ONTOLOGY REPORT - ANNOTATIONS
Term: vitamin binding
Accession: GO:0019842
browse the term
Definition: Binding to a vitamin, one of a number of unrelated organic substances that occur in many foods in small amounts and that are necessary in trace amounts for the normal metabolic functioning of the body.
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Cblif
cobalamin binding intrinsic factor
TAS
RGD
PMID:3422425
RGD:61608
NCBI chr 1:208,605,983...208,620,231
Ensembl chr 1:208,605,983...208,620,344
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Ggcx
gamma-glutamyl carboxylase
enables
IDA IBA
GO_REF:0000033
GO_Central RGD
PMID:12754193
GO_REF:0000033, RGD:1582507
NCBI chr 4:104,469,737...104,485,631
Ensembl chr 4:104,469,765...104,487,063
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Pank3
pantothenate kinase 3
enables
ISO
(PMID:27555321)
RGD
PMID:27555321
NCBI chr10:20,229,129...20,252,955
Ensembl chr10:20,229,129...20,252,955
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Pygl
glycogen phosphorylase L
enables
ISO
(PMID:12204691)
RGD
PMID:12204691
NCBI chr 6:88,697,598...88,740,260
Ensembl chr 6:88,697,593...88,740,310
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Ttpa
alpha tocopherol transfer protein
IDA
RGD
PMID:8349655
RGD:730016
NCBI chr 5:33,497,537...33,518,936
Ensembl chr 5:33,497,137...33,518,073
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Abca4
ATP binding cassette subfamily A member 4
enables
ISO
(PMID:23144455)
RGD
PMID:23144455
NCBI chr 2:210,164,813...210,302,069
Ensembl chr 2:210,164,813...210,302,069
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Opn3
opsin 3
enables
ISO
(PMID:31097585)
RGD
PMID:31097585
NCBI chr13:87,589,333...87,619,847
Ensembl chr13:87,589,333...87,619,847
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Opn4
opsin 4
enables
ISO ISS
(PMID:15674244) GO_REF:0000024
RGD UniProt
PMID:15674244
GO_REF:0000024
NCBI chr16:9,920,408...9,929,580
Ensembl chr16:9,920,491...10,005,711
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Opn5
opsin 5
enables
ISO
(PMID:22043319) (PMID:22043319), (PMID:24403072)
RGD
PMID:22043319 PMID:24403072
NCBI chr 9:18,368,393...18,416,098
Ensembl chr 9:18,368,416...18,415,476
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Rho
rhodopsin
enables
ISS
GO_REF:0000024
UniProt
GO_REF:0000024
NCBI chr 4:148,975,597...148,988,693
Ensembl chr 4:148,980,611...148,985,773
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Rlbp1
retinaldehyde binding protein 1
enables
ISO
(PMID:9326942)
RGD
PMID:9326942
NCBI chr 1:133,308,920...133,322,296
Ensembl chr 1:133,308,938...133,322,296
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Abca4
ATP binding cassette subfamily A member 4
enables
ISO
(PMID:20404325), (PMID:29847635), (PMID:33375396)
RGD
PMID:20404325 PMID:29847635 PMID:33375396
NCBI chr 2:210,164,813...210,302,069
Ensembl chr 2:210,164,813...210,302,069
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Adh4
alcohol dehydrogenase 4 (class II), pi polypeptide
enables
ISO
(PMID:15369820)
RGD
PMID:15369820
NCBI chr 2:226,948,717...226,966,747
Ensembl chr 2:226,947,466...226,987,591
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Cyp2w1
cytochrome P450, family 2, subfamily w, polypeptide 1
enables
ISO
(PMID:26936974)
RGD
PMID:26936974
NCBI chr12:15,291,552...15,296,421
Ensembl chr12:15,291,704...15,296,421
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Opn3
opsin 3
enables
ISO
(PMID:31097585)
RGD
PMID:31097585
NCBI chr13:87,589,333...87,619,847
Ensembl chr13:87,589,333...87,619,847
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Cyp2w1
cytochrome P450, family 2, subfamily w, polypeptide 1
enables
ISO
(PMID:26936974)
RGD
PMID:26936974
NCBI chr12:15,291,552...15,296,421
Ensembl chr12:15,291,704...15,296,421
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Rbp1
retinol binding protein 1
enables
ISO ISS IBA
(PMID:28057518) GO_REF:0000024 MGI:87921 (PMID:15193143), (PMID:23362116) GO_REF:0000033
RGD UniProt GO_Central
PMID:15193143 PMID:23362116 PMID:28057518
GO_REF:0000024 GO_REF:0000033
NCBI chr 8:99,025,218...99,046,740
Ensembl chr 8:99,025,206...99,046,743
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Acaca
acetyl-CoA carboxylase alpha
IDA
RGD
PMID:12949377
RGD:1601566
NCBI chr10:69,014,261...69,276,453
Ensembl chr10:69,014,170...69,276,457
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Acacb
acetyl-CoA carboxylase beta
IDA
RGD
PMID:12949377
RGD:1601566
NCBI chr12:42,365,800...42,477,651
Ensembl chr12:42,366,548...42,457,655
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Hlcs
holocarboxylase synthetase
enables
ISO
(PMID:14613969)
RGD
PMID:14613969
NCBI chr11:33,455,806...33,635,197
Ensembl chr11:33,455,809...33,624,222
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Pc
pyruvate carboxylase
IMP IDA
RGD
PMID:12949377 PMID:12949377
RGD:1601566 , RGD:1601566
NCBI chr 1:201,799,374...201,898,412
Ensembl chr 1:201,804,267...201,898,380
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Gc
GC, vitamin D binding protein
enables
ISO IEA
(PMID:11799400) GO_REF:0000107
RGD Ensembl
PMID:11799400
GO_REF:0000107
NCBI chr14:18,632,146...18,667,563
Ensembl chr14:18,632,135...18,667,567
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Vdr
vitamin D receptor
enables
IDA IEA ISO
GO_REF:0000107 (PMID:10678179), (PMID:12016314), (PMID:28698609)
Ensembl RGD
PMID:10678179 PMID:12016314 PMID:28698609 PMID:8179318
GO_REF:0000107, RGD:8158087
NCBI chr 7:128,987,981...129,037,677
Ensembl chr 7:128,987,981...129,037,677
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Cblif
cobalamin binding intrinsic factor
enables
IDA ISO IBA IEA
(PMID:14321840) GO_REF:0000033 GO_REF:0000107 (PMID:14695536)
RGD GO_Central Ensembl
PMID:14321840 PMID:14695536 PMID:7150665
GO_REF:0000033 GO_REF:0000107, RGD:1624372
NCBI chr 1:208,605,983...208,620,231
Ensembl chr 1:208,605,983...208,620,344
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Cd320
CD320 molecule
enables
ISO
(PMID:18779389)
RGD
PMID:18779389
NCBI chr 7:14,626,171...14,631,976
Ensembl chr 7:14,609,146...14,631,976
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Cubn
cubilin
enables
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr17:76,385,046...76,593,133
Ensembl chr17:76,385,060...76,593,231
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Lmbrd1
LMBR1 domain containing 1
enables
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr 9:27,096,387...27,178,095
Ensembl chr 9:27,096,297...27,178,090
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Mmab
metabolism of cobalamin associated B
enables
ISO
(PMID:28497574)
RGD
PMID:28497574
NCBI chr12:42,159,109...42,172,518
Ensembl chr12:42,159,089...42,172,490
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Mmachc
metabolism of cobalamin associated C
enables
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr 5:130,166,056...130,172,735
Ensembl chr 5:130,166,451...130,172,601
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Mmut
methylmalonyl-CoA mutase
enables
ISO IBA
(PMID:1978672), (PMID:20876572), (PMID:21138732), (PMID:28943303) GO_REF:0000033
RGD GO_Central
PMID:1978672 PMID:20876572 PMID:21138732 PMID:28943303
GO_REF:0000033
NCBI chr 9:19,928,720...19,956,985
Ensembl chr 9:19,928,727...19,957,046
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Mtr
5-methyltetrahydrofolate-homocysteine methyltransferase
enables
TAS IEA
GO_REF:0000104
UniProt RGD
PMID:15845641
GO_REF:0000104, RGD:1359026
NCBI chr17:58,219,998...58,308,560
Ensembl chr17:58,220,071...58,304,822
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Tcn2
transcobalamin 2
enables
IDA ISO IBA IEA
(PMID:21655200) GO_REF:0000033 GO_REF:0000107 GO_REF:0000002 (PMID:16537422), (PMID:27411955), (PMID:8443384)
RGD GO_Central Ensembl InterPro
PMID:8443384 PMID:16537422 PMID:21655200 PMID:27411955 PMID:11287214
GO_REF:0000002 GO_REF:0000033 GO_REF:0000107, RGD:1601485
NCBI chr14:78,813,343...78,828,549
Ensembl chr14:78,813,343...78,828,489
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Cyp2r1
cytochrome P450, family 2, subfamily r, polypeptide 1
enables
ISO
(PMID:18511070)
RGD
PMID:18511070
NCBI chr 1:168,749,302...168,798,079
Ensembl chr 1:168,751,038...168,797,759
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Dhfr
dihydrofolate reductase
enables
ISO
(PMID:2303423)
RGD
PMID:2303423
NCBI chr 2:23,585,876...23,611,199
Ensembl chr 2:23,586,031...23,613,713
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Dmgdh
dimethylglycine dehydrogenase
IDA
RGD
PMID:6159630 PMID:6163778
RGD:1599787 , RGD:7245485
NCBI chr 2:24,912,600...24,987,533
Ensembl chr 2:24,912,578...24,987,528
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Folr1
folate receptor alpha
enables
ISO
(PMID:10787414), (PMID:14722620), (PMID:19116913), (PMID:23851396), (PMID:2527252)
RGD
PMID:2527252 PMID:10787414 PMID:14722620 PMID:19116913 PMID:23851396
NCBI chr 1:156,219,460...156,238,436
Ensembl chr 1:156,219,460...156,230,667
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Folr2
folate receptor beta
enables
ISO
(PMID:19116913), (PMID:25015955), (PMID:4066659)
RGD
PMID:4066659 PMID:19116913 PMID:25015955
NCBI chr 1:156,200,044...156,218,380
Ensembl chr 1:156,200,060...156,205,724
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Ftcd
formimidoyltransferase cyclodeaminase
enables
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr20:12,055,203...12,068,717
Ensembl chr20:12,055,208...12,068,735
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Gnmt
glycine N-methyltransferase
enables
TAS IEA IDA
GO_REF:0000043 PMID:22037183
UniProt RGD
PMID:8278367 PMID:22037183 PMID:17158459
GO_REF:0000043, RGD:1545057 , RGD:151356643 , RGD:7242951
NCBI chr 9:14,254,675...14,258,028
Ensembl chr 9:14,254,675...14,258,434
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Izumo1r
IZUMO1 receptor, JUNO
NOT|enables
ISO
(PMID:24739963)
RGD
PMID:24739963
NCBI chr 8:11,744,384...11,748,131
Ensembl chr 8:11,725,863...11,748,465
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Mthfs
methenyltetrahydrofolate synthetase
enables
ISO
(PMID:19738041), (PMID:7766710)
RGD
PMID:7766710 PMID:19738041
NCBI chr 8:89,729,498...89,801,998
Ensembl chr 8:89,729,508...89,799,089
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Mtr
5-methyltetrahydrofolate-homocysteine methyltransferase
IDA
RGD
PMID:11730351
RGD:1601423
NCBI chr17:58,219,998...58,308,560
Ensembl chr17:58,220,071...58,304,822
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Sardh
sarcosine dehydrogenase
IDA
RGD
PMID:6163778
RGD:7245485
NCBI chr 3:10,510,553...10,575,342
Ensembl chr 3:10,510,553...10,573,874
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Slc19a1
solute carrier family 19 member 1
enables
IDA IBA
GO_REF:0000033
GO_Central RGD
PMID:11600421
GO_REF:0000033, RGD:735239
NCBI chr20:11,584,410...11,602,429
Ensembl chr20:11,584,411...11,601,972
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Slc46a1
solute carrier family 46 member 1
enables
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr10:63,361,504...63,367,940
Ensembl chr10:63,361,486...63,368,848
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Tyms
thymidylate synthetase
IDA
RGD
PMID:7537805
RGD:2317419
NCBI chr 9:113,313,454...113,329,551
Ensembl chr 9:113,313,452...113,329,536
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Uros
uroporphyrinogen III synthase
IDA
RGD
PMID:6466301
RGD:2303402
NCBI chr 1:188,490,832...188,513,659
Ensembl chr 1:188,490,323...188,512,249
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Dbh
dopamine beta-hydroxylase
enables
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr 3:10,488,260...10,505,245
Ensembl chr 3:10,488,260...10,505,248
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Egln1
egl-9 family hypoxia-inducible factor 1
enables
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr19:52,867,900...52,907,308
Ensembl chr19:52,869,486...52,907,777
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Egln2
egl-9 family hypoxia-inducible factor 2
enables
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr 1:82,451,554...82,459,809
Ensembl chr 1:82,451,555...82,459,751
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Egln3
egl-9 family hypoxia-inducible factor 3
enables
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr 6:71,650,297...71,675,766
Ensembl chr 6:71,650,297...71,675,766
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ENSRNOG00000071188
enables
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
Ensembl chr15:4,841,915...4,842,575
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Ogfod1
2-oxoglutarate and iron-dependent oxygenase domain containing 1
enables
IEA
GO_REF:0000043 GO_REF:0000002
UniProt InterPro
GO_REF:0000002 GO_REF:0000043
NCBI chr19:10,945,031...10,974,602
Ensembl chr19:10,946,018...10,975,119
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Ogfod3
2-oxoglutarate and iron-dependent oxygenase domain containing 3
enables
IEA
GO_REF:0000043 GO_REF:0000002
UniProt InterPro
GO_REF:0000002 GO_REF:0000043
NCBI chr10:106,452,334...106,480,632
Ensembl chr10:106,452,329...106,480,134
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P3h1
prolyl 3-hydroxylase 1
enables
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr 5:132,841,868...132,856,664
Ensembl chr 5:132,841,928...132,856,659
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P3h2
prolyl 3-hydroxylase 2
enables
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr11:74,634,267...74,775,422
Ensembl chr11:74,634,267...74,775,421
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P3h3
prolyl 3-hydroxylase 3
enables
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr 4:157,646,242...157,662,035
Ensembl chr 4:157,646,243...157,662,035
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P4ha1
prolyl 4-hydroxylase subunit alpha 1
enables
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr20:27,302,046...27,352,098
Ensembl chr20:27,302,141...27,352,786
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P4ha2
prolyl 4-hydroxylase subunit alpha 2
enables
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr10:38,243,136...38,271,983
Ensembl chr10:38,243,139...38,287,314
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P4ha3
prolyl 4-hydroxylase subunit alpha 3
enables
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr 1:154,628,723...154,663,779
Ensembl chr 1:154,628,736...154,663,775
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P4htm
prolyl 4-hydroxylase, transmembrane
enables
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr 8:109,274,629...109,292,802
Ensembl chr 8:109,274,626...109,292,473
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Pam
peptidylglycine alpha-amidating monooxygenase
enables
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr 9:97,998,581...98,271,966
Ensembl chr 9:98,122,916...98,271,965
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Phyh
phytanoyl-CoA 2-hydroxylase
enables
ISO
(PMID:10744784)
RGD
PMID:10744784
NCBI chr17:73,329,461...73,346,359
Ensembl chr17:73,329,082...73,346,409
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Plod1
procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1
enables
IMP IEA
GO_REF:0000043
UniProt RGD
PMID:11714250
GO_REF:0000043, RGD:1599090
NCBI chr 5:158,340,674...158,367,581
Ensembl chr 5:158,340,490...158,367,620
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Plod2
procollagen lysine, 2-oxoglutarate 5-dioxygenase 2
enables
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr 8:93,084,548...93,167,255
Ensembl chr 8:93,084,513...93,167,255
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Plod3
procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3
enables
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr12:19,676,384...19,686,945
Ensembl chr12:19,676,386...19,686,960
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Fasn
fatty acid synthase
enables
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr10:106,072,093...106,090,259
Ensembl chr10:106,072,091...106,090,261
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Pdxk
pyridoxal kinase
IDA
RGD
PMID:6255956
RGD:2303024
NCBI chr20:10,210,276...10,232,314
Ensembl chr20:10,210,289...10,232,110
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AABR07011698.1
enables
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
Ensembl chr 2:153,941,154...153,942,719
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Aadat
aminoadipate aminotransferase
enables
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr16:29,509,392...29,544,332
Ensembl chr16:29,509,394...29,544,332
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Abat
4-aminobutyrate aminotransferase
enables
ISS IBA IEA ISO
GO_REF:0000024 GO_REF:0000033 GO_REF:0000002 (PMID:6470007) (PMID:15650327)
UniProt GO_Central InterPro RGD
PMID:6470007 PMID:15650327
GO_REF:0000002 GO_REF:0000024 GO_REF:0000033
NCBI chr10:6,996,688...7,092,835
Ensembl chr10:6,999,819...7,092,835
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Accs
1-aminocyclopropane-1-carboxylate synthase
enables
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 3:79,805,254...79,820,830
Ensembl chr 3:79,806,587...79,820,835
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Accsl
1-aminocyclopropane-1-carboxylate synthase-like
enables
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 3:79,826,464...79,841,163
Ensembl chr 3:79,826,464...79,841,163
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Agxt
alanine--glyoxylate aminotransferase
enables
ISO
(PMID:15802217), (PMID:17696873), (PMID:20133649)
RGD
PMID:15802217 PMID:17696873 PMID:20133649
NCBI chr 9:93,675,384...93,685,337
Ensembl chr 9:93,675,384...93,685,336
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Agxt2
alanine-glyoxylate aminotransferase 2
enables
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 2:59,336,252...59,377,664
Ensembl chr 2:59,336,283...59,377,926
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Alas1
5'-aminolevulinate synthase 1
enables
IEA
GO_REF:0000104 GO_REF:0000002
UniProt InterPro
GO_REF:0000002 GO_REF:0000104
NCBI chr 8:106,876,514...106,889,917
Ensembl chr 8:106,876,514...106,889,917
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Alas2
5'-aminolevulinate synthase 2
enables
IEA
GO_REF:0000002 GO_REF:0000104
InterPro UniProt
GO_REF:0000002 GO_REF:0000104
NCBI chr X:19,463,146...19,486,526
Ensembl chr X:19,463,171...19,486,519
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Alb
albumin
enables
ISS ISO IEA
GO_REF:0000024 (PMID:16201370) GO_REF:0000107
UniProt RGD Ensembl
PMID:16201370
GO_REF:0000024 GO_REF:0000107
NCBI chr14:17,607,397...17,622,814
Ensembl chr14:17,607,381...17,622,836
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Cbs
cystathionine beta synthase
enables
TAS ISO ISS
(PMID:18776696), (PMID:7929220) GO_REF:0000024
RGD UniProt
PMID:7929220 PMID:18776696 PMID:10801907
GO_REF:0000024, RGD:1359025
NCBI chr20:9,708,089...9,732,623
Ensembl chr20:9,708,090...9,732,764
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Cisd1
CDGSH iron sulfur domain 1
enables
ISS ISO
GO_REF:0000024 (PMID:36194135)
UniProt RGD
PMID:36194135
GO_REF:0000024
NCBI chr20:17,255,302...17,268,688
Ensembl chr20:17,255,151...17,284,924
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Csad
cysteine sulfinic acid decarboxylase
enables
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 7:133,308,571...133,337,914
Ensembl chr 7:133,308,574...133,337,615
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Cth
cystathionine gamma-lyase
enables
TAS ISS IEA ISO IBA
GO_REF:0000024 GO_REF:0000002 (PMID:10212249), (PMID:19019829) GO_REF:0000107 GO_REF:0000033
UniProt InterPro RGD Ensembl GO_Central
PMID:10212249 PMID:19019829 PMID:10801907
GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107, RGD:1359025
NCBI chr 2:246,975,888...247,002,234
Ensembl chr 2:246,975,894...247,002,234
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Ddc
dopa decarboxylase
enables
TAS IEA IDA
GO_REF:0000002
InterPro RGD
PMID:7567987 PMID:8422386
GO_REF:0000002, RGD:727686 , RGD:4139896
NCBI chr14:86,378,685...86,469,189
Ensembl chr14:86,378,685...86,469,208
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ENSRNOG00000064101
enables
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
Ensembl chr 3:9,679,203...9,680,482
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ENSRNOG00000065410
enables
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
Ensembl chr 2:178,497,468...178,499,169
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Etnppl
ethanolamine-phosphate phospho-lyase
enables
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 2:219,173,048...219,194,646
Ensembl chr 2:219,172,978...219,192,212
G
Gad1
glutamate decarboxylase 1
enables
IDA IEA
GO_REF:0000002
InterPro RGD
PMID:1880546
GO_REF:0000002, RGD:6480263
NCBI chr 3:55,369,704...55,410,335
Ensembl chr 3:55,369,704...55,410,333
G
Gad2
glutamate decarboxylase 2
IDA
RGD
PMID:1880546
RGD:6480263
NCBI chr17:84,763,630...84,826,155
Ensembl chr17:84,763,628...84,826,155
G
Gadl1
glutamate decarboxylase-like 1
enables
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 8:115,605,609...115,785,676
Ensembl chr 8:115,605,873...115,784,410
G
Gcat
glycine C-acetyltransferase
enables
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 7:110,595,126...110,601,474
Ensembl chr 7:110,595,091...110,601,473
G
Gldc
glycine decarboxylase
enables
IDA IBA
GO_REF:0000033
GO_Central RGD
PMID:6778858
GO_REF:0000033, RGD:1642728
NCBI chr 1:227,883,249...227,962,119
Ensembl chr 1:227,883,249...227,962,097
G
Got1
glutamic-oxaloacetic transaminase 1
enables
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 1:242,357,293...242,381,535
Ensembl chr 1:242,357,306...242,380,633
G
Got1l1
glutamic-oxaloacetic transaminase 1-like 1
enables
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr16:64,860,308...64,873,656
Ensembl chr16:64,860,704...64,866,162
G
Got2
glutamic-oxaloacetic transaminase 2
enables
IDA IEA IMP
GO_REF:0000002
InterPro RGD
PMID:14522984 PMID:12686151
GO_REF:0000002, RGD:1582383 , RGD:2289396
NCBI chr19:9,174,304...9,199,995
Ensembl chr19:9,174,311...9,199,994
G
Got2-ps6
glutamic-oxaloacetic transaminase 2, pseudogene 6
enables
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr X:60,551,686...60,552,959
Ensembl chr X:60,551,686...60,552,959
G
Gpt
glutamic--pyruvic transaminase
NAS
RGD
PMID:2043642
RGD:1625222
NCBI chr 7:108,416,646...108,419,495
Ensembl chr 7:108,416,642...108,419,494
G
Gpt2
glutamic--pyruvic transaminase 2
enables
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr19:21,526,800...21,561,314
Ensembl chr19:21,517,621...21,560,610
G
Hdc
histidine decarboxylase
enables
IDA IEA
GO_REF:0000002
InterPro RGD
PMID:4449071 PMID:9525922 PMID:12204113 PMID:14622303 PMID:7075603 PMID:5898 More...
GO_REF:0000002, RGD:2303726 , RGD:2303735 , RGD:2303734 , RGD:2303733 , RGD:2303728 , RGD:2303727
NCBI chr 3:113,847,256...113,865,334
Ensembl chr 3:113,847,260...113,865,341
G
Kyat1
kynurenine aminotransferase 1
enables
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 3:13,459,598...13,493,308
Ensembl chr 3:13,459,591...13,493,355
G
Kyat3
kynurenine aminotransferase 3
enables
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 2:231,701,881...231,747,462
Ensembl chr 2:231,701,963...231,747,227
G
Kynu
kynureninase
enables
IDA IEA
GO_REF:0000104
UniProt RGD
PMID:7451426
GO_REF:0000104, RGD:2290547
NCBI chr 3:27,778,646...27,929,470
Ensembl chr 3:27,778,772...27,929,488
G
Mocos
molybdenum cofactor sulfurase
enables
IEA
GO_REF:0000104
UniProt
GO_REF:0000104
NCBI chr18:15,931,659...15,977,415
Ensembl chr18:15,931,654...15,977,187
G
Mtarc1
mitochondrial amidoxime reducing component 1
enables
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr13:96,324,377...96,362,677
Ensembl chr13:96,339,757...96,397,796
G
Mtarc2
mitochondrial amidoxime reducing component 2
enables
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr13:96,362,810...96,397,284
G
Nfs1
NFS1 cysteine desulfurase
enables
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 3:144,637,309...144,659,660
Ensembl chr 3:144,637,309...144,659,666
G
Oat
ornithine aminotransferase
enables
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:187,347,862...187,367,644
Ensembl chr 1:187,347,865...187,367,682
G
Pdxdc1
pyridoxal-dependent decarboxylase domain containing 1
enables
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr10:2,025,056...2,113,712
Ensembl chr10:2,025,360...2,113,520
G
Phykpl
5-phosphohydroxy-L-lysine phospho-lyase
enables
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr10:35,839,965...35,863,631
Ensembl chr10:35,839,983...35,859,508
G
Plpbp
pyridoxal phosphate binding protein
enables
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr16:65,003,292...65,014,886
Ensembl chr16:65,002,223...65,014,886
G
Pnpo
pyridoxamine 5'-phosphate oxidase
enables
ISO
(PMID:12824491)
RGD
PMID:12824491
NCBI chr10:81,924,584...81,930,844
Ensembl chr10:81,924,569...81,930,871
G
Psat1
phosphoserine aminotransferase 1
enables
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:213,196,709...213,218,564
Ensembl chr 1:213,196,709...213,218,682
G
Pygb
glycogen phosphorylase B
enables
IEA IBA
GO_REF:0000002 GO_REF:0000033
InterPro GO_Central
GO_REF:0000002 GO_REF:0000033
NCBI chr 3:139,611,724...139,658,521
Ensembl chr 3:139,611,749...139,663,553
G
Pygl
glycogen phosphorylase L
enables
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 6:88,697,598...88,740,260
Ensembl chr 6:88,697,593...88,740,310
G
Pygm
glycogen phosphorylase, muscle associated
enables
IDA IBA IEA
GO_REF:0000033 GO_REF:0000002
GO_Central InterPro RGD
PMID:11692172
GO_REF:0000002 GO_REF:0000033, RGD:1599897
NCBI chr 1:203,690,550...203,705,369
Ensembl chr 1:203,690,533...203,705,368
G
Sds
serine dehydratase
enables
IEA ISO
GO_REF:0000107 (PMID:15689518), (PMID:16580895)
Ensembl RGD
PMID:15689518 PMID:16580895
GO_REF:0000107
NCBI chr12:36,083,226...36,090,540
Ensembl chr12:36,083,229...36,088,203
G
Sdsl
serine dehydratase-like
enables
IDA
PMID:33079132
UniProt
PMID:33079132
RGD:407430014
NCBI chr12:36,099,693...36,109,914
Ensembl chr12:36,099,693...36,109,906
G
Sgpl1
sphingosine-1-phosphate lyase 1
enables
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr20:29,047,793...29,094,209
Ensembl chr20:29,047,796...29,094,084
G
Shmt1
serine hydroxymethyltransferase 1
enables
TAS IBA ISO IDA
GO_REF:0000033 (PMID:17482557), (PMID:24698160)
GO_Central RGD
PMID:17482557 PMID:24698160 PMID:15671219 PMID:3110140
GO_REF:0000033, RGD:1359815 , RGD:2300383
NCBI chr10:45,468,698...45,490,833
Ensembl chr10:45,468,700...45,497,820
G
Shmt2
serine hydroxymethyltransferase 2
enables
TAS IBA ISO IDA
GO_REF:0000033 (PMID:25619277)
GO_Central RGD
PMID:25619277 PMID:15671219 PMID:3110140
GO_REF:0000033, RGD:1359815 , RGD:2300383
NCBI chr 7:63,358,961...63,364,293
Ensembl chr 7:63,358,961...63,364,236
G
Sptlc1
serine palmitoyltransferase, long chain base subunit 1
enables
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr17:11,877,249...11,916,295
Ensembl chr17:11,877,249...11,916,295
G
Sptlc2
serine palmitoyltransferase, long chain base subunit 2
enables
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 6:106,948,682...107,031,532
Ensembl chr 6:106,950,949...107,031,542
G
Sptlc3
serine palmitoyltransferase, long chain base subunit 3
enables
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 3:126,847,878...126,978,010
Ensembl chr 3:126,847,878...126,978,010
G
Srr
serine racemase
enables
IDA ISO IBA IEA
(PMID:10557334) GO_REF:0000033 GO_REF:0000002 PMID:20106978 (PMID:20106978)
RGD GO_Central InterPro
PMID:10557334 PMID:20106978 PMID:9892700 PMID:20106978
GO_REF:0000002 GO_REF:0000033, RGD:2302218 , RGD:8554326
NCBI chr10:59,769,563...59,786,688
Ensembl chr10:59,769,571...59,787,011
G
Tat
tyrosine aminotransferase
enables
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr19:37,947,153...37,957,717
Ensembl chr19:37,947,112...37,958,031
G
Thnsl2
threonine synthase-like 2
enables
IEA ISO IBA
GO_REF:0000107 (PMID:17034760) GO_REF:0000033
Ensembl RGD GO_Central
PMID:17034760
GO_REF:0000033 GO_REF:0000107
NCBI chr 4:103,112,974...103,132,122
Ensembl chr 4:103,112,963...103,132,017
G
Akr1b10
aldo-keto reductase family 1 member B10
IDA
RGD
PMID:20709016
RGD:6903952
NCBI chr 4:63,038,459...63,060,336
Ensembl chr 4:63,040,169...63,053,852
G
Aldh1a2
aldehyde dehydrogenase 1 family, member A2
IDA
RGD
PMID:8663198
RGD:724800
NCBI chr 8:71,877,850...71,957,107
Ensembl chr 8:71,877,850...71,957,107
G
Crabp1
cellular retinoic acid binding protein 1
enables
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr 8:55,138,363...55,159,360
Ensembl chr 8:55,151,285...55,159,360
G
Crabp2
cellular retinoic acid binding protein 2
enables
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr 2:173,417,004...173,421,352
Ensembl chr 2:173,416,857...173,421,379
G
Rbp1
retinol binding protein 1
enables
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr 8:99,025,218...99,046,740
Ensembl chr 8:99,025,206...99,046,743
G
Rbp2
retinol binding protein 2
enables
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr 8:99,079,293...99,104,489
Ensembl chr 8:99,079,104...99,104,473
G
Rbp4
retinol binding protein 4
enables
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr 1:235,893,917...235,901,315
Ensembl chr 1:235,893,917...235,901,399
G
Rho
rhodopsin
IDA
9-cis retinaldehyde 9-cis and 11-cis retinal
RGD
PMID:2525480 PMID:8814134
RGD:6893558 , RGD:6893595
NCBI chr 4:148,975,597...148,988,693
Ensembl chr 4:148,980,611...148,985,773
G
Stra6
signaling receptor and transporter of retinol STRA6
enables
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr 8:58,548,899...58,568,861
Ensembl chr 8:58,549,736...58,568,860
G
Adh4
alcohol dehydrogenase 4 (class II), pi polypeptide
enables
ISO
(PMID:10407146)
RGD
PMID:10407146
NCBI chr 2:226,948,717...226,966,747
Ensembl chr 2:226,947,466...226,987,591
G
Adh7
alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide
enables
IDA ISO
(PMID:9228021)
RGD
PMID:9228021 PMID:10829036
RGD:631904
NCBI chr 2:226,748,724...226,763,183
Ensembl chr 2:226,741,788...226,763,182
G
Crabp1
cellular retinoic acid binding protein 1
enables
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr 8:55,138,363...55,159,360
Ensembl chr 8:55,151,285...55,159,360
G
Crabp2
cellular retinoic acid binding protein 2
enables
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr 2:173,417,004...173,421,352
Ensembl chr 2:173,416,857...173,421,379
G
Lrat
lecithin retinol acyltransferase
IDA
RGD
PMID:8460936 PMID:2253789 PMID:9244401
RGD:1599831 , RGD:1599829 , RGD:1599832
NCBI chr 2:168,264,093...168,273,155
Ensembl chr 2:168,266,877...168,273,619
G
Rbp1
retinol binding protein 1
IDA
RGD
PMID:19965581 PMID:12850148 PMID:16755609
RGD:6484697 , RGD:6893656 , RGD:6484735
NCBI chr 8:99,025,218...99,046,740
Ensembl chr 8:99,025,206...99,046,743
G
Rbp2
retinol binding protein 2
TAS IDA
RGD
PMID:3029082 PMID:12850148 PMID:19965581
RGD:729693 , RGD:6893656 , RGD:6484697
NCBI chr 8:99,079,293...99,104,489
Ensembl chr 8:99,079,104...99,104,473
G
Rbp3
retinol binding protein 3
enables
IDA IBA
GO_REF:0000033
GO_Central RGD
PMID:8282025
GO_REF:0000033, RGD:6893658
NCBI chr16:9,267,538...9,276,006
Ensembl chr16:9,267,538...9,276,006
G
Rbp4
retinol binding protein 4
enables
IDA ISO IBA IEA
(PMID:12484775) GO_REF:0000033 GO_REF:0000107 PMID:4708098 (PMID:9757135) (PMID:571335)
RGD GO_Central Ensembl
PMID:571335 PMID:9757135 PMID:12484775 PMID:9260907 PMID:4708098
GO_REF:0000033 GO_REF:0000107, RGD:6484695 , RGD:11567252
NCBI chr 1:235,893,917...235,901,315
Ensembl chr 1:235,893,917...235,901,399
G
Stra6
signaling receptor and transporter of retinol STRA6
enables
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr 8:58,548,899...58,568,861
Ensembl chr 8:58,549,736...58,568,860
G
Tpk1
thiamin pyrophosphokinase 1
enables
IEA
GO_REF:0000104 GO_REF:0000002
UniProt InterPro
GO_REF:0000002 GO_REF:0000104
NCBI chr 4:72,170,134...72,557,707
Ensembl chr 4:72,170,134...72,557,694
G
Dhtkd1
dehydrogenase E1 and transketolase domain containing 1
enables
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr17:72,355,201...72,406,725
Ensembl chr17:72,355,201...72,406,723
G
Hacl1
2-hydroxyacyl-CoA lyase 1
enables
IDA IBA IEA ISO
PMID:10468558 GO_REF:0000033 GO_REF:0000107 GO_REF:0000002 (PMID:10468558), (PMID:21708296)
GO_Central Ensembl InterPro RGD
PMID:10468558 PMID:21708296 PMID:10468558
GO_REF:0000002 GO_REF:0000033 GO_REF:0000107, RGD:708588
NCBI chr16:6,826,881...6,863,027
Ensembl chr16:6,824,906...6,863,027
G
Ilvbl
ilvB acetolactate synthase like
enables
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 7:11,039,870...11,049,924
Ensembl chr 7:11,039,871...11,049,924
G
Ogdh
oxoglutarate dehydrogenase
enables
ISO IEA ISS
(PMID:24495017) GO_REF:0000107 GO_REF:0000002 GO_REF:0000024
RGD Ensembl InterPro UniProt
PMID:24495017
GO_REF:0000002 GO_REF:0000024 GO_REF:0000107
NCBI chr14:81,150,021...81,217,479
Ensembl chr14:81,150,091...81,217,479
G
Ogdhl
oxoglutarate dehydrogenase L
enables
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr16:7,578,343...7,604,385
Ensembl chr16:7,578,367...7,604,386
G
Tkt
transketolase
enables
IDA IBA
GO_REF:0000033
GO_Central RGD
PMID:16116031
GO_REF:0000033, RGD:1580394
NCBI chr16:5,723,764...5,748,702
Ensembl chr16:5,723,762...5,748,698
G
Tktl1
transketolase-like 1
enables
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr X:151,954,261...151,987,208
Ensembl chr X:151,954,175...151,987,208
G
Tktl2
transketolase-like 2
enables
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr16:23,202,460...23,209,741
Ensembl chr16:23,202,453...23,209,742
G
Scly
selenocysteine lyase
enables
IDA
PMID:20164179
CAFA
PMID:20164179
RGD:12793035
NCBI chr 9:91,890,269...91,910,947
Ensembl chr 9:91,890,306...91,910,941
G
Calb1
calbindin 1
enables
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr 5:29,375,624...29,402,532
Ensembl chr 5:29,375,642...29,402,431
G
Comp
cartilage oligomeric matrix protein
IMP
RGD
PMID:12426368
RGD:1298777
NCBI chr16:19,047,206...19,055,584
Ensembl chr16:19,047,207...19,055,845
G
Gc
GC, vitamin D binding protein
enables
TAS IBA IEA IDA
GO_REF:0000033 GO_REF:0000043
GO_Central UniProt RGD
PMID:9774468 PMID:49052
GO_REF:0000033 GO_REF:0000043, RGD:731145 , RGD:2315532
NCBI chr14:18,632,146...18,667,563
Ensembl chr14:18,632,135...18,667,567
G
S100g
S100 calcium binding protein G
enables
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr X:31,705,853...31,708,422
Ensembl chr X:31,705,866...31,708,433
G
Vdr
vitamin D receptor
IMP IDA
RGD
PMID:2829212 PMID:2829212
RGD:729973 , RGD:729973
NCBI chr 7:128,987,981...129,037,677
Ensembl chr 7:128,987,981...129,037,677
G
Afm
afamin
enables
ISS IBA ISO IEA
GO_REF:0000024 GO_REF:0000033 CHEBI:18145|CHEBI:18185 (PMID:12463752), (PMID:15952736) GO_REF:0000107
UniProt GO_Central RGD Ensembl
PMID:12463752 PMID:15952736
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107
NCBI chr14:17,531,022...17,563,868
Ensembl chr14:17,531,024...17,563,870
G
Npc1l1
NPC1 like intracellular cholesterol transporter 1
enables
ISO
(PMID:28315682)
RGD
PMID:28315682
NCBI chr14:81,071,448...81,091,113
Ensembl chr14:81,071,451...81,091,113
G
Ttpa
alpha tocopherol transfer protein
enables
IDA ISO IBA IEA
(PMID:23599266) GO_REF:0000033 GO_REF:0000107
RGD GO_Central Ensembl
PMID:23599266 PMID:1569384
GO_REF:0000033 GO_REF:0000107, RGD:1600437
NCBI chr 5:33,497,537...33,518,936
Ensembl chr 5:33,497,137...33,518,073
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