Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:vacuolar proton-transporting V-type ATPase complex
go back to main search page
Accession:GO:0016471 term browser browse the term
Definition:A proton-transporting two-sector ATPase complex found in the vacuolar membrane, where it acts as a proton pump to mediate acidification of the vacuolar lumen.
Comment:See also the cellular component terms 'vacuolar proton-transporting V-type ATPase, V1 domain ; GO:0000221' and 'vacuolar proton-transporting V-type ATPase, V0 domain ; GO:0000220' and the molecular function term 'hydrogen ion transporting ATPase activity, rotational mechanism ; GO:0046961'.
Synonyms:exact_synonym: vacuolar hydrogen-translocating V-type ATPase complex


show annotations for term's descendants           Sort by:
vacuolar proton-transporting V-type ATPase complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP6AP2 ATPase H+ transporting accessory protein 2 part_of IEA Ensembl GO_REF:0000107 NCBI chr  X:35,050,588...35,073,633
Ensembl chr  X:35,050,606...35,073,067 		JBrowse link
G ATP6V0A1 ATPase H+ transporting V0 subunit a1 part_of IBA GO_Central GO_REF:0000033 NCBI chr 9:20,422,144...20,486,459
Ensembl chr 9:20,423,373...20,484,328 		JBrowse link
G ATP6V0A2 ATPase H+ transporting V0 subunit a2 part_of IBA GO_Central GO_REF:0000033 NCBI chr26:5,911,319...5,952,773
Ensembl chr26:5,912,887...5,952,306 		JBrowse link
G ATP6V0A4 ATPase H+ transporting V0 subunit a4 part_of IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr16:9,864,938...9,949,740
Ensembl chr16:9,885,149...9,949,708 		JBrowse link
G ATP6V0D1 ATPase H+ transporting V0 subunit d1 part_of IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:81,926,589...81,965,959
Ensembl chr 5:81,926,612...81,965,526 		JBrowse link
G ATP6V0D2 ATPase H+ transporting V0 subunit d2 part_of IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr29:32,336,304...32,378,818
Ensembl chr29:32,336,467...32,378,527 		JBrowse link
G ATP6V1B1 ATPase H+ transporting V1 subunit B1 part_of IEA Ensembl GO_REF:0000107 NCBI chr10:69,261,311...69,287,540
Ensembl chr10:69,252,926...69,287,542 		JBrowse link
G ATP6V1F ATPase H+ transporting V1 subunit F part_of IEA Ensembl GO_REF:0000107 NCBI chr14:7,786,841...7,789,584
Ensembl chr14:7,786,844...7,789,548 		JBrowse link
G ATP6V1G1 ATPase H+ transporting V1 subunit G1 part_of IEA InterPro GO_REF:0000002 NCBI chr11:68,755,586...68,760,863 JBrowse link
G ATP6V1G2 ATPase H+ transporting V1 subunit G2 part_of IEA InterPro GO_REF:0000002 NCBI chr12:1,046,109...1,049,839
Ensembl chr12:1,046,732...1,050,103 		JBrowse link
G ATP6V1G3 ATPase H+ transporting V1 subunit G3 part_of IEA InterPro GO_REF:0000002 NCBI chr 7:4,368,476...4,388,544
Ensembl chr 7:4,368,418...4,388,539 		JBrowse link
G CCDC115 coiled-coil domain containing 115 part_of ISO (PMID:28296633) UniProt PMID:28296633 NCBI chr25:19,027,014...19,031,467
Ensembl chr25:19,027,342...19,030,887 		JBrowse link
G LOC111090910 V-type proton ATPase subunit G 1-like part_of IEA InterPro GO_REF:0000002 NCBI chr18:17,137,094...17,139,037 JBrowse link
G TCIRG1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 part_of IBA GO_Central GO_REF:0000033 NCBI chr18:49,784,480...49,794,361
Ensembl chr18:49,784,490...49,794,317 		JBrowse link
G TMEM199 transmembrane protein 199 part_of IEA Ensembl GO_REF:0000107 NCBI chr 9:42,607,688...42,614,776
Ensembl chr 9:42,607,733...42,611,445 		JBrowse link
lysosomal proton-transporting V-type ATPase complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SPAAR small regulatory polypeptide of amino acid response located_in ISO (PMID:28024296) UniProt PMID:28024296 NCBI chr11:52,424,607...52,427,288
Ensembl chr11:52,426,076...52,426,303 		JBrowse link
vacuolar proton-transporting V-type ATPase, V0 domain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP6V0A1 ATPase H+ transporting V0 subunit a1 part_of IEA InterPro GO_REF:0000002 NCBI chr 9:20,422,144...20,486,459
Ensembl chr 9:20,423,373...20,484,328 		JBrowse link
G ATP6V0A2 ATPase H+ transporting V0 subunit a2 part_of IEA InterPro GO_REF:0000002 NCBI chr26:5,911,319...5,952,773
Ensembl chr26:5,912,887...5,952,306 		JBrowse link
G ATP6V0A4 ATPase H+ transporting V0 subunit a4 part_of IEA InterPro GO_REF:0000002 NCBI chr16:9,864,938...9,949,740
Ensembl chr16:9,885,149...9,949,708 		JBrowse link
G TCIRG1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 part_of IEA InterPro GO_REF:0000002 NCBI chr18:49,784,480...49,794,361
Ensembl chr18:49,784,490...49,794,317 		JBrowse link
vacuolar proton-transporting V-type ATPase, V1 domain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP6V1A ATPase H+ transporting V1 subunit A part_of IEA Ensembl GO_REF:0000107 NCBI chr33:18,038,143...18,103,649
Ensembl chr33:18,038,801...18,101,435 		JBrowse link
G ATP6V1B1 ATPase H+ transporting V1 subunit B1 part_of IEA Ensembl GO_REF:0000107 NCBI chr10:69,261,311...69,287,540
Ensembl chr10:69,252,926...69,287,542 		JBrowse link
G ATP6V1B2 ATPase H+ transporting V1 subunit B2 part_of IEA Ensembl GO_REF:0000107 NCBI chr25:36,833,246...36,858,846
Ensembl chr25:36,834,196...36,858,819 		JBrowse link
G ATP6V1C1 ATPase H+ transporting V1 subunit C1 part_of IBA GO_Central GO_REF:0000033 NCBI chr13:4,509,699...4,569,500
Ensembl chr13:4,510,003...4,579,846 		JBrowse link
G ATP6V1C2 ATPase H+ transporting V1 subunit C2 part_of IBA GO_Central GO_REF:0000033 NCBI chr17:7,602,348...7,653,402
Ensembl chr17:7,599,535...7,653,402 		JBrowse link
G ATP6V1E1 ATPase H+ transporting V1 subunit E1 part_of ISO (PMID:33065002)
PMID:32165585		 UniProt PMID:32165585 PMID:33065002 RGD:39458019 NCBI chr27:45,222,647...45,249,317 JBrowse link
G ATP6V1G1 ATPase H+ transporting V1 subunit G1 part_of IBA GO_Central GO_REF:0000033 NCBI chr11:68,755,586...68,760,863 JBrowse link
G ATP6V1G2 ATPase H+ transporting V1 subunit G2 part_of ISS
IBA		 UniProt
GO_Central		 GO_REF:0000024 GO_REF:0000033 NCBI chr12:1,046,109...1,049,839
Ensembl chr12:1,046,732...1,050,103 		JBrowse link
G ATP6V1G3 ATPase H+ transporting V1 subunit G3 part_of IBA GO_Central GO_REF:0000033 NCBI chr 7:4,368,476...4,388,544
Ensembl chr 7:4,368,418...4,388,539 		JBrowse link
G ATP6V1H ATPase H+ transporting V1 subunit H part_of IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chr29:5,381,693...5,544,062
Ensembl chr29:5,260,175...5,508,960 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 23089
    protein-containing complex 9451
      membrane protein complex 1333
        proton-transporting two-sector ATPase complex 80
          proton-transporting V-type ATPase complex 31
            vacuolar proton-transporting V-type ATPase complex 22
              lysosomal proton-transporting V-type ATPase complex + 1
              vacuolar proton-transporting V-type ATPase, V0 domain + 4
              vacuolar proton-transporting V-type ATPase, V1 domain + 10
Path 2
Term Annotations click to browse term
  cellular_component 23089
    cellular anatomical structure 22799
      membrane 9403
        membrane protein complex 1333
          transmembrane transporter complex 531
            ATPase dependent transmembrane transport complex 49
              cation-transporting ATPase complex 47
                proton-transporting V-type ATPase complex 31
                  vacuolar proton-transporting V-type ATPase complex 22
                    lysosomal proton-transporting V-type ATPase complex + 1
                    vacuolar proton-transporting V-type ATPase, V0 domain + 4
                    vacuolar proton-transporting V-type ATPase, V1 domain + 10
paths to the root