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ONTOLOGY REPORT - ANNOTATIONS


Term:antigen processing and presentation
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Accession:GO:0019882 term browser browse the term
Definition:The process in which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex.
Synonyms:exact_synonym: antigen presentation;   antigen processing
 alt_id: GO:0030333
 xref: Wikipedia:Antigen_presentation


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antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AP3B1 adaptor related protein complex 3 subunit beta 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:14557411) MGI
Ensembl
PMID:14557411 GO_REF:0000107 NCBI chr 4:72,225,658...72,524,971
Ensembl chr 4:72,225,599...72,524,933
JBrowse link
G AP3D1 adaptor related protein complex 3 subunit delta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14557411) Ensembl
MGI
PMID:14557411 GO_REF:0000107 NCBI chr 6:1,901,669...1,951,352
Ensembl chr 6:1,901,507...1,951,314
JBrowse link
G CD1D CD1d molecule acts_upstream_of_or_within ISO (PMID:11754812) MGI PMID:11754812 NCBI chr20:5,726,307...5,733,355
Ensembl chr20:5,727,049...5,730,061
JBrowse link
G CD74 CD74 molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9432982)
(PMID:11754812), (PMID:3864916), (PMID:7985028)
InterPro
Ensembl
TreeGrafter
MGI
PMID:3864916 PMID:7985028 PMID:9432982 PMID:11754812 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr23:53,008,802...53,022,953
Ensembl chr23:53,009,394...53,022,923
JBrowse link
G EXT1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO (PMID:23733868) MGI PMID:23733868 NCBI chr 8:112,435,733...112,751,301 JBrowse link
G EXT1 exostosin glycosyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 8:112,436,088...112,474,443 JBrowse link
G FLT3 fms related receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (PMID:20457904) MGI PMID:20457904 NCBI chr 3:7,117,579...7,222,600
Ensembl chr 3:7,116,947...7,222,849
JBrowse link
G GBA1 glucosylceramidase beta 1 acts_upstream_of_or_within ISO (PMID:22665763) MGI PMID:22665763 NCBI chr20:8,598,110...8,631,517
Ensembl chr20:8,598,628...8,630,990
JBrowse link
G IFNG interferon gamma acts_upstream_of_or_within ISO (PMID:15356141) MGI PMID:15356141 NCBI chr11:63,785,493...63,791,071
Ensembl chr11:63,786,041...63,790,473
JBrowse link
G LOC103221700 HLA class II histocompatibility antigen, DR beta 3 chain involved_in IEA InterPro GO_REF:0000002 NCBI chr17:39,471,058...39,484,265 JBrowse link
G LOC103221771 class I histocompatibility antigen, Gogo-B*0101 alpha chain-like involved_in IEA InterPro GO_REF:0000002 NCBI chr17:41,184,309...41,187,696 JBrowse link
G LOC103221775 patr class I histocompatibility antigen, B-2 alpha chain involved_in IEA InterPro GO_REF:0000002 NCBI chr17:41,028,313...41,032,381 JBrowse link
G LOC103221781 class I histocompatibility antigen, Gogo-B*0101 alpha chain-like involved_in IEA InterPro GO_REF:0000002 NCBI chr17:40,916,562...40,919,866 JBrowse link
G LOC103221786 class I histocompatibility antigen, Gogo-B*0101 alpha chain involved_in IEA InterPro GO_REF:0000002 NCBI chr17:40,758,558...40,761,905 JBrowse link
G LOC103221837 popy class I histocompatibility antigen, alpha chain E involved_in IEA InterPro GO_REF:0000002 NCBI chr17:41,940,842...42,692,045
Ensembl chr17:41,941,869...41,946,176
JBrowse link
G LOC103247136 HLA class II histocompatibility antigen, DP alpha 1 chain involved_in IEA InterPro GO_REF:0000002
G LOC103247138 HLA class II histocompatibility antigen, DP beta 1 chain-like involved_in IEA InterPro GO_REF:0000002 NCBI chr17:38,949,347...38,964,673 JBrowse link
G LOC103247140 HLA class I histocompatibility antigen, A-11 alpha chain involved_in IEA InterPro GO_REF:0000002
G LOC103247147 HLA class I histocompatibility antigen, B alpha chain-like involved_in IEA InterPro GO_REF:0000002
G LOC103247148 HLA class II histocompatibility antigen, DRB1 beta chain involved_in IEA InterPro GO_REF:0000002 NCBI chr17:39,556,020...39,564,488 JBrowse link
G LOC119618083 HLA class II histocompatibility antigen, DRB1 beta chain-like involved_in IEA InterPro GO_REF:0000002
G LOC119618283 patr class I histocompatibility antigen, alpha chain E involved_in IEA InterPro GO_REF:0000002
G LOC119623226 HLA class I histocompatibility antigen, B alpha chain-like involved_in IEA InterPro GO_REF:0000002
G LOC119623524 class I histocompatibility antigen, Gogo-B*0103 alpha chain-like involved_in IEA InterPro GO_REF:0000002
G LOC119623630 lysosomal acid glucosylceramidase involved_in IEA Ensembl GO_REF:0000107
G MHC-DMA HLA class II histocompatibility antigen, DM alpha chain involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9432982)
(PMID:11148202), (PMID:7584146), (PMID:7985028)
InterPro
MGI
PMID:7584146 PMID:7985028 PMID:9432982 PMID:11148202 GO_REF:0000002 NCBI chr17:39,142,340...39,151,804
Ensembl chr17:39,142,395...39,146,252
JBrowse link
G MHC-DMB major histocompatibility complex, class II, DM beta involved_in IEA InterPro GO_REF:0000002 NCBI chr17:39,153,744...39,161,029
Ensembl chr17:39,154,850...39,161,090
JBrowse link
G MHC-DOA major histocompatibility complex, class II, DO alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11069069) InterPro
Ensembl
MGI
PMID:11069069 GO_REF:0000002 GO_REF:0000107 NCBI chr17:39,084,785...39,090,477
Ensembl chr17:39,085,080...39,090,474
JBrowse link
G MHC-DOB major histocompatibility complex, class II, DO beta involved_in IEA InterPro GO_REF:0000002 NCBI chr17:39,295,768...39,300,032
Ensembl chr17:39,295,828...39,300,819
JBrowse link
G MHC-DPA1 major histocompatibility complex, class II, DP alpha 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr17:39,009,361...39,017,978 JBrowse link
G MHC-DPB1 major histocompatibility complex, class II, DP beta 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr17:38,996,329...39,007,097 JBrowse link
G MHC-DQA1 major histocompatibility complex, class II, DQ alpha 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9432982) InterPro
MGI
PMID:9432982 GO_REF:0000002 NCBI chr17:39,422,445...39,428,777
Ensembl chr17:39,420,134...39,428,871
JBrowse link
G MHC-DQB1 major histocompatibility complex, class II, DQ beta 1 involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr17:39,406,811...39,413,626
Ensembl chr17:39,406,762...39,413,277
JBrowse link
G MHC-DRA major histocompatibility complex, class II, DR alpha involved_in IEA InterPro GO_REF:0000002 NCBI chr17:39,623,324...39,628,464
Ensembl chr17:39,622,402...39,629,261
JBrowse link
G PSAP prosaposin acts_upstream_of_or_within ISO (PMID:14684827) MGI PMID:14684827 NCBI chr 9:59,440,327...59,474,773
Ensembl chr 9:59,440,311...59,474,986
JBrowse link
G PSMB8 proteasome 20S subunit beta 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15356141) Ensembl
MGI
PMID:15356141 GO_REF:0000107 NCBI chr17:39,260,774...39,264,990
Ensembl chr17:39,260,511...39,265,166
JBrowse link
G PSMB9 proteasome 20S subunit beta 9 acts_upstream_of_or_within ISO (PMID:15356141) MGI PMID:15356141 NCBI chr17:39,246,356...39,251,852
Ensembl chr17:39,245,854...39,251,842
JBrowse link
G RAB10 RAB10, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:81,508,800...81,618,172
Ensembl chr14:81,507,031...81,617,983
JBrowse link
G RAB27A RAB27A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:28,140,972...28,227,847
Ensembl chr26:28,197,464...28,227,963
JBrowse link
G RAB32 RAB32, member RAS oncogene family involved_in ISO (PMID:19717423) UniProt PMID:19717423 NCBI chr13:25,265,831...25,281,106 JBrowse link
G RAB33A RAB33A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:105,421,709...105,437,206
Ensembl chr  X:105,424,290...105,437,169
JBrowse link
G RAB34 RAB34, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:22,482,012...22,486,159
Ensembl chr16:22,481,747...22,485,186
JBrowse link
G RAB35 RAB35, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:115,447,483...115,468,964
Ensembl chr11:115,447,489...115,468,941
JBrowse link
G RAB3B RAB3B, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:80,963,320...81,036,058
Ensembl chr20:80,963,398...81,035,657
JBrowse link
G RAB3C RAB3C, member RAS oncogene family involved_in ISO (PMID:19717423) UniProt PMID:19717423 NCBI chr 4:54,741,211...55,028,023 JBrowse link
G RAB3C RAB3C, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 4:54,742,185...55,024,515 JBrowse link
G RAB4A RAB4A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:66,540,462...66,574,729
Ensembl chr25:66,540,549...66,572,173
JBrowse link
G RAB5B RAB5B, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:51,912,417...51,933,862
Ensembl chr11:51,926,016...51,931,356
JBrowse link
G RAB6A RAB6A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:64,923,071...65,020,279
Ensembl chr 1:64,922,496...65,020,207
JBrowse link
G RAB8B RAB8B, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:20,275,555...20,354,298
Ensembl chr26:20,275,258...20,354,202
JBrowse link
G RELB RELB proto-oncogene, NF-kB subunit acts_upstream_of_or_within ISO (PMID:7845467) MGI PMID:7845467 NCBI chr 6:38,463,414...38,500,487 JBrowse link
G RELB RELB proto-oncogene, NF-kB subunit involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 6:38,464,860...38,500,591 JBrowse link
G UNC93B1 unc-93 homolog B1, TLR signaling regulator acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:20457904) MGI
Ensembl
PMID:20457904 GO_REF:0000107 NCBI chr 1:6,537,198...6,549,457
Ensembl chr 1:6,537,273...6,549,450
JBrowse link
G WDFY4 WDFY family member 4 acts_upstream_of_or_within ISO (PMID:30409884) MGI PMID:30409884 NCBI chr 9:42,814,606...43,111,161 JBrowse link
G WDFY4 WDFY family member 4 involved_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 Ensembl chr 9:42,895,646...43,085,270 JBrowse link
antigen processing and presentation following phagocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARL8B ARF like GTPase 8B involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:41,192,458...41,247,048
Ensembl chr22:41,192,484...41,244,822
JBrowse link
antigen processing and presentation of endogenous antigen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG5 autophagy related 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23382543) MGI
Ensembl
PMID:23382543 GO_REF:0000107 NCBI chr13:67,482,538...67,619,201
Ensembl chr13:67,482,595...67,617,902
JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2M beta-2-microglobulin involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:38,331,818...38,338,785
Ensembl chr26:38,331,442...38,338,809
JBrowse link
G IDE insulin degrading enzyme involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:85,722,728...85,843,247
Ensembl chr 9:85,721,886...85,843,117
JBrowse link
G TAP1 transporter 1, ATP binding cassette subfamily B member involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,252,000...39,260,195 JBrowse link
G TAP2 transporter 2, ATP binding cassette subfamily B member acts_upstream_of_or_within
involved_in
ISO PMID:1758495
(PMID:1538751)
(PMID:8496691)
MGI
UniProt
PMID:1538751 PMID:1758495 PMID:8496691 RGD:1299069 NCBI chr17:39,266,870...39,277,658 JBrowse link
G TAPBP TAP binding protein involved_in IEA InterPro GO_REF:0000002 NCBI chr17:38,762,934...38,776,247
Ensembl chr17:38,763,206...38,773,768
JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-dependent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TAP2 transporter 2, ATP binding cassette subfamily B member acts_upstream_of_or_within ISO (PMID:1538753) MGI PMID:1538753 NCBI chr17:39,266,870...39,277,658 JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-independent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AZGP1 alpha-2-glycoprotein 1, zinc-binding involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr28:13,104,262...13,120,329
Ensembl chr28:13,104,323...13,120,363
JBrowse link
G LOC103221771 class I histocompatibility antigen, Gogo-B*0101 alpha chain-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:41,184,309...41,187,696 JBrowse link
G LOC103221775 patr class I histocompatibility antigen, B-2 alpha chain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:41,028,313...41,032,381 JBrowse link
G LOC103221779 patr class I histocompatibility antigen, B-2 alpha chain-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:40,969,072...40,972,438 JBrowse link
G LOC103221781 class I histocompatibility antigen, Gogo-B*0101 alpha chain-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:40,916,562...40,919,866 JBrowse link
G LOC103221786 class I histocompatibility antigen, Gogo-B*0101 alpha chain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:40,758,558...40,761,905 JBrowse link
G LOC103221837 popy class I histocompatibility antigen, alpha chain E involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:41,940,842...42,692,045
Ensembl chr17:41,941,869...41,946,176
JBrowse link
G LOC103221863 mamu class I histocompatibility antigen, alpha chain F involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:42,899,211...42,903,274 JBrowse link
G LOC103240135 UL16-binding protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr13:21,498,223...21,505,004 JBrowse link
G LOC103240138 UL16-binding protein 1-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr13:21,522,045...21,524,874 JBrowse link
G LOC103240141 UL16-binding protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr13:21,625,381...21,638,933
Ensembl chr13:21,629,092...21,636,623
JBrowse link
G LOC103240144 UL16-binding protein 2-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr13:21,651,944...21,659,099 JBrowse link
G LOC103247140 HLA class I histocompatibility antigen, A-11 alpha chain involved_in IEA TreeGrafter GO_REF:0000118
G LOC103247147 HLA class I histocompatibility antigen, B alpha chain-like involved_in IEA TreeGrafter GO_REF:0000118
G LOC119618283 patr class I histocompatibility antigen, alpha chain E involved_in IEA TreeGrafter GO_REF:0000118
G LOC119623226 HLA class I histocompatibility antigen, B alpha chain-like involved_in IEA TreeGrafter GO_REF:0000118
G LOC119623524 class I histocompatibility antigen, Gogo-B*0103 alpha chain-like involved_in IEA TreeGrafter GO_REF:0000118
G RAET1E retinoic acid early transcript 1E involved_in IEA TreeGrafter GO_REF:0000118 Ensembl chr13:21,738,263...21,740,910 JBrowse link
G RAET1G retinoic acid early transcript 1G involved_in IEA TreeGrafter GO_REF:0000118 Ensembl chr13:21,702,133...21,715,835 JBrowse link
G ULBP3 UL16 binding protein 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr13:77,468,549...77,491,049 JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class Ib term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AZGP1 alpha-2-glycoprotein 1, zinc-binding involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr28:13,104,262...13,120,329
Ensembl chr28:13,104,323...13,120,363
JBrowse link
G LOC103221771 class I histocompatibility antigen, Gogo-B*0101 alpha chain-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:41,184,309...41,187,696 JBrowse link
G LOC103221775 patr class I histocompatibility antigen, B-2 alpha chain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:41,028,313...41,032,381 JBrowse link
G LOC103221779 patr class I histocompatibility antigen, B-2 alpha chain-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:40,969,072...40,972,438 JBrowse link
G LOC103221781 class I histocompatibility antigen, Gogo-B*0101 alpha chain-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:40,916,562...40,919,866 JBrowse link
G LOC103221786 class I histocompatibility antigen, Gogo-B*0101 alpha chain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:40,758,558...40,761,905 JBrowse link
G LOC103221837 popy class I histocompatibility antigen, alpha chain E involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr17:41,940,842...42,692,045
Ensembl chr17:41,941,869...41,946,176
JBrowse link
G LOC103221863 mamu class I histocompatibility antigen, alpha chain F involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr17:42,899,211...42,903,274 JBrowse link
G LOC103240135 UL16-binding protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr13:21,498,223...21,505,004 JBrowse link
G LOC103240138 UL16-binding protein 1-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr13:21,522,045...21,524,874 JBrowse link
G LOC103240141 UL16-binding protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr13:21,625,381...21,638,933
Ensembl chr13:21,629,092...21,636,623
JBrowse link
G LOC103240144 UL16-binding protein 2-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr13:21,651,944...21,659,099 JBrowse link
G LOC103247140 HLA class I histocompatibility antigen, A-11 alpha chain involved_in IEA TreeGrafter GO_REF:0000118
G LOC103247147 HLA class I histocompatibility antigen, B alpha chain-like involved_in IEA TreeGrafter GO_REF:0000118
G LOC119618283 patr class I histocompatibility antigen, alpha chain E involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118
G LOC119623226 HLA class I histocompatibility antigen, B alpha chain-like involved_in IEA TreeGrafter GO_REF:0000118
G LOC119623524 class I histocompatibility antigen, Gogo-B*0103 alpha chain-like involved_in IEA TreeGrafter GO_REF:0000118
G RAET1E retinoic acid early transcript 1E involved_in IEA TreeGrafter GO_REF:0000118 Ensembl chr13:21,738,263...21,740,910 JBrowse link
G RAET1G retinoic acid early transcript 1G involved_in IEA TreeGrafter GO_REF:0000118 Ensembl chr13:21,702,133...21,715,835 JBrowse link
G ULBP3 UL16 binding protein 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr13:77,468,549...77,491,049 JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-dependent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TAP2 transporter 2, ATP binding cassette subfamily B member involved_in
acts_upstream_of_or_within
ISO (PMID:1538751)
(PMID:1538753)
UniProt
MGI
PMID:1538751 PMID:1538753 NCBI chr17:39,266,870...39,277,658 JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC103221700 HLA class II histocompatibility antigen, DR beta 3 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,471,058...39,484,265 JBrowse link
G LOC103247148 HLA class II histocompatibility antigen, DRB1 beta chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,556,020...39,564,488 JBrowse link
G LOC119618083 HLA class II histocompatibility antigen, DRB1 beta chain-like involved_in IEA Ensembl GO_REF:0000107
G MHC-DRA major histocompatibility complex, class II, DR alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,623,324...39,628,464
Ensembl chr17:39,622,402...39,629,261
JBrowse link
antigen processing and presentation of exogenous antigen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FCGR1A Fc fragment of IgG receptor Ia acts_upstream_of_or_within ISO (PMID:11911823) MGI PMID:11911823
G LOC103230489 major histocompatibility complex class I-related gene protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:48,348,439...48,370,242
Ensembl chr25:48,348,196...48,369,483
JBrowse link
G PSME1 proteasome activator subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15944286) Ensembl
MGI
PMID:15944286 GO_REF:0000107 NCBI chr24:1,122,086...1,124,907
Ensembl chr24:1,122,631...1,125,416
JBrowse link
G PSME2 proteasome activator subunit 2 acts_upstream_of_or_within ISO (PMID:15944286) MGI PMID:15944286 NCBI chr24:1,129,389...1,133,289
Ensembl chr24:1,129,419...1,132,596
JBrowse link
antigen processing and presentation of exogenous peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLEC4A C-type lectin domain family 4 member A involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:8,190,312...8,207,451
Ensembl chr11:8,190,370...8,207,438
JBrowse link
G FCER1G Fc fragment of IgE receptor Ig acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:11911824) MGI
TreeGrafter
PMID:11911824 GO_REF:0000118 NCBI chr20:2,763,412...2,767,774
Ensembl chr20:2,763,417...2,767,248
JBrowse link
G FCGR1A Fc fragment of IgG receptor Ia acts_upstream_of_or_within ISO (PMID:11911824) MGI PMID:11911824
G IFI30 IFI30 lysosomal thiol reductase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:16,644,361...16,649,599
Ensembl chr 6:16,644,392...16,649,751
JBrowse link
G MFSD6 major facilitator superfamily domain containing 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:17010536) MGI
TreeGrafter
PMID:17010536 GO_REF:0000118 NCBI chr10:75,915,656...76,002,556
Ensembl chr10:75,916,351...76,000,275
JBrowse link
antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TAPBP TAP binding protein acts_upstream_of_or_within
involved_in
ISO (PMID:9716645) MGI
UniProt
PMID:9716645 NCBI chr17:38,762,934...38,776,247
Ensembl chr17:38,763,206...38,773,768
JBrowse link
antigen processing and presentation of exogenous peptide antigen via MHC class Ib term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC103221837 popy class I histocompatibility antigen, alpha chain E involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:41,940,842...42,692,045
Ensembl chr17:41,941,869...41,946,176
JBrowse link
G LOC103221863 mamu class I histocompatibility antigen, alpha chain F involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:42,899,211...42,903,274 JBrowse link
G LOC119618283 patr class I histocompatibility antigen, alpha chain E involved_in IEA Ensembl GO_REF:0000107
antigen processing and presentation of exogenous peptide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD74 CD74 molecule acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:7679955), (PMID:8598040) MGI
Ensembl
PMID:7679955 PMID:8598040 GO_REF:0000107 NCBI chr23:53,008,802...53,022,953
Ensembl chr23:53,009,394...53,022,923
JBrowse link
G CTSE cathepsin E involved_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chr25:23,318,421...23,333,885
Ensembl chr25:23,319,248...23,332,980
JBrowse link
G CTSS cathepsin S involved_in IEA Ensembl GO_REF:0000107
G FCER1G Fc fragment of IgE receptor Ig acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:14643301) MGI
TreeGrafter
PMID:14643301 GO_REF:0000118 NCBI chr20:2,763,412...2,767,774
Ensembl chr20:2,763,417...2,767,248
JBrowse link
G IFI30 IFI30 lysosomal thiol reductase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:11701933) MGI
Ensembl
PMID:11701933 GO_REF:0000107 NCBI chr 6:16,644,361...16,649,599
Ensembl chr 6:16,644,392...16,649,751
JBrowse link
G LGMN legumain involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:70,456,463...70,500,345
Ensembl chr24:70,456,095...70,486,087
JBrowse link
G LOC103221700 HLA class II histocompatibility antigen, DR beta 3 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,471,058...39,484,265 JBrowse link
G LOC103223672 low affinity immunoglobulin gamma Fc region receptor II-b acts_upstream_of_or_within ISO (PMID:14643301) MGI PMID:14643301 NCBI chr20:2,398,425...2,413,328 JBrowse link
G LOC103247148 HLA class II histocompatibility antigen, DRB1 beta chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,556,020...39,564,488 JBrowse link
G LOC119618083 HLA class II histocompatibility antigen, DRB1 beta chain-like involved_in IEA Ensembl GO_REF:0000107
G MHC-DMA HLA class II histocompatibility antigen, DM alpha chain acts_upstream_of_or_within ISO (PMID:8598040)
(PMID:8598041)
(PMID:11027433)
(PMID:11714799)
MGI PMID:8598040 PMID:8598041 PMID:11027433 PMID:11714799 NCBI chr17:39,142,340...39,151,804
Ensembl chr17:39,142,395...39,146,252
JBrowse link
G MHC-DMB major histocompatibility complex, class II, DM beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,153,744...39,161,029
Ensembl chr17:39,154,850...39,161,090
JBrowse link
G MHC-DOA major histocompatibility complex, class II, DO alpha acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:9492004) MGI
Ensembl
PMID:9492004 GO_REF:0000107 NCBI chr17:39,084,785...39,090,477
Ensembl chr17:39,085,080...39,090,474
JBrowse link
G MHC-DPA1 major histocompatibility complex, class II, DP alpha 1 involved_in ISO (PMID:20356827) UniProt PMID:20356827 NCBI chr17:39,009,361...39,017,978 JBrowse link
G MHC-DPB1 major histocompatibility complex, class II, DP beta 1 involved_in ISO (PMID:20356827)
(PMID:32341563)
UniProt PMID:20356827 PMID:32341563 NCBI chr17:38,996,329...39,007,097 JBrowse link
G MHC-DQA1 major histocompatibility complex, class II, DQ alpha 1 acts_upstream_of_or_within ISO (PMID:11027433), (PMID:11069069), (PMID:11714799), (PMID:7679955), (PMID:8598040), (PMID:8598041), (PMID:9432982), (PMID:9492004) MGI PMID:7679955 PMID:8598040 PMID:8598041 PMID:9432982 PMID:9492004 More... NCBI chr17:39,422,445...39,428,777
Ensembl chr17:39,420,134...39,428,871
JBrowse link
G MHC-DQB1 major histocompatibility complex, class II, DQ beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,406,811...39,413,626
Ensembl chr17:39,406,762...39,413,277
JBrowse link
G MHC-DRA major histocompatibility complex, class II, DR alpha acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:11027433), (PMID:11714799) MGI
Ensembl
PMID:11027433 PMID:11714799 GO_REF:0000107 NCBI chr17:39,623,324...39,628,464
Ensembl chr17:39,622,402...39,629,261
JBrowse link
G PIKFYVE phosphoinositide kinase, FYVE-type zinc finger containing involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:94,051,096...94,144,968
Ensembl chr10:94,056,923...94,145,268
JBrowse link
G TRAF6 TNF receptor associated factor 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14499111) Ensembl
MGI
PMID:14499111 GO_REF:0000107 NCBI chr 1:28,726,357...28,752,389
Ensembl chr 1:28,734,380...28,747,092
JBrowse link
G UNC93B1 unc-93 homolog B1, TLR signaling regulator acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:16415873) MGI
Ensembl
PMID:16415873 GO_REF:0000107 NCBI chr 1:6,537,198...6,549,457
Ensembl chr 1:6,537,273...6,549,450
JBrowse link
antigen processing and presentation of exogenous protein antigen via MHC class Ib, TAP-dependent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2M beta-2-microglobulin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16299293) Ensembl
MGI
PMID:16299293 GO_REF:0000107 NCBI chr26:38,331,818...38,338,785
Ensembl chr26:38,331,442...38,338,809
JBrowse link
G TAP2 transporter 2, ATP binding cassette subfamily B member acts_upstream_of_or_within ISO (PMID:16299293) MGI PMID:16299293 NCBI chr17:39,266,870...39,277,658 JBrowse link
antigen processing and presentation of peptide antigen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTSL cathepsin L involved_in ISO (PMID:12021314), (PMID:9545226) UniProt PMID:9545226 PMID:12021314 NCBI chr12:98,347,770...98,353,426
Ensembl chr12:98,347,800...98,353,467
JBrowse link
G CTSS cathepsin S involved_in IEA Ensembl GO_REF:0000107
G MHC-DQA1 major histocompatibility complex, class II, DQ alpha 1 acts_upstream_of_or_within ISO (PMID:11069069) MGI PMID:11069069 NCBI chr17:39,422,445...39,428,777
Ensembl chr17:39,420,134...39,428,871
JBrowse link
G MHC-DQB1 major histocompatibility complex, class II, DQ beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,406,811...39,413,626
Ensembl chr17:39,406,762...39,413,277
JBrowse link
G SLC11A1 solute carrier family 11 member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17620357) Ensembl
MGI
PMID:17620357 GO_REF:0000107 NCBI chr10:104,276,553...104,288,466 JBrowse link
antigen processing and presentation of peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCB9 ATP binding cassette subfamily B member 9 NOT|involved_in ISO (PMID:17977821) UniProt PMID:17977821 NCBI chr11:118,269,654...118,308,703
Ensembl chr11:118,269,655...118,308,764
JBrowse link
G B2M beta-2-microglobulin involved_in IEA UniProt GO_REF:0000043 NCBI chr26:38,331,818...38,338,785
Ensembl chr26:38,331,442...38,338,809
JBrowse link
G LOC103221771 class I histocompatibility antigen, Gogo-B*0101 alpha chain-like involved_in IEA UniProt GO_REF:0000043 NCBI chr17:41,184,309...41,187,696 JBrowse link
G LOC103221775 patr class I histocompatibility antigen, B-2 alpha chain involved_in IEA UniProt GO_REF:0000043 NCBI chr17:41,028,313...41,032,381 JBrowse link
G LOC103221779 patr class I histocompatibility antigen, B-2 alpha chain-like involved_in IEA UniProt GO_REF:0000043 NCBI chr17:40,969,072...40,972,438 JBrowse link
G LOC103221781 class I histocompatibility antigen, Gogo-B*0101 alpha chain-like involved_in IEA UniProt GO_REF:0000043 NCBI chr17:40,916,562...40,919,866 JBrowse link
G LOC103221786 class I histocompatibility antigen, Gogo-B*0101 alpha chain involved_in IEA UniProt GO_REF:0000043 NCBI chr17:40,758,558...40,761,905 JBrowse link
G LOC103221837 popy class I histocompatibility antigen, alpha chain E involved_in IEA UniProt GO_REF:0000043 NCBI chr17:41,940,842...42,692,045
Ensembl chr17:41,941,869...41,946,176
JBrowse link
G LOC103230489 major histocompatibility complex class I-related gene protein involved_in IEA UniProt GO_REF:0000043 NCBI chr25:48,348,439...48,370,242
Ensembl chr25:48,348,196...48,369,483
JBrowse link
G LOC103247140 HLA class I histocompatibility antigen, A-11 alpha chain involved_in IEA UniProt GO_REF:0000043
G LOC103247147 HLA class I histocompatibility antigen, B alpha chain-like involved_in IEA UniProt GO_REF:0000043
G LOC119618283 patr class I histocompatibility antigen, alpha chain E involved_in IEA UniProt GO_REF:0000043
G LOC119623226 HLA class I histocompatibility antigen, B alpha chain-like involved_in IEA UniProt GO_REF:0000043
G LOC119623524 class I histocompatibility antigen, Gogo-B*0103 alpha chain-like involved_in IEA UniProt GO_REF:0000043
antigen processing and presentation of peptide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MARCHF1 membrane associated ring-CH-type finger 1 involved_in ISO (PMID:17255932), (PMID:19917682)
(PMID:18389477)
UniProt PMID:17255932 PMID:18389477 PMID:19917682 NCBI chr 7:109,978,620...110,783,623
Ensembl chr 7:109,979,056...110,063,661
JBrowse link
G MARCHF8 membrane associated ring-CH-type finger 8 involved_in ISO (PMID:16785530) UniProt PMID:16785530 NCBI chr 9:41,157,445...41,294,277 JBrowse link
antigen processing and presentation of peptide or polysaccharide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC103221700 HLA class II histocompatibility antigen, DR beta 3 chain involved_in IEA UniProt GO_REF:0000043 NCBI chr17:39,471,058...39,484,265 JBrowse link
G LOC103247136 HLA class II histocompatibility antigen, DP alpha 1 chain involved_in IEA UniProt GO_REF:0000043
G LOC103247138 HLA class II histocompatibility antigen, DP beta 1 chain-like involved_in IEA UniProt GO_REF:0000043 NCBI chr17:38,949,347...38,964,673 JBrowse link
G LOC103247148 HLA class II histocompatibility antigen, DRB1 beta chain involved_in IEA UniProt GO_REF:0000043 NCBI chr17:39,556,020...39,564,488 JBrowse link
G LOC119618083 HLA class II histocompatibility antigen, DRB1 beta chain-like involved_in IEA UniProt GO_REF:0000043
G MHC-DMA HLA class II histocompatibility antigen, DM alpha chain involved_in IEA UniProt GO_REF:0000043 NCBI chr17:39,142,340...39,151,804
Ensembl chr17:39,142,395...39,146,252
JBrowse link
G MHC-DMB major histocompatibility complex, class II, DM beta involved_in IEA UniProt GO_REF:0000043 NCBI chr17:39,153,744...39,161,029
Ensembl chr17:39,154,850...39,161,090
JBrowse link
G MHC-DOA major histocompatibility complex, class II, DO alpha involved_in IEA UniProt GO_REF:0000043 NCBI chr17:39,084,785...39,090,477
Ensembl chr17:39,085,080...39,090,474
JBrowse link
G MHC-DOB major histocompatibility complex, class II, DO beta involved_in IEA UniProt GO_REF:0000043 NCBI chr17:39,295,768...39,300,032
Ensembl chr17:39,295,828...39,300,819
JBrowse link
G MHC-DPA1 major histocompatibility complex, class II, DP alpha 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr17:39,009,361...39,017,978 JBrowse link
G MHC-DPB1 major histocompatibility complex, class II, DP beta 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr17:38,996,329...39,007,097 JBrowse link
G MHC-DQA1 major histocompatibility complex, class II, DQ alpha 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr17:39,422,445...39,428,777
Ensembl chr17:39,420,134...39,428,871
JBrowse link
G MHC-DQB1 major histocompatibility complex, class II, DQ beta 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr17:39,406,811...39,413,626
Ensembl chr17:39,406,762...39,413,277
JBrowse link
G MHC-DRA major histocompatibility complex, class II, DR alpha involved_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000107 NCBI chr17:39,623,324...39,628,464
Ensembl chr17:39,622,402...39,629,261
JBrowse link
antigen processing and presentation of polysaccharide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARL8B ARF like GTPase 8B involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:41,192,458...41,247,048
Ensembl chr22:41,192,484...41,244,822
JBrowse link
antigen processing and presentation, endogenous lipid antigen via MHC class Ib term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD1B CD1b molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:5,588,575...5,593,617
Ensembl chr20:5,590,274...5,593,364
JBrowse link
G CD1C CD1c molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:5,633,807...5,638,528
Ensembl chr20:5,634,457...5,637,860
JBrowse link
G CD1D CD1d molecule involved_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chr20:5,726,307...5,733,355
Ensembl chr20:5,727,049...5,730,061
JBrowse link
G LOC103223791 T-cell surface glycoprotein CD1e, membrane-associated involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:5,573,905...5,588,338
Ensembl chr20:5,572,822...5,577,064
JBrowse link
G LOC103225866 T-cell surface glycoprotein CD1a-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:5,665,732...5,669,282 JBrowse link
G LOC119623483 T-cell surface glycoprotein CD1a-like involved_in IEA TreeGrafter GO_REF:0000118
antigen processing and presentation, exogenous lipid antigen via MHC class Ib term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AP3B1 adaptor related protein complex 3 subunit beta 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:14557411) MGI
Ensembl
PMID:14557411 GO_REF:0000107 NCBI chr 4:72,225,658...72,524,971
Ensembl chr 4:72,225,599...72,524,933
JBrowse link
G AP3D1 adaptor related protein complex 3 subunit delta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14557411) Ensembl
MGI
PMID:14557411 GO_REF:0000107 NCBI chr 6:1,901,669...1,951,352
Ensembl chr 6:1,901,507...1,951,314
JBrowse link
G CD1B CD1b molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:5,588,575...5,593,617
Ensembl chr20:5,590,274...5,593,364
JBrowse link
G CD1C CD1c molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:5,633,807...5,638,528
Ensembl chr20:5,634,457...5,637,860
JBrowse link
G CD1D CD1d molecule acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:14557411) MGI
TreeGrafter
PMID:14557411 GO_REF:0000118 NCBI chr20:5,726,307...5,733,355
Ensembl chr20:5,727,049...5,730,061
JBrowse link
G LOC103223791 T-cell surface glycoprotein CD1e, membrane-associated involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:5,573,905...5,588,338
Ensembl chr20:5,572,822...5,577,064
JBrowse link
G LOC103225866 T-cell surface glycoprotein CD1a-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:5,665,732...5,669,282 JBrowse link
G LOC119623483 T-cell surface glycoprotein CD1a-like involved_in IEA TreeGrafter GO_REF:0000118
B cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FCER2 Fc fragment of IgE receptor II involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:7,175,032...7,189,002
Ensembl chr 6:7,175,032...7,189,057
JBrowse link
dendritic cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FCGR3A Fc fragment of IgG receptor IIIa involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:2,466,492...2,475,579 JBrowse link
G WASHC1 WASH complex subunit 1 involved_in ISO (PMID:24886983) UniProt PMID:24886983 NCBI chr11:10,075...27,633
Ensembl chr11:8,116...22,842
JBrowse link
myeloid dendritic cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC103221700 HLA class II histocompatibility antigen, DR beta 3 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,471,058...39,484,265 JBrowse link
G LOC103247148 HLA class II histocompatibility antigen, DRB1 beta chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,556,020...39,564,488 JBrowse link
G LOC119618083 HLA class II histocompatibility antigen, DRB1 beta chain-like involved_in IEA Ensembl GO_REF:0000107
G MHC-DRA major histocompatibility complex, class II, DR alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,623,324...39,628,464
Ensembl chr17:39,622,402...39,629,261
JBrowse link
negative regulation of antigen processing and presentation of endogenous peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HFE homeostatic iron regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:46,159,770...46,168,831
Ensembl chr17:46,156,685...46,164,649
JBrowse link
negative regulation of antigen processing and presentation of peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TAPBPL TAP binding protein like involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:6,500,157...6,510,777
Ensembl chr11:6,499,614...6,515,027
JBrowse link
negative regulation of antigen processing and presentation of peptide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MHC-DOA major histocompatibility complex, class II, DO alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,084,785...39,090,477
Ensembl chr17:39,085,080...39,090,474
JBrowse link
G MHC-DOB major histocompatibility complex, class II, DO beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,295,768...39,300,032
Ensembl chr17:39,295,828...39,300,819
JBrowse link
negative regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G THBS1 thrombospondin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:43,410,693...43,427,816
Ensembl chr26:43,410,580...43,427,812
JBrowse link
negative regulation of dendritic cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD68 CD68 molecule involved_in ISO (PMID:21572087) ARUK-UCL PMID:21572087 NCBI chr16:6,956,633...6,959,645
Ensembl chr16:6,957,212...6,959,042
JBrowse link
G FGL2 fibrinogen like 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:29341118) Ensembl
MGI
PMID:29341118 GO_REF:0000107 NCBI chr21:71,735,486...71,741,951
Ensembl chr21:71,735,253...71,742,954
JBrowse link
G THBS1 thrombospondin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:43,410,693...43,427,816
Ensembl chr26:43,410,580...43,427,812
JBrowse link
negative regulation of macrophage antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGL2 fibrinogen like 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:29341118) Ensembl
MGI
PMID:29341118 GO_REF:0000107 NCBI chr21:71,735,486...71,741,951
Ensembl chr21:71,735,253...71,742,954
JBrowse link
peptide antigen assembly with MHC class I protein complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2M beta-2-microglobulin involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:38,331,818...38,338,785
Ensembl chr26:38,331,442...38,338,809
JBrowse link
G CALR calreticulin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:11,618,691...11,624,299
Ensembl chr 6:11,618,396...11,623,792
JBrowse link
G PDIA3 protein disulfide isomerase family A member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:39,273,982...39,300,170
Ensembl chr26:39,272,997...39,349,966
JBrowse link
G TAPBP TAP binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:38,762,934...38,776,247
Ensembl chr17:38,763,206...38,773,768
JBrowse link
G TAPBPL TAP binding protein like involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:6,500,157...6,510,777
Ensembl chr11:6,499,614...6,515,027
JBrowse link
peptide antigen assembly with MHC class II protein complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC103221700 HLA class II histocompatibility antigen, DR beta 3 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,471,058...39,484,265 JBrowse link
G LOC103247148 HLA class II histocompatibility antigen, DRB1 beta chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,556,020...39,564,488 JBrowse link
G LOC119618083 HLA class II histocompatibility antigen, DRB1 beta chain-like involved_in IEA Ensembl GO_REF:0000107
G MHC-DMA HLA class II histocompatibility antigen, DM alpha chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,142,340...39,151,804
Ensembl chr17:39,142,395...39,146,252
JBrowse link
G MHC-DMB major histocompatibility complex, class II, DM beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,153,744...39,161,029
Ensembl chr17:39,154,850...39,161,090
JBrowse link
G MHC-DRA major histocompatibility complex, class II, DR alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,623,324...39,628,464
Ensembl chr17:39,622,402...39,629,261
JBrowse link
peptide antigen stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TAPBP TAP binding protein involved_in ISO (PMID:12594855) UniProt PMID:12594855 NCBI chr17:38,762,934...38,776,247
Ensembl chr17:38,763,206...38,773,768
JBrowse link
peptide antigen transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TAP2 transporter 2, ATP binding cassette subfamily B member involved_in ISO (PMID:8496691)
(PMID:1538751)
UniProt PMID:1538751 PMID:8496691 NCBI chr17:39,266,870...39,277,658 JBrowse link
plasmacytoid dendritic cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLEC4A C-type lectin domain family 4 member A involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:8,190,312...8,207,451
Ensembl chr11:8,190,370...8,207,438
JBrowse link
positive regulation of antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MHC-DQB1 major histocompatibility complex, class II, DQ beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,406,811...39,413,626
Ensembl chr17:39,406,762...39,413,277
JBrowse link
positive regulation of antigen processing and presentation of peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TAP2 transporter 2, ATP binding cassette subfamily B member ISO RGD PMID:1758495 RGD:1299069 NCBI chr17:39,266,870...39,277,658 JBrowse link
positive regulation of antigen processing and presentation of peptide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PYCARD PYD and CARD domain containing involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:27,892,332...27,894,386
Ensembl chr 5:27,889,230...27,893,697
JBrowse link
G TREM2 triggering receptor expressed on myeloid cells 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:30,965,091...30,999,073
Ensembl chr17:30,994,357...30,999,087
JBrowse link
positive regulation of dendritic cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCL19 C-C motif chemokine ligand 19 involved_in ISO (PMID:15845453) BHF-UCL PMID:15845453 NCBI chr12:45,928,212...45,930,897
Ensembl chr12:45,929,071...45,930,904
JBrowse link
G CCL21 C-C motif chemokine ligand 21 involved_in ISO (PMID:15845453) BHF-UCL PMID:15845453 NCBI chr12:45,787,118...45,788,506
Ensembl chr12:45,787,356...45,908,711
JBrowse link
G CCR7 C-C motif chemokine receptor 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:65,620,632...65,632,394
Ensembl chr16:65,620,665...65,632,984
JBrowse link
G CD74 CD74 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:53,008,802...53,022,953
Ensembl chr23:53,009,394...53,022,923
JBrowse link
G NOD1 nucleotide binding oligomerization domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:27,907,628...27,957,621
Ensembl chr21:27,926,710...27,957,619
JBrowse link
G NOD2 nucleotide binding oligomerization domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:36,492,158...36,531,766
Ensembl chr 5:36,496,414...36,530,499
JBrowse link
G SLC11A1 solute carrier family 11 member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18984740) Ensembl
MGI
PMID:18984740 GO_REF:0000107 NCBI chr10:104,276,553...104,288,466 JBrowse link
positive regulation of macrophage antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FAM3D FAM3 metabolism regulating signaling molecule D acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:29853563) MGI
Ensembl
PMID:29853563 GO_REF:0000107 NCBI chr22:19,929,632...19,964,541
Ensembl chr22:19,929,635...19,963,201
JBrowse link
regulation of antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTSS cathepsin S involved_in ISO (PMID:22365146) ARUK-UCL PMID:22365146
G PTPN22 protein tyrosine phosphatase non-receptor type 22 NOT|involved_in ISO (PMID:23871208) UniProt PMID:23871208 NCBI chr20:19,792,807...19,855,784
Ensembl chr20:19,793,083...19,855,827
JBrowse link
G YTHDF1 YTH N6-methyladenosine RNA binding protein F1 involved_in ISO (PMID:30728504) UniProt PMID:30728504 NCBI chr 2:985,373...1,010,533
Ensembl chr 2:985,425...1,012,091
JBrowse link
regulation of T cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WAS WASP actin nucleation promoting factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:45,809,418...45,817,165
Ensembl chr  X:45,809,189...45,817,667
JBrowse link
T cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ICAM1 intercellular adhesion molecule 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:2479693) Ensembl
MGI
PMID:2479693 GO_REF:0000107 NCBI chr 6:9,320,991...9,338,125
Ensembl chr 6:9,322,550...9,338,263
JBrowse link
G LOC103222345 trem-like transcript 4 protein acts_upstream_of_or_within ISO (PMID:22210914) MGI PMID:22210914 NCBI chr17:30,907,797...30,923,226
Ensembl chr17:30,915,052...30,923,486
JBrowse link
G RFTN1 raftlin, lipid raft linker 1 involved_in ISO (PMID:19414744) UniProt PMID:19414744 NCBI chr15:61,159,573...61,290,342
Ensembl chr15:61,159,930...61,289,965
JBrowse link
G TREX1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO (PMID:24218451) MGI PMID:24218451 NCBI chr22:9,869,502...9,871,659 JBrowse link
G UNC93B1 unc-93 homolog B1, TLR signaling regulator acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:16415873) MGI
Ensembl
PMID:16415873 GO_REF:0000107 NCBI chr 1:6,537,198...6,549,457
Ensembl chr 1:6,537,273...6,549,450
JBrowse link

Term paths to the root