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ONTOLOGY REPORT - ANNOTATIONS


Term:antigen processing and presentation
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Accession:GO:0019882 term browser browse the term
Definition:The process in which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex.
Synonyms:exact_synonym: antigen presentation;   antigen processing
 alt_id: GO:0030333
 xref: Wikipedia:Antigen_presentation



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antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AP3B1 adaptor related protein complex 3 subunit beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14557411) Ensembl
MGI
PMID:14557411 GO_REF:0000107 NCBI chr 5:37,015,518...37,305,769
Ensembl chr 5:37,503,162...37,840,205
JBrowse link
G AP3D1 adaptor related protein complex 3 subunit delta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14557411) Ensembl
MGI
PMID:14557411 GO_REF:0000107 NCBI chr19:1,110,419...1,161,826
Ensembl chr19:2,085,540...2,137,593
JBrowse link
G CD1D CD1d molecule acts_upstream_of_or_within ISO (PMID:11754812) MGI PMID:11754812 NCBI chr 1:133,549,258...133,557,752
Ensembl chr 1:137,341,690...137,348,173
JBrowse link
G CD74 CD74 molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11754812), (PMID:3864916), (PMID:7985028)
(PMID:9432982)
InterPro
TreeGrafter
MGI
Ensembl
PMID:3864916 PMID:7985028 PMID:9432982 PMID:11754812 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:145,825,635...145,836,916
Ensembl chr 5:151,830,311...151,841,334
JBrowse link
G EXT1 exostosin glycosyltransferase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23733868) Ensembl
MGI
PMID:23733868 GO_REF:0000107 NCBI chr 8:114,489,325...114,803,763
Ensembl chr 8:117,011,919...117,324,851
JBrowse link
G FLT3 fms related receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (PMID:20457904) MGI PMID:20457904 NCBI chr13:9,283,747...9,381,553
Ensembl chr13:27,627,178...27,723,940
JBrowse link
G GBA1 glucosylceramidase beta 1 acts_upstream_of_or_within ISO (PMID:22665763) MGI PMID:22665763 NCBI chr 1:130,579,300...130,589,560
Ensembl chr 1:134,185,385...134,194,851
JBrowse link
G IFNG interferon gamma acts_upstream_of_or_within ISO (PMID:15356141) MGI PMID:15356141 NCBI chr12:65,663,764...65,668,732
Ensembl chr12:68,448,861...68,453,829
JBrowse link
G LOC100967723 HLA class II histocompatibility antigen, DO alpha chain involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11069069) InterPro
MGI
Ensembl
PMID:11069069 GO_REF:0000002 GO_REF:0000107 NCBI chr 6:32,573,975...32,579,398
Ensembl chr 6:33,689,171...33,694,576
JBrowse link
G LOC100968989 HLA class II histocompatibility antigen, DM alpha chain involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11148202), (PMID:7584146), (PMID:7985028)
(PMID:9432982)
InterPro
MGI
PMID:7584146 PMID:7985028 PMID:9432982 PMID:11148202 GO_REF:0000002 NCBI chr 6:32,518,060...32,537,989
Ensembl chr 6:33,634,123...33,637,988
JBrowse link
G LOC100970847 HLA class II histocompatibility antigen, DO beta chain involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:32,381,463...32,387,377
Ensembl chr 6:33,497,652...33,501,451
JBrowse link
G LOC100972641 HLA class II histocompatibility antigen, DQ beta 2 chain involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:32,328,807...32,336,211
Ensembl chr 6:33,444,552...33,451,976
JBrowse link
G LOC100972994 HLA class II histocompatibility antigen, DQ beta 1 chain involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9432982) InterPro
MGI
PMID:9432982 GO_REF:0000002 NCBI chr 6:32,237,395...32,244,201
Ensembl chr 6:33,353,599...33,360,272
JBrowse link
G LOC100973583 HLA class II histocompatibility antigen, DQ alpha 2 chain involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:32,314,091...32,319,909
Ensembl chr 6:33,429,832...33,435,363
JBrowse link
G LOC100979338 putative HLA class I histocompatibility antigen, alpha chain H involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:29,663,779...29,667,352
Ensembl chr 6:30,333,360...30,391,211
JBrowse link
G LOC100979649 HLA class II histocompatibility antigen, DQ alpha 1 chain involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:32,219,459...32,225,849 JBrowse link
G LOC100982294 class I histocompatibility antigen, Gogo-C*0202 alpha chain involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:31,020,373...31,024,959
Ensembl chr 6:31,910,788...31,914,286
JBrowse link
G LOC100982859 class I histocompatibility antigen, Gogo-B*0101 alpha chain involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:31,106,562...31,109,933
Ensembl chr 6:31,997,381...32,000,067
JBrowse link
G LOC100986750 HLA class II histocompatibility antigen, DRB1 beta chain involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:32,161,609...32,174,945
Ensembl chr 6:33,039,711...33,050,939
JBrowse link
G LOC100987081 HLA class II histocompatibility antigen, DR alpha chain involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:32,105,421...32,110,579
Ensembl chr 6:32,982,228...32,987,417
JBrowse link
G LOC100995226 HLA class II histocompatibility antigen, DP beta 1 chain involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:32,648,780...32,659,613
Ensembl chr 6:33,763,566...33,774,387
JBrowse link
G LOC100995577 HLA class II histocompatibility antigen, DP alpha 1 chain involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:32,637,826...32,646,501
Ensembl chr 6:33,752,638...33,761,417
JBrowse link
G MHC-A patr class I histocompatibility antigen, A-2 alpha chain-like involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:29,718,578...29,721,648
Ensembl chr 6:30,333,360...30,391,211
JBrowse link
G MHC-DMB HLA class II histocompatibility antigen, DM beta chain involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:32,504,074...32,510,669
Ensembl chr 6:33,619,870...33,625,685
JBrowse link
G PSAP prosaposin acts_upstream_of_or_within ISO (PMID:14684827) MGI PMID:14684827 NCBI chr10:68,286,359...68,321,349
Ensembl chr10:70,810,881...70,828,781
JBrowse link
G PSMB8 proteasome 20S subunit beta 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15356141) Ensembl
MGI
PMID:15356141 GO_REF:0000107 NCBI chr 6:32,410,172...32,414,136
Ensembl chr 6:33,525,681...33,529,897
JBrowse link
G PSMB9 proteasome 20S subunit beta 9 acts_upstream_of_or_within ISO (PMID:15356141) MGI PMID:15356141 NCBI chr 6:32,423,614...32,429,062
Ensembl chr 6:33,539,060...33,564,402
JBrowse link
G RAB10 RAB10, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:26,034,046...26,132,658
Ensembl chr2A:26,125,985...26,228,505
JBrowse link
G RAB27A RAB27A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:34,174,491...34,263,045
Ensembl chr15:52,498,202...52,529,984
JBrowse link
G RAB32 RAB32, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 6:149,053,138...149,069,059 JBrowse link
G RAB32 RAB32, member RAS oncogene family involved_in ISO (PMID:19717423) UniProt PMID:19717423 NCBI chr 6:144,339,323...144,354,885 JBrowse link
G RAB33A RAB33A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:119,298,428...119,311,625
Ensembl chr  X:129,591,222...129,605,214
JBrowse link
G RAB34 RAB34, member RAS oncogene family involved_in ISO (PMID:19717423) UniProt PMID:19717423 NCBI chr17:28,057,077...28,061,234
Ensembl chr17:28,562,118...28,566,242
JBrowse link
G RAB35 RAB35, member RAS oncogene family involved_in ISO (PMID:19717423) UniProt PMID:19717423 NCBI chr12:117,670,693...117,692,322 JBrowse link
G RAB3B RAB3B, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:51,170,956...51,242,828
Ensembl chr 1:52,666,713...52,723,975
JBrowse link
G RAB3C RAB3C, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:55,150,508...55,428,094
Ensembl chr 5:56,795,195...57,062,710
JBrowse link
G RAB4A RAB4A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:204,818,445...204,849,775
Ensembl chr 1:209,848,620...209,883,305
JBrowse link
G RAB5B RAB5B, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:32,916,314...32,939,047
Ensembl chr12:33,168,254...33,188,676
JBrowse link
G RAB6A RAB6A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:68,751,163...68,837,324
Ensembl chr11:72,063,663...72,148,144
JBrowse link
G RAB8B RAB8B, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:42,136,776...42,214,792
Ensembl chr15:60,432,749...60,510,547
JBrowse link
G RELB RELB proto-oncogene, NF-kB subunit involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:7845467) Ensembl
MGI
PMID:7845467 GO_REF:0000107 NCBI chr19:41,948,559...41,987,121
Ensembl chr19:50,554,864...50,590,223
JBrowse link
G UNC93B1 unc-93 homolog B1, TLR signaling regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20457904) Ensembl
MGI
PMID:20457904 GO_REF:0000107 NCBI chr11:63,073,076...63,086,078
Ensembl chr11:66,382,059...66,394,541
JBrowse link
G WDFY4 WDFY family member 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:30409884) Ensembl
TreeGrafter
MGI
PMID:30409884 GO_REF:0000107 GO_REF:0000118 NCBI chr10:45,262,213...45,560,401 JBrowse link
antigen processing and presentation following phagocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARL8B ARF like GTPase 8B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:5,069,592...5,127,301
Ensembl chr 3:5,169,950...5,225,543
JBrowse link
antigen processing and presentation of endogenous antigen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG5 autophagy related 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23382543) Ensembl
MGI
PMID:23382543 GO_REF:0000107 NCBI chr 6:103,997,824...104,140,931
Ensembl chr 6:107,871,208...108,013,807
JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2M beta-2-microglobulin involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:23,668,108...23,674,791
Ensembl chr15:41,836,345...41,842,991
JBrowse link
G IDE insulin degrading enzyme involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:89,196,295...89,320,223
Ensembl chr10:92,716,540...92,833,353
JBrowse link
G TAP1 transporter 1, ATP binding cassette subfamily B member involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:32,414,665...32,423,488
Ensembl chr 6:33,530,171...33,538,978
JBrowse link
G TAP2 transporter 2, ATP binding cassette subfamily B member acts_upstream_of_or_within
involved_in
ISO
IEA
PMID:1758495 MGI
InterPro
Ensembl
PMID:1758495 GO_REF:0000002 GO_REF:0000107 RGD:1299069 NCBI chr 6:32,394,586...32,408,297
Ensembl chr 6:33,507,332...33,523,750
JBrowse link
G TAPBP TAP binding protein involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:32,871,768...32,886,679
Ensembl chr 6:33,986,058...34,000,190
JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-dependent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TAP2 transporter 2, ATP binding cassette subfamily B member involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:1538753) Ensembl
MGI
PMID:1538753 GO_REF:0000107 NCBI chr 6:32,394,586...32,408,297
Ensembl chr 6:33,507,332...33,523,750
JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-independent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100977055 patr class I histocompatibility antigen, alpha chain E involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:30,233,293...30,238,056
Ensembl chr 6:31,101,251...31,107,262
JBrowse link
G LOC100978457 patr class I histocompatibility antigen, CH28 alpha chain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:29,523,929...29,529,385
Ensembl chr 6:30,181,133...30,186,082
JBrowse link
G LOC100978774 patr class I histocompatibility antigen, alpha chain G involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:29,616,091...29,620,270
Ensembl chr 6:30,286,395...30,390,865
JBrowse link
G LOC100979338 putative HLA class I histocompatibility antigen, alpha chain H involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:29,663,779...29,667,352
Ensembl chr 6:30,333,360...30,391,211
JBrowse link
G LOC100980965 zinc-alpha-2-glycoprotein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:91,999,717...92,009,066
Ensembl chr 7:105,432,782...105,442,219
JBrowse link
G LOC100982294 class I histocompatibility antigen, Gogo-C*0202 alpha chain involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 6:31,020,373...31,024,959
Ensembl chr 6:31,910,788...31,914,286
JBrowse link
G LOC100982859 class I histocompatibility antigen, Gogo-B*0101 alpha chain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:31,106,562...31,109,933
Ensembl chr 6:31,997,381...32,000,067
JBrowse link
G LOC100985629 UL16-binding protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:147,744,025...147,751,795 JBrowse link
G LOC100988536 UL-16 binding protein 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:147,719,511...147,725,765
Ensembl chr 6:152,424,827...152,430,940
JBrowse link
G MHC-A patr class I histocompatibility antigen, A-2 alpha chain-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:29,718,578...29,721,648
Ensembl chr 6:30,333,360...30,391,211
JBrowse link
G RAET1E retinoic acid early transcript 1E involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:147,695,601...147,703,327
Ensembl chr 6:152,400,887...152,408,583
JBrowse link
G RAET1L retinoic acid early transcript 1L involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:147,831,368...147,836,716 JBrowse link
G ULBP1 UL16 binding protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:147,798,494...147,811,888
Ensembl chr 6:152,477,350...152,486,911
JBrowse link
G ULBP3 UL16 binding protein 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:147,875,098...147,882,746
Ensembl chr 6:152,581,662...152,588,430
JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class Ib term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100977055 patr class I histocompatibility antigen, alpha chain E involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 6:30,233,293...30,238,056
Ensembl chr 6:31,101,251...31,107,262
JBrowse link
G LOC100978457 patr class I histocompatibility antigen, CH28 alpha chain involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 6:29,523,929...29,529,385
Ensembl chr 6:30,181,133...30,186,082
JBrowse link
G LOC100978774 patr class I histocompatibility antigen, alpha chain G involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 6:29,616,091...29,620,270
Ensembl chr 6:30,286,395...30,390,865
JBrowse link
G LOC100979338 putative HLA class I histocompatibility antigen, alpha chain H involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:29,663,779...29,667,352
Ensembl chr 6:30,333,360...30,391,211
JBrowse link
G LOC100980965 zinc-alpha-2-glycoprotein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:91,999,717...92,009,066
Ensembl chr 7:105,432,782...105,442,219
JBrowse link
G LOC100982294 class I histocompatibility antigen, Gogo-C*0202 alpha chain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:31,020,373...31,024,959
Ensembl chr 6:31,910,788...31,914,286
JBrowse link
G LOC100982859 class I histocompatibility antigen, Gogo-B*0101 alpha chain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:31,106,562...31,109,933
Ensembl chr 6:31,997,381...32,000,067
JBrowse link
G LOC100985629 UL16-binding protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:147,744,025...147,751,795 JBrowse link
G LOC100988536 UL-16 binding protein 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:147,719,511...147,725,765
Ensembl chr 6:152,424,827...152,430,940
JBrowse link
G MHC-A patr class I histocompatibility antigen, A-2 alpha chain-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:29,718,578...29,721,648
Ensembl chr 6:30,333,360...30,391,211
JBrowse link
G RAET1E retinoic acid early transcript 1E involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:147,695,601...147,703,327
Ensembl chr 6:152,400,887...152,408,583
JBrowse link
G RAET1L retinoic acid early transcript 1L involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:147,831,368...147,836,716 JBrowse link
G ULBP1 UL16 binding protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:147,798,494...147,811,888
Ensembl chr 6:152,477,350...152,486,911
JBrowse link
G ULBP3 UL16 binding protein 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:147,875,098...147,882,746
Ensembl chr 6:152,581,662...152,588,430
JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-dependent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100977055 patr class I histocompatibility antigen, alpha chain E acts_upstream_of_or_within ISO (PMID:1538753) MGI PMID:1538753 NCBI chr 6:30,233,293...30,238,056
Ensembl chr 6:31,101,251...31,107,262
JBrowse link
G TAP2 transporter 2, ATP binding cassette subfamily B member involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:1538753) Ensembl
MGI
PMID:1538753 GO_REF:0000107 NCBI chr 6:32,394,586...32,408,297
Ensembl chr 6:33,507,332...33,523,750
JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100987081 HLA class II histocompatibility antigen, DR alpha chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:32,105,421...32,110,579
Ensembl chr 6:32,982,228...32,987,417
JBrowse link
antigen processing and presentation of exogenous antigen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FCGR1A Fc gamma receptor Ia acts_upstream_of_or_within ISO (PMID:11911823) MGI PMID:11911823 NCBI chr 1:125,127,073...125,136,911
Ensembl chr 1:128,805,484...128,814,220
JBrowse link
G LOC100972084 major histocompatibility complex class I-related gene protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:156,510,588...156,538,447
Ensembl chr 1:160,178,106...160,198,420
JBrowse link
G PSME1 proteasome activator subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15944286) Ensembl
MGI
PMID:15944286 GO_REF:0000107 NCBI chr14:4,912,390...4,915,219
Ensembl chr14:23,033,548...23,039,405
JBrowse link
G PSME2 proteasome activator subunit 2 acts_upstream_of_or_within ISO (PMID:15944286) MGI PMID:15944286 NCBI chr14:4,919,628...4,922,952
Ensembl chr14:23,043,807...23,047,296
JBrowse link
antigen processing and presentation of exogenous peptide antigen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MPEG1 macrophage expressed 1 involved_in ISO (PMID:35471730) UniProt PMID:35471730 NCBI chr11:54,425,904...54,442,631
Ensembl chr11:57,880,109...57,882,259
JBrowse link
antigen processing and presentation of exogenous peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLEC4A C-type lectin domain family 4 member A involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:8,242,240...8,257,860
Ensembl chr12:8,285,174...8,300,029
JBrowse link
G FCER1G Fc epsilon receptor Ig acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:11911824) MGI
TreeGrafter
PMID:11911824 GO_REF:0000118 NCBI chr 1:136,627,672...136,631,696
Ensembl chr 1:140,539,555...140,544,810
JBrowse link
G FCGR1A Fc gamma receptor Ia acts_upstream_of_or_within ISO (PMID:11911824) MGI PMID:11911824 NCBI chr 1:125,127,073...125,136,911
Ensembl chr 1:128,805,484...128,814,220
JBrowse link
G IFI30 IFI30 lysosomal thiol reductase involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:17,652,935...17,657,239
Ensembl chr19:18,629,663...18,635,046
JBrowse link
G MFSD6 major facilitator superfamily domain containing 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:17010536) MGI
TreeGrafter
PMID:17010536 GO_REF:0000118 NCBI chr2B:77,716,691...77,804,302
Ensembl chr2B:195,658,295...195,720,548
JBrowse link
G MPEG1 macrophage expressed 1 involved_in ISO (PMID:37347855) UniProt PMID:37347855 NCBI chr11:54,425,904...54,442,631
Ensembl chr11:57,880,109...57,882,259
JBrowse link
antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TAPBP TAP binding protein acts_upstream_of_or_within
involved_in
ISO (PMID:9716645) MGI
UniProt
PMID:9716645 NCBI chr 6:32,871,768...32,886,679
Ensembl chr 6:33,986,058...34,000,190
JBrowse link
antigen processing and presentation of exogenous peptide antigen via MHC class Ib term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100977055 patr class I histocompatibility antigen, alpha chain E involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:30,233,293...30,238,056
Ensembl chr 6:31,101,251...31,107,262
JBrowse link
G LOC100978457 patr class I histocompatibility antigen, CH28 alpha chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:29,523,929...29,529,385
Ensembl chr 6:30,181,133...30,186,082
JBrowse link
antigen processing and presentation of exogenous peptide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD74 CD74 molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:7679955), (PMID:8598040) Ensembl
MGI
PMID:7679955 PMID:8598040 GO_REF:0000107 NCBI chr 5:145,825,635...145,836,916
Ensembl chr 5:151,830,311...151,841,334
JBrowse link
G CTSE cathepsin E involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 1:181,617,421...181,632,260
Ensembl chr 1:185,900,746...185,915,519
JBrowse link
G CTSS cathepsin S involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:126,084,249...126,118,221
Ensembl chr 1:129,733,996...129,768,318
JBrowse link
G FCER1G Fc epsilon receptor Ig acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:14643301) MGI
TreeGrafter
PMID:14643301 GO_REF:0000118 NCBI chr 1:136,627,672...136,631,696
Ensembl chr 1:140,539,555...140,544,810
JBrowse link
G FCGR2B Fc gamma receptor IIb acts_upstream_of_or_within ISO (PMID:14643301) MGI PMID:14643301 NCBI chr 1:137,074,342...137,090,962
Ensembl chr 1:140,882,043...140,890,637
JBrowse link
G IFI30 IFI30 lysosomal thiol reductase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11701933) Ensembl
MGI
PMID:11701933 GO_REF:0000107 NCBI chr19:17,652,935...17,657,239
Ensembl chr19:18,629,663...18,635,046
JBrowse link
G LGMN legumain involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:73,337,607...73,383,462
Ensembl chr14:92,677,608...92,723,051
JBrowse link
G LOC100967723 HLA class II histocompatibility antigen, DO alpha chain involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9492004) Ensembl
MGI
PMID:9492004 GO_REF:0000107 NCBI chr 6:32,573,975...32,579,398
Ensembl chr 6:33,689,171...33,694,576
JBrowse link
G LOC100968989 HLA class II histocompatibility antigen, DM alpha chain acts_upstream_of_or_within ISO (PMID:8598040)
(PMID:11027433)
(PMID:8598041)
(PMID:11714799)
MGI PMID:8598040 PMID:8598041 PMID:11027433 PMID:11714799 NCBI chr 6:32,518,060...32,537,989
Ensembl chr 6:33,634,123...33,637,988
JBrowse link
G LOC100972994 HLA class II histocompatibility antigen, DQ beta 1 chain involved_in
acts_upstream_of_or_within
ISO (PMID:32341563)
(PMID:11027433), (PMID:11069069), (PMID:11714799), (PMID:7679955), (PMID:8598040), (PMID:8598041), (PMID:9432982), (PMID:9492004)
UniProt
MGI
PMID:7679955 PMID:8598040 PMID:8598041 PMID:9432982 PMID:9492004 More... NCBI chr 6:32,237,395...32,244,201
Ensembl chr 6:33,353,599...33,360,272
JBrowse link
G LOC100987081 HLA class II histocompatibility antigen, DR alpha chain involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11027433), (PMID:11714799) Ensembl
MGI
PMID:11027433 PMID:11714799 GO_REF:0000107 NCBI chr 6:32,105,421...32,110,579
Ensembl chr 6:32,982,228...32,987,417
JBrowse link
G LOC100995226 HLA class II histocompatibility antigen, DP beta 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:32,648,780...32,659,613
Ensembl chr 6:33,763,566...33,774,387
JBrowse link
G LOC100995577 HLA class II histocompatibility antigen, DP alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:32,637,826...32,646,501
Ensembl chr 6:33,752,638...33,761,417
JBrowse link
G MHC-DMB HLA class II histocompatibility antigen, DM beta chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:32,504,074...32,510,669
Ensembl chr 6:33,619,870...33,625,685
JBrowse link
G PIKFYVE phosphoinositide kinase, FYVE-type zinc finger containing involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:95,505,376...95,597,792
Ensembl chr2B:213,628,997...213,721,299
JBrowse link
G TRAF6 TNF receptor associated factor 6 acts_upstream_of_or_within ISO (PMID:14499111) MGI PMID:14499111 NCBI chr11:36,457,633...36,483,616
Ensembl chr11:36,335,609...36,356,334
JBrowse link
G UNC93B1 unc-93 homolog B1, TLR signaling regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16415873) Ensembl
MGI
PMID:16415873 GO_REF:0000107 NCBI chr11:63,073,076...63,086,078
Ensembl chr11:66,382,059...66,394,541
JBrowse link
antigen processing and presentation of exogenous protein antigen via MHC class Ib, TAP-dependent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2M beta-2-microglobulin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16299293) Ensembl
MGI
PMID:16299293 GO_REF:0000107 NCBI chr15:23,668,108...23,674,791
Ensembl chr15:41,836,345...41,842,991
JBrowse link
G TAP2 transporter 2, ATP binding cassette subfamily B member involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16299293) Ensembl
MGI
PMID:16299293 GO_REF:0000107 NCBI chr 6:32,394,586...32,408,297
Ensembl chr 6:33,507,332...33,523,750
JBrowse link
antigen processing and presentation of peptide antigen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTSL cathepsin L involved_in ISO (PMID:12021314), (PMID:9545226) UniProt PMID:9545226 PMID:12021314 NCBI chr 9:58,851,899...58,857,170
Ensembl chr 9:86,903,006...86,908,303
JBrowse link
G CTSS cathepsin S involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:126,084,249...126,118,221
Ensembl chr 1:129,733,996...129,768,318
JBrowse link
G LOC100972994 HLA class II histocompatibility antigen, DQ beta 1 chain acts_upstream_of_or_within ISO (PMID:11069069) MGI PMID:11069069 NCBI chr 6:32,237,395...32,244,201
Ensembl chr 6:33,353,599...33,360,272
JBrowse link
G SLC11A1 solute carrier family 11 member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17620357) Ensembl
MGI
PMID:17620357 GO_REF:0000107 NCBI chr2B:105,640,613...105,655,524
Ensembl chr2B:224,238,284...224,252,941
JBrowse link
antigen processing and presentation of peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCB9 ATP binding cassette subfamily B member 9 NOT|involved_in ISO (PMID:17977821) UniProt PMID:17977821 NCBI chr12:120,523,592...120,573,322
Ensembl chr12:124,760,277...124,815,853
JBrowse link
G B2M beta-2-microglobulin involved_in IEA UniProt GO_REF:0000043 NCBI chr15:23,668,108...23,674,791
Ensembl chr15:41,836,345...41,842,991
JBrowse link
G LOC100972084 major histocompatibility complex class I-related gene protein involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:156,510,588...156,538,447
Ensembl chr 1:160,178,106...160,198,420
JBrowse link
G LOC100978774 patr class I histocompatibility antigen, alpha chain G involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:29,616,091...29,620,270
Ensembl chr 6:30,286,395...30,390,865
JBrowse link
G LOC100979338 putative HLA class I histocompatibility antigen, alpha chain H involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:29,663,779...29,667,352
Ensembl chr 6:30,333,360...30,391,211
JBrowse link
G LOC100982294 class I histocompatibility antigen, Gogo-C*0202 alpha chain involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:31,020,373...31,024,959
Ensembl chr 6:31,910,788...31,914,286
JBrowse link
G LOC100982859 class I histocompatibility antigen, Gogo-B*0101 alpha chain involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:31,106,562...31,109,933
Ensembl chr 6:31,997,381...32,000,067
JBrowse link
G MHC-A patr class I histocompatibility antigen, A-2 alpha chain-like involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:29,718,578...29,721,648
Ensembl chr 6:30,333,360...30,391,211
JBrowse link
antigen processing and presentation of peptide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MARCHF1 membrane associated ring-CH-type finger 1 involved_in ISO (PMID:18389477)
(PMID:17255932), (PMID:19917682)
UniProt PMID:17255932 PMID:18389477 PMID:19917682 NCBI chr 4:155,791,599...156,639,456
Ensembl chr 4:167,583,874...168,153,648
JBrowse link
G MARCHF8 membrane associated ring-CH-type finger 8 involved_in ISO (PMID:16785530) UniProt PMID:16785530 NCBI chr10:42,539,079...42,677,277
Ensembl chr10:45,718,172...45,796,771
JBrowse link
antigen processing and presentation of peptide or polysaccharide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100967723 HLA class II histocompatibility antigen, DO alpha chain involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:32,573,975...32,579,398
Ensembl chr 6:33,689,171...33,694,576
JBrowse link
G LOC100968989 HLA class II histocompatibility antigen, DM alpha chain involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:32,518,060...32,537,989
Ensembl chr 6:33,634,123...33,637,988
JBrowse link
G LOC100970847 HLA class II histocompatibility antigen, DO beta chain involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:32,381,463...32,387,377
Ensembl chr 6:33,497,652...33,501,451
JBrowse link
G LOC100972641 HLA class II histocompatibility antigen, DQ beta 2 chain involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:32,328,807...32,336,211
Ensembl chr 6:33,444,552...33,451,976
JBrowse link
G LOC100972994 HLA class II histocompatibility antigen, DQ beta 1 chain involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:32,237,395...32,244,201
Ensembl chr 6:33,353,599...33,360,272
JBrowse link
G LOC100973583 HLA class II histocompatibility antigen, DQ alpha 2 chain involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:32,314,091...32,319,909
Ensembl chr 6:33,429,832...33,435,363
JBrowse link
G LOC100979649 HLA class II histocompatibility antigen, DQ alpha 1 chain involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:32,219,459...32,225,849 JBrowse link
G LOC100986750 HLA class II histocompatibility antigen, DRB1 beta chain involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:32,161,609...32,174,945
Ensembl chr 6:33,039,711...33,050,939
JBrowse link
G LOC100987081 HLA class II histocompatibility antigen, DR alpha chain involved_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000107 NCBI chr 6:32,105,421...32,110,579
Ensembl chr 6:32,982,228...32,987,417
JBrowse link
G LOC100995226 HLA class II histocompatibility antigen, DP beta 1 chain involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:32,648,780...32,659,613
Ensembl chr 6:33,763,566...33,774,387
JBrowse link
G LOC100995577 HLA class II histocompatibility antigen, DP alpha 1 chain involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:32,637,826...32,646,501
Ensembl chr 6:33,752,638...33,761,417
JBrowse link
G MHC-DMB HLA class II histocompatibility antigen, DM beta chain involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:32,504,074...32,510,669
Ensembl chr 6:33,619,870...33,625,685
JBrowse link
antigen processing and presentation of polysaccharide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARL8B ARF like GTPase 8B involved_in ISO (PMID:25637027) UniProt PMID:25637027 NCBI chr 3:5,069,592...5,127,301
Ensembl chr 3:5,169,950...5,225,543
JBrowse link
antigen processing and presentation, endogenous lipid antigen via MHC class Ib term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD1A CD1a molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:133,574,983...133,617,542
Ensembl chr 1:137,403,872...137,407,057
JBrowse link
G CD1B CD1b molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:133,686,155...133,689,732
Ensembl chr 1:137,476,898...137,480,471
JBrowse link
G CD1C CD1c molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:133,647,482...133,651,575
Ensembl chr 1:137,437,235...137,441,075
JBrowse link
G CD1D CD1d molecule involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 1:133,549,258...133,557,752
Ensembl chr 1:137,341,690...137,348,173
JBrowse link
G LOC100985794 T-cell surface glycoprotein CD1e, membrane-associated involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:133,712,012...133,716,093
Ensembl chr 1:137,502,315...137,506,799
JBrowse link
antigen processing and presentation, exogenous lipid antigen via MHC class Ib term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AP3B1 adaptor related protein complex 3 subunit beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14557411) Ensembl
MGI
PMID:14557411 GO_REF:0000107 NCBI chr 5:37,015,518...37,305,769
Ensembl chr 5:37,503,162...37,840,205
JBrowse link
G AP3D1 adaptor related protein complex 3 subunit delta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14557411) Ensembl
MGI
PMID:14557411 GO_REF:0000107 NCBI chr19:1,110,419...1,161,826
Ensembl chr19:2,085,540...2,137,593
JBrowse link
G CD1A CD1a molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:133,574,983...133,617,542
Ensembl chr 1:137,403,872...137,407,057
JBrowse link
G CD1B CD1b molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:133,686,155...133,689,732
Ensembl chr 1:137,476,898...137,480,471
JBrowse link
G CD1C CD1c molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:133,647,482...133,651,575
Ensembl chr 1:137,437,235...137,441,075
JBrowse link
G CD1D CD1d molecule acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:14557411) MGI
TreeGrafter
PMID:14557411 GO_REF:0000118 NCBI chr 1:133,549,258...133,557,752
Ensembl chr 1:137,341,690...137,348,173
JBrowse link
G LOC100985794 T-cell surface glycoprotein CD1e, membrane-associated involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:133,712,012...133,716,093
Ensembl chr 1:137,502,315...137,506,799
JBrowse link
B cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FCER2 Fc epsilon receptor II involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:6,978,116...6,989,986
Ensembl chr19:7,834,106...7,844,924
JBrowse link
dendritic cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FCGR3A Fc gamma receptor IIIa involved_in ISO (PMID:28389502) UniProt PMID:28389502 NCBI chr 1:137,027,943...137,036,738 JBrowse link
G MPEG1 macrophage expressed 1 involved_in ISO (PMID:37347855) UniProt PMID:37347855 NCBI chr11:54,425,904...54,442,631
Ensembl chr11:57,880,109...57,882,259
JBrowse link
myeloid dendritic cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100987081 HLA class II histocompatibility antigen, DR alpha chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:32,105,421...32,110,579
Ensembl chr 6:32,982,228...32,987,417
JBrowse link
negative regulation of antigen processing and presentation of endogenous peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HFE homeostatic iron regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:25,921,663...25,930,852
Ensembl chr 6:26,580,358...26,588,591
JBrowse link
negative regulation of antigen processing and presentation of peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TAPBPL TAP binding protein like involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:6,582,266...6,592,762
Ensembl chr12:6,499,429...6,509,844
JBrowse link
negative regulation of antigen processing and presentation of peptide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100967723 HLA class II histocompatibility antigen, DO alpha chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:32,573,975...32,579,398
Ensembl chr 6:33,689,171...33,694,576
JBrowse link
G LOC100970847 HLA class II histocompatibility antigen, DO beta chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:32,381,463...32,387,377
Ensembl chr 6:33,497,652...33,501,451
JBrowse link
negative regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G THBS1 thrombospondin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:18,521,802...18,538,172
Ensembl chr15:36,776,756...36,793,170
JBrowse link
negative regulation of dendritic cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD68 CD68 molecule involved_in ISO (PMID:21572087) ARUK-UCL PMID:21572087 NCBI chr17:7,610,725...7,613,696
Ensembl chr17:7,596,947...7,599,981
JBrowse link
G FGL2 fibrinogen like 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:29341118) Ensembl
MGI
PMID:29341118 GO_REF:0000107 NCBI chr 7:69,114,082...69,120,575
Ensembl chr 7:82,926,266...82,932,550
JBrowse link
G THBS1 thrombospondin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:18,521,802...18,538,172
Ensembl chr15:36,776,756...36,793,170
JBrowse link
negative regulation of macrophage antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGL2 fibrinogen like 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:29341118) Ensembl
MGI
PMID:29341118 GO_REF:0000107 NCBI chr 7:69,114,082...69,120,575
Ensembl chr 7:82,926,266...82,932,550
JBrowse link
peptide antigen assembly with MHC class I protein complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2M beta-2-microglobulin involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:23,668,108...23,674,791
Ensembl chr15:41,836,345...41,842,991
JBrowse link
G CALR calreticulin involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:12,501,013...12,506,909
Ensembl chr19:13,242,900...13,249,416
JBrowse link
G PDIA3 protein disulfide isomerase family A member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:22,706,520...22,731,672
Ensembl chr15:40,794,144...40,821,763
JBrowse link
G TAPBP TAP binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:32,871,768...32,886,679
Ensembl chr 6:33,986,058...34,000,190
JBrowse link
G TAPBPL TAP binding protein like involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:6,582,266...6,592,762
Ensembl chr12:6,499,429...6,509,844
JBrowse link
peptide antigen assembly with MHC class II protein complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100968989 HLA class II histocompatibility antigen, DM alpha chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:32,518,060...32,537,989
Ensembl chr 6:33,634,123...33,637,988
JBrowse link
G LOC100987081 HLA class II histocompatibility antigen, DR alpha chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:32,105,421...32,110,579
Ensembl chr 6:32,982,228...32,987,417
JBrowse link
G MHC-DMB HLA class II histocompatibility antigen, DM beta chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:32,504,074...32,510,669
Ensembl chr 6:33,619,870...33,625,685
JBrowse link
peptide antigen stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TAPBP TAP binding protein involved_in ISO (PMID:12594855) UniProt PMID:12594855 NCBI chr 6:32,871,768...32,886,679
Ensembl chr 6:33,986,058...34,000,190
JBrowse link
peptide antigen transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TAP2 transporter 2, ATP binding cassette subfamily B member involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:32,394,586...32,408,297
Ensembl chr 6:33,507,332...33,523,750
JBrowse link
plasmacytoid dendritic cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLEC4A C-type lectin domain family 4 member A involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:8,242,240...8,257,860
Ensembl chr12:8,285,174...8,300,029
JBrowse link
positive regulation of antigen processing and presentation of peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TAP2 transporter 2, ATP binding cassette subfamily B member ISO RGD PMID:1758495 RGD:1299069 NCBI chr 6:32,394,586...32,408,297
Ensembl chr 6:33,507,332...33,523,750
JBrowse link
positive regulation of antigen processing and presentation of peptide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PYCARD PYD and CARD domain containing involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:23,764,386...23,765,732
Ensembl chr16:31,571,363...31,573,828
JBrowse link
G TREM2 triggering receptor expressed on myeloid cells 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:40,735,483...40,740,208
Ensembl chr 6:42,043,900...42,048,578
JBrowse link
positive regulation of dendritic cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCL19 C-C motif chemokine ligand 19 involved_in ISO (PMID:15845453) BHF-UCL PMID:15845453 NCBI chr 9:34,525,820...34,527,628
Ensembl chr 9:35,334,353...35,336,108
JBrowse link
G CCL21 C-C motif chemokine ligand 21 involved_in ISO (PMID:15845453) BHF-UCL PMID:15845453 NCBI chr 9:34,545,248...34,546,801
Ensembl chr 9:35,353,768...35,354,924
JBrowse link
G CCR7 C-C motif chemokine receptor 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:16,720,236...16,731,955
Ensembl chr17:16,949,119...16,956,370
JBrowse link
G CD74 CD74 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:145,825,635...145,836,916
Ensembl chr 5:151,830,311...151,841,334
JBrowse link
G NOD1 nucleotide binding oligomerization domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:31,060,245...31,109,012
Ensembl chr 7:31,182,275...31,208,742
JBrowse link
G NOD2 nucleotide binding oligomerization domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:30,955,976...30,995,451
Ensembl chr16:49,837,891...49,873,773
JBrowse link
G SLC11A1 solute carrier family 11 member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18984740) Ensembl
MGI
PMID:18984740 GO_REF:0000107 NCBI chr2B:105,640,613...105,655,524
Ensembl chr2B:224,238,284...224,252,941
JBrowse link
positive regulation of macrophage antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FAM3D FAM3 metabolism regulating signaling molecule D acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:29853563) MGI
Ensembl
PMID:29853563 GO_REF:0000107 NCBI chr 3:58,564,083...58,685,370
Ensembl chr 3:59,973,612...59,993,727
JBrowse link
regulation of antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CST7 cystatin F acts_upstream_of ISO (PMID:22365146) ARUK-UCL PMID:22365146 NCBI chr20:24,889,834...24,900,766
Ensembl chr20:25,237,251...25,248,364
JBrowse link
G CTSS cathepsin S involved_in ISO (PMID:22365146) ARUK-UCL PMID:22365146 NCBI chr 1:126,084,249...126,118,221
Ensembl chr 1:129,733,996...129,768,318
JBrowse link
G PTPN22 protein tyrosine phosphatase non-receptor type 22 NOT|involved_in ISO (PMID:23871208) UniProt PMID:23871208 NCBI chr 1:88,685,736...88,743,164
Ensembl chr 1:123,734,511...123,790,830
JBrowse link
G YTHDF1 YTH N6-methyladenosine RNA binding protein F1 involved_in ISO (PMID:30728504) UniProt PMID:30728504 NCBI chr20:59,575,703...59,596,447
Ensembl chr20:61,116,645...61,135,769
JBrowse link
regulation of T cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WAS WASP actin nucleation promoting factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:40,982,132...40,989,767
Ensembl chr  X:48,842,765...48,850,380
JBrowse link
T cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ICAM1 intercellular adhesion molecule 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:2479693) Ensembl
MGI
PMID:2479693 GO_REF:0000107 NCBI chr19:9,821,402...9,837,021
Ensembl chr19:10,484,414...10,500,605
JBrowse link
G KDM5D lysine demethylase 5D acts_upstream_of_or_within ISO (PMID:16301625) MGI PMID:16301625
G RFTN1 raftlin, lipid raft linker 1 involved_in ISO (PMID:19414744) UniProt PMID:19414744 NCBI chr 3:16,241,255...16,441,402
Ensembl chr 3:16,578,092...16,778,464
JBrowse link
G TREX1 three prime repair exonuclease 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24218451) Ensembl
MGI
PMID:24218451 GO_REF:0000107 NCBI chr 3:48,387,762...48,389,693
Ensembl chr 3:49,470,222...49,471,331
JBrowse link
G UNC93B1 unc-93 homolog B1, TLR signaling regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16415873) Ensembl
MGI
PMID:16415873 GO_REF:0000107 NCBI chr11:63,073,076...63,086,078
Ensembl chr11:66,382,059...66,394,541
JBrowse link

Term paths to the root