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ONTOLOGY REPORT - ANNOTATIONS

Term:virion assembly
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Accession:GO:0019068 term browser browse the term
Definition:A late phase of the viral life cycle during which all the components necessary for the formation of a mature virion collect at a particular site in the cell and the basic structure of the virus particle is formed.
Synonyms:exact_synonym: viral assembly;   viral particle assembly;   virion assembly and maintenance;   virion organization;   virus assembly;   virus particle assembly
 narrow_synonym: bacteriophage assembly;   phage assembly
 alt_id: GO:0042963
 xref: Reactome:R-HSA-168302 "Budding";   Reactome:R-HSA-168316 "Assembly of Viral Components at the Budding Site";   Reactome:R-HSA-175474 "Assembly Of The HIV Virion"


show annotations for term's descendants           Sort by:
virion assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E involved_in ISO
IEA		 (PMID:25122793)
GO_REF:0000107		 RGD
Ensembl		 PMID:25122793 GO_REF:0000107 NCBI chr 1:88,481,889...88,485,816
Ensembl chr 1:79,353,916...79,357,932 		JBrowse link
G ENSRNOG00000063848 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 9:74,231,751...74,237,923 JBrowse link
G ENSRNOG00000064469 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr16:44,597,493...44,599,395 JBrowse link
G ENSRNOG00000068182 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr14:74,037,179...74,039,851 JBrowse link
G ENSRNOG00000068626 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 7:65,366,642...65,382,934 JBrowse link
G Foxo1l forkhead box O1 like involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:36,636,617...36,646,847
Ensembl chr 9:36,640,751...36,646,855 		JBrowse link
G LOC134485139 uncharacterized LOC134485139 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 1:129,637,115...129,655,358 JBrowse link
G Rab43 RAB43, member RAS oncogene family involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 4:121,806,992...121,826,694
Ensembl chr 4:120,249,879...120,269,174 		JBrowse link
G Spcs1 signal peptidase complex subunit 1 involved_in ISO (PMID:24009510), (PMID:29593046) RGD PMID:24009510 PMID:29593046 NCBI chr16:6,196,653...6,198,221
Ensembl chr16:6,190,262...6,192,000 		JBrowse link
G Tbc1d20 TBC1 domain family, member 20 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 3:140,768,537...140,787,010
Ensembl chr 3:140,768,537...140,785,121 		JBrowse link
G Usp6nl USP6 N-terminal like involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr17:71,828,433...71,956,878
Ensembl chr17:71,830,469...71,956,027 		JBrowse link
positive regulation of viral budding via host ESCRT complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tsg101 tumor susceptibility 101 involved_in ISO
IEA		 (PMID:11595185)
GO_REF:0000107		 RGD
Ensembl		 PMID:11595185 GO_REF:0000107 NCBI chr 1:106,549,035...106,578,859
Ensembl chr 1:97,410,848...97,442,554 		JBrowse link
G Vps37b VPS37B subunit of ESCRT-I involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr12:32,560,047...32,589,015
Ensembl chr12:32,560,047...32,589,014 		JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A involved_in ISO
IEA		 (PMID:24878737)
GO_REF:0000107		 RGD
Ensembl		 PMID:24878737 GO_REF:0000107 NCBI chr19:34,934,999...34,948,888
Ensembl chr19:34,934,961...34,948,887 		JBrowse link
viral budding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrsam1 leucine rich repeat and sterile alpha motif containing 1 involved_in ISO (PMID:15256501) RGD PMID:15256501 NCBI chr 3:36,621,042...36,661,932
Ensembl chr 3:16,223,367...16,264,154 		JBrowse link
G Mvb12a multivesicular body subunit 12A involved_in IEA
IBA		 GO_REF:0000107
GO_REF:0000033		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr16:18,252,227...18,257,111
Ensembl chr16:18,252,222...18,257,539 		JBrowse link
G Mvb12b multivesicular body subunit 12B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:17,034,002...17,192,658
Ensembl chr 3:17,034,003...17,193,202 		JBrowse link
G Nedd4 NEDD4 E3 ubiquitin protein ligase involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 8:73,384,095...73,468,951
Ensembl chr 8:73,383,695...73,468,951 		JBrowse link
G Pdcd6ip programmed cell death 6 interacting protein involved_in ISO (PMID:18641129) RGD PMID:18641129 NCBI chr 8:122,469,223...122,524,993
Ensembl chr 8:113,590,998...113,646,773 		JBrowse link
G Tsg101 tumor susceptibility 101 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:15256501)
GO_REF:0000107
(PMID:15126635)		 UniProt
RGD
Ensembl		 PMID:15126635 PMID:15256501 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:106,549,035...106,578,859
Ensembl chr 1:97,410,848...97,442,554 		JBrowse link
viral budding from plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chmp1a charged multivesicular body protein 1A involved_in ISO (PMID:24878737) RGD PMID:24878737 NCBI chr19:68,146,672...68,154,952
Ensembl chr19:51,238,160...51,246,436 		JBrowse link
G Chmp1b charged multivesicular body protein 1B involved_in ISO (PMID:24878737) RGD PMID:24878737 NCBI chr18:63,010,270...63,012,800 JBrowse link
G Chmp2a charged multivesicular body protein 2A involved_in ISO (PMID:24878737) RGD PMID:24878737 NCBI chr 1:82,731,212...82,735,088
Ensembl chr 1:73,660,046...73,662,452 		JBrowse link
G Chmp2b charged multivesicular body protein 2B involved_in ISO (PMID:24878737) RGD PMID:24878737 NCBI chr11:16,783,971...16,810,500
Ensembl chr11:3,337,494...3,385,181 		JBrowse link
G Chmp3 charged multivesicular body protein 3 involved_in ISO (PMID:24878737) RGD PMID:24878737 NCBI chr 4:105,134,860...105,180,862
Ensembl chr 4:103,576,515...103,623,959 		JBrowse link
G Chmp4b charged multivesicular body protein 4B involved_in ISO (PMID:24878737) RGD PMID:24878737 NCBI chr 3:163,631,054...163,671,569
Ensembl chr 3:143,170,902...143,210,844 		JBrowse link
G Chmp4c charged multivesicular body protein 4C involved_in IEA
ISO		 GO_REF:0000107
(PMID:24878737)		 Ensembl
RGD		 PMID:24878737 GO_REF:0000107 NCBI chr 2:93,299,152...93,336,075
Ensembl chr 2:91,388,530...91,428,668 		JBrowse link
G Chmp5 charged multivesicular body protein 5 involved_in ISO (PMID:24878737) RGD PMID:24878737 NCBI chr 5:60,877,369...60,894,512
Ensembl chr 5:56,081,343...56,098,529 		JBrowse link
G Chmp6 charged multivesicular body protein 6 involved_in ISO (PMID:24878737) RGD PMID:24878737 NCBI chr10:105,690,400...105,696,070
Ensembl chr10:105,191,950...105,197,640 		JBrowse link
G Chmp7 charged multivesicular body protein 7 involved_in ISO (PMID:24878737) RGD PMID:24878737 NCBI chr15:51,200,759...51,215,992
Ensembl chr15:44,790,996...44,806,216 		JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A involved_in IEA
ISO		 GO_REF:0000107
(PMID:17940959)
(PMID:16193069)		 Ensembl
RGD		 PMID:16193069 PMID:17940959 GO_REF:0000107 NCBI chr19:34,934,999...34,948,888
Ensembl chr19:34,934,961...34,948,887 		JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B involved_in ISO (PMID:16193069)
(PMID:17940959)		 RGD PMID:16193069 PMID:17940959 NCBI chr13:22,907,105...22,932,200
Ensembl chr13:22,907,109...22,932,229 		JBrowse link
viral budding via host ESCRT complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chmp1a charged multivesicular body protein 1A involved_in ISO (PMID:24878737) RGD PMID:24878737 NCBI chr19:68,146,672...68,154,952
Ensembl chr19:51,238,160...51,246,436 		JBrowse link
G Chmp1b charged multivesicular body protein 1B involved_in ISO (PMID:24878737) RGD PMID:24878737 NCBI chr18:63,010,270...63,012,800 JBrowse link
G Chmp2a charged multivesicular body protein 2A involved_in ISO UniProtKB:Q9UQN3 (PMID:24107264), (PMID:24878737) RGD PMID:24107264 PMID:24878737 NCBI chr 1:82,731,212...82,735,088
Ensembl chr 1:73,660,046...73,662,452 		JBrowse link
G Chmp2b charged multivesicular body protein 2B involved_in ISO UniProtKB:O43633 (PMID:24107264), (PMID:24878737) RGD PMID:24107264 PMID:24878737 NCBI chr11:16,783,971...16,810,500
Ensembl chr11:3,337,494...3,385,181 		JBrowse link
G Chmp3 charged multivesicular body protein 3 involved_in ISO (PMID:24878737) RGD PMID:24878737 NCBI chr 4:105,134,860...105,180,862
Ensembl chr 4:103,576,515...103,623,959 		JBrowse link
G Chmp4b charged multivesicular body protein 4B involved_in ISO UniProtKB:Q8WUM4|UniProtKB:Q9BY43 (PMID:24107264), (PMID:24878737) RGD PMID:24107264 PMID:24878737 NCBI chr 3:163,631,054...163,671,569
Ensembl chr 3:143,170,902...143,210,844 		JBrowse link
G Chmp4c charged multivesicular body protein 4C involved_in ISO
IEA		 (PMID:24878737)
GO_REF:0000107		 RGD
Ensembl		 PMID:24878737 GO_REF:0000107 NCBI chr 2:93,299,152...93,336,075
Ensembl chr 2:91,388,530...91,428,668 		JBrowse link
G Chmp5 charged multivesicular body protein 5 involved_in ISO (PMID:24878737) RGD PMID:24878737 NCBI chr 5:60,877,369...60,894,512
Ensembl chr 5:56,081,343...56,098,529 		JBrowse link
G Chmp6 charged multivesicular body protein 6 involved_in ISO (PMID:24878737) RGD PMID:24878737 NCBI chr10:105,690,400...105,696,070
Ensembl chr10:105,191,950...105,197,640 		JBrowse link
G Chmp7 charged multivesicular body protein 7 involved_in ISO (PMID:24878737) RGD PMID:24878737 NCBI chr15:51,200,759...51,215,992
Ensembl chr15:44,790,996...44,806,216 		JBrowse link
G Mitd1 microtubule interacting and trafficking domain containing 1 NOT|involved_in ISO (PMID:23045692) RGD PMID:23045692 NCBI chr 9:40,113,943...40,125,280
Ensembl chr 9:40,113,946...40,125,289 		JBrowse link
G Pdcd6ip programmed cell death 6 interacting protein involved_in ISO UniProtKB:Q9H444 (PMID:24107264) RGD PMID:24107264 NCBI chr 8:122,469,223...122,524,993
Ensembl chr 8:113,590,998...113,646,773 		JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A involved_in ISO
IEA		 UniProtKB:O75351 (PMID:24107264)
GO_REF:0000107		 RGD
Ensembl		 PMID:24107264 GO_REF:0000107 NCBI chr19:34,934,999...34,948,888
Ensembl chr19:34,934,961...34,948,887 		JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B involved_in ISO UniProtKB:Q9UN37 (PMID:24107264) RGD PMID:24107264 NCBI chr13:22,907,105...22,932,200
Ensembl chr13:22,907,109...22,932,229 		JBrowse link
viral RNA genome packaging term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx6 DEAD-box helicase 6 involved_in ISO (PMID:22022269) RGD PMID:22022269 NCBI chr 8:53,827,661...53,864,538
Ensembl chr 8:44,931,974...44,964,405
Ensembl chr 8:44,931,974...44,964,405 		JBrowse link
G Pc pyruvate carboxylase involved_in ISO
IEA		 (PMID:23861867)
GO_REF:0000107		 RGD
Ensembl		 PMID:23861867 GO_REF:0000107 NCBI chr 1:211,228,708...211,327,792
Ensembl chr 1:201,804,267...201,898,380 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20546
    viral process 323
      virion assembly 33
        viral budding + 20
        viral capsid assembly + 0
        viral genome maturation 0
        viral genome packaging + 2
        viral head-tail joining 0
        viral tail assembly + 0
Path 2
Term Annotations click to browse term
  biological_process 20546
    viral process 323
      viral life cycle 245
        virion assembly 33
          viral budding + 20
          viral capsid assembly + 0
          viral genome maturation 0
          viral genome packaging + 2
          viral head-tail joining 0
          viral tail assembly + 0
paths to the root