antigen via MHC class Ib, TAP-dependent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2M beta-2-microglobulin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16299293) Ensembl
MGI
PMID:16299293 GO_REF:0000107 NCBI chr15:44,711,517...44,718,145
Ensembl chr15:44,711,358...44,718,851
JBrowse link
G HLA-G major histocompatibility complex, class I, G acts_upstream_of_or_within ISO (PMID:16299293) MGI PMID:16299293 NCBI chr 6:29,826,474...29,831,021
Ensembl chr 6:29,826,967...29,831,125
JBrowse link
G TAP2 transporter 2, ATP binding cassette subfamily B member involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16299293) Ensembl
MGI
PMID:16299293 GO_REF:0000107 NCBI chr 6:32,821,831...32,838,739
Ensembl chr 6:32,821,833...32,838,739
JBrowse link
antigen processing and presentation of peptide antigen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTSL cathepsin L involved_in ISS UniProt GO_REF:0000024 NCBI chr 9:87,726,119...87,731,469
Ensembl chr 9:87,724,051...87,731,469
JBrowse link
G CTSS cathepsin S involved_in IDA (PMID:8612130) CACAO PMID:8612130 NCBI chr 1:150,730,188...150,765,778
Ensembl chr 1:150,730,079...150,765,957
JBrowse link
G HLA-DQA1 major histocompatibility complex, class II, DQ alpha 1 acts_upstream_of_or_within ISO (PMID:11069069) MGI PMID:11069069 NCBI chr 6:32,637,406...32,655,272
Ensembl chr 6:32,628,179...32,647,062
JBrowse link
G HLA-DQB1 major histocompatibility complex, class II, DQ beta 1 acts_upstream_of_or_within ISO (PMID:11069069) MGI PMID:11069069 NCBI chr 6:32,659,467...32,666,657
Ensembl chr 6:32,659,467...32,668,383
JBrowse link
G SLC11A1 solute carrier family 11 member 1 involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
(PMID:17620357) BHF-UCL
MGI
Ensembl
PMID:17620357 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:218,382,273...218,396,894
Ensembl chr 2:218,382,029...218,396,894
JBrowse link
antigen processing and presentation of peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCB9 ATP binding cassette subfamily B member 9 NOT|involved_in IDA (PMID:17977821) UniProt PMID:17977821 NCBI chr12:122,918,610...122,975,114
Ensembl chr12:122,920,951...122,981,649
JBrowse link
G ACE angiotensin I converting enzyme involved_in TAS (PMID:23257181) BHF-UCL PMID:23257181 NCBI chr17:63,477,061...63,498,373
Ensembl chr17:63,477,061...63,498,380
JBrowse link
G B2M beta-2-microglobulin involved_in IEA UniProt GO_REF:0000043 NCBI chr15:44,711,517...44,718,145
Ensembl chr15:44,711,358...44,718,851
JBrowse link
G ERAP1 endoplasmic reticulum aminopeptidase 1 involved_in TAS Reactome Reactome:R-HSA-983169 NCBI chr 5:96,760,813...96,935,854
Ensembl chr 5:96,760,810...96,808,100
JBrowse link
G ERAP2 endoplasmic reticulum aminopeptidase 2 involved_in TAS Reactome Reactome:R-HSA-983169 NCBI chr 5:96,875,939...96,919,716
Ensembl chr 5:96,875,986...96,919,703
JBrowse link
G HFE homeostatic iron regulator NOT|involved_in IKR (PMID:8696333) BHF-UCL PMID:8696333 NCBI chr 6:26,087,429...26,098,343
Ensembl chr 6:26,087,226...26,098,343
JBrowse link
G HLA-A major histocompatibility complex, class I, A involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:29,942,532...29,945,870
Ensembl chr 6:29,941,260...29,949,572
JBrowse link
G HLA-B major histocompatibility complex, class I, B involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:31,353,875...31,357,179
Ensembl chr 6:31,353,872...31,367,067
JBrowse link
G HLA-C major histocompatibility complex, class I, C involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:31,268,749...31,272,092
Ensembl chr 6:31,268,749...31,272,130
JBrowse link
G HLA-DPB1 major histocompatibility complex, class II, DP beta 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:33,075,990...33,089,696
Ensembl chr 6:33,075,936...33,089,696
JBrowse link
G HLA-DQB1 major histocompatibility complex, class II, DQ beta 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:32,659,467...32,666,657
Ensembl chr 6:32,659,467...32,668,383
JBrowse link
G HLA-E major histocompatibility complex, class I, E involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:30,489,509...30,494,194
Ensembl chr 6:30,489,509...30,494,194
JBrowse link
G HLA-F major histocompatibility complex, class I, F involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:29,723,434...29,738,532
Ensembl chr 6:29,722,775...29,738,528
JBrowse link
G HLA-G major histocompatibility complex, class I, G involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:29,826,474...29,831,021
Ensembl chr 6:29,826,967...29,831,125
JBrowse link
G HLA-H major histocompatibility complex, class I, H (pseudogene) involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:29,887,573...29,891,079
Ensembl chr 6:29,887,752...29,890,482
Ensembl chr 6:29,887,752...29,890,482
JBrowse link
G HLA-L major histocompatibility complex, class I, L (pseudogene) involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:30,259,562...30,266,951
Ensembl chr 6:30,259,625...30,261,703
Ensembl chr 6:30,259,625...30,261,703
JBrowse link
G MR1 major histocompatibility complex, class I-related involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:181,033,387...181,061,938
Ensembl chr 1:181,033,374...181,061,938
JBrowse link
G SAR1B secretion associated Ras related GTPase 1B involved_in TAS Reactome Reactome:R-HSA-983169 NCBI chr 5:134,601,149...134,632,828
Ensembl chr 5:134,601,149...134,649,271
JBrowse link
antigen processing and presentation of peptide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MARCHF1 membrane associated ring-CH-type finger 1 involved_in IDA
IBA
(PMID:18389477) UniProt
GO_Central
PMID:18389477 GO_REF:0000033 NCBI chr 4:163,524,298...164,384,019
Ensembl chr 4:163,524,298...164,384,050
JBrowse link
G MARCHF8 membrane associated ring-CH-type finger 8 involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:45,454,585...45,594,907
Ensembl chr10:45,454,585...45,594,906
JBrowse link
antigen processing and presentation of peptide or polysaccharide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AL669918.1 novel protein, TAP2-HLA-DOB readthrough involved_in IEA UniProt GO_REF:0000043 Ensembl chr 6:32,813,767...32,838,822 JBrowse link
G HLA-A major histocompatibility complex, class I, A involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:29,942,532...29,945,870
Ensembl chr 6:29,941,260...29,949,572
JBrowse link
G HLA-B major histocompatibility complex, class I, B involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:31,353,875...31,357,179
Ensembl chr 6:31,353,872...31,367,067
JBrowse link
G HLA-DMA major histocompatibility complex, class II, DM alpha involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:32,948,618...32,953,097
Ensembl chr 6:32,948,613...32,969,094
JBrowse link
G HLA-DMB major histocompatibility complex, class II, DM beta involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:32,934,636...32,941,028
Ensembl chr 6:32,934,629...32,941,028
JBrowse link
G HLA-DOA major histocompatibility complex, class II, DO alpha involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:33,004,182...33,009,591
Ensembl chr 6:33,004,182...33,009,591
JBrowse link
G HLA-DOB major histocompatibility complex, class II, DO beta involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:32,812,763...32,817,002
Ensembl chr 6:32,812,763...32,820,466
JBrowse link
G HLA-DPA1 major histocompatibility complex, class II, DP alpha 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:33,064,569...33,080,748
Ensembl chr 6:33,064,569...33,080,775
JBrowse link
G HLA-DPB1 major histocompatibility complex, class II, DP beta 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:33,075,990...33,089,696
Ensembl chr 6:33,075,936...33,089,696
JBrowse link
G HLA-DQA1 major histocompatibility complex, class II, DQ alpha 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:32,637,406...32,655,272
Ensembl chr 6:32,628,179...32,647,062
JBrowse link
G HLA-DQA2 major histocompatibility complex, class II, DQ alpha 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:32,741,391...32,747,198
Ensembl chr 6:32,741,391...32,747,198
JBrowse link
G HLA-DQB1 major histocompatibility complex, class II, DQ beta 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:32,659,467...32,666,657
Ensembl chr 6:32,659,467...32,668,383
JBrowse link
G HLA-DQB2 major histocompatibility complex, class II, DQ beta 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:32,756,098...32,763,532
Ensembl chr 6:32,756,098...32,763,532
JBrowse link
G HLA-DQB3 major histocompatibility complex, class II, DQ beta 3 involved_in IEA UniProt GO_REF:0000043 Ensembl chr 6:32,730,758...32,731,695 JBrowse link
G HLA-DRA major histocompatibility complex, class II, DR alpha involved_in IEA
IDA
(PMID:21502329) UniProt PMID:21502329 GO_REF:0000043 NCBI chr 6:32,439,887...32,445,046
Ensembl chr 6:32,439,878...32,445,046
JBrowse link
G HLA-DRB1 major histocompatibility complex, class II, DR beta 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:32,578,775...32,589,848
Ensembl chr 6:32,577,902...32,589,848
JBrowse link
G HLA-DRB2 major histocompatibility complex, class II, DR beta 2 (pseudogene) involved_in IEA UniProt GO_REF:0000043
G HLA-DRB3 major histocompatibility complex, class II, DR beta 3 involved_in IEA UniProt GO_REF:0000043
G HLA-DRB4 major histocompatibility complex, class II, DR beta 4 involved_in IEA UniProt GO_REF:0000043
G HLA-DRB5 major histocompatibility complex, class II, DR beta 5 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:32,517,353...32,530,287
Ensembl chr 6:32,517,353...32,530,287
JBrowse link
antigen processing and presentation of polysaccharide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARL8B ARF like GTPase 8B involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 3:5,122,292...5,180,911
Ensembl chr 3:5,122,249...5,180,911
JBrowse link
antigen processing and presentation, endogenous lipid antigen via MHC class Ib term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD1A CD1a molecule involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:158,248,336...158,258,269
Ensembl chr 1:158,254,424...158,258,269
JBrowse link
G CD1B CD1b molecule involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:158,285,405...158,331,531
Ensembl chr 1:158,327,951...158,331,531
JBrowse link
G CD1C CD1c molecule involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:158,289,923...158,294,774
Ensembl chr 1:158,289,923...158,294,774
JBrowse link
G CD1D CD1d molecule involved_in IDA
IBA
(PMID:10523605) UniProt
GO_Central
PMID:10523605 GO_REF:0000033 NCBI chr 1:158,178,030...158,186,427
Ensembl chr 1:158,178,030...158,186,427
JBrowse link
G CD1E CD1e molecule involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:158,353,894...158,357,553
Ensembl chr 1:158,353,696...158,357,553
JBrowse link
antigen processing and presentation, exogenous lipid antigen via MHC class Ib term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AP3B1 adaptor related protein complex 3 subunit beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14557411) Ensembl
MGI
PMID:14557411 GO_REF:0000107 NCBI chr 5:78,000,522...78,294,698
Ensembl chr 5:77,991,640...78,294,762
JBrowse link
G AP3D1 adaptor related protein complex 3 subunit delta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14557411) Ensembl
MGI
PMID:14557411 GO_REF:0000107 NCBI chr19:2,100,988...2,164,616
Ensembl chr19:2,100,988...2,164,468
JBrowse link
G CD1A CD1a molecule involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:158,248,336...158,258,269
Ensembl chr 1:158,254,424...158,258,269
JBrowse link
G CD1B CD1b molecule involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:158,285,405...158,331,531
Ensembl chr 1:158,327,951...158,331,531
JBrowse link
G CD1C CD1c molecule involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:158,289,923...158,294,774
Ensembl chr 1:158,289,923...158,294,774
JBrowse link
G CD1D CD1d molecule involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:14557411) GO_Central
MGI
PMID:14557411 GO_REF:0000033 NCBI chr 1:158,178,030...158,186,427
Ensembl chr 1:158,178,030...158,186,427
JBrowse link
G CD1E CD1e molecule involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:158,353,894...158,357,553
Ensembl chr 1:158,353,696...158,357,553
JBrowse link
B cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FCER2 Fc epsilon receptor II involved_in IDA (PMID:2167225) UniProt PMID:2167225 NCBI chr19:7,688,776...7,702,131
Ensembl chr19:7,688,758...7,702,146
JBrowse link
G IGHE immunoglobulin heavy constant epsilon involved_in IDA (PMID:2167225) UniProt PMID:2167225 NCBI chr14:105,600,066...105,601,727
Ensembl chr14:105,597,691...105,601,728
JBrowse link
dendritic cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FCGR3A Fc gamma receptor IIIa involved_in ISO (PMID:28389502) UniProt PMID:28389502 NCBI chr 1:161,541,759...161,550,737
Ensembl chr 1:161,541,759...161,550,968
JBrowse link
G MPEG1 macrophage expressed 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr11:59,208,510...59,212,927
Ensembl chr11:59,208,510...59,212,927
JBrowse link
G WASHC1 WASH complex subunit 1 involved_in ISO (PMID:24886983) UniProt PMID:24886983 NCBI chr 9:14,513...30,487
Ensembl chr 9:14,475...73,865
JBrowse link
myeloid dendritic cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HLA-DRA major histocompatibility complex, class II, DR alpha involved_in IDA (PMID:29884618) UniProt PMID:29884618 NCBI chr 6:32,439,887...32,445,046
Ensembl chr 6:32,439,878...32,445,046
JBrowse link
G HLA-DRB1 major histocompatibility complex, class II, DR beta 1 involved_in IDA (PMID:29884618), (PMID:30282837) UniProt PMID:29884618 PMID:30282837 NCBI chr 6:32,578,775...32,589,848
Ensembl chr 6:32,577,902...32,589,848
JBrowse link
G HLA-DRB3 major histocompatibility complex, class II, DR beta 3 involved_in IDA (PMID:19531622), (PMID:30282837) UniProt PMID:19531622 PMID:30282837
negative regulation of antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LILRB2 leukocyte immunoglobulin like receptor B2 involved_in IDA (PMID:19124746) BHF-UCL PMID:19124746 NCBI chr19:54,273,812...54,281,110
Ensembl chr19:54,273,812...54,281,184
JBrowse link
negative regulation of antigen processing and presentation of endogenous peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HFE homeostatic iron regulator involved_in IGI (PMID:24643698) BHF-UCL PMID:24643698 NCBI chr 6:26,087,429...26,098,343
Ensembl chr 6:26,087,226...26,098,343
JBrowse link
negative regulation of antigen processing and presentation of peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TAPBPL TAP binding protein like involved_in IDA (PMID:23401559) UniProt PMID:23401559 NCBI chr12:6,451,649...6,472,006
Ensembl chr12:6,451,690...6,466,517
JBrowse link
negative regulation of antigen processing and presentation of peptide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HLA-DOA major histocompatibility complex, class II, DO alpha involved_in IDA (PMID:22733780) UniProt PMID:22733780 NCBI chr 6:33,004,182...33,009,591
Ensembl chr 6:33,004,182...33,009,591
JBrowse link
G HLA-DOB major histocompatibility complex, class II, DO beta involved_in IDA (PMID:22733780) UniProt PMID:22733780 NCBI chr 6:32,812,763...32,817,002
Ensembl chr 6:32,812,763...32,820,466
JBrowse link
negative regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G THBS1 thrombospondin 1 involved_in IDA (PMID:16882710) BHF-UCL PMID:16882710 NCBI chr15:39,581,079...39,599,466
Ensembl chr15:39,581,079...39,599,466
JBrowse link
negative regulation of dendritic cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD68 CD68 molecule involved_in ISS ARUK-UCL GO_REF:0000024 NCBI chr17:7,579,638...7,582,111
Ensembl chr17:7,579,491...7,582,111
JBrowse link
G FCGR2B Fc gamma receptor IIb involved_in TAS (PMID:26683154) ARUK-UCL PMID:26683154 NCBI chr 1:161,647,243...161,678,654
Ensembl chr 1:161,663,143...161,678,654
JBrowse link
G FGL2 fibrinogen like 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:29341118) Ensembl
MGI
PMID:29341118 GO_REF:0000107 NCBI chr 7:77,193,369...77,199,819
Ensembl chr 7:77,193,369...77,199,848
JBrowse link
G MIR155HG MIR155 host gene involved_in IDA (PMID:32671205) UniProt PMID:32671205 NCBI chr21:25,562,145...25,575,168
Ensembl chr21:25,560,592...25,575,168
JBrowse link
G THBS1 thrombospondin 1 involved_in IDA (PMID:16882710) BHF-UCL PMID:16882710 NCBI chr15:39,581,079...39,599,466
Ensembl chr15:39,581,079...39,599,466
JBrowse link
negative regulation of macrophage antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGL2 fibrinogen like 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:29341118) Ensembl
MGI
PMID:29341118 GO_REF:0000107 NCBI chr 7:77,193,369...77,199,819
Ensembl chr 7:77,193,369...77,199,848
JBrowse link
peptide antigen assembly with MHC class I protein complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2M beta-2-microglobulin involved_in IDA (PMID:36104323) UniProt PMID:36104323 NCBI chr15:44,711,517...44,718,145
Ensembl chr15:44,711,358...44,718,851
JBrowse link
G CALR calreticulin involved_in IEA
IDA
ISS
(PMID:35948544)
(PMID:11825569)
Ensembl
UniProt
BHF-UCL
PMID:11825569 PMID:35948544 GO_REF:0000107 NCBI chr19:12,938,609...12,944,489
Ensembl chr19:12,938,578...12,944,489
JBrowse link
G HLA-A major histocompatibility complex, class I, A involved_in IDA (PMID:36104323) UniProt PMID:36104323 NCBI chr 6:29,942,532...29,945,870
Ensembl chr 6:29,941,260...29,949,572
JBrowse link
G PDIA3 protein disulfide isomerase family A member 3 involved_in IDA (PMID:17603487) ComplexPortal PMID:17603487 NCBI chr15:43,746,438...43,773,278
Ensembl chr15:43,746,394...43,773,279
JBrowse link
G TAPBP TAP binding protein involved_in IDA
IBA
(PMID:10636848), (PMID:17603487) ComplexPortal
GO_Central
PMID:10636848 PMID:17603487 GO_REF:0000033 NCBI chr 6:33,299,694...33,314,078
Ensembl chr 6:33,299,694...33,314,284
JBrowse link
G TAPBPL TAP binding protein like involved_in IDA
IBA
(PMID:26869717) UniProt
GO_Central
PMID:26869717 GO_REF:0000033 NCBI chr12:6,451,649...6,472,006
Ensembl chr12:6,451,690...6,466,517
JBrowse link
peptide antigen assembly with MHC class II protein complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2M beta-2-microglobulin involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:44,711,517...44,718,145
Ensembl chr15:44,711,358...44,718,851
JBrowse link
G HLA-DMA major histocompatibility complex, class II, DM alpha involved_in IDA
IBA
(PMID:22733780), (PMID:23260142), (PMID:7606781), (PMID:9075930) UniProt
GO_Central
PMID:7606781 PMID:9075930 PMID:22733780 PMID:23260142 GO_REF:0000033 NCBI chr 6:32,948,618...32,953,097
Ensembl chr 6:32,948,613...32,969,094
JBrowse link
G HLA-DMB major histocompatibility complex, class II, DM beta involved_in IDA
IBA
(PMID:22733780), (PMID:23260142), (PMID:7606781), (PMID:9075930) UniProt
GO_Central
PMID:7606781 PMID:9075930 PMID:22733780 PMID:23260142 GO_REF:0000033 NCBI chr 6:32,934,636...32,941,028
Ensembl chr 6:32,934,629...32,941,028
JBrowse link
G HLA-DOA major histocompatibility complex, class II, DO alpha involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:33,004,182...33,009,591
Ensembl chr 6:33,004,182...33,009,591
JBrowse link
G HLA-DOB major histocompatibility complex, class II, DO beta involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:32,812,763...32,817,002
Ensembl chr 6:32,812,763...32,820,466
JBrowse link
G HLA-DPA1 major histocompatibility complex, class II, DP alpha 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:33,064,569...33,080,748
Ensembl chr 6:33,064,569...33,080,775
JBrowse link
G HLA-DPB1 major histocompatibility complex, class II, DP beta 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:33,075,990...33,089,696
Ensembl chr 6:33,075,936...33,089,696
JBrowse link
G HLA-DQA1 major histocompatibility complex, class II, DQ alpha 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:32,637,406...32,655,272
Ensembl chr 6:32,628,179...32,647,062
JBrowse link
G HLA-DQA2 major histocompatibility complex, class II, DQ alpha 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:32,741,391...32,747,198
Ensembl chr 6:32,741,391...32,747,198
JBrowse link
G HLA-DQB1 major histocompatibility complex, class II, DQ beta 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:32,659,467...32,666,657
Ensembl chr 6:32,659,467...32,668,383
JBrowse link
G HLA-DQB2 major histocompatibility complex, class II, DQ beta 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:32,756,098...32,763,532
Ensembl chr 6:32,756,098...32,763,532
JBrowse link
G HLA-DRA major histocompatibility complex, class II, DR alpha involved_in IDA
IBA
(PMID:1448172), (PMID:22733780), (PMID:7606781) UniProt
GO_Central
PMID:1448172 PMID:7606781 PMID:22733780 GO_REF:0000033 NCBI chr 6:32,439,887...32,445,046
Ensembl chr 6:32,439,878...32,445,046
JBrowse link
G HLA-DRB1 major histocompatibility complex, class II, DR beta 1 involved_in IDA
IBA
(PMID:1448172), (PMID:22733780), (PMID:7606781) UniProt
GO_Central
PMID:1448172 PMID:7606781 PMID:22733780 GO_REF:0000033 NCBI chr 6:32,578,775...32,589,848
Ensembl chr 6:32,577,902...32,589,848
JBrowse link
G HLA-DRB3 major histocompatibility complex, class II, DR beta 3 involved_in IBA GO_Central GO_REF:0000033
G HLA-DRB4 major histocompatibility complex, class II, DR beta 4 involved_in IBA GO_Central GO_REF:0000033
G HLA-DRB5 major histocompatibility complex, class II, DR beta 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:32,517,353...32,530,287
Ensembl chr 6:32,517,353...32,530,287
JBrowse link
peptide antigen stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TAPBP TAP binding protein involved_in ISS UniProt GO_REF:0000024 NCBI chr 6:33,299,694...33,314,078
Ensembl chr 6:33,299,694...33,314,284
JBrowse link
peptide antigen transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD209 CD209 molecule involved_in NAS (PMID:11337487) UniProt PMID:11337487 NCBI chr19:7,739,993...7,747,534
Ensembl chr19:7,739,993...7,747,564
JBrowse link
G CLEC4M C-type lectin domain family 4 member M involved_in NAS (PMID:11337487) UniProt PMID:11337487 NCBI chr19:7,763,243...7,769,605
Ensembl chr19:7,763,210...7,769,605
JBrowse link
G TAP2 transporter 2, ATP binding cassette subfamily B member involved_in IDA
IMP
(PMID:8496691)
(PMID:1538751)
UniProt PMID:1538751 PMID:8496691 NCBI chr 6:32,821,831...32,838,739
Ensembl chr 6:32,821,833...32,838,739
JBrowse link
plasmacytoid dendritic cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLEC4A C-type lectin domain family 4 member A involved_in IDA (PMID:18258799), (PMID:20530286) UniProt PMID:18258799 PMID:20530286 NCBI chr12:8,102,907...8,138,607
Ensembl chr12:8,123,617...8,138,607
JBrowse link
positive regulation of antigen processing and presentation of peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TAP2 transporter 2, ATP binding cassette subfamily B member ISO RGD PMID:1758495 RGD:1299069 NCBI chr 6:32,821,831...32,838,739
Ensembl chr 6:32,821,833...32,838,739
JBrowse link
positive regulation of antigen processing and presentation of peptide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PYCARD PYD and CARD domain containing involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr16:31,201,486...31,202,760
Ensembl chr16:31,201,486...31,203,450
JBrowse link
G TREM2 triggering receptor expressed on myeloid cells 2 involved_in IDA (PMID:11602640) BHF-UCL PMID:11602640 NCBI chr 6:41,158,508...41,163,116
Ensembl chr 6:41,158,506...41,163,186
JBrowse link
positive regulation of dendritic cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCL19 C-C motif chemokine ligand 19 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 9:34,689,570...34,691,276
Ensembl chr 9:34,689,570...34,691,276
JBrowse link
G CCL21 C-C motif chemokine ligand 21 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 9:34,709,005...34,710,136
Ensembl chr 9:34,709,005...34,710,136
JBrowse link
G CCR7 C-C motif chemokine receptor 7 involved_in IEA
ISS
Ensembl
BHF-UCL
GO_REF:0000024 GO_REF:0000107 NCBI chr17:40,553,769...40,565,472
Ensembl chr17:40,551,081...40,565,472
JBrowse link
G CD74 CD74 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:150,401,639...150,412,910
Ensembl chr 5:150,401,637...150,412,969
JBrowse link
G NOD1 nucleotide binding oligomerization domain containing 1 involved_in IEA
ISS
Ensembl
BHF-UCL
GO_REF:0000024 GO_REF:0000107 NCBI chr 7:30,424,527...30,478,784
Ensembl chr 7:30,424,527...30,478,784
JBrowse link
G NOD2 nucleotide binding oligomerization domain containing 2 involved_in ISS
IEA
BHF-UCL
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr16:50,693,606...50,733,075
Ensembl chr16:50,693,588...50,733,077
JBrowse link
G SLC11A1 solute carrier family 11 member 1 involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
(PMID:18984740) BHF-UCL
MGI
Ensembl
PMID:18984740 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:218,382,273...218,396,894
Ensembl chr 2:218,382,029...218,396,894
JBrowse link
positive regulation of macrophage antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FAM3D FAM3 metabolism regulating signaling molecule D acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:29853563) MGI
Ensembl
PMID:29853563 GO_REF:0000107 NCBI chr 3:58,633,946...58,666,774
Ensembl chr 3:58,633,946...58,666,834
JBrowse link
regulation of antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CST7 cystatin F acts_upstream_of IDA (PMID:22365146) ARUK-UCL PMID:22365146 NCBI chr20:24,949,269...24,959,928
Ensembl chr20:24,949,269...24,959,928
JBrowse link
G CTSS cathepsin S involved_in IDA (PMID:22365146) ARUK-UCL PMID:22365146 NCBI chr 1:150,730,188...150,765,778
Ensembl chr 1:150,730,079...150,765,957
JBrowse link
G PTPN22 protein tyrosine phosphatase non-receptor type 22 NOT|involved_in ISO (PMID:23871208) UniProt PMID:23871208 NCBI chr 1:113,813,811...113,871,759
Ensembl chr 1:113,813,811...113,871,753
JBrowse link
G YTHDF1 YTH N6-methyladenosine RNA binding protein F1 involved_in ISS UniProt GO_REF:0000024 NCBI chr20:63,195,429...63,216,131
Ensembl chr20:63,195,429...63,216,139
JBrowse link
regulation of B cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FCGR2B Fc gamma receptor IIb involved_in TAS (PMID:26683154) ARUK-UCL PMID:26683154 NCBI chr 1:161,647,243...161,678,654
Ensembl chr 1:161,663,143...161,678,654
JBrowse link
regulation of T cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WAS WASP actin nucleation promoting factor involved_in IMP (PMID:22804504) CACAO PMID:22804504 NCBI chr  X:48,676,636...48,691,427
Ensembl chr  X:48,676,596...48,691,431
JBrowse link
T cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ICAM1 intercellular adhesion molecule 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:2479693) Ensembl
MGI
PMID:2479693 GO_REF:0000107 NCBI chr19:10,271,120...10,286,615
Ensembl chr19:10,271,093...10,286,615
JBrowse link
G KDM5D lysine demethylase 5D involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16301625) Ensembl
MGI
PMID:16301625 GO_REF:0000107 NCBI chr  Y:19,703,865...19,744,726
Ensembl chr  Y:19,703,865...19,744,939
JBrowse link
G RFTN1 raftlin, lipid raft linker 1 involved_in ISS
IEA
CAFA
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 3:16,315,845...16,513,699
Ensembl chr 3:16,313,574...16,514,026
JBrowse link
G TREML4 triggering receptor expressed on myeloid cells like 4 acts_upstream_of_or_within ISO (PMID:22210914) MGI PMID:22210914 NCBI chr 6:41,228,349...41,238,882
Ensembl chr 6:41,228,339...41,238,882
JBrowse link
G TREX1 three prime repair exonuclease 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24218451) Ensembl
MGI
PMID:24218451 GO_REF:0000107 NCBI chr 3:48,465,830...48,467,645
Ensembl chr 3:48,465,811...48,467,645
JBrowse link
G UNC93B1 unc-93 homolog B1, TLR signaling regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16415873) Ensembl
MGI
PMID:16415873 GO_REF:0000107 NCBI chr11:67,991,100...68,004,097
Ensembl chr11:67,991,100...68,004,982
JBrowse link

Term paths to the root