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ONTOLOGY REPORT - ANNOTATIONS

Term:antigen processing and presentation
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Accession:GO:0019882 term browser browse the term
Definition:The process in which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex.
Synonyms:exact_synonym: antigen presentation;   antigen processing
 alt_id: GO:0030333
 xref: Wikipedia:Antigen_presentation


show annotations for term's descendants           Sort by:
antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap3b1 adaptor related protein complex 3 subunit beta 1 acts_upstream_of_or_within ISO MGI:1856989 (PMID:14557411) RGD PMID:14557411 NCBI chr 2:25,600,069...25,800,937
Ensembl chr 2:25,600,040...25,800,935 		JBrowse link
G Ap3d1 adaptor related protein complex 3 subunit delta 1 acts_upstream_of_or_within ISO MGI:1856083 (PMID:14557411) RGD PMID:14557411 NCBI chr 7:8,970,249...9,005,651
Ensembl chr 7:8,970,291...9,005,643 		JBrowse link
G Cd1d1 CD1d1 molecule acts_upstream_of_or_within ISO (PMID:11754812) RGD PMID:11754812 NCBI chr 2:172,423,582...172,427,089
Ensembl chr 2:172,423,582...172,427,089 		JBrowse link
G Cd74 CD74 molecule involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000002
MGI:1927530 (PMID:11754812), (PMID:3864916), (PMID:7985028), (PMID:9432982)
GO_REF:0000033		 InterPro
RGD
GO_Central		 PMID:3864916 PMID:7985028 PMID:9432982 PMID:11754812 GO_REF:0000002 GO_REF:0000033 NCBI chr18:54,256,757...54,266,003
Ensembl chr18:54,256,778...54,266,003 		JBrowse link
G Erap1 endoplasmic reticulum aminopeptidase 1 TAS RGD PMID:12436109 RGD:1299520 NCBI chr 2:3,931,817...3,970,735
Ensembl chr 2:3,931,904...3,972,447 		JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO (PMID:23733868) RGD PMID:23733868 NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357 		JBrowse link
G Flt3 Fms related receptor tyrosine kinase 3 acts_upstream_of_or_within ISO MGI:3628823 (PMID:20457904) RGD PMID:20457904 NCBI chr12:7,623,930...7,699,474
Ensembl chr12:7,623,930...7,699,474 		JBrowse link
G Gba1 glucosylceramidase beta 1 acts_upstream_of_or_within ISO (PMID:22665763) RGD PMID:22665763 NCBI chr 2:174,609,437...174,615,457
Ensembl chr 2:174,609,403...174,618,263 		JBrowse link
G Ifng interferon gamma acts_upstream_of_or_within ISO (PMID:15356141) RGD PMID:15356141 NCBI chr 7:53,903,339...53,907,375
Ensembl chr 7:53,903,337...53,907,375 		JBrowse link
G Psap prosaposin acts_upstream_of_or_within ISO MGI:1888378 (PMID:14684827) RGD PMID:14684827 NCBI chr20:28,214,229...28,240,501
Ensembl chr20:28,214,271...28,240,498 		JBrowse link
G Psmb8 proteasome 20S subunit beta 8 acts_upstream_of_or_within
involved_in		 NAS
ISO
IEA		 MGI:3055222 (PMID:15356141)
GO_REF:0000107		 RGD
Ensembl		 PMID:15356141 PMID:1451788 GO_REF:0000107, RGD:70234 NCBI chr20:4,652,159...4,655,122
Ensembl chr20:4,652,159...4,655,283 		JBrowse link
G Psmb9 proteasome 20S subunit beta 9 acts_upstream_of_or_within ISO MGI:2152729 (PMID:15356141) RGD PMID:15356141 NCBI chr20:4,667,044...4,672,512
Ensembl chr20:4,666,046...4,672,512 		JBrowse link
G Rab10 RAB10, member RAS oncogene family involved_in ISO
IEA		 (PMID:19717423)
GO_REF:0000107		 RGD
Ensembl		 PMID:19717423 GO_REF:0000107 NCBI chr 6:26,267,081...26,319,739
Ensembl chr 6:26,266,859...26,320,193 		JBrowse link
G Rab27a RAB27A, member RAS oncogene family involved_in ISO (PMID:19717423) RGD PMID:19717423 NCBI chr 8:73,782,730...73,836,630
Ensembl chr 8:73,782,694...73,847,829 		JBrowse link
G Rab32 RAB32, member RAS oncogene family involved_in ISO (PMID:19717423) RGD PMID:19717423 NCBI chr 1:4,946,193...4,961,003
Ensembl chr 1:4,945,036...4,960,934 		JBrowse link
G Rab33a RAB33A, member RAS oncogene family involved_in ISO (PMID:19717423) RGD PMID:19717423 NCBI chr  X:127,694,219...127,706,378
Ensembl chr  X:127,694,964...127,706,378 		JBrowse link
G Rab34 RAB34, member RAS oncogene family involved_in ISO
IEA		 (PMID:19717423)
GO_REF:0000107		 RGD
Ensembl		 PMID:19717423 GO_REF:0000107 NCBI chr10:63,083,319...63,087,538
Ensembl chr10:63,083,338...63,087,538 		JBrowse link
G Rab35 RAB35, member RAS oncogene family involved_in ISO
IEA		 (PMID:19717423)
GO_REF:0000107		 RGD
Ensembl		 PMID:19717423 GO_REF:0000107 NCBI chr12:40,967,102...40,981,183
Ensembl chr12:40,967,103...40,991,195 		JBrowse link
G Rab3b RAB3B, member RAS oncogene family involved_in ISO
IEA		 (PMID:19717423)
GO_REF:0000107		 RGD
Ensembl		 PMID:19717423 GO_REF:0000107 NCBI chr 5:123,629,562...123,697,410
Ensembl chr 5:123,644,423...123,697,401 		JBrowse link
G Rab3c RAB3C, member RAS oncogene family involved_in ISO (PMID:19717423) RGD PMID:19717423 NCBI chr 2:41,627,720...41,843,541
Ensembl chr 2:41,627,720...41,843,749 		JBrowse link
G Rab4a RAB4A, member RAS oncogene family involved_in ISO (PMID:19717423) RGD PMID:19717423 NCBI chr19:51,795,613...51,822,706
Ensembl chr19:51,795,613...51,822,703 		JBrowse link
G Rab5b RAB5B, member RAS oncogene family involved_in ISO (PMID:19717423) RGD PMID:19717423 NCBI chr 7:1,109,449...1,128,348
Ensembl chr 7:1,109,454...1,128,268 		JBrowse link
G Rab6a RAB6A, member RAS oncogene family involved_in ISO
IEA		 (PMID:19717423)
GO_REF:0000107		 RGD
Ensembl		 PMID:19717423 GO_REF:0000107 NCBI chr 1:154,957,870...155,008,922
Ensembl chr 1:154,958,189...154,996,715 		JBrowse link
G Rab8b RAB8B, member RAS oncogene family involved_in ISO (PMID:19717423) RGD PMID:19717423 NCBI chr 8:67,458,921...67,536,466
Ensembl chr 8:67,458,923...67,536,384 		JBrowse link
G Relb RELB proto-oncogene, NF-kB subunit acts_upstream_of_or_within ISO MGI:2179544 (PMID:7845467) RGD PMID:7845467 NCBI chr 1:79,257,738...79,285,490
Ensembl chr 1:79,257,725...79,285,507 		JBrowse link
G RT1-Ba RT1 class II, locus Ba acts_upstream_of_or_within ISO (PMID:9432982) RGD PMID:9432982 NCBI chr20:4,575,134...4,579,727
Ensembl chr20:4,575,134...4,579,744 		JBrowse link
G RT1-Bb RT1 class II, locus Bb acts_upstream_of_or_within ISO (PMID:9432982) RGD PMID:9432982 NCBI chr20:4,596,558...4,602,201
Ensembl chr20:4,596,559...4,607,597 		JBrowse link
G RT1-CE16 RT1 class I, locus CE16 acts_upstream_of_or_within ISO (PMID:20038604) RGD PMID:20038604 NCBI chr20:3,257,109...3,260,747
Ensembl chr20:3,257,123...3,279,563 		JBrowse link
G RT1-DMa RT1 class II, locus DMa acts_upstream_of_or_within ISO MGI:1861933 (PMID:11148202), (PMID:7584146), (PMID:7985028), (PMID:9432982) RGD PMID:7584146 PMID:7985028 PMID:9432982 PMID:11148202 NCBI chr20:4,707,028...4,710,432
Ensembl chr20:4,707,028...4,710,432 		JBrowse link
G RT1-DMb RT1 class II, locus DMb acts_upstream_of_or_within ISO (PMID:11148202) RGD PMID:11148202 NCBI chr20:4,693,102...4,700,340
Ensembl chr20:4,693,103...4,700,340 		JBrowse link
G RT1-DOa RT1 class II, locus DOa acts_upstream_of_or_within ISO MGI:2386294 (PMID:11069069) RGD PMID:11069069 NCBI chr20:4,753,587...4,756,590
Ensembl chr20:4,753,598...4,756,577 		JBrowse link
G Unc93b1 unc-93 homolog B1, TLR signaling regulator acts_upstream_of_or_within ISO MGI:3619211 (PMID:20457904) RGD PMID:20457904 NCBI chr 1:201,167,388...201,178,343
Ensembl chr 1:201,152,693...201,178,338 		JBrowse link
G Wdfy4 WDFY family member 4 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:30409884)		 GO_Central
RGD		 PMID:30409884 GO_REF:0000033 NCBI chr16:8,221,853...8,450,494
Ensembl chr16:8,221,719...8,450,491 		JBrowse link
antigen processing and presentation following phagocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl8b ARF like GTPase 8B involved_in ISS
ISO		 GO_REF:0000024
(PMID:21802320)		 UniProt
RGD		 PMID:21802320 GO_REF:0000024 NCBI chr 4:141,748,634...141,792,605
Ensembl chr 4:141,748,587...141,792,596 		JBrowse link
antigen processing and presentation of endogenous antigen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg5 autophagy related 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1338803|MGI:3612279 (PMID:23382543)		 Ensembl
RGD		 PMID:23382543 GO_REF:0000107 NCBI chr20:47,798,217...47,889,216
Ensembl chr20:47,798,290...47,889,209 		JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2m beta-2 microglobulin involved_in ISO
IEA		 UniProtKB:P04439 (PMID:24643698)
GO_REF:0000107		 RGD
Ensembl		 PMID:24643698 GO_REF:0000107 NCBI chr 3:109,095,740...109,101,764
Ensembl chr 3:109,095,729...109,101,766 		JBrowse link
G Ide insulin degrading enzyme involved_in ISO
IEA
ISS		 (PMID:20364150)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:20364150 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:235,002,984...235,102,448
Ensembl chr 1:234,995,351...235,102,440 		JBrowse link
G RT1-CE16 RT1 class I, locus CE16 involved_in ISO (PMID:1402688), (PMID:20364150), (PMID:24643698) RGD PMID:1402688 PMID:20364150 PMID:24643698 NCBI chr20:3,257,109...3,260,747
Ensembl chr20:3,257,123...3,279,563 		JBrowse link
G Tap1 transporter 1, ATP binding cassette subfamily B member involved_in IEA
IBA
ISO		 GO_REF:0000107
GO_REF:0000033
(PMID:11133832)		 Ensembl
GO_Central
RGD		 PMID:11133832 GO_REF:0000033 GO_REF:0000107 NCBI chr20:4,656,262...4,666,634
Ensembl chr20:4,656,263...4,666,901 		JBrowse link
G Tap2 transporter 2, ATP binding cassette subfamily B member involved_in
acts_upstream_of_or_within		 ISO
IDA		 (PMID:1538751), (PMID:8496691)
PMID:1758495		 RGD PMID:1538751 PMID:8496691 PMID:1758495 RGD:1299069 NCBI chr20:4,636,347...4,650,387
Ensembl chr20:4,636,357...4,650,407 		JBrowse link
G Tapbp TAP binding protein involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:4,956,937...4,966,191
Ensembl chr20:4,956,937...4,966,181 		JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-dependent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RT1-CE16 RT1 class I, locus CE16 involved_in ISO (PMID:8630735) RGD PMID:8630735 NCBI chr20:3,257,109...3,260,747
Ensembl chr20:3,257,123...3,279,563 		JBrowse link
G Tap2 transporter 2, ATP binding cassette subfamily B member involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:1538753)		 Ensembl
RGD		 PMID:1538753 GO_REF:0000107 NCBI chr20:4,636,347...4,650,387
Ensembl chr20:4,636,357...4,650,407 		JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-independent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07000147.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G AABR07001348.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 1:39,668,472...39,670,153 JBrowse link
G AABR07044308.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr20:1,789,779...1,793,115 JBrowse link
G AABR07044383.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr20:3,403,777...3,436,874 JBrowse link
G Azgp1 alpha-2-glycoprotein 1, zinc-binding involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:16,930,990...16,939,333
Ensembl chr12:16,931,024...16,939,091 		JBrowse link
G ENSRNOG00000064836 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr20:2,606,621...2,618,153 JBrowse link
G ENSRNOG00000070971 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 1:1,841,026...1,859,446 JBrowse link
G H2-M10.6l histocompatibility 2, M region locus 10.6 like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:1,958,270...1,965,247
Ensembl chr20:1,925,049...1,966,105 		JBrowse link
G H60al histocompatibility 60a like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:1,382,896...1,386,846
Ensembl chr 1:1,588,152...1,590,424 		JBrowse link
G LOC120093164 retinoic acid early-inducible protein 1-gamma-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:1,807,226...1,812,755
Ensembl chr 1:1,807,644...1,812,755 		JBrowse link
G Raet1l retinoic acid early transcript 1L involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:1,979,433...1,984,410
Ensembl chr 1:1,979,443...1,984,410 		JBrowse link
G Raet1ll1 retinoic acid early transcript 1L like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:1,397,219...1,437,802
Ensembl chr 1:1,397,230...1,402,656 		JBrowse link
G RT1-A RT1 class I, locus A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G RT1-A-ps RT1 class I, A, pseudogene involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr20:2,630,622...2,634,751 JBrowse link
G RT1-CE1 RT1 class I, locus1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:3,555,779...3,559,487
Ensembl chr20:3,555,782...3,559,486 		JBrowse link
G RT1-CE10 RT1 class I, locus CE10 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:3,377,284...3,380,301 JBrowse link
G RT1-CE11 RT1 class I, locus CE11 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:3,355,393...3,358,520
Ensembl chr20:3,350,937...3,380,362 		JBrowse link
G RT1-CE12 RT1 class I, locus CE12 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:3,338,907...3,342,547 JBrowse link
G RT1-CE14 RT1 class I, locus CE14 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:3,296,654...3,300,795
Ensembl chr20:3,297,196...3,305,134 		JBrowse link
G RT1-CE16 RT1 class I, locus CE16 involved_in ISO
IBA		 (PMID:22031944)
GO_REF:0000033		 RGD
GO_Central		 PMID:22031944 GO_REF:0000033 NCBI chr20:3,257,109...3,260,747
Ensembl chr20:3,257,123...3,279,563 		JBrowse link
G RT1-CE3 RT1 class I, locus CE3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:3,516,647...3,520,938
Ensembl chr20:2,623,953...2,692,081 		JBrowse link
G Rt1-ec3 RT1 class I, locus EC3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr20:3,310,825...3,421,372 JBrowse link
G RT1-M1-2 RT1 class I, locus M1, gene 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:1,909,506...1,913,423
Ensembl chr20:1,910,656...1,917,936 		JBrowse link
G RT1-M1-4 RT1 class I, locus M1, gene 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:1,891,365...1,893,585
Ensembl chr20:1,889,164...1,893,815 		JBrowse link
G RT1-M1-5 RT1 class I, M1, gene 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:1,858,608...1,860,708
Ensembl chr20:1,811,604...1,860,708 		JBrowse link
G RT1-M10-ps1 RT1 class I, locus M10, pseudogene 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:1,986,817...1,988,908
Ensembl chr20:1,986,788...2,020,117 		JBrowse link
G RT1-M10-ps5 RT1 class I, locus M10, pseudogene 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr20:1,768,641...1,772,357 JBrowse link
G RT1-M2 RT1 class Ib, locus M2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:978,918...981,510
Ensembl chr20:978,935...981,723 		JBrowse link
G RT1-M3-1 RT1 class Ib, locus M3, gene 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:1,323,976...1,328,126
Ensembl chr20:1,287,521...1,328,117 		JBrowse link
G RT1-M5 RT1 class Ib, locus M5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:1,546,496...1,548,948
Ensembl chr20:1,546,511...1,548,775 		JBrowse link
G RT1-M6-2 RT1 class I, locus M6, gene 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:1,583,267...1,587,099
Ensembl chr20:1,583,299...1,586,215 		JBrowse link
G RT1-N1 RT1 class Ib, locus N1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G RT1-N2 RT1 class Ib, locus N2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,641,157...2,645,439
Ensembl chr20:2,641,202...2,644,900 		JBrowse link
G RT1-N3 RT1 class Ib, locus N3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,659,132...2,665,536
Ensembl chr20:2,661,584...2,665,530 		JBrowse link
G RT1-O1l1 RT1 class Ib, locus O1 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,624,073...2,658,023
Ensembl chr20:2,623,953...2,692,081 		JBrowse link
G RT1-S3 RT1 class Ib, locus S3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,670,654...2,675,411
Ensembl chr20:2,670,709...2,675,411 		JBrowse link
G RT1-T24-1 RT1 class I, locus T24, gene 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,761,495...2,774,871
Ensembl chr20:2,718,279...2,776,154 		JBrowse link
G RT1-T24-3 RT1 class I, locus T24, gene 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,718,210...2,730,604
Ensembl chr20:2,718,279...2,776,154 		JBrowse link
G RT1-T24-4 RT1 class I, locus T24, gene 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,684,515...2,747,878
Ensembl chr20:2,684,515...2,692,511
Ensembl chr20:2,684,515...2,692,511 		JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class Ib term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07000147.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G AABR07001348.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 1:39,668,472...39,670,153 JBrowse link
G AABR07044308.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr20:1,789,779...1,793,115 JBrowse link
G AABR07044383.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr20:3,403,777...3,436,874 JBrowse link
G Azgp1 alpha-2-glycoprotein 1, zinc-binding involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:16,930,990...16,939,333
Ensembl chr12:16,931,024...16,939,091 		JBrowse link
G ENSRNOG00000064836 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr20:2,606,621...2,618,153 JBrowse link
G ENSRNOG00000070971 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 1:1,841,026...1,859,446 JBrowse link
G H2-M10.6l histocompatibility 2, M region locus 10.6 like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:1,958,270...1,965,247
Ensembl chr20:1,925,049...1,966,105 		JBrowse link
G H60al histocompatibility 60a like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:1,382,896...1,386,846
Ensembl chr 1:1,588,152...1,590,424 		JBrowse link
G LOC120093164 retinoic acid early-inducible protein 1-gamma-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:1,807,226...1,812,755
Ensembl chr 1:1,807,644...1,812,755 		JBrowse link
G Raet1l retinoic acid early transcript 1L involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:1,979,433...1,984,410
Ensembl chr 1:1,979,443...1,984,410 		JBrowse link
G Raet1ll1 retinoic acid early transcript 1L like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:1,397,219...1,437,802
Ensembl chr 1:1,397,230...1,402,656 		JBrowse link
G RT1-A RT1 class I, locus A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G RT1-A-ps RT1 class I, A, pseudogene involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr20:2,630,622...2,634,751 JBrowse link
G RT1-A2 RT1 class Ia, locus A2 involved_in ISO (PMID:9754572) RGD PMID:9754572 NCBI chr20:4,870,939...4,910,183 JBrowse link
G RT1-CE1 RT1 class I, locus1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:3,555,779...3,559,487
Ensembl chr20:3,555,782...3,559,486 		JBrowse link
G RT1-CE10 RT1 class I, locus CE10 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:3,377,284...3,380,301 JBrowse link
G RT1-CE11 RT1 class I, locus CE11 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:3,355,393...3,358,520
Ensembl chr20:3,350,937...3,380,362 		JBrowse link
G RT1-CE12 RT1 class I, locus CE12 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:3,338,907...3,342,547 JBrowse link
G RT1-CE14 RT1 class I, locus CE14 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:3,296,654...3,300,795
Ensembl chr20:3,297,196...3,305,134 		JBrowse link
G RT1-CE16 RT1 class I, locus CE16 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:3,257,109...3,260,747
Ensembl chr20:3,257,123...3,279,563 		JBrowse link
G RT1-CE3 RT1 class I, locus CE3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:3,516,647...3,520,938
Ensembl chr20:2,623,953...2,692,081 		JBrowse link
G RT1-CE5 RT1 class I, locus CE5 involved_in ISO (PMID:28636952) RGD PMID:28636952 NCBI chr20:3,403,418...3,479,476 JBrowse link
G Rt1-ec3 RT1 class I, locus EC3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr20:3,310,825...3,421,372 JBrowse link
G RT1-M1-2 RT1 class I, locus M1, gene 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:1,909,506...1,913,423
Ensembl chr20:1,910,656...1,917,936 		JBrowse link
G RT1-M1-4 RT1 class I, locus M1, gene 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:1,891,365...1,893,585
Ensembl chr20:1,889,164...1,893,815 		JBrowse link
G RT1-M1-5 RT1 class I, M1, gene 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:1,858,608...1,860,708
Ensembl chr20:1,811,604...1,860,708 		JBrowse link
G RT1-M10-ps1 RT1 class I, locus M10, pseudogene 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:1,986,817...1,988,908
Ensembl chr20:1,986,788...2,020,117 		JBrowse link
G RT1-M10-ps5 RT1 class I, locus M10, pseudogene 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr20:1,768,641...1,772,357 JBrowse link
G RT1-M2 RT1 class Ib, locus M2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:978,918...981,510
Ensembl chr20:978,935...981,723 		JBrowse link
G RT1-M3-1 RT1 class Ib, locus M3, gene 1 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:7584149), (PMID:8805247)
(PMID:8464890)
GO_REF:0000033		 RGD
GO_Central		 PMID:7584149 PMID:8464890 PMID:8805247 GO_REF:0000033 NCBI chr20:1,323,976...1,328,126
Ensembl chr20:1,287,521...1,328,117 		JBrowse link
G RT1-M5 RT1 class Ib, locus M5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:1,546,496...1,548,948
Ensembl chr20:1,546,511...1,548,775 		JBrowse link
G RT1-M6-2 RT1 class I, locus M6, gene 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:1,583,267...1,587,099
Ensembl chr20:1,583,299...1,586,215 		JBrowse link
G RT1-N1 RT1 class Ib, locus N1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G RT1-N2 RT1 class Ib, locus N2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,641,157...2,645,439
Ensembl chr20:2,641,202...2,644,900 		JBrowse link
G RT1-N3 RT1 class Ib, locus N3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,659,132...2,665,536
Ensembl chr20:2,661,584...2,665,530 		JBrowse link
G RT1-O1l1 RT1 class Ib, locus O1 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,624,073...2,658,023
Ensembl chr20:2,623,953...2,692,081 		JBrowse link
G RT1-S3 RT1 class Ib, locus S3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,670,654...2,675,411
Ensembl chr20:2,670,709...2,675,411 		JBrowse link
G RT1-T24-1 RT1 class I, locus T24, gene 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,761,495...2,774,871
Ensembl chr20:2,718,279...2,776,154 		JBrowse link
G RT1-T24-3 RT1 class I, locus T24, gene 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,718,210...2,730,604
Ensembl chr20:2,718,279...2,776,154 		JBrowse link
G RT1-T24-4 RT1 class I, locus T24, gene 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,684,515...2,747,878
Ensembl chr20:2,684,515...2,692,511
Ensembl chr20:2,684,515...2,692,511 		JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-dependent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RT1-A2 RT1 class Ia, locus A2 acts_upstream_of_or_within ISO (PMID:1538753) RGD PMID:1538753 NCBI chr20:4,870,939...4,910,183 JBrowse link
G Tap2 transporter 2, ATP binding cassette subfamily B member involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:1538751)
(PMID:1538753)
GO_REF:0000107		 RGD
Ensembl		 PMID:1538751 PMID:1538753 GO_REF:0000107 NCBI chr20:4,636,347...4,650,387
Ensembl chr20:4,636,357...4,650,407 		JBrowse link
antigen processing and presentation of endogenous peptide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RT1-Da RT1 class II, locus Da involved_in ISO (PMID:15322540) RGD PMID:15322540 NCBI chr20:4,513,464...4,518,457
Ensembl chr20:4,512,911...4,518,455 		JBrowse link
G RT1-Db1 RT1 class II, locus Db1 involved_in ISO (PMID:15322540) RGD PMID:15322540 NCBI chr20:4,548,664...4,558,237
Ensembl chr20:4,548,666...4,558,258 		JBrowse link
antigen processing and presentation of exogenous antigen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fcgr1a Fc gamma receptor 1A acts_upstream_of_or_within ISO MGI:2679238 (PMID:11911823) RGD PMID:11911823 NCBI chr 2:183,851,075...183,860,077
Ensembl chr 2:183,851,077...183,859,994 		JBrowse link
G Mr1 major histocompatibility complex, class I-related involved_in ISO
IEA		 (PMID:27043408)
GO_REF:0000107		 RGD
Ensembl		 PMID:27043408 GO_REF:0000107 NCBI chr13:67,298,362...67,317,985
Ensembl chr13:67,299,585...67,317,970 		JBrowse link
G Psme1 proteasome activator subunit 1 acts_upstream_of_or_within ISO MGI:2388600 (PMID:15944286) RGD PMID:15944286 NCBI chr15:29,069,012...29,071,888
Ensembl chr15:29,068,729...29,071,890 		JBrowse link
G Psme2 proteasome activator subunit 2 acts_upstream_of_or_within ISO MGI:2388601 (PMID:15944286) RGD PMID:15944286 NCBI chr15:29,078,495...29,082,794
Ensembl chr15:29,078,500...29,082,946 		JBrowse link
antigen processing and presentation of exogenous peptide antigen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mpeg1 macrophage expressed 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:35471730)		 UniProt
RGD		 PMID:35471730 GO_REF:0000024 NCBI chr 1:209,452,176...209,456,692
Ensembl chr 1:209,452,133...209,458,855 		JBrowse link
antigen processing and presentation of exogenous peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec4a C-type lectin domain family 4, member A involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 4:156,340,439...156,434,212
Ensembl chr 4:156,414,688...156,432,402 		JBrowse link
G Clec4a3 C-type lectin domain family 4, member A3 involved_in ISO (PMID:20530286) RGD PMID:20530286 NCBI chr 4:156,214,030...156,224,818
Ensembl chr 4:156,214,718...156,224,817 		JBrowse link
G Fcer1g Fc epsilon receptor Ig involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:2384004 (PMID:11911824)		 GO_Central
RGD		 PMID:11911824 GO_REF:0000033 NCBI chr13:83,649,447...83,654,248
Ensembl chr13:83,649,449...83,671,443 		JBrowse link
G Fcgr1a Fc gamma receptor 1A acts_upstream_of_or_within ISO MGI:2664927 (PMID:11911824) RGD PMID:11911824 NCBI chr 2:183,851,075...183,860,077
Ensembl chr 2:183,851,077...183,859,994 		JBrowse link
G Fcgr2a Fc gamma receptor 2A acts_upstream_of_or_within ISO MGI:1861924 (PMID:11911824) RGD PMID:11911824 NCBI chr13:83,280,782...83,297,535
Ensembl chr13:83,280,784...83,295,967 		JBrowse link
G Ifi30 IFI30, lysosomal thiol reductase involved_in ISS
ISO		 GO_REF:0000024
(PMID:20538950)		 UniProt
RGD		 PMID:20538950 GO_REF:0000024 NCBI chr16:18,675,590...18,679,655
Ensembl chr16:18,675,613...18,681,175 		JBrowse link
G Mfsd6 major facilitator superfamily domain containing 6 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:17010536)		 GO_Central
RGD		 PMID:17010536 GO_REF:0000033 NCBI chr 9:48,773,171...48,858,471
Ensembl chr 9:48,773,414...48,858,465 		JBrowse link
G Mpeg1 macrophage expressed 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:37347855)		 UniProt
RGD		 PMID:37347855 GO_REF:0000024 NCBI chr 1:209,452,176...209,456,692
Ensembl chr 1:209,452,133...209,458,855 		JBrowse link
G RT1-CE16 RT1 class I, locus CE16 involved_in ISO (PMID:12138174), (PMID:7504010) RGD PMID:7504010 PMID:12138174 NCBI chr20:3,257,109...3,260,747
Ensembl chr20:3,257,123...3,279,563 		JBrowse link
antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tapbp TAP binding protein involved_in
acts_upstream_of_or_within		 ISO (PMID:9716645) RGD PMID:9716645 NCBI chr20:4,956,937...4,966,191
Ensembl chr20:4,956,937...4,966,181 		JBrowse link
antigen processing and presentation of exogenous peptide antigen via MHC class Ib term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RT1-A2 RT1 class Ia, locus A2 involved_in ISO (PMID:20195504), (PMID:30087334) RGD PMID:20195504 PMID:30087334 NCBI chr20:4,870,939...4,910,183 JBrowse link
G RT1-CE5 RT1 class I, locus CE5 involved_in ISO (PMID:23851683) RGD PMID:23851683 NCBI chr20:3,403,418...3,479,476 JBrowse link
G RT1-M3-1 RT1 class Ib, locus M3, gene 1 acts_upstream_of_or_within ISO (PMID:16461341) RGD PMID:16461341 NCBI chr20:1,323,976...1,328,126
Ensembl chr20:1,287,521...1,328,117 		JBrowse link
antigen processing and presentation of exogenous peptide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2m beta-2 microglobulin involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:109,095,740...109,101,764
Ensembl chr 3:109,095,729...109,101,766 		JBrowse link
G Cd74 CD74 molecule acts_upstream_of_or_within ISO MGI:1927205 (PMID:7679955), (PMID:8598040) RGD PMID:7679955 PMID:8598040 NCBI chr18:54,256,757...54,266,003
Ensembl chr18:54,256,778...54,266,003 		JBrowse link
G Ctse cathepsin E involved_in ISO
IBA
IDA		 (PMID:8765029)
(PMID:11719510)
GO_REF:0000033
PMID:8491674		 RGD
GO_Central		 PMID:8765029 PMID:11719510 PMID:8491674 GO_REF:0000033, RGD:8553254 NCBI chr13:43,091,954...43,114,509
Ensembl chr13:43,092,128...43,114,502 		JBrowse link
G Ctss cathepsin S involved_in ISO
IEA
ISS		 (PMID:30612035)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:30612035 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:183,086,437...183,114,483
Ensembl chr 2:183,086,437...183,114,483 		JBrowse link
G ENSRNOG00000070540 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr11:81,944,458...81,946,438 JBrowse link
G Fcer1g Fc epsilon receptor Ig involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:1857165 (PMID:14643301)		 GO_Central
RGD		 PMID:14643301 GO_REF:0000033 NCBI chr13:83,649,447...83,654,248
Ensembl chr13:83,649,449...83,671,443 		JBrowse link
G Fcgr2b Fc gamma receptor 2B acts_upstream_of_or_within ISO MGI:1857166 (PMID:14643301) RGD PMID:14643301 NCBI chr13:83,191,253...83,207,778
Ensembl chr13:83,193,163...83,207,778 		JBrowse link
G Ifi30 IFI30, lysosomal thiol reductase acts_upstream_of_or_within ISO MGI:2178559 (PMID:11701933) RGD PMID:11701933 NCBI chr16:18,675,590...18,679,655
Ensembl chr16:18,675,613...18,681,175 		JBrowse link
G Ighe immunoglobulin heavy constant epsilon involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G Lgmn legumain involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:9872320)		 UniProt
Ensembl
RGD		 PMID:9872320 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:121,544,048...121,582,495
Ensembl chr 6:121,544,053...121,582,480 		JBrowse link
G Pikfyve phosphoinositide kinase, FYVE-type zinc finger containing involved_in ISO (PMID:30612035) RGD PMID:30612035 NCBI chr 9:66,563,747...66,657,873
Ensembl chr 9:66,563,727...66,657,868 		JBrowse link
G RT1-B RT1 class II, locus B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G RT1-Ba RT1 class II, locus Ba involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 GO_REF:0000107
GO_REF:0000033
(PMID:11027433), (PMID:11069069), (PMID:11714799), (PMID:7679955), (PMID:8598040), (PMID:8598041), (PMID:9432982), (PMID:9492004)		 Ensembl
GO_Central
RGD		 PMID:7679955 PMID:8598040 PMID:8598041 PMID:9432982 PMID:9492004 More... GO_REF:0000033 GO_REF:0000107 NCBI chr20:4,575,134...4,579,727
Ensembl chr20:4,575,134...4,579,744 		JBrowse link
G RT1-Bb RT1 class II, locus Bb involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:32341563)
GO_REF:0000033
(PMID:11027433), (PMID:11069069), (PMID:11714799), (PMID:7679955), (PMID:8598040), (PMID:8598041), (PMID:9432982), (PMID:9492004)		 RGD
GO_Central		 PMID:7679955 PMID:8598040 PMID:8598041 PMID:9432982 PMID:9492004 More... GO_REF:0000033 NCBI chr20:4,596,558...4,602,201
Ensembl chr20:4,596,559...4,607,597 		JBrowse link
G RT1-Da RT1 class II, locus Da involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:15265931)
GO_REF:0000033
(PMID:11027433), (PMID:11714799)		 RGD
GO_Central		 PMID:11027433 PMID:11714799 PMID:15265931 GO_REF:0000033 NCBI chr20:4,513,464...4,518,457
Ensembl chr20:4,512,911...4,518,455 		JBrowse link
G RT1-Db1 RT1 class II, locus Db1 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:15265931), (PMID:32341563)
GO_REF:0000033
(PMID:11027433), (PMID:11714799)		 RGD
GO_Central		 PMID:11027433 PMID:11714799 PMID:15265931 PMID:32341563 GO_REF:0000033 NCBI chr20:4,548,664...4,558,237
Ensembl chr20:4,548,666...4,558,258 		JBrowse link
G RT1-Db2 RT1 class II, locus Db2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:4,520,723...4,539,724
Ensembl chr20:4,520,713...4,539,705 		JBrowse link
G RT1-DMa RT1 class II, locus DMa acts_upstream_of_or_within
involved_in		 ISO
IBA		 MGI:1861933|MGI:2384509|MGI:2652160 (PMID:11027433), (PMID:11714799), (PMID:8598040), (PMID:8598041)
GO_REF:0000033		 RGD
GO_Central		 PMID:8598040 PMID:8598041 PMID:11027433 PMID:11714799 GO_REF:0000033 NCBI chr20:4,707,028...4,710,432
Ensembl chr20:4,707,028...4,710,432 		JBrowse link
G RT1-DMb RT1 class II, locus DMb involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:8139689)
GO_REF:0000033
(PMID:11027433)		 RGD
GO_Central		 PMID:8139689 PMID:11027433 GO_REF:0000033 NCBI chr20:4,693,102...4,700,340
Ensembl chr20:4,693,103...4,700,340 		JBrowse link
G RT1-DOa RT1 class II, locus DOa acts_upstream_of_or_within ISO MGI:2675254 (PMID:9492004) RGD PMID:9492004 NCBI chr20:4,753,587...4,756,590
Ensembl chr20:4,753,598...4,756,577 		JBrowse link
G RT1-DOb RT1 class II, locus DOb involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:4,619,418...4,625,627
Ensembl chr20:4,619,816...4,625,667 		JBrowse link
G RT1-Ha RT1 class II, locus Ha involved_in ISO
IBA		 (PMID:20356827)
GO_REF:0000033		 RGD
GO_Central		 PMID:20356827 GO_REF:0000033 NCBI chr20:4,760,631...4,770,662
Ensembl chr20:4,760,118...4,770,244 		JBrowse link
G RT1-Hb-ps1 RT1 class II, locus Hb, pseudogene 1 involved_in ISO
IBA		 (PMID:20356827), (PMID:32341563)
GO_REF:0000033		 RGD
GO_Central		 PMID:20356827 PMID:32341563 GO_REF:0000033 NCBI chr20:4,775,598...4,779,590
Ensembl chr20:4,774,650...4,780,618 		JBrowse link
G Traf6 TNF receptor associated factor 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2678775 (PMID:14499111)		 Ensembl
RGD		 PMID:14499111 GO_REF:0000107 NCBI chr 3:87,963,517...87,988,316
Ensembl chr 3:87,963,514...87,983,507 		JBrowse link
G Unc93b1 unc-93 homolog B1, TLR signaling regulator acts_upstream_of_or_within ISO MGI:3619211 (PMID:16415873) RGD PMID:16415873 NCBI chr 1:201,167,388...201,178,343
Ensembl chr 1:201,152,693...201,178,338 		JBrowse link
antigen processing and presentation of exogenous protein antigen via MHC class Ib, TAP-dependent term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2m beta-2 microglobulin acts_upstream_of_or_within ISO (PMID:16299293) RGD PMID:16299293 NCBI chr 3:109,095,740...109,101,764
Ensembl chr 3:109,095,729...109,101,766 		JBrowse link
G RT1-M3-1 RT1 class Ib, locus M3, gene 1 acts_upstream_of_or_within ISO (PMID:16299293) RGD PMID:16299293 NCBI chr20:1,323,976...1,328,126
Ensembl chr20:1,287,521...1,328,117 		JBrowse link
G Tap2 transporter 2, ATP binding cassette subfamily B member involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:16299293)		 Ensembl
RGD		 PMID:16299293 GO_REF:0000107 NCBI chr20:4,636,347...4,650,387
Ensembl chr20:4,636,357...4,650,407 		JBrowse link
antigen processing and presentation of peptide antigen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctsl cathepsin L involved_in ISS
ISO		 GO_REF:0000024
(PMID:12021314), (PMID:9545226)		 UniProt
RGD		 PMID:9545226 PMID:12021314 GO_REF:0000024 NCBI chr17:764,370...770,533
Ensembl chr17:764,309...770,548 		JBrowse link
G Ctss cathepsin S involved_in ISO (PMID:8612130) RGD PMID:8612130 NCBI chr 2:183,086,437...183,114,483
Ensembl chr 2:183,086,437...183,114,483 		JBrowse link
G RT1-Ba RT1 class II, locus Ba acts_upstream_of_or_within ISO (PMID:11069069) RGD PMID:11069069 NCBI chr20:4,575,134...4,579,727
Ensembl chr20:4,575,134...4,579,744 		JBrowse link
G RT1-Bb RT1 class II, locus Bb acts_upstream_of_or_within ISO (PMID:11069069) RGD PMID:11069069 NCBI chr20:4,596,558...4,602,201
Ensembl chr20:4,596,559...4,607,597 		JBrowse link
G Slc11a1 solute carrier family 11 member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857756 (PMID:17620357)		 Ensembl
RGD		 PMID:17620357 GO_REF:0000107 NCBI chr 9:75,957,193...75,968,115
Ensembl chr 9:75,957,316...75,968,101 		JBrowse link
antigen processing and presentation of peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07044397.1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr20:2,496,605...2,497,428 JBrowse link
G Abcb9 ATP binding cassette subfamily B member 9 NOT|involved_in ISO (PMID:17977821) RGD PMID:17977821 NCBI chr12:32,499,213...32,531,932
Ensembl chr12:32,499,225...32,531,931 		JBrowse link
G Mr1 major histocompatibility complex, class I-related involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr13:67,298,362...67,317,985
Ensembl chr13:67,299,585...67,317,970 		JBrowse link
G RT1-CE2 RT1 class I, locus CE2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:3,538,452...3,541,841
Ensembl chr20:3,537,809...3,541,790 		JBrowse link
G RT1-O1 RT1 class Ib, locus O1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:2,655,116...2,657,520
Ensembl chr20:2,655,116...2,657,520 		JBrowse link
G RT1-S2 RT1 class Ib, locus S2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:2,650,233...2,651,654
Ensembl chr20:2,649,964...2,652,027 		JBrowse link
antigen processing and presentation of peptide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Marchf1 membrane associated ring-CH-type finger 1 involved_in ISO
IBA		 (PMID:18389477)
(PMID:17255932), (PMID:19917682)
GO_REF:0000033		 RGD
GO_Central		 PMID:17255932 PMID:18389477 PMID:19917682 GO_REF:0000033 NCBI chr16:23,255,551...24,114,290
Ensembl chr16:23,258,799...24,114,277 		JBrowse link
G Marchf8 membrane associated ring-CH-type finger 8 involved_in IBA
ISO		 GO_REF:0000033
(PMID:16785530)		 GO_Central
RGD		 PMID:16785530 GO_REF:0000033 NCBI chr 4:149,415,642...149,530,771
Ensembl chr 4:149,416,071...149,530,770 		JBrowse link
antigen processing and presentation of peptide or polysaccharide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RT1-Ba RT1 class II, locus Ba involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:4,575,134...4,579,727
Ensembl chr20:4,575,134...4,579,744 		JBrowse link
G RT1-Bb RT1 class II, locus Bb involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:4,596,558...4,602,201
Ensembl chr20:4,596,559...4,607,597 		JBrowse link
G RT1-Da RT1 class II, locus Da involved_in ISO (PMID:21502329) RGD PMID:21502329 NCBI chr20:4,513,464...4,518,457
Ensembl chr20:4,512,911...4,518,455 		JBrowse link
G RT1-Db1 RT1 class II, locus Db1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:4,548,664...4,558,237
Ensembl chr20:4,548,666...4,558,258 		JBrowse link
antigen processing and presentation of polysaccharide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl8b ARF like GTPase 8B involved_in ISS
ISO		 GO_REF:0000024
(PMID:25637027)		 UniProt
RGD		 PMID:25637027 GO_REF:0000024 NCBI chr 4:141,748,634...141,792,605
Ensembl chr 4:141,748,587...141,792,596 		JBrowse link
antigen processing and presentation, endogenous lipid antigen via MHC class Ib term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd1d1 CD1d1 molecule involved_in ISO
IBA		 (PMID:10523605)
GO_REF:0000033		 RGD
GO_Central		 PMID:10523605 GO_REF:0000033 NCBI chr 2:172,423,582...172,427,089
Ensembl chr 2:172,423,582...172,427,089 		JBrowse link
antigen processing and presentation, exogenous lipid antigen via MHC class Ib term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap3b1 adaptor related protein complex 3 subunit beta 1 acts_upstream_of_or_within ISO MGI:1856989 (PMID:14557411) RGD PMID:14557411 NCBI chr 2:25,600,069...25,800,937
Ensembl chr 2:25,600,040...25,800,935 		JBrowse link
G Ap3d1 adaptor related protein complex 3 subunit delta 1 acts_upstream_of_or_within ISO MGI:1856083 (PMID:14557411) RGD PMID:14557411 NCBI chr 7:8,970,249...9,005,651
Ensembl chr 7:8,970,291...9,005,643 		JBrowse link
G Cd1d1 CD1d1 molecule involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:14557411)		 GO_Central
RGD		 PMID:14557411 GO_REF:0000033 NCBI chr 2:172,423,582...172,427,089
Ensembl chr 2:172,423,582...172,427,089 		JBrowse link
B cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fcer2 Fc epsilon receptor II involved_in ISO (PMID:2167225) RGD PMID:2167225 NCBI chr12:1,742,809...1,754,476
Ensembl chr12:1,742,815...1,754,476 		JBrowse link
G Ighe immunoglobulin heavy constant epsilon involved_in ISO (PMID:2167225) RGD PMID:2167225
dendritic cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fcgr3a Fc gamma receptor 3A involved_in ISO (PMID:28389502) RGD PMID:28389502 NCBI chr13:83,249,905...83,259,921
Ensembl chr13:83,249,872...83,259,921 		JBrowse link
G Mpeg1 macrophage expressed 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:37347855)		 UniProt
RGD		 PMID:37347855 GO_REF:0000024 NCBI chr 1:209,452,176...209,456,692
Ensembl chr 1:209,452,133...209,458,855 		JBrowse link
G Washc1 WASH complex subunit 1 involved_in ISO (PMID:24886983) RGD PMID:24886983 NCBI chr 9:105,722,779...105,830,836
Ensembl chr 9:105,722,899...105,733,009 		JBrowse link
myeloid dendritic cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RT1-Da RT1 class II, locus Da involved_in ISO (PMID:29884618) RGD PMID:29884618 NCBI chr20:4,513,464...4,518,457
Ensembl chr20:4,512,911...4,518,455 		JBrowse link
G RT1-Db1 RT1 class II, locus Db1 involved_in ISO (PMID:29884618), (PMID:30282837) RGD PMID:29884618 PMID:30282837 NCBI chr20:4,548,664...4,558,237
Ensembl chr20:4,548,666...4,558,258 		JBrowse link
negative regulation of antigen processing and presentation of endogenous peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hfe homeostatic iron regulator involved_in ISO UniProtKB:P04439 (PMID:24643698) RGD PMID:24643698 NCBI chr17:41,413,451...41,421,502
Ensembl chr17:41,413,451...41,421,502 		JBrowse link
negative regulation of antigen processing and presentation of peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tapbpl TAP binding protein-like involved_in ISO (PMID:23401559) RGD PMID:23401559 NCBI chr 4:158,021,454...158,028,905 JBrowse link
negative regulation of antigen processing and presentation of peptide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RT1-DOa RT1 class II, locus DOa involved_in ISO (PMID:22733780) RGD PMID:22733780 NCBI chr20:4,753,587...4,756,590
Ensembl chr20:4,753,598...4,756,577 		JBrowse link
G RT1-DOb RT1 class II, locus DOb involved_in ISO (PMID:22733780) RGD PMID:22733780 NCBI chr20:4,619,418...4,625,627
Ensembl chr20:4,619,816...4,625,667 		JBrowse link
negative regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Thbs1 thrombospondin 1 involved_in ISO (PMID:16882710) RGD PMID:16882710 NCBI chr 3:105,056,293...105,071,445
Ensembl chr 3:105,056,292...105,071,440 		JBrowse link
negative regulation of dendritic cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd68 Cd68 molecule involved_in ISO (PMID:21572087) RGD PMID:21572087 NCBI chr10:54,381,814...54,383,693
Ensembl chr10:54,381,815...54,383,697 		JBrowse link
G Fgl2 fibrinogen-like 2 acts_upstream_of_or_within ISO MGI:3582343 (PMID:29341118) RGD PMID:29341118 NCBI chr 4:13,710,566...13,716,207
Ensembl chr 4:13,710,575...13,716,207 		JBrowse link
G Mir155hg Mir155 host gene involved_in ISO (PMID:32671205) RGD PMID:32671205 NCBI chr11:23,773,468...23,775,697 JBrowse link
G Thbs1 thrombospondin 1 involved_in ISO (PMID:16882710) RGD PMID:16882710 NCBI chr 3:105,056,293...105,071,445
Ensembl chr 3:105,056,292...105,071,440 		JBrowse link
negative regulation of macrophage antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgl2 fibrinogen-like 2 acts_upstream_of_or_within ISO MGI:3582343 (PMID:29341118) RGD PMID:29341118 NCBI chr 4:13,710,566...13,716,207
Ensembl chr 4:13,710,575...13,716,207 		JBrowse link
peptide antigen assembly with MHC class I protein complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2m beta-2 microglobulin involved_in IEA
ISO		 GO_REF:0000107
(PMID:36104323)		 Ensembl
RGD		 PMID:36104323 GO_REF:0000107 NCBI chr 3:109,095,740...109,101,764
Ensembl chr 3:109,095,729...109,101,766 		JBrowse link
G Calr calreticulin involved_in ISO (PMID:35948544)
(PMID:11825569)		 RGD PMID:11825569 PMID:35948544 NCBI chr19:23,308,525...23,313,420
Ensembl chr19:23,308,351...23,313,414 		JBrowse link
G Pdia3 protein disulfide isomerase family A, member 3 involved_in ISO
IEA		 (PMID:17603487)
GO_REF:0000107		 RGD
Ensembl		 PMID:17603487 GO_REF:0000107 NCBI chr 3:108,388,189...108,412,013
Ensembl chr 3:108,388,245...108,413,236 		JBrowse link
G RT1-CE16 RT1 class I, locus CE16 involved_in ISO (PMID:36104323) RGD PMID:36104323 NCBI chr20:3,257,109...3,260,747
Ensembl chr20:3,257,123...3,279,563 		JBrowse link
G Tapbp TAP binding protein involved_in ISO
IBA		 (PMID:10636848), (PMID:17603487)
GO_REF:0000033		 RGD
GO_Central		 PMID:10636848 PMID:17603487 GO_REF:0000033 NCBI chr20:4,956,937...4,966,191
Ensembl chr20:4,956,937...4,966,181 		JBrowse link
G Tapbpl TAP binding protein-like involved_in ISO (PMID:26869717) RGD PMID:26869717 NCBI chr 4:158,021,454...158,028,905 JBrowse link
peptide antigen assembly with MHC class II protein complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2m beta-2 microglobulin involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:109,095,740...109,101,764
Ensembl chr 3:109,095,729...109,101,766 		JBrowse link
G ENSRNOG00000070540 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr11:81,944,458...81,946,438 JBrowse link
G Ighe immunoglobulin heavy constant epsilon involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G RT1-B RT1 class II, locus B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G RT1-Ba RT1 class II, locus Ba involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:4,575,134...4,579,727
Ensembl chr20:4,575,134...4,579,744 		JBrowse link
G RT1-Bb RT1 class II, locus Bb involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:4,596,558...4,602,201
Ensembl chr20:4,596,559...4,607,597 		JBrowse link
G RT1-Da RT1 class II, locus Da involved_in ISO
IBA		 (PMID:1448172), (PMID:22733780), (PMID:7606781)
GO_REF:0000033		 RGD
GO_Central		 PMID:1448172 PMID:7606781 PMID:22733780 GO_REF:0000033 NCBI chr20:4,513,464...4,518,457
Ensembl chr20:4,512,911...4,518,455 		JBrowse link
G RT1-Db1 RT1 class II, locus Db1 involved_in ISO
IBA		 (PMID:1448172), (PMID:22733780), (PMID:7606781)
GO_REF:0000033		 RGD
GO_Central		 PMID:1448172 PMID:7606781 PMID:22733780 GO_REF:0000033 NCBI chr20:4,548,664...4,558,237
Ensembl chr20:4,548,666...4,558,258 		JBrowse link
G RT1-Db2 RT1 class II, locus Db2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:4,520,723...4,539,724
Ensembl chr20:4,520,713...4,539,705 		JBrowse link
G RT1-DMa RT1 class II, locus DMa involved_in ISO
IBA		 (PMID:22733780), (PMID:23260142), (PMID:7606781), (PMID:9075930)
GO_REF:0000033		 RGD
GO_Central		 PMID:7606781 PMID:9075930 PMID:22733780 PMID:23260142 GO_REF:0000033 NCBI chr20:4,707,028...4,710,432
Ensembl chr20:4,707,028...4,710,432 		JBrowse link
G RT1-DMb RT1 class II, locus DMb involved_in ISO
IBA		 (PMID:22733780), (PMID:23260142), (PMID:7606781), (PMID:9075930)
GO_REF:0000033		 RGD
GO_Central		 PMID:7606781 PMID:9075930 PMID:22733780 PMID:23260142 GO_REF:0000033 NCBI chr20:4,693,102...4,700,340
Ensembl chr20:4,693,103...4,700,340 		JBrowse link
G RT1-DOb RT1 class II, locus DOb involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:4,619,418...4,625,627
Ensembl chr20:4,619,816...4,625,667 		JBrowse link
G RT1-Ha RT1 class II, locus Ha involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:4,760,631...4,770,662
Ensembl chr20:4,760,118...4,770,244 		JBrowse link
G RT1-Hb-ps1 RT1 class II, locus Hb, pseudogene 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:4,775,598...4,779,590
Ensembl chr20:4,774,650...4,780,618 		JBrowse link
peptide antigen stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tapbp TAP binding protein involved_in ISO (PMID:12594855) RGD PMID:12594855 NCBI chr20:4,956,937...4,966,191
Ensembl chr20:4,956,937...4,966,181 		JBrowse link
peptide antigen transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tap1 transporter 1, ATP binding cassette subfamily B member TAS RGD PMID:14622282 RGD:1300480 NCBI chr20:4,656,262...4,666,634
Ensembl chr20:4,656,263...4,666,901 		JBrowse link
G Tap2 transporter 2, ATP binding cassette subfamily B member involved_in TAS
IEA
ISO		 GO_REF:0000107
(PMID:1538751), (PMID:8496691)		 Ensembl
RGD		 PMID:1538751 PMID:8496691 PMID:14622282 GO_REF:0000107, RGD:1300480 NCBI chr20:4,636,347...4,650,387
Ensembl chr20:4,636,357...4,650,407 		JBrowse link
plasmacytoid dendritic cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec4a C-type lectin domain family 4, member A involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 4:156,340,439...156,434,212
Ensembl chr 4:156,414,688...156,432,402 		JBrowse link
G Clec4a3 C-type lectin domain family 4, member A3 involved_in ISO (PMID:18258799), (PMID:20530286) RGD PMID:18258799 PMID:20530286 NCBI chr 4:156,214,030...156,224,818
Ensembl chr 4:156,214,718...156,224,817 		JBrowse link
positive regulation of antigen processing and presentation of peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tap2 transporter 2, ATP binding cassette subfamily B member IMP RGD PMID:1758495 RGD:1299069 NCBI chr20:4,636,347...4,650,387
Ensembl chr20:4,636,357...4,650,407 		JBrowse link
positive regulation of antigen processing and presentation of peptide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pycard PYD and CARD domain containing involved_in ISO (PMID:21892172) RGD PMID:21892172 NCBI chr 1:182,601,657...182,603,013
Ensembl chr 1:182,601,174...182,602,955 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:11602640) RGD PMID:11602640 NCBI chr 9:12,647,605...12,654,190
Ensembl chr 9:12,647,259...12,654,170 		JBrowse link
positive regulation of dendritic cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl19 C-C motif chemokine ligand 19 involved_in ISO (PMID:15845453) RGD PMID:15845453 NCBI chr 5:56,963,364...56,965,308
Ensembl chr 5:56,963,364...56,965,308 		JBrowse link
G Ccl21 C-C motif chemokine ligand 21 involved_in ISO (PMID:15845453) RGD PMID:15845453 NCBI chr 5:56,980,557...56,981,661
Ensembl chr 5:56,980,558...56,981,686 		JBrowse link
G Ccr7 C-C motif chemokine receptor 7 involved_in ISO (PMID:15845453) RGD PMID:15845453 NCBI chr10:84,098,193...84,108,309
Ensembl chr10:84,097,381...84,108,309 		JBrowse link
G Cd74 CD74 molecule involved_in ISS
ISO		 GO_REF:0000024
(PMID:18003616)		 BHF-UCL
RGD		 PMID:18003616 GO_REF:0000024 NCBI chr18:54,256,757...54,266,003
Ensembl chr18:54,256,778...54,266,003 		JBrowse link
G Nod1 nucleotide-binding oligomerization domain containing 1 involved_in ISO (PMID:20008287) RGD PMID:20008287 NCBI chr 4:84,060,871...84,111,668
Ensembl chr 4:84,060,880...84,111,404 		JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 involved_in ISO (PMID:20008287) RGD PMID:20008287 NCBI chr19:18,382,369...18,422,817
Ensembl chr19:18,382,439...18,417,177 		JBrowse link
G Slc11a1 solute carrier family 11 member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:18984740)		 Ensembl
RGD		 PMID:18984740 GO_REF:0000107 NCBI chr 9:75,957,193...75,968,115
Ensembl chr 9:75,957,316...75,968,101 		JBrowse link
positive regulation of macrophage antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fam3d FAM3 metabolism regulating signaling molecule D acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:29853563)
GO_REF:0000107		 RGD
Ensembl		 PMID:29853563 GO_REF:0000107 NCBI chr15:16,538,881...16,574,468
Ensembl chr15:16,539,489...16,573,034 		JBrowse link
regulation of antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cst7 cystatin F acts_upstream_of ISO (PMID:22365146) RGD PMID:22365146 NCBI chr 3:139,396,830...139,405,557
Ensembl chr 3:139,396,850...139,405,557 		JBrowse link
G Ctss cathepsin S involved_in ISO (PMID:22365146) RGD PMID:22365146 NCBI chr 2:183,086,437...183,114,483
Ensembl chr 2:183,086,437...183,114,483 		JBrowse link
G Ptpn22 protein tyrosine phosphatase, non-receptor type 22 NOT|involved_in ISO (PMID:23871208) RGD PMID:23871208 NCBI chr 2:191,366,761...191,414,782
Ensembl chr 2:191,366,808...191,414,779 		JBrowse link
G Ythdf1 YTH N6-methyladenosine RNA binding protein F1 involved_in ISO (PMID:30728504) RGD PMID:30728504 NCBI chr 3:168,024,660...168,040,172
Ensembl chr 3:168,024,663...168,040,172 		JBrowse link
regulation of T cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Was WASP actin nucleation promoting factor involved_in ISO (PMID:22804504) RGD PMID:22804504 NCBI chr  X:14,405,105...14,413,850
Ensembl chr  X:14,405,124...14,413,849 		JBrowse link
T cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Icam1 intercellular adhesion molecule 1 acts_upstream_of_or_within ISO (PMID:2479693) RGD PMID:2479693 NCBI chr 8:19,553,063...19,565,438
Ensembl chr 8:19,553,645...19,565,438 		JBrowse link
G Kdm5d lysine demethylase 5D acts_upstream_of_or_within ISO (PMID:16301625) RGD PMID:16301625 NCBI chr  Y:527,069...624,019
Ensembl chr  Y:530,401...624,018 		JBrowse link
G Rftn1 raftlin lipid raft linker 1 involved_in ISO (PMID:19414744) RGD PMID:19414744 NCBI chr 9:10,804,611...11,002,084
Ensembl chr 9:10,804,611...11,002,084 		JBrowse link
G Treml4 triggering receptor expressed on myeloid cells-like 4 acts_upstream_of_or_within ISO (PMID:22210914) RGD PMID:22210914 NCBI chr 9:12,718,968...12,743,879
Ensembl chr 9:12,721,815...12,743,253 		JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO MGI:3052754 (PMID:24218451) RGD PMID:24218451 NCBI chr 8:109,706,613...109,707,913
Ensembl chr 8:109,706,613...109,708,796 		JBrowse link
G Unc93b1 unc-93 homolog B1, TLR signaling regulator acts_upstream_of_or_within ISO MGI:3619211 (PMID:16415873) RGD PMID:16415873 NCBI chr 1:201,167,388...201,178,343
Ensembl chr 1:201,152,693...201,178,338 		JBrowse link
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