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ONTOLOGY REPORT - ANNOTATIONS


Term:endosomal transport
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Accession:GO:0016197 term browser browse the term
Definition:The directed movement of substances mediated by an endosome, a membrane-bounded organelle that carries materials enclosed in the lumen or located in the endosomal membrane.
Synonyms:exact_synonym: endosome localisation
 related_synonym: endosome localization;   endosome transport
 alt_id: GO:0032439
 xref: Reactome:R-HSA-917729 "Endosomal Sorting Complex Required For Transport (ESCRT)"



show annotations for term's descendants           Sort by:
endosomal transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 involved_in ISO (PMID:14747463) RGD PMID:14747463 NCBI chr 5:72,473,676...72,596,563
Ensembl chr 5:67,681,297...67,801,170
JBrowse link
G Agap2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 acts_upstream_of_or_within ISO (PMID:12388557) RGD PMID:12388557 NCBI chr 7:64,782,618...64,799,624
Ensembl chr 7:62,897,282...62,914,295
JBrowse link
G Alms1 ALMS1, centrosome and basal body associated protein acts_upstream_of_or_within ISO (PMID:22693585) RGD PMID:22693585 NCBI chr 4:119,683,085...119,783,471
Ensembl chr 4:118,125,607...118,226,005
JBrowse link
G Als2 alsin Rho guanine nucleotide exchange factor ALS2 involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
GO_REF:0000107
GO_REF:0000033
MGI:3612978|MGI:3653518 (PMID:16321985), (PMID:16769894)
Ensembl
GO_Central
RGD
PMID:16321985 PMID:16769894 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:68,107,310...68,180,192
Ensembl chr 9:60,613,167...60,670,737
JBrowse link
G Als2cl ALS2 C-terminal like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:110,863,753...110,884,434
Ensembl chr 8:110,864,975...110,884,419
JBrowse link
G Ankfy1 ankyrin repeat and FYVE domain containing 1 involved_in ISO (PMID:24102721) RGD PMID:24102721 NCBI chr10:57,312,246...57,383,964
Ensembl chr10:57,312,246...57,383,964
JBrowse link
G Anxa8 annexin A8 involved_in ISO
IBA
(PMID:18923148)
GO_REF:0000033
RGD
GO_Central
PMID:18923148 GO_REF:0000033 NCBI chr16:9,403,267...9,418,317
Ensembl chr16:9,397,113...9,412,043
JBrowse link
G Ap5b1 adaptor related protein complex 5 subunit beta 1 involved_in ISO
IBA
IEA
ISS
(PMID:22022230)
GO_REF:0000033
GO_REF:0000002
GO_REF:0000024
RGD
GO_Central
InterPro
UniProt
PMID:22022230 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 NCBI chr 1:212,305,612...212,309,643
Ensembl chr 1:202,876,272...202,880,289
JBrowse link
G Ap5m1 adaptor related protein complex 5 subunit mu 1 involved_in ISO
IBA
ISS
(PMID:22022230)
GO_REF:0000033
GO_REF:0000024
RGD
GO_Central
UniProt
PMID:22022230 GO_REF:0000024 GO_REF:0000033 NCBI chr15:24,835,122...24,864,854
Ensembl chr15:22,355,500...22,377,750
JBrowse link
G Ap5s1 adaptor related protein complex 5 subunit sigma 1 involved_in ISO
IBA
(PMID:22022230)
GO_REF:0000033
RGD
GO_Central
PMID:22022230 GO_REF:0000033 NCBI chr 3:118,429,618...118,432,929
Ensembl chr 3:118,429,637...118,432,926
JBrowse link
G Ap5z1 adaptor related protein complex 5 subunit zeta 1 involved_in ISO (PMID:22022230) RGD PMID:22022230 NCBI chr12:12,093,834...12,109,043
Ensembl chr12:12,093,834...12,108,511
JBrowse link
G Arhgap1 Rho GTPase activating protein 1 involved_in ISO (PMID:16380373) RGD PMID:16380373 NCBI chr 3:98,077,064...98,099,163
Ensembl chr 3:77,620,655...77,643,396
JBrowse link
G Arl8b ARF like GTPase 8B acts_upstream_of_or_within ISO (PMID:24841562) RGD PMID:24841562 NCBI chr 4:143,304,597...143,348,580
Ensembl chr 4:141,748,587...141,792,596
JBrowse link
G Bloc1s1 biogenesis of lysosomal organelles complex-1, subunit 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:1,347,495...1,351,103
Ensembl chr 7:1,340,934...1,351,558
JBrowse link
G Bloc1s2 biogenesis of lysosomal organelles complex-1, subunit 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:252,973,818...252,980,873
Ensembl chr 1:243,024,614...243,031,653
JBrowse link
G Bltp1 bridge-like lipid transfer protein family member 1 involved_in ISO (PMID:30906834) RGD PMID:30906834 NCBI chr 2:119,708,114...119,924,697
Ensembl chr 2:119,708,209...119,924,695
JBrowse link
G Caly calcyon neuron-specific vesicular protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:194,862,671...194,873,861
Ensembl chr 1:194,862,672...194,873,551
JBrowse link
G Clec16a C-type lectin domain containing 16A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:5,434,725...5,631,246
Ensembl chr10:4,928,030...5,123,578
JBrowse link
G Coro1c coronin 1C involved_in ISO (PMID:30220460) RGD PMID:30220460 NCBI chr12:48,373,573...48,445,718
Ensembl chr12:42,712,991...42,785,179
JBrowse link
G Cracr2a calcium release activated channel regulator 2A involved_in ISO (PMID:30814157) RGD PMID:30814157 NCBI chr 4:162,094,247...162,207,926
Ensembl chr 4:160,408,077...160,518,107
JBrowse link
G Diaph3 diaphanous-related formin 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:33036023)
Ensembl
RGD
PMID:33036023 GO_REF:0000107 NCBI chr15:68,951,992...69,421,623
Ensembl chr15:62,543,375...63,012,975
JBrowse link
G Dpy30 dpy-30 histone methyltransferase complex regulatory subunit involved_in ISS
ISO
GO_REF:0000024
(PMID:19651892)
UniProt
RGD
PMID:19651892 GO_REF:0000024 NCBI chr 6:21,120,947...21,141,720
Ensembl chr 6:21,120,947...21,141,432
JBrowse link
G Ehd1 EH-domain containing 1 acts_upstream_of_or_within ISO (PMID:11389441) RGD PMID:11389441 NCBI chr 1:203,579,850...203,602,226
Ensembl chr 1:203,579,869...203,602,212
JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:129,274,487...129,374,856
Ensembl chr 5:124,045,926...124,146,221
JBrowse link
G Eps15l1 epidermal growth factor receptor pathway substrate 15-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:17,460,330...17,573,824
Ensembl chr16:17,426,421...17,501,677
JBrowse link
G Htt huntingtin acts_upstream_of_or_within ISO MGI:1857180 (PMID:11092755) RGD PMID:11092755 NCBI chr14:80,070,456...80,219,668
Ensembl chr14:75,845,836...75,995,070
JBrowse link
G Itsn1 intersectin 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:44,464,515...44,646,598
Ensembl chr11:30,978,590...31,160,645
JBrowse link
G Itsn2 intersectin 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:33,336,086...33,446,818
Ensembl chr 6:27,600,406...27,727,124
JBrowse link
G Lamtor1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:19177150)
GO_REF:0000002
UniProt
RGD
InterPro
PMID:19177150 GO_REF:0000002 GO_REF:0000024 NCBI chr 1:165,684,001...165,689,698
Ensembl chr 1:156,272,064...156,291,179
JBrowse link
G Lamtor1l1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 like 1 involved_in ISS
IEA
GO_REF:0000024
GO_REF:0000002
UniProt
InterPro
GO_REF:0000002 GO_REF:0000024 NCBI chr  X:38,446,140...38,447,189
Ensembl chr  X:34,637,459...34,638,516
JBrowse link
G Lrp2 LDL receptor related protein 2 IMP RGD PMID:9039057 RGD:1641882 NCBI chr 3:74,597,148...74,754,535
Ensembl chr 3:54,189,308...54,346,708
JBrowse link
G Mx2 MX dynamin like GTPase 2 involved_in ISO (PMID:20167191) RGD PMID:20167191 NCBI chr11:50,375,101...50,399,373
Ensembl chr11:36,906,111...36,930,342
JBrowse link
G Myo5b myosin Vb involved_in ISO
IEA
ISS
(PMID:21206382)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:21206382 GO_REF:0000024 GO_REF:0000107 NCBI chr18:68,038,759...68,341,568
Ensembl chr18:68,038,759...68,338,745
JBrowse link
G Nsg1 neuronal vesicle trafficking associated 1 involved_in IMP
IBA
GO_REF:0000033 GO_Central
RGD
PMID:18299352 GO_REF:0000033, RGD:9850091 NCBI chr14:72,648,771...72,670,521
Ensembl chr14:72,648,741...72,670,514
JBrowse link
G Nsg2 neuronal vesicle trafficking associated 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:15,601,594...15,661,441
Ensembl chr10:15,601,596...15,661,441
JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein involved_in IEA
ISO
GO_REF:0000107
(PMID:16262731)
Ensembl
RGD
PMID:16262731 GO_REF:0000107 NCBI chr 1:144,056,415...144,138,045
Ensembl chr 1:144,056,721...144,137,557
JBrowse link
G Rab10 RAB10, member RAS oncogene family involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:16641372)
Ensembl
UniProt
RGD
PMID:16641372 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:31,974,858...32,039,554
Ensembl chr 6:26,266,859...26,320,193
JBrowse link
G Rab13 RAB13, member RAS oncogene family involved_in ISO
ISS
(PMID:18779367)
GO_REF:0000024
RGD
UniProt
PMID:18779367 GO_REF:0000024 NCBI chr 2:177,972,535...177,977,679
Ensembl chr 2:175,675,005...175,680,036
JBrowse link
G Rab35 RAB35, member RAS oncogene family involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:16950109), (PMID:21951725)
UniProt
Ensembl
RGD
PMID:16950109 PMID:21951725 GO_REF:0000024 GO_REF:0000107 NCBI chr12:46,627,302...46,642,815
Ensembl chr12:40,967,103...40,991,195
JBrowse link
G Rassf9 Ras association domain family member 9 involved_in NAS PMID:9837933 UniProt PMID:9837933 RGD:633607 NCBI chr 7:37,599,720...37,631,553
Ensembl chr 7:37,599,720...37,635,245
JBrowse link
G Reps1 RALBP1 associated Eps domain containing 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:14,517,589...14,595,404
Ensembl chr 1:12,697,747...12,775,561
JBrowse link
G Reps2 RALBP1 associated Eps domain containing 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:35,681,260...35,954,103
Ensembl chr  X:32,049,399...32,317,414
JBrowse link
G Snap25 synaptosome associated protein 25 IDA RGD PMID:16481393 RGD:1581071 NCBI chr 3:144,494,579...144,576,449
Ensembl chr 3:124,041,898...124,123,760
JBrowse link
G Snx1 sorting nexin 1 IEP RGD PMID:11110793 RGD:68866 NCBI chr 8:75,515,780...75,565,487
Ensembl chr 8:66,630,086...66,670,360
JBrowse link
G Snx18 sorting nexin 18 involved_in ISO
IBA
(PMID:22718350)
GO_REF:0000033
RGD
GO_Central
PMID:22718350 GO_REF:0000033 NCBI chr 2:45,232,325...45,258,345
Ensembl chr 2:45,232,325...45,258,345
JBrowse link
G Snx27 sorting nexin 27 involved_in
acts_upstream_of_or_within
IMP
ISO
PMID:17828261
MGI:4949192 (PMID:21300787)
RGD PMID:21300787 PMID:17828261 RGD:8554502 NCBI chr 2:184,824,930...184,907,931
Ensembl chr 2:182,135,905...182,218,906
JBrowse link
G Snx33 sorting nexin 33 involved_in ISO
IBA
(PMID:22718350)
GO_REF:0000033
RGD
GO_Central
PMID:22718350 GO_REF:0000033 NCBI chr 8:66,213,133...66,224,926
Ensembl chr 8:57,317,161...57,327,538
JBrowse link
G Snx9 sorting nexin 9 involved_in ISO
IBA
(PMID:22718350)
GO_REF:0000033
RGD
GO_Central
PMID:22718350 GO_REF:0000033 NCBI chr 1:46,424,897...46,510,096
Ensembl chr 1:46,423,553...46,509,036
JBrowse link
G Tmcc1 transmembrane and coiled-coil domain family 1 involved_in ISO
IBA
(PMID:30220460)
GO_REF:0000033
RGD
GO_Central
PMID:30220460 GO_REF:0000033 NCBI chr 4:149,069,252...149,239,585
Ensembl chr 4:149,069,260...149,239,620
JBrowse link
G Tom1 target of myb1 membrane trafficking protein involved_in ISO (PMID:14563850), (PMID:26320582) RGD PMID:14563850 PMID:26320582 NCBI chr19:13,411,227...13,446,129
Ensembl chr19:13,405,501...13,440,384
JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A involved_in IC
IBA
IEA
ISO
GO_REF:0000033
GO_REF:0000107
(PMID:10637304), (PMID:11559748)
GO_Central
Ensembl
RGD
PMID:10637304 PMID:11559748 PMID:11931639 GO_REF:0000033 GO_REF:0000107, RGD:2290289 NCBI chr19:51,838,411...51,858,639
Ensembl chr19:34,934,961...34,948,887
JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B acts_upstream_of_or_within
involved_in
ISO
IBA
(PMID:11563910)
GO_REF:0000033
RGD
GO_Central
PMID:11563910 GO_REF:0000033 NCBI chr13:23,421,758...23,446,848
Ensembl chr13:22,907,109...22,932,229
JBrowse link
G Was WASP actin nucleation promoting factor acts_upstream_of_or_within ISO (PMID:12147689) RGD PMID:12147689 NCBI chr  X:17,077,057...17,085,802
Ensembl chr  X:14,405,124...14,413,849
JBrowse link
G Washc1 WASH complex subunit 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:19922875)
UniProt
RGD
PMID:19922875 GO_REF:0000024 NCBI chr 9:113,169,730...113,179,829
Ensembl chr 9:105,722,899...105,733,009
JBrowse link
G Washc4 WASH complex subunit 4 acts_upstream_of_or_within
involved_in
ISO
IBA
(PMID:20923837)
(PMID:19922875)
GO_REF:0000033
RGD
GO_Central
PMID:19922875 PMID:20923837 GO_REF:0000033 NCBI chr 7:22,075,546...22,127,847
Ensembl chr 7:20,187,922...20,240,226
JBrowse link
G Washc5 WASH complex subunit 5 acts_upstream_of_or_within ISO (PMID:20923837) RGD PMID:20923837 NCBI chr 7:90,884,192...90,936,096
Ensembl chr 7:90,884,197...90,936,103
JBrowse link
G Zfyve16 zinc finger FYVE-type containing 16 involved_in ISO
IBA
(PMID:11546807)
GO_REF:0000033
RGD
GO_Central
PMID:11546807 GO_REF:0000033 NCBI chr 2:25,448,264...25,495,180
Ensembl chr 2:23,713,766...23,756,990
JBrowse link
G Zfyve9 zinc finger FYVE-type containing 9 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:128,599,379...128,758,394
Ensembl chr 5:123,370,677...123,529,699
JBrowse link
clathrin-dependent synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Itsn1 intersectin 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:44,464,515...44,646,598
Ensembl chr11:30,978,590...31,160,645
JBrowse link
G Itsn2 intersectin 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:33,336,086...33,446,818
Ensembl chr 6:27,600,406...27,727,124
JBrowse link
early endosome to Golgi transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl8b ARF like GTPase 8B involved_in ISO (PMID:36282215) RGD PMID:36282215 NCBI chr 4:143,304,597...143,348,580
Ensembl chr 4:141,748,587...141,792,596
JBrowse link
G Bltp3b bridge-like lipid transfer protein family member 3B involved_in ISO (PMID:35499567) RGD PMID:35499567 NCBI chr 7:26,068,948...26,149,033
Ensembl chr 7:24,181,644...24,261,720
JBrowse link
G Ehd3 EH-domain containing 3 involved_in ISO
IEA
(PMID:19139087)
GO_REF:0000107
RGD
Ensembl
PMID:19139087 GO_REF:0000107 NCBI chr 6:27,392,709...27,417,445
Ensembl chr 6:21,639,290...21,665,236
JBrowse link
G Lman1 lectin, mannose-binding, 1 NOT|involved_in ISO (PMID:18287528) RGD PMID:18287528 NCBI chr18:61,778,971...61,800,960
Ensembl chr18:59,508,996...59,530,851
JBrowse link
G LOC102549158 sorting nexin-1-like involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr11:27,412,769...27,414,504
Ensembl chr11:27,413,195...27,414,109
JBrowse link
G Rab14 RAB14, member RAS oncogene family involved_in ISO
IEA
(PMID:36282215)
GO_REF:0000107
RGD
Ensembl
PMID:36282215 GO_REF:0000107 NCBI chr 3:38,899,430...38,920,572
Ensembl chr 3:18,501,963...18,523,172
JBrowse link
G Rab4b RAB4B, member RAS oncogene family involved_in ISO
IEA
(PMID:36282215)
GO_REF:0000107
RGD
Ensembl
PMID:36282215 GO_REF:0000107 NCBI chr 1:82,461,396...82,472,784
Ensembl chr 1:82,461,396...82,472,763
JBrowse link
G Rab6a RAB6A, member RAS oncogene family involved_in ISO
IEA
(PMID:17562788)
GO_REF:0000107
RGD
Ensembl
PMID:17562788 GO_REF:0000107 NCBI chr 1:154,957,870...155,008,922
Ensembl chr 1:154,958,189...154,996,715
JBrowse link
G Rbsn rabenosyn, RAB effector involved_in ISO (PMID:19139087) RGD PMID:19139087 NCBI chr 4:124,682,228...124,712,578
Ensembl chr 4:124,683,969...124,712,578
JBrowse link
G Rufy1 RUN and FYVE domain containing 1 involved_in ISO (PMID:36282215) RGD PMID:36282215 NCBI chr10:35,206,801...35,251,696
Ensembl chr10:34,705,741...34,750,644
JBrowse link
G Snx1 sorting nexin 1 involved_in ISO
IBA
IEA
(PMID:15498486)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:15498486 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:75,515,780...75,565,487
Ensembl chr 8:66,630,086...66,670,360
JBrowse link
G Snx2 sorting nexin 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:48,800,594...48,842,158
Ensembl chr18:46,602,284...46,643,865
JBrowse link
G Snx8 sorting nexin 8 involved_in ISO
IBA
(PMID:19782049)
GO_REF:0000033
RGD
GO_Central
PMID:19782049 GO_REF:0000033 NCBI chr12:14,251,829...14,300,435
Ensembl chr12:14,251,859...14,300,432
JBrowse link
G Stx5 syntaxin 5 involved_in ISO (PMID:17389686) RGD PMID:17389686 NCBI chr 1:215,066,532...215,082,685
Ensembl chr 1:205,637,413...205,653,563
JBrowse link
G Surf4 surfeit 4 NOT|involved_in ISO (PMID:18287528) RGD PMID:18287528 NCBI chr 3:30,646,435...30,659,641
Ensembl chr 3:10,241,837...10,263,315
JBrowse link
G Tmed9 transmembrane p24 trafficking protein 9 NOT|involved_in ISO (PMID:18287528) RGD PMID:18287528 NCBI chr17:9,034,797...9,039,311
Ensembl chr17:9,029,646...9,034,176
JBrowse link
G Trappc10 trafficking protein particle complex subunit 10 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:10,438,404...10,498,740
Ensembl chr20:10,438,737...10,499,074
JBrowse link
early endosome to late endosome transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aktip AKT interacting protein involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:18799622)
UniProt
Ensembl
RGD
PMID:18799622 GO_REF:0000024 GO_REF:0000107 NCBI chr19:15,866,811...15,877,123
Ensembl chr19:15,866,928...15,886,663
JBrowse link
G Ankrd27 ankyrin repeat domain 27 acts_upstream_of_or_within
involved_in
ISO
IBA
(PMID:16525121)
GO_REF:0000033
RGD
GO_Central
PMID:16525121 GO_REF:0000033 NCBI chr 1:88,251,216...88,303,615
Ensembl chr 1:88,251,226...88,303,615
JBrowse link
G Atg14 autophagy related 14 involved_in ISO (PMID:14617358) RGD PMID:14617358 NCBI chr15:23,275,457...23,306,817
Ensembl chr15:20,795,750...20,827,113
JBrowse link
G Becn1 beclin 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:14617358), (PMID:26783301)
UniProt
RGD
PMID:14617358 PMID:26783301 GO_REF:0000024 NCBI chr10:86,731,649...86,747,002
Ensembl chr10:86,231,388...86,246,742
JBrowse link
G Emp2 epithelial membrane protein 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:18400107)
UniProt
RGD
PMID:18400107 GO_REF:0000024 NCBI chr10:5,866,869...5,901,533
Ensembl chr10:5,360,073...5,394,733
JBrowse link
G Fhip1b FHF complex subunit HOOK interacting protein 1B involved_in ISO
IBA
IEA
ISS
(PMID:18799622)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024
RGD
GO_Central
Ensembl
UniProt
PMID:18799622 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:159,718,679...159,748,449
Ensembl chr 1:159,726,004...159,748,408
JBrowse link
G Flna filamin A acts_upstream_of_or_within ISO (PMID:9412467) RGD PMID:9412467 NCBI chr  X:157,159,051...157,185,559
Ensembl chr  X:152,007,758...152,031,052
JBrowse link
G Hap1 huntingtin-associated protein 1 TAS RGD PMID:12021262 RGD:625566 NCBI chr10:85,778,267...85,786,553
Ensembl chr10:85,277,890...85,286,126
JBrowse link
G Hook1 hook microtubule-tethering protein 1 involved_in ISO (PMID:18799622) RGD PMID:18799622 NCBI chr 5:115,940,199...116,003,482
Ensembl chr 5:110,824,501...110,887,787
JBrowse link
G Hook2 hook microtubule-tethering protein 2 involved_in ISO (PMID:18799622) RGD PMID:18799622 NCBI chr19:40,056,732...40,075,027
Ensembl chr19:23,151,870...23,164,181
JBrowse link
G Hook3 hook microtubule-tethering protein 3 involved_in ISO (PMID:18799622) RGD PMID:18799622 NCBI chr16:72,656,929...72,751,696
Ensembl chr16:65,954,350...66,061,338
JBrowse link
G Kif16b kinesin family member 16B involved_in ISO (PMID:15882625) RGD PMID:15882625 NCBI chr 3:150,428,233...150,707,755
Ensembl chr 3:129,974,800...130,254,019
JBrowse link
G Lmtk2 lemur tyrosine kinase 2 involved_in ISO (PMID:18429820) RGD PMID:18429820 NCBI chr12:15,540,428...15,622,392
Ensembl chr12:10,426,777...10,508,750
JBrowse link
G Pik3c3 phosphatidylinositol 3-kinase, catalytic subunit type 3 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:14617358)
UniProt
Ensembl
RGD
PMID:14617358 GO_REF:0000024 GO_REF:0000107 NCBI chr18:22,119,677...22,203,546
Ensembl chr18:21,845,295...21,929,048
JBrowse link
G Pik3r4 phosphoinositide-3-kinase, regulatory subunit 4 involved_in ISO (PMID:14617358) RGD PMID:14617358 NCBI chr 8:115,146,660...115,195,326
Ensembl chr 8:106,267,954...106,316,584
JBrowse link
G Ptpn23 protein tyrosine phosphatase, non-receptor type 23 involved_in ISO
IBA
IEA
(PMID:24821423)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:24821423 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:110,360,804...110,383,271
Ensembl chr 8:110,360,804...110,383,271
JBrowse link
G Rab5a RAB5A, member RAS oncogene family involved_in ISO (PMID:17562788) RGD PMID:17562788 NCBI chr 9:6,720,057...6,749,456
Ensembl chr 9:6,484,469...6,512,873
JBrowse link
G Rab7a RAB7A, member RAS oncogene family involved_in ISO
ISS
(PMID:14617358)
GO_REF:0000024
(PMID:8522602)
RGD
UniProt
PMID:8522602 PMID:14617358 GO_REF:0000024 NCBI chr 4:122,019,281...122,068,067
Ensembl chr 4:120,461,963...120,506,889
JBrowse link
G Rilp Rab interacting lysosomal protein involved_in ISO
IBA
(PMID:17959629)
GO_REF:0000033
RGD
GO_Central
PMID:17959629 GO_REF:0000033 NCBI chr10:60,853,316...60,857,096
Ensembl chr10:60,355,278...60,358,781
JBrowse link
G Snf8 SNF8 subunit of ESCRT-II involved_in ISO (PMID:17714434) RGD PMID:17714434 NCBI chr10:80,984,337...80,996,724
Ensembl chr10:80,984,363...80,996,734
JBrowse link
G Snx16 sorting nexin 16 involved_in IDA
IBA
IEA
ISO
GO_REF:0000033
GO_REF:0000107
(PMID:12813048)
GO_Central
Ensembl
RGD
PMID:12813048 PMID:12813048 GO_REF:0000033 GO_REF:0000107, RGD:737670 NCBI chr 2:93,242,779...93,265,048
Ensembl chr 2:91,336,092...91,357,619
JBrowse link
G Stx8 syntaxin 8 involved_in ISO
IEA
(PMID:10564279)
GO_REF:0000107
RGD
Ensembl
PMID:10564279 GO_REF:0000107 NCBI chr10:53,154,572...53,393,912
Ensembl chr10:52,654,990...52,894,993
JBrowse link
G Washc1 WASH complex subunit 1 involved_in ISO (PMID:20175130) RGD PMID:20175130 NCBI chr 9:113,169,730...113,179,829
Ensembl chr 9:105,722,899...105,733,009
JBrowse link
G Wdr81 WD repeat domain 81 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:26783301), (PMID:27126989)
UniProt
Ensembl
RGD
PMID:26783301 PMID:27126989 GO_REF:0000024 GO_REF:0000107 NCBI chr10:60,780,268...60,793,671
Ensembl chr10:60,281,972...60,295,296
JBrowse link
G Wdr91 WD repeat domain 91 involved_in ISO
IBA
ISS
(PMID:26783301), (PMID:27126989)
GO_REF:0000033
GO_REF:0000024
RGD
GO_Central
UniProt
PMID:26783301 PMID:27126989 GO_REF:0000024 GO_REF:0000033 NCBI chr 4:63,554,364...63,591,733
Ensembl chr 4:63,554,364...63,591,733
JBrowse link
early endosome to recycling endosome transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Coro1a coronin 1A acts_upstream_of_or_within ISO MGI:3778894 (PMID:24270184) RGD PMID:24270184 NCBI chr 1:190,726,129...190,731,133
Ensembl chr 1:181,295,562...181,300,534
JBrowse link
G Dync1li1 dynein cytoplasmic 1 light intermediate chain 1 involved_in ISO
IEA
(PMID:20026645)
GO_REF:0000107
RGD
Ensembl
PMID:20026645 GO_REF:0000107 NCBI chr 8:123,254,823...123,288,496
Ensembl chr 8:114,376,662...114,410,934
JBrowse link
G Myo1d myosin ID involved_in ISO (PMID:11208135) RGD PMID:11208135 NCBI chr10:65,986,900...66,263,538
Ensembl chr10:65,489,154...65,766,349
JBrowse link
G Rab11a RAB11a, member RAS oncogene family involved_in ISO (PMID:20026645) RGD PMID:20026645 NCBI chr 8:65,223,698...65,246,461
Ensembl chr 8:65,222,949...65,246,525
JBrowse link
G Rab11fip3 RAB11 family interacting protein 3 involved_in ISO (PMID:20026645) RGD PMID:20026645 NCBI chr10:15,507,151...15,591,173
Ensembl chr10:15,002,926...15,118,479
JBrowse link
endocytic recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acap2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 involved_in IMP PMID:23572513 UniProt PMID:23572513 RGD:8554201 NCBI chr11:83,043,442...83,159,105
Ensembl chr11:69,538,546...69,654,151
JBrowse link
G Ankrd27 ankyrin repeat domain 27 involved_in ISO (PMID:24856514) RGD PMID:24856514 NCBI chr 1:88,251,216...88,303,615
Ensembl chr 1:88,251,226...88,303,615
JBrowse link
G Ankrd50 ankyrin repeat domain containing 50 involved_in ISO (PMID:25278552) RGD PMID:25278552 NCBI chr 2:121,466,275...121,500,758
Ensembl chr 2:121,468,573...121,500,752
JBrowse link
G Arf6 ARF GTPase 6 involved_in ISO
IDA
(PMID:10036235)
PMID:26446845
RGD PMID:10036235 PMID:26446845 RGD:11554955 NCBI chr 6:93,589,777...93,590,925
Ensembl chr 6:87,840,142...87,874,114
JBrowse link
G Arl4c ARF like GTPase 4C involved_in ISO
IBA
(PMID:19409876)
GO_REF:0000033
RGD
GO_Central
PMID:19409876 GO_REF:0000033 NCBI chr 9:96,748,075...96,751,510
Ensembl chr 9:89,298,005...89,304,513
JBrowse link
G Bltp1 bridge-like lipid transfer protein family member 1 involved_in ISO (PMID:30906834) RGD PMID:30906834 NCBI chr 2:119,708,114...119,924,697
Ensembl chr 2:119,708,209...119,924,695
JBrowse link
G Ccdc22 coiled-coil domain containing 22 involved_in ISO
ISS
(PMID:28892079)
GO_REF:0000024
RGD
UniProt
PMID:28892079 GO_REF:0000024 NCBI chr  X:17,570,184...17,582,130
Ensembl chr  X:14,898,296...14,910,244
JBrowse link
G Ccdc93 coiled-coil domain containing 93 involved_in ISO
IEA
ISS
(PMID:28892079)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:28892079 GO_REF:0000024 GO_REF:0000107 NCBI chr13:35,160,354...35,233,877
Ensembl chr13:32,607,587...32,676,023
JBrowse link
G Cmtm6 CKLF-like MARVEL transmembrane domain containing 6 involved_in ISO (PMID:28813417) RGD PMID:28813417 NCBI chr 8:123,301,131...123,319,230
Ensembl chr 8:114,422,921...114,441,033
JBrowse link
G Dennd1a DENN domain containing 1A involved_in IBA
ISO
GO_REF:0000033
(PMID:20159556)
GO_Central
RGD
PMID:20159556 GO_REF:0000033 NCBI chr 3:21,564,749...22,052,057
Ensembl chr 3:21,564,749...22,052,062
JBrowse link
G Dennd1b DENN domain containing 1B involved_in IBA
ISO
GO_REF:0000033
(PMID:26774822)
GO_Central
RGD
PMID:26774822 GO_REF:0000033 NCBI chr13:53,096,717...53,324,372
Ensembl chr13:50,545,836...50,770,601
JBrowse link
G Dennd1c DENN domain containing 1C involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:1,991,035...2,003,330
Ensembl chr 9:1,904,045...1,916,187
JBrowse link
G Ehd1 EH-domain containing 1 involved_in ISO
IBA
ISS
UniProtKB:G5ECC3|UniProtKB:G5EEU7 (PMID:15020713), (PMID:17233914)
GO_REF:0000033
GO_REF:0000024
RGD
GO_Central
UniProt
PMID:15020713 PMID:17233914 GO_REF:0000024 GO_REF:0000033 NCBI chr 1:203,579,850...203,602,226
Ensembl chr 1:203,579,869...203,602,212
JBrowse link
G Ehd2 EH-domain containing 2 involved_in ISO
IBA
ISS
UniProtKB:G5ECC3|UniProtKB:G5EEU7 (PMID:17233914)
GO_REF:0000033
GO_REF:0000024
RGD
GO_Central
UniProt
PMID:17233914 GO_REF:0000024 GO_REF:0000033 NCBI chr 1:85,767,757...85,786,974
Ensembl chr 1:76,637,482...76,658,783
JBrowse link
G Ehd3 EH-domain containing 3 involved_in ISO
IBA
ISS
IEA
(PMID:17233914)
GO_REF:0000033
GO_REF:0000024
GO_REF:0000107
RGD
GO_Central
UniProt
Ensembl
PMID:17233914 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:27,392,709...27,417,445
Ensembl chr 6:21,639,290...21,665,236
JBrowse link
G Ehd4 EH-domain containing 4 involved_in ISO
IBA
UniProtKB:G5ECC3|UniProtKB:G5EEU7 (PMID:17233914)
GO_REF:0000033
RGD
GO_Central
PMID:17233914 GO_REF:0000033 NCBI chr 3:107,058,191...107,121,985
Ensembl chr 3:107,058,958...107,122,002
JBrowse link
G Eipr1 EARP complex and GARP complex interacting protein 1 involved_in IMP PMID:3172165 UniProt PMID:3172165 RGD:25671404 NCBI chr 6:51,116,827...51,230,453
Ensembl chr 6:45,388,376...45,502,083
JBrowse link
G Entr1 endosome associated trafficking regulator 1 involved_in ISO (PMID:25278552) RGD PMID:25278552 NCBI chr 3:29,599,059...29,605,780
Ensembl chr 3:9,200,967...9,207,688
JBrowse link
G Epg5 ectopic P-granules 5 autophagy tethering factor acts_upstream_of_or_within ISO MGI:5505596 (PMID:23479740) RGD PMID:23479740 NCBI chr18:73,679,106...73,776,694
Ensembl chr18:71,404,010...71,501,502
JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 IMP RGD PMID:21832070 RGD:9685531 NCBI chr 5:129,274,487...129,374,856
Ensembl chr 5:124,045,926...124,146,221
JBrowse link
G Fcgr2b Fc gamma receptor 2B IDA RGD PMID:17680646 RGD:9588617 NCBI chr13:85,725,897...85,740,517
Ensembl chr13:83,193,163...83,207,778
JBrowse link
G Gga3 golgi associated, gamma adaptin ear containing, ARF binding protein 3 involved_in IDA PMID:26446845 UniProt PMID:26446845 RGD:11554955 NCBI chr10:100,825,427...100,843,422
Ensembl chr10:100,825,426...100,844,462
JBrowse link
G Hgs hepatocyte growth factor-regulated tyrosine kinase substrate involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:105,739,617...105,757,838
Ensembl chr10:105,739,296...105,757,835
JBrowse link
G Lmtk2 lemur tyrosine kinase 2 involved_in ISO
IBA
(PMID:18029400)
GO_REF:0000033
RGD
GO_Central
PMID:18029400 GO_REF:0000033 NCBI chr12:15,540,428...15,622,392
Ensembl chr12:10,426,777...10,508,750
JBrowse link
G Micall1 MICAL-like 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:19864458)
UniProt
RGD
PMID:19864458 GO_REF:0000024 NCBI chr 7:112,557,192...112,587,618
Ensembl chr 7:110,676,775...110,707,177
JBrowse link
G Micall2 MICAL-like 2 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(PMID:18094055)
(PMID:16525024)
UniProt
RGD
PMID:16525024 PMID:18094055 GO_REF:0000024 NCBI chr12:20,013,037...20,041,795
Ensembl chr12:14,899,157...14,927,946
JBrowse link
G Ptpn23 protein tyrosine phosphatase, non-receptor type 23 involved_in IEA
IBA
ISO
GO_REF:0000107
GO_REF:0000033
(PMID:24821423)
Ensembl
GO_Central
RGD
PMID:24821423 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:110,360,804...110,383,271
Ensembl chr 8:110,360,804...110,383,271
JBrowse link
G Rab11b RAB11B, member RAS oncogene family involved_in ISS
ISO
GO_REF:0000024
(PMID:19244346)
UniProt
RGD
PMID:19244346 GO_REF:0000024 NCBI chr 7:15,223,613...15,236,754
Ensembl chr 7:14,521,368...14,534,593
JBrowse link
G Rab11fip3 RAB11 family interacting protein 3 involved_in ISO (PMID:17394487) RGD PMID:17394487 NCBI chr10:15,507,151...15,591,173
Ensembl chr10:15,002,926...15,118,479
JBrowse link
G Rab11fip4 RAB11 family interacting protein 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:64,550,109...64,658,123
Ensembl chr10:64,550,177...64,654,759
JBrowse link
G Rab12 RAB12, member RAS oncogene family involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:113,927,119...113,953,722
Ensembl chr 9:106,480,301...106,506,910
JBrowse link
G Rab13 RAB13, member RAS oncogene family involved_in ISO
IBA
IEA
ISS
(PMID:15528189)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024
(PMID:18094055)
RGD
GO_Central
Ensembl
UniProt
PMID:15528189 PMID:18094055 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:177,972,535...177,977,679
Ensembl chr 2:175,675,005...175,680,036
JBrowse link
G Rab14 RAB14, member RAS oncogene family involved_in ISO
IEA
ISS
(PMID:22595670)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:22595670 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:38,899,430...38,920,572
Ensembl chr 3:18,501,963...18,523,172
JBrowse link
G Rab17 RAB17, member RAS oncogene family involved_in IBA
ISO
GO_REF:0000033
(PMID:9490718)
GO_Central
RGD
PMID:9490718 GO_REF:0000033 NCBI chr 9:91,552,924...91,566,759
Ensembl chr 9:91,553,464...91,566,451
JBrowse link
G Rab35 RAB35, member RAS oncogene family involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:46,627,302...46,642,815
Ensembl chr12:40,967,103...40,991,195
JBrowse link
G Rab8a RAB8A, member RAS oncogene family involved_in ISO
IBA
(PMID:18094055)
GO_REF:0000033
RGD
GO_Central
PMID:18094055 GO_REF:0000033 NCBI chr16:17,688,049...17,709,412
Ensembl chr16:17,654,034...17,675,678
JBrowse link
G Rab8b RAB8B, member RAS oncogene family involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:76,340,106...76,417,638
Ensembl chr 8:67,458,923...67,536,384
JBrowse link
G Slc18a2 solute carrier family 18 member A2 IEP RGD PMID:20534840 RGD:5130935 NCBI chr 1:268,399,815...268,435,229
Ensembl chr 1:258,413,959...258,448,325
JBrowse link
G Snf8 SNF8 subunit of ESCRT-II involved_in ISO (PMID:17714434) RGD PMID:17714434 NCBI chr10:80,984,337...80,996,724
Ensembl chr10:80,984,363...80,996,734
JBrowse link
G Snx12 sorting nexin 12 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:66,226,995...66,356,945
Ensembl chr  X:66,227,053...66,356,950
JBrowse link
G Snx17 sorting nexin 17 involved_in ISO
IBA
IEA
ISS
(PMID:28892079)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024
RGD
GO_Central
Ensembl
UniProt
PMID:28892079 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:25,177,528...25,183,001
Ensembl chr 6:25,177,391...25,183,030
JBrowse link
G Snx27 sorting nexin 27 involved_in ISS
IBA
IEA
ISO
GO_REF:0000024
GO_REF:0000033
GO_REF:0000107
(PMID:20733053), (PMID:21602791), (PMID:23563491)
UniProt
GO_Central
Ensembl
RGD
PMID:20733053 PMID:21602791 PMID:23563491 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:184,824,930...184,907,931
Ensembl chr 2:182,135,905...182,218,906
JBrowse link
G Snx3 sorting nexin 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:47,574,051...47,607,577
Ensembl chr20:45,992,720...46,025,379
JBrowse link
G Snx30 sorting nexin family member 30 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:74,683,902...74,813,013
Ensembl chr 5:74,684,015...74,792,631
JBrowse link
G Snx31 sorting nexin 31 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:67,676,514...67,776,925
Ensembl chr 7:67,676,524...67,732,086
JBrowse link
G Snx4 sorting nexin 4 involved_in ISO (PMID:17994011) RGD PMID:17994011 NCBI chr11:67,460,872...67,518,143
Ensembl chr11:67,460,870...67,518,174
JBrowse link
G Snx7 sorting nexin 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:205,843,164...205,927,737
Ensembl chr 2:205,842,837...205,927,763
JBrowse link
G Stx12 syntaxin 12 involved_in IDA PMID:30962439 UniProt PMID:30962439 RGD:152995575 NCBI chr 5:150,347,554...150,376,426
Ensembl chr 5:145,063,587...145,092,377
JBrowse link
G Stx16 syntaxin 16 involved_in ISO (PMID:23677696) RGD PMID:23677696 NCBI chr 3:183,271,417...183,300,746
Ensembl chr 3:162,853,782...162,882,489
JBrowse link
G Stx6 syntaxin 6 acts_upstream_of_or_within
involved_in
ISO
IDA
(PMID:25799061)
PMID:30962439
(PMID:23677696)
RGD PMID:23677696 PMID:25799061 PMID:30962439 RGD:152995575 NCBI chr13:69,882,647...69,928,895
Ensembl chr13:67,332,314...67,378,576
JBrowse link
G Vamp4 vesicle-associated membrane protein 4 involved_in ISO (PMID:23677696) RGD PMID:23677696 NCBI chr13:77,453,135...77,475,909
Ensembl chr13:74,919,880...74,933,686
JBrowse link
G Vps26a VPS26 retromer complex component A involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:21602791)
UniProt
Ensembl
RGD
PMID:21602791 GO_REF:0000024 GO_REF:0000107 NCBI chr20:30,404,320...30,434,266
Ensembl chr20:30,404,325...30,434,131
JBrowse link
G Vps26c VPS26 endosomal protein sorting factor C involved_in ISO (PMID:28892079) RGD PMID:28892079 NCBI chr11:47,283,764...47,311,105
Ensembl chr11:33,792,389...33,841,447
JBrowse link
G Vps29 VPS29 retromer complex component involved_in ISO
IEA
ISS
(PMID:28892079)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:28892079 GO_REF:0000024 GO_REF:0000107 NCBI chr12:39,869,688...39,878,732
Ensembl chr12:34,207,263...34,217,964
JBrowse link
G Vps35 VPS35 retromer complex component involved_in ISO (PMID:20164305), (PMID:21602791) RGD PMID:20164305 PMID:21602791 NCBI chr19:37,938,989...37,974,887
Ensembl chr19:21,765,749...21,801,618
JBrowse link
G Vps35l VPS35 endosomal protein sorting factor like involved_in ISO
IBA
IEA
ISS
(PMID:28892079)
GO_REF:0000033
GO_REF:0000002
GO_REF:0000107
GO_REF:0000024
RGD
GO_Central
InterPro
Ensembl
UniProt
PMID:28892079 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:173,076,219...173,179,663
Ensembl chr 1:173,076,099...173,180,610
JBrowse link
G Vps39 VPS39 subunit of HOPS complex involved_in ISO (PMID:25266290) RGD PMID:25266290 NCBI chr 3:127,721,076...127,758,658
Ensembl chr 3:107,267,310...107,304,975
JBrowse link
G Vps50 VPS50 subunit of EARP/GARPII complex involved_in
acts_upstream_of_or_within
ISO
IBA
IEA
ISS
(PMID:25799061)
GO_REF:0000033
GO_REF:0000002
GO_REF:0000024
RGD
GO_Central
InterPro
UniProt
PMID:25799061 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 NCBI chr 4:32,439,101...32,540,299
Ensembl chr 4:31,484,463...31,585,617
JBrowse link
G Vps51 VPS51 subunit of GARP complex involved_in ISO
IBA
(PMID:25799061)
GO_REF:0000033
RGD
GO_Central
PMID:25799061 GO_REF:0000033 NCBI chr 1:212,789,721...212,799,708
Ensembl chr 1:203,360,440...203,370,430
JBrowse link
G Vps52 VPS52 subunit of GARP complex involved_in ISO
IBA
ISS
(PMID:25799061)
GO_REF:0000033
GO_REF:0000024
RGD
GO_Central
UniProt
PMID:25799061 GO_REF:0000024 GO_REF:0000033 NCBI chr20:4,922,599...4,933,458
Ensembl chr20:4,860,843...4,931,665
JBrowse link
G Vps53 VPS53 subunit of GARP complex involved_in ISO (PMID:25799061) RGD PMID:25799061 NCBI chr10:61,418,076...61,536,912
Ensembl chr10:60,919,820...61,038,676
JBrowse link
G Vti1a vesicle transport through interaction with t-SNAREs 1A involved_in ISO (PMID:23677696) RGD PMID:23677696 NCBI chr 1:264,361,538...264,667,171
Ensembl chr 1:254,356,429...254,661,852
JBrowse link
G Washc1 WASH complex subunit 1 involved_in ISO
IBA
(PMID:22114305)
(PMID:23275443)
GO_REF:0000033
RGD
GO_Central
PMID:22114305 PMID:23275443 GO_REF:0000033 NCBI chr 9:113,169,730...113,179,829
Ensembl chr 9:105,722,899...105,733,009
JBrowse link
G Washc1-ps2 WASH complex subunit 1, pseudogene 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:106,097,337...106,103,219
Ensembl chr 9:106,097,498...106,100,342
Ensembl chr 9:106,097,498...106,100,342
JBrowse link
G Washc2c WASH complex subunit 2C involved_in ISO (PMID:25278552) RGD PMID:25278552 NCBI chr 4:150,912,863...150,998,301
Ensembl chr 4:149,267,924...149,325,851
JBrowse link
G Wipf3 WAS/WASL interacting protein family, member 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:83,550,075...83,629,929
Ensembl chr 4:83,550,468...83,629,386
JBrowse link
endosome to lysosome transport via multivesicular body sorting pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lyst lysosomal trafficking regulator involved_in ISO (PMID:9606205) RGD PMID:9606205 NCBI chr17:93,225,509...93,427,650
Ensembl chr17:86,241,384...86,443,480
JBrowse link
G Mvb12a multivesicular body subunit 12A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:18,286,231...18,291,096
Ensembl chr16:18,252,222...18,257,539
JBrowse link
G Ubxn6 UBX domain protein 6 involved_in ISO (PMID:21822278) RGD PMID:21822278 NCBI chr 9:900,883...906,047
Ensembl chr 9:900,884...906,124
JBrowse link
G Vcp valosin-containing protein involved_in ISS
ISO
GO_REF:0000024
(PMID:21822278)
UniProt
RGD
PMID:21822278 GO_REF:0000024 NCBI chr 5:62,005,984...62,025,387
Ensembl chr 5:57,210,168...57,229,571
JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B involved_in ISO (PMID:15024011) RGD PMID:15024011 NCBI chr13:23,421,758...23,446,848
Ensembl chr13:22,907,109...22,932,229
JBrowse link
endosome to plasma membrane protein transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp6ap1 ATPase H+ transporting accessory protein 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:22467241)
UniProt
Ensembl
RGD
PMID:22467241 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:157,231,243...157,238,323
Ensembl chr  X:152,079,865...152,087,034
JBrowse link
G Rab7a RAB7A, member RAS oncogene family involved_in ISS
ISO
GO_REF:0000024
(PMID:33147445)
UniProt
RGD
PMID:33147445 GO_REF:0000024 NCBI chr 4:122,019,281...122,068,067
Ensembl chr 4:120,461,963...120,506,889
JBrowse link
G Scarb2 scavenger receptor class B, member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2654430 (PMID:16901941)
Ensembl
RGD
PMID:16901941 GO_REF:0000107 NCBI chr14:15,842,583...15,894,123
Ensembl chr14:15,558,236...15,609,813
JBrowse link
G Snx27 sorting nexin 27 IMP RGD PMID:25136126 RGD:13508597 NCBI chr 2:184,824,930...184,907,931
Ensembl chr 2:182,135,905...182,218,906
JBrowse link
G Sorl1 sortilin related receptor 1 involved_in ISO (PMID:27322061) RGD PMID:27322061 NCBI chr 8:51,238,713...51,401,458
Ensembl chr 8:42,341,704...42,504,513
JBrowse link
G Trarg1 trafficking regulator of GLUT4 (SLC2A4) 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(PMID:26240143)
(PMID:26629404)
UniProt
RGD
PMID:26240143 PMID:26629404 GO_REF:0000024 NCBI chr10:61,521,107...61,541,494
Ensembl chr10:61,521,107...61,541,494
JBrowse link
G Washc1 WASH complex subunit 1 acts_upstream_of_or_within ISO (PMID:26965651) RGD PMID:26965651 NCBI chr 9:113,169,730...113,179,829
Ensembl chr 9:105,722,899...105,733,009
JBrowse link
endosome transport via multivesicular body sorting pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chmp1a charged multivesicular body protein 1A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:68,146,672...68,154,952
Ensembl chr19:51,238,160...51,246,436
JBrowse link
G Chmp1b2 charged multivesicular body protein 1B2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:72,860,409...72,901,232
Ensembl chr  X:72,860,409...72,901,246
JBrowse link
G Chmp2b charged multivesicular body protein 2B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:16,783,971...16,810,500
Ensembl chr11:3,337,494...3,385,181
JBrowse link
G Chmp3 charged multivesicular body protein 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:105,134,860...105,180,862
Ensembl chr 4:103,576,515...103,623,959
JBrowse link
G Dennd10 DENN domain containing 10 involved_in ISO (PMID:30771381) RGD PMID:30771381 NCBI chr 1:259,950,955...259,974,459
Ensembl chr 1:259,950,866...259,974,455
JBrowse link
G Laptm4b lysosomal protein transmembrane 4 beta involved_in ISO
IEA
ISS
(PMID:25588945)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:25588945 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:65,434,525...65,477,386
Ensembl chr 7:65,434,394...65,477,383
JBrowse link
G Rilp Rab interacting lysosomal protein involved_in ISO (PMID:17010938) RGD PMID:17010938 NCBI chr10:60,853,316...60,857,096
Ensembl chr10:60,355,278...60,358,781
JBrowse link
G Sort1 sortilin 1 involved_in ISO
IEA
(PMID:11331584)
GO_REF:0000107
RGD
Ensembl
PMID:11331584 GO_REF:0000107 NCBI chr 2:198,609,466...198,690,481
Ensembl chr 2:195,924,099...196,002,354
JBrowse link
G Vps28 VPS28 subunit of ESCRT-I involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:110,222,638...110,226,486
Ensembl chr 7:108,341,989...108,345,837
JBrowse link
late endosome to Golgi transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap5z1 adaptor related protein complex 5 subunit zeta 1 acts_upstream_of_or_within ISO MGI:4460281 (PMID:30930081) RGD PMID:30930081 NCBI chr12:12,093,834...12,109,043
Ensembl chr12:12,093,834...12,108,511
JBrowse link
G Gcc2 GRIP and coiled-coil domain containing 2 involved_in ISO
IBA
ISS
(PMID:16885419)
GO_REF:0000033
GO_REF:0000024
RGD
GO_Central
UniProt
PMID:16885419 GO_REF:0000024 GO_REF:0000033 NCBI chr20:26,788,472...26,836,728
Ensembl chr20:26,247,404...26,293,613
JBrowse link
G Rab7b Rab7b, member RAS oncogene family involved_in ISO (PMID:20375062) RGD PMID:20375062 NCBI chr13:45,673,396...45,699,798
Ensembl chr13:43,121,226...43,147,581
JBrowse link
G Sgsm2 small G protein signaling modulator 2 involved_in ISO (PMID:21808068) RGD PMID:21808068 NCBI chr10:60,216,556...60,258,199
Ensembl chr10:59,718,183...59,759,447
JBrowse link
G Snx12 sorting nexin 12 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:66,226,995...66,356,945
Ensembl chr  X:66,227,053...66,356,950
JBrowse link
G Snx3 sorting nexin 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:47,574,051...47,607,577
Ensembl chr20:45,992,720...46,025,379
JBrowse link
late endosome to vacuole transport via multivesicular body sorting pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chmp4bl1 chromatin modifying protein 4B-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:68,049,742...68,050,791
Ensembl chr 4:68,049,705...68,050,676
JBrowse link
G Chmp4c charged multivesicular body protein 4C involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:93,299,152...93,336,075
Ensembl chr 2:91,388,530...91,428,668
JBrowse link
G Chmp5 charged multivesicular body protein 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:60,877,369...60,894,512
Ensembl chr 5:56,081,343...56,098,529
JBrowse link
G Chmp6 charged multivesicular body protein 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:105,690,400...105,696,070
Ensembl chr10:105,191,950...105,197,640
JBrowse link
G Chmp7 charged multivesicular body protein 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:51,200,759...51,215,992
Ensembl chr15:44,790,996...44,806,216
JBrowse link
G Leprot leptin receptor overlapping transcript involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:116,289,843...116,301,951
Ensembl chr 5:116,289,822...116,301,988
JBrowse link
G Leprotl1 leptin receptor overlapping transcript-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:58,040,934...58,053,602
Ensembl chr16:58,040,960...58,053,593
JBrowse link
G Tmem50a transmembrane protein 50A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:147,123,670...147,138,859
Ensembl chr 5:147,123,688...147,138,849
JBrowse link
G Vta1 vesicle trafficking 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:9,032,861...9,080,635
Ensembl chr 1:9,032,335...9,080,635
JBrowse link
multivesicular body-lysosome fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chmp3 charged multivesicular body protein 3 involved_in ISO (PMID:16554368) RGD PMID:16554368 NCBI chr 4:105,134,860...105,180,862
Ensembl chr 4:103,576,515...103,623,959
JBrowse link
negative regulation of early endosome to late endosome transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Snx12 sorting nexin 12 involved_in ISO (PMID:22719997) RGD PMID:22719997 NCBI chr  X:66,226,995...66,356,945
Ensembl chr  X:66,227,053...66,356,950
JBrowse link
G Snx3 sorting nexin 3 involved_in ISO (PMID:18767904) RGD PMID:18767904 NCBI chr20:47,574,051...47,607,577
Ensembl chr20:45,992,720...46,025,379
JBrowse link
negative regulation of endocytic recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgap1 Rho GTPase activating protein 1 involved_in ISO
IBA
(PMID:16380373)
GO_REF:0000033
RGD
GO_Central
PMID:16380373 GO_REF:0000033 NCBI chr 3:98,077,064...98,099,163
Ensembl chr 3:77,620,655...77,643,396
JBrowse link
G Arhgap8 Rho GTPase activating protein 8 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:115,842,223...115,902,094
Ensembl chr 7:115,850,654...115,902,093
JBrowse link
G Mtmr4 myotubularin related protein 4 involved_in ISO (PMID:20736309) RGD PMID:20736309 NCBI chr10:72,890,665...72,913,598
Ensembl chr10:72,392,551...72,416,342
JBrowse link
negative regulation of retrograde transport, endosome to Golgi term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arfip1 ARF interacting protein 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:25789876)
Ensembl
RGD
PMID:25789876 GO_REF:0000107 NCBI chr 2:169,843,804...169,924,136
Ensembl chr 2:169,843,801...169,923,142
JBrowse link
neurotransmitter receptor transport, endosome to plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myo5b myosin Vb involved_in IDA
IMP
PMID:18984164 SynGO PMID:18984164 PMID:18984164 RGD:11533643, RGD:11533643 NCBI chr18:68,038,759...68,341,568
Ensembl chr18:68,038,759...68,338,745
JBrowse link
G Vps35 VPS35 retromer complex component involved_in ISO (PMID:27460146) RGD PMID:27460146 NCBI chr19:37,938,989...37,974,887
Ensembl chr19:21,765,749...21,801,618
JBrowse link
neurotransmitter receptor transport, endosome to postsynaptic membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Erbin erbb2 interacting protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:36,660,399...36,762,584
Ensembl chr 2:34,928,863...35,027,852
JBrowse link
G Grip1 glutamate receptor interacting protein 1 involved_in IBA
ISO
GO_REF:0000033
(PMID:20956289)
GO_Central
RGD
PMID:20956289 GO_REF:0000033 NCBI chr 7:56,820,501...57,477,877
Ensembl chr 7:54,934,250...55,592,273
JBrowse link
G Grip2 glutamate receptor interacting protein 2 involved_in IBA
ISO
GO_REF:0000033
(PMID:20956289)
GO_Central
RGD
PMID:20956289 GO_REF:0000033 NCBI chr 4:124,271,456...124,356,538
Ensembl chr 4:124,271,456...124,321,268
JBrowse link
G Lrrc1 leucine rich repeat containing 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:78,239,897...78,407,347
Ensembl chr 8:78,239,900...78,406,490
JBrowse link
G Lrrc7 leucine rich repeat containing 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:249,792,441...250,294,267
Ensembl chr 2:247,147,752...247,634,547
JBrowse link
G Nsg1 neuronal vesicle trafficking associated 1 involved_in ISO (PMID:16037816) RGD PMID:16037816 NCBI chr14:72,648,771...72,670,521
Ensembl chr14:72,648,741...72,670,514
JBrowse link
G Rab11a RAB11a, member RAS oncogene family involved_in IMP
IBA
IDA
PMID:18045925
GO_REF:0000033
GO_Central PMID:18045925 PMID:18045925 GO_REF:0000033, RGD:2306457, RGD:2306457 NCBI chr 8:65,223,698...65,246,461
Ensembl chr 8:65,222,949...65,246,525
JBrowse link
G Rab8a RAB8A, member RAS oncogene family involved_in IMP
IDA
PMID:18045925 SynGO PMID:18045925 PMID:18045925 RGD:2306457, RGD:2306457 NCBI chr16:17,688,049...17,709,412
Ensembl chr16:17,654,034...17,675,678
JBrowse link
G Scrib scribble planar cell polarity protein involved_in IDA
IBA
IMP
PMID:25310985
GO_REF:0000033
GO_Central PMID:25310985 PMID:25310985 GO_REF:0000033, RGD:12050130, RGD:12050130 NCBI chr 7:109,640,034...109,663,354
Ensembl chr 7:107,759,343...107,782,331
JBrowse link
G Vamp4 vesicle-associated membrane protein 4 involved_in IMP
IDA
PMID:34496238 SynGO PMID:34496238 PMID:34496238 RGD:405650337, RGD:405650337 NCBI chr13:77,453,135...77,475,909
Ensembl chr13:74,919,880...74,933,686
JBrowse link
G Vps35 VPS35 retromer complex component involved_in ISO (PMID:28384478) RGD PMID:28384478 NCBI chr19:37,938,989...37,974,887
Ensembl chr19:21,765,749...21,801,618
JBrowse link
positive regulation of early endosome to late endosome transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dab2 DAB adaptor protein 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:21995445)
Ensembl
RGD
PMID:21995445 GO_REF:0000107 NCBI chr 2:57,241,947...57,294,893
Ensembl chr 2:55,514,700...55,567,476
JBrowse link
G Ezr ezrin involved_in ISO
IBA
IEA
UniProtKB:P26038|UniProtKB:P35241 (PMID:21148287)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:21148287 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:49,373,033...49,416,573
Ensembl chr 1:46,967,658...47,011,505
JBrowse link
G Msn moesin involved_in ISO
IBA
IEA
UniProtKB:P15311|UniProtKB:P35241 (PMID:21148287)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:21148287 GO_REF:0000033 GO_REF:0000107 NCBI chr  X:65,005,546...65,073,512
Ensembl chr  X:60,995,951...61,065,628
JBrowse link
G Mtmr2 myotubularin related protein 2 involved_in IMP PMID:20410104 BHF-UCL PMID:20410104 RGD:8553482 NCBI chr 8:18,899,303...18,949,767
Ensembl chr 8:10,617,993...10,668,172
JBrowse link
G Nf2 NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:83,850,894...83,934,263
Ensembl chr14:79,627,399...79,710,667
JBrowse link
G Ptpn23 protein tyrosine phosphatase, non-receptor type 23 involved_in ISO
IEA
(PMID:21724833)
GO_REF:0000107
RGD
Ensembl
PMID:21724833 GO_REF:0000107 NCBI chr 8:110,360,804...110,383,271
Ensembl chr 8:110,360,804...110,383,271
JBrowse link
G Rab21 RAB21, member RAS oncogene family involved_in ISO (PMID:15561770) RGD PMID:15561770 NCBI chr 7:52,790,158...52,814,943
Ensembl chr 7:50,904,057...50,928,839
JBrowse link
G Rdx radixin involved_in ISO
IBA
UniProtKB:P15311|UniProtKB:P26038 (PMID:21148287)
GO_REF:0000033
RGD
GO_Central
PMID:21148287 GO_REF:0000033 NCBI chr 8:61,275,792...61,348,260
Ensembl chr 8:52,379,494...52,437,678
JBrowse link
G Vps11 VPS11 core subunit of CORVET and HOPS complexes involved_in ISO (PMID:21148287) RGD PMID:21148287 NCBI chr 8:44,684,129...44,698,568
Ensembl chr 8:44,684,127...44,698,568
JBrowse link
positive regulation of early endosome to recycling endosome transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sorl1 sortilin related receptor 1 involved_in ISO (PMID:22621900) RGD PMID:22621900 NCBI chr 8:51,238,713...51,401,458
Ensembl chr 8:42,341,704...42,504,513
JBrowse link
positive regulation of endocytic recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn2 actinin alpha 2 involved_in ISO (PMID:19815520) RGD PMID:19815520 NCBI chr17:62,835,055...62,902,331
Ensembl chr17:58,142,625...58,210,622
JBrowse link
G Ehd1 EH-domain containing 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:21177873)
UniProt
RGD
PMID:21177873 GO_REF:0000024 NCBI chr 1:203,579,850...203,602,226
Ensembl chr 1:203,579,869...203,602,212
JBrowse link
G Ehd2 EH-domain containing 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:21177873)
UniProt
RGD
PMID:21177873 GO_REF:0000024 NCBI chr 1:85,767,757...85,786,974
Ensembl chr 1:76,637,482...76,658,783
JBrowse link
G Eipr1 EARP complex and GARP complex interacting protein 1 involved_in ISO
ISS
IEA
(PMID:27440922)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:27440922 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:51,116,827...51,230,453
Ensembl chr 6:45,388,376...45,502,083
JBrowse link
G Pla2g4e phospholipase A2, group IVE involved_in ISO (PMID:24413173) RGD PMID:24413173 NCBI chr 3:127,586,318...127,652,369
Ensembl chr 3:107,132,541...107,198,233
JBrowse link
G Sorl1 sortilin related receptor 1 involved_in ISO (PMID:22621900) RGD PMID:22621900 NCBI chr 8:51,238,713...51,401,458
Ensembl chr 8:42,341,704...42,504,513
JBrowse link
positive regulation of endosome to plasma membrane protein transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap5 A-kinase anchoring protein 5 involved_in ISO (PMID:25589740) RGD PMID:25589740 NCBI chr 6:100,787,169...100,796,712
Ensembl chr 6:95,051,537...95,061,578
JBrowse link
G Commd1 copper metabolism domain containing 1 acts_upstream_of_or_within ISO MGI:2176228|MGI:5315712 (PMID:26965651) RGD PMID:26965651 NCBI chr14:101,081,667...101,185,738
Ensembl chr14:96,880,463...96,984,501
JBrowse link
G Zdhhc2 zinc finger DHHC-type palmitoyltransferase 2 involved_in IMP PMID:25589740 UniProt PMID:25589740 RGD:21201275 NCBI chr16:58,511,931...58,581,530
Ensembl chr16:51,808,468...51,878,060
JBrowse link
positive regulation of retrograde transport, endosome to Golgi term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eipr1 EARP complex and GARP complex interacting protein 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:27440922)
UniProt
Ensembl
RGD
PMID:27440922 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:51,116,827...51,230,453
Ensembl chr 6:45,388,376...45,502,083
JBrowse link
protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptpn23 protein tyrosine phosphatase, non-receptor type 23 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:110,360,804...110,383,271
Ensembl chr 8:110,360,804...110,383,271
JBrowse link
G Snf8 SNF8 subunit of ESCRT-II involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:80,984,337...80,996,724
Ensembl chr10:80,984,363...80,996,734
JBrowse link
G Stam signal transducing adaptor molecule involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:77,120,235...77,166,173
Ensembl chr17:77,120,158...77,166,467
JBrowse link
G Vps25 vacuolar protein sorting 25 homolog involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:86,696,330...86,701,871
Ensembl chr10:86,188,812...86,231,829
JBrowse link
G Vps28 VPS28 subunit of ESCRT-I involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:110,222,638...110,226,486
Ensembl chr 7:108,341,989...108,345,837
JBrowse link
G Vps36 vacuolar protein sorting 36 homolog involved_in IEA
IBA
GO_REF:0000104
GO_REF:0000033
UniProt
GO_Central
GO_REF:0000033 GO_REF:0000104 NCBI chr16:69,810,404...69,834,789
Ensembl chr16:69,808,193...69,834,810
JBrowse link
recycling endosome to Golgi transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gcc2 GRIP and coiled-coil domain containing 2 involved_in ISO
ISS
(PMID:17488291)
GO_REF:0000024
RGD
UniProt
PMID:17488291 GO_REF:0000024 NCBI chr20:26,788,472...26,836,728
Ensembl chr20:26,247,404...26,293,613
JBrowse link
G Tbc1d14 TBC1 domain family, member 14 involved_in ISO
IEA
(PMID:17562788)
GO_REF:0000107
RGD
Ensembl
PMID:17562788 GO_REF:0000107 NCBI chr14:74,172,652...74,272,182
Ensembl chr14:74,172,664...74,272,183
JBrowse link
regulation of early endosome to late endosome transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chmp3 charged multivesicular body protein 3 involved_in ISO (PMID:16554368) RGD PMID:16554368 NCBI chr 4:105,134,860...105,180,862
Ensembl chr 4:103,576,515...103,623,959
JBrowse link
G Dennd10 DENN domain containing 10 involved_in ISO
IBA
(PMID:30771381)
GO_REF:0000033
RGD
GO_Central
PMID:30771381 GO_REF:0000033 NCBI chr 1:259,950,955...259,974,459
Ensembl chr 1:259,950,866...259,974,455
JBrowse link
G Dnajc13 DnaJ heat shock protein family (Hsp40) member C13 involved_in ISO (PMID:18256511) RGD PMID:18256511 NCBI chr 8:113,646,573...113,756,104
Ensembl chr 8:104,767,788...104,877,317
JBrowse link
G ENSRNOG00000067941 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 Ensembl chr11:42,352,734...42,354,134 JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 involved_in TAS
IEA
PMID:19565474
GO_REF:0000117
UniProt PMID:19565474 GO_REF:0000117, RGD:8553538 NCBI chr 8:73,578,747...73,650,184
Ensembl chr 8:64,683,449...64,755,147
JBrowse link
G Map2k2 mitogen activated protein kinase kinase 2 involved_in TAS
IEA
PMID:19565474
GO_REF:0000117
UniProt PMID:19565474 GO_REF:0000117, RGD:8553538 NCBI chr 7:9,241,449...9,264,216
Ensembl chr 7:8,580,905...8,610,243
JBrowse link
G Mapk1 mitogen activated protein kinase 1 involved_in TAS
IEA
PMID:19565474
GO_REF:0000117
UniProt PMID:19565474 GO_REF:0000117, RGD:8553538 NCBI chr11:97,462,025...97,529,193
Ensembl chr11:83,957,813...84,023,616
JBrowse link
G Mapk3 mitogen activated protein kinase 3 involved_in TAS
IEA
PMID:19565474
GO_REF:0000117
UniProt PMID:19565474 GO_REF:0000117, RGD:8553538 NCBI chr 1:190,797,189...190,803,411
Ensembl chr 1:181,366,637...181,372,863
JBrowse link
G Sh3glb1 SH3 domain -containing GRB2-like endophilin B1 IMP RGD PMID:18768694 RGD:13504749 NCBI chr 2:233,750,838...233,784,817
Ensembl chr 2:233,750,838...233,784,784
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase involved_in ISO (PMID:21724833) RGD PMID:21724833 NCBI chr 3:166,511,616...166,559,463
Ensembl chr 3:146,091,841...146,139,476
JBrowse link
regulation of early endosome to recycling endosome transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnajc13 DnaJ heat shock protein family (Hsp40) member C13 involved_in ISO (PMID:18256511) RGD PMID:18256511 NCBI chr 8:113,646,573...113,756,104
Ensembl chr 8:104,767,788...104,877,317
JBrowse link
G Rab11a RAB11a, member RAS oncogene family involved_in ISO
ISS
(PMID:20026645)
GO_REF:0000024
RGD
UniProt
PMID:20026645 GO_REF:0000024 NCBI chr 8:65,223,698...65,246,461
Ensembl chr 8:65,222,949...65,246,525
JBrowse link
G Rab11fip3 RAB11 family interacting protein 3 involved_in ISO (PMID:20026645) RGD PMID:20026645 NCBI chr10:15,507,151...15,591,173
Ensembl chr10:15,002,926...15,118,479
JBrowse link
regulation of endocytic recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp9a ATPase phospholipid transporting 9A (putative) involved_in ISO (PMID:27733620) RGD PMID:27733620 NCBI chr 3:157,360,354...157,467,628
Ensembl chr 3:157,360,359...157,467,818
JBrowse link
G Inpp5f inositol polyphosphate-5-phosphatase F involved_in ISO
IBA
(PMID:25869669)
GO_REF:0000033
RGD
GO_Central
PMID:25869669 GO_REF:0000033 NCBI chr 1:192,620,891...192,700,681
Ensembl chr 1:183,190,480...183,270,276
JBrowse link
G Ndrg4 NDRG family member 4 involved_in IEA
ISO
GO_REF:0000107
(PMID:24048452)
Ensembl
RGD
PMID:24048452 GO_REF:0000107 NCBI chr19:9,357,470...9,393,465
Ensembl chr19:9,351,404...9,386,914
JBrowse link
G Pla2g3 phospholipase A2, group III involved_in ISO (PMID:20393563) RGD PMID:20393563 NCBI chr14:78,367,625...78,373,913
Ensembl chr14:78,368,105...78,373,913
JBrowse link
G Popdc1 popeye domain cAMP effector 1 involved_in ISO (PMID:24048452) RGD PMID:24048452 NCBI chr20:50,401,611...50,442,653
Ensembl chr20:48,822,308...48,857,472
JBrowse link
G Rab11a RAB11a, member RAS oncogene family involved_in ISO
ISS
(PMID:20026645)
GO_REF:0000024
RGD
UniProt
PMID:20026645 GO_REF:0000024 NCBI chr 8:65,223,698...65,246,461
Ensembl chr 8:65,222,949...65,246,525
JBrowse link
G Rab11b RAB11B, member RAS oncogene family involved_in ISS
ISO
GO_REF:0000024
(PMID:10942597)
UniProt
RGD
PMID:10942597 GO_REF:0000024 NCBI chr 7:15,223,613...15,236,754
Ensembl chr 7:14,521,368...14,534,593
JBrowse link
G Rab11fip3 RAB11 family interacting protein 3 involved_in ISO (PMID:20026645) RGD PMID:20026645 NCBI chr10:15,507,151...15,591,173
Ensembl chr10:15,002,926...15,118,479
JBrowse link
regulation of neurotransmitter receptor transport, endosome to postsynaptic membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgap44 Rho GTPase activating protein 44 involved_in ISO (PMID:23739967) RGD PMID:23739967 NCBI chr10:50,154,724...50,322,027
Ensembl chr10:49,655,584...49,824,297
JBrowse link
G Gripap1 GRIP1 associated protein 1 involved_in IDA
IBA
ISO
IMP
PMID:20098723
GO_REF:0000033
(PMID:28285821)
GO_Central
RGD
PMID:28285821 PMID:20098723 PMID:20098723 GO_REF:0000033, RGD:12050105, RGD:12050105 NCBI chr  X:17,350,817...17,380,626
Ensembl chr  X:14,678,898...14,708,679
JBrowse link
regulation of recycling endosome localization within postsynapse term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gripap1 GRIP1 associated protein 1 involved_in IMP
IBA
IDA
PMID:20098723
GO_REF:0000033
GO_Central PMID:20098723 PMID:20098723 GO_REF:0000033, RGD:12050105, RGD:12050105 NCBI chr  X:17,350,817...17,380,626
Ensembl chr  X:14,678,898...14,708,679
JBrowse link
regulation of retrograde transport, endosome to Golgi term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp9a ATPase phospholipid transporting 9A (putative) involved_in ISO (PMID:30213940) RGD PMID:30213940 NCBI chr 3:157,360,354...157,467,628
Ensembl chr 3:157,360,359...157,467,818
JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in ISO UniProtKB:Q7KVL7 (PMID:23395371) RGD PMID:23395371 NCBI chr 7:124,706,246...124,867,234
Ensembl chr 7:122,826,696...122,987,703
JBrowse link
G Rab29 RAB29, member RAS oncogene family involved_in IMP PMID:23395371 ParkinsonsUK-UCL PMID:23395371 RGD:8553873 NCBI chr13:45,859,930...45,865,468
Ensembl chr13:43,307,775...43,313,417
JBrowse link
G Usp7 ubiquitin specific peptidase 7 involved_in ISO
IEA
(PMID:26365382)
GO_REF:0000107
RGD
Ensembl
PMID:26365382 GO_REF:0000107 NCBI chr10:7,335,508...7,432,018
Ensembl chr10:6,828,795...6,925,355
JBrowse link
retrograde transport, endosome to Golgi term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankfy1 ankyrin repeat and FYVE domain containing 1 involved_in ISO
IBA
(PMID:22284051)
GO_REF:0000033
RGD
GO_Central
PMID:22284051 GO_REF:0000033 NCBI chr10:57,312,246...57,383,964
Ensembl chr10:57,312,246...57,383,964
JBrowse link
G Ap1s1 adaptor related protein complex 1 subunit sigma 1 acts_upstream_of_or_within ISO (PMID:24928897) RGD PMID:24928897 NCBI chr12:25,261,958...25,272,483
Ensembl chr12:19,625,332...19,756,713
JBrowse link
G Arfrp1 ARF related protein 1 involved_in ISO
IEA
(PMID:16129887)
GO_REF:0000107
RGD
Ensembl
PMID:16129887 GO_REF:0000107 NCBI chr 3:168,466,351...168,473,960
Ensembl chr 3:168,466,496...168,473,914
JBrowse link
G Arl1 ARF like GTPase 1 involved_in ISO
IEA
ISS
(PMID:19224922)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:19224922 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:23,120,004...23,131,173
Ensembl chr 7:23,119,589...23,131,898
JBrowse link
G Baiap3 BAI1-associated protein 3 involved_in ISO (PMID:28626000) RGD PMID:28626000 NCBI chr10:14,764,768...14,777,516
Ensembl chr10:14,260,269...14,273,019
JBrowse link
G Bet1l Bet1 golgi vesicular membrane trafficking protein-like involved_in ISO
IBA
IEA
(PMID:15215310)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:15215310 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:205,361,041...205,365,036
Ensembl chr 1:195,931,411...195,935,040
JBrowse link
G Cln5 CLN5, intracellular trafficking protein involved_in ISO (PMID:22431521) RGD PMID:22431521 NCBI chr15:86,308,286...86,321,679
Ensembl chr15:79,893,548...79,903,438
Ensembl chr 2:79,893,548...79,903,438
JBrowse link
G Cltc clathrin heavy chain involved_in ISO
IEA
(PMID:20065094)
GO_REF:0000107
RGD
Ensembl
PMID:20065094 GO_REF:0000107 NCBI chr10:72,014,984...72,073,308
Ensembl chr10:71,517,663...71,573,737
JBrowse link
G Dctn1 dynactin subunit 1 involved_in ISO
IEA
(PMID:19619496)
GO_REF:0000107
RGD
Ensembl
PMID:19619496 GO_REF:0000107 NCBI chr 4:115,671,024...115,703,824
Ensembl chr 4:115,661,638...115,703,815
JBrowse link
G Dennd2a DENN domain containing 2A involved_in ISO
IBA
(PMID:20937701)
GO_REF:0000033
RGD
GO_Central
PMID:20937701 GO_REF:0000033 NCBI chr 4:68,233,016...68,332,235
Ensembl chr 4:68,233,958...68,332,105
JBrowse link
G Dennd5a DENN domain containing 5A involved_in ISO
IBA
(PMID:19619496)
GO_REF:0000033
RGD
GO_Central
PMID:19619496 GO_REF:0000033 NCBI chr 1:163,928,183...163,994,207
Ensembl chr 1:163,928,183...163,994,316
JBrowse link
G Erc1 ELKS/RAB6-interacting/CAST family member 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(PMID:11929610)
ParkinsonsUK-UCL
RGD
PMID:11929610 GO_REF:0000024 NCBI chr 4:152,763,664...153,055,724
Ensembl chr 4:152,767,419...153,055,639
JBrowse link
G Evi5 ecotropic viral integration site 5 involved_in ISO
IBA
(PMID:17562788)
GO_REF:0000033
RGD
GO_Central
PMID:17562788 GO_REF:0000033 NCBI chr14:1,875,601...2,021,678
Ensembl chr14:1,875,647...2,021,678
JBrowse link
G Gbf1 golgi brefeldin A resistant guanine nucleotide exchange factor 1 involved_in ISO (PMID:12808027) RGD PMID:12808027 NCBI chr 1:254,959,784...255,088,479
Ensembl chr 1:245,018,568...245,147,042
JBrowse link
G Gcc2 GRIP and coiled-coil domain containing 2 involved_in ISO (PMID:17488291) RGD PMID:17488291 NCBI chr20:26,788,472...26,836,728
Ensembl chr20:26,247,404...26,293,613
JBrowse link
G Gga1 golgi associated, gamma adaptin ear containing, ARF binding protein 1 involved_in ISO (PMID:15886016) RGD PMID:15886016 NCBI chr 7:110,436,071...110,451,790
Ensembl chr 7:110,435,062...110,451,789
JBrowse link
G Golt1a golgi transport 1A involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr13:44,760,356...44,773,123
Ensembl chr13:44,760,380...44,773,122
JBrowse link
G Golt1b golgi transport 1B involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:175,333,056...175,346,156
Ensembl chr 4:175,333,092...175,346,153
JBrowse link
G Gosr1 golgi SNAP receptor complex member 1 involved_in ISO (PMID:15215310) RGD PMID:15215310 NCBI chr10:61,570,499...61,607,287
Ensembl chr10:61,450,494...61,607,177
Ensembl chr10:61,450,494...61,607,177
JBrowse link
G Heatr5a HEAT repeat containing 5A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:69,321,869...69,419,861
Ensembl chr 6:69,321,869...69,419,773
JBrowse link
G Heatr5b HEAT repeat containing 5B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:16,243,424...16,323,444
Ensembl chr 6:16,243,461...16,323,435
JBrowse link
G Magel2 MAGE family member L2 involved_in ISO (PMID:23452853) RGD PMID:23452853 NCBI chr 1:115,880,142...115,884,684
Ensembl chr 1:115,880,474...115,884,250
JBrowse link
G Pheta1 PH domain containing endocytic trafficking adaptor 1 involved_in ISO
IBA
(PMID:21233288)
GO_REF:0000033
RGD
GO_Central
PMID:21233288 GO_REF:0000033 NCBI chr12:34,711,831...34,717,601
Ensembl chr12:34,711,810...34,717,081
JBrowse link
G Pheta2 PH domain containing endocytic trafficking adaptor 2 involved_in ISO
IBA
(PMID:21233288)
GO_REF:0000033
RGD
GO_Central
PMID:21233288 GO_REF:0000033 NCBI chr 7:115,735,499...115,741,988
Ensembl chr 7:113,857,249...113,861,871
JBrowse link
G Pikfyve phosphoinositide kinase, FYVE-type zinc finger containing involved_in ISO (PMID:14551253), (PMID:16954148) RGD PMID:14551253 PMID:16954148 NCBI chr 9:66,563,747...66,657,873
Ensembl chr 9:66,563,727...66,657,868
JBrowse link
G Plekha3 pleckstrin homology domain containing A3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:61,623,434...61,644,649
Ensembl chr 3:61,623,434...61,645,166
JBrowse link
G Prepl prolyl endopeptidase-like involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:23321636)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:23321636 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:15,333,107...15,362,825
Ensembl chr 6:9,580,217...9,607,772
JBrowse link
G Rab29 RAB29, member RAS oncogene family involved_in ISS
ISO
GO_REF:0000024
(PMID:24788816)
UniProt
RGD
PMID:24788816 GO_REF:0000024 NCBI chr13:45,859,930...45,865,468
Ensembl chr13:43,307,775...43,313,417
JBrowse link
G Rab6a RAB6A, member RAS oncogene family involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:154,957,870...155,008,922
Ensembl chr 1:154,958,189...154,996,715
JBrowse link
G Rab6b RAB6B, member RAS oncogene family involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:103,695,328...103,764,023
Ensembl chr 8:103,695,631...103,805,732
JBrowse link
G Rab7a RAB7A, member RAS oncogene family involved_in ISO (PMID:19531583) RGD PMID:19531583 NCBI chr 4:122,019,281...122,068,067
Ensembl chr 4:120,461,963...120,506,889
JBrowse link
G Rab9a RAB9A, member RAS oncogene family involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:27,955,552...28,009,870
Ensembl chr  X:27,952,204...28,001,622
JBrowse link
G Rab9b RAB9B, member RAS oncogene family involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:100,220,897...100,231,591
Ensembl chr  X:100,220,894...100,231,701
JBrowse link
G Rcsd1 RCSD domain containing 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:77,901,898...77,964,309
Ensembl chr13:77,901,898...77,966,228
JBrowse link
G Rgp1 RGP1 homolog, RAB6A GEF complex partner 1 involved_in ISO
IBA
(PMID:23091056)
GO_REF:0000033
RGD
GO_Central
PMID:23091056 GO_REF:0000033 NCBI chr 5:57,834,467...57,843,087
Ensembl chr 5:57,834,629...57,843,086
JBrowse link
G Rhobtb3 Rho-related BTB domain containing 3 involved_in ISO (PMID:19490898) RGD PMID:19490898 NCBI chr 2:7,094,972...7,201,507
Ensembl chr 2:5,363,388...5,419,041
JBrowse link
G Ric1 RIC1 homolog, RAB6A GEF complex partner 1 involved_in ISO
IBA
(PMID:23091056)
GO_REF:0000033
RGD
GO_Central
PMID:23091056 GO_REF:0000033 NCBI chr 1:227,285,510...227,384,553
Ensembl chr 1:227,285,210...227,382,863
JBrowse link
G Rnf126 ring finger protein 126 involved_in ISO (PMID:24275455) RGD PMID:24275455 NCBI chr 7:10,590,013...10,597,585
Ensembl chr 7:9,938,229...9,946,738
JBrowse link
G Slc66a2 solute carrier family 66 member 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:75,976,000...76,014,651
Ensembl chr18:73,702,564...73,739,676
JBrowse link
G Snx1 sorting nexin 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:18088323)
UniProt
RGD
PMID:18088323 GO_REF:0000024 NCBI chr 8:75,515,780...75,565,487
Ensembl chr 8:66,630,086...66,670,360
JBrowse link
G Snx2 sorting nexin 2 involved_in ISO (PMID:20138391) RGD PMID:20138391 NCBI chr18:48,800,594...48,842,158
Ensembl chr18:46,602,284...46,643,865
JBrowse link
G Snx32 sorting nexin 32 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:212,231,716...212,248,127
Ensembl chr 1:202,802,394...202,818,743
JBrowse link
G Snx5 sorting nexin 5 involved_in ISO
IBA
(PMID:17148574)
GO_REF:0000033
RGD
GO_Central
PMID:17148574 GO_REF:0000033 NCBI chr 3:152,075,258...152,094,508
Ensembl chr 3:131,621,880...131,641,192
JBrowse link
G Snx6 sorting nexin 6 involved_in ISO
IBA
(PMID:19935774)
GO_REF:0000033
RGD
GO_Central
PMID:19935774 GO_REF:0000033 NCBI chr 6:77,966,141...78,009,343
Ensembl chr 6:72,229,870...72,315,911
JBrowse link
G Sorl1 sortilin related receptor 1 involved_in ISO (PMID:16174740) RGD PMID:16174740 NCBI chr 8:51,238,713...51,401,458
Ensembl chr 8:42,341,704...42,504,513
JBrowse link
G Spag9 sperm associated antigen 9 acts_upstream_of_or_within ISO (PMID:19056739) RGD PMID:19056739 NCBI chr10:79,440,311...79,574,709
Ensembl chr10:78,943,479...79,077,797
JBrowse link
G Stx16 syntaxin 16 involved_in ISO (PMID:15215310), (PMID:17389686), (PMID:18195106) RGD PMID:15215310 PMID:17389686 PMID:18195106 NCBI chr 3:183,271,417...183,300,746
Ensembl chr 3:162,853,782...162,882,489
JBrowse link
G Stx5 syntaxin 5 involved_in ISO (PMID:15215310) RGD PMID:15215310 NCBI chr 1:215,066,532...215,082,685
Ensembl chr 1:205,637,413...205,653,563
JBrowse link
G Stx6 syntaxin 6 involved_in ISO
IBA
IDA
(PMID:19224922)
GO_REF:0000033
PMID:30962439
RGD
GO_Central
PMID:19224922 PMID:30962439 GO_REF:0000033, RGD:152995575 NCBI chr13:69,882,647...69,928,895
Ensembl chr13:67,332,314...67,378,576
JBrowse link
G Tbc1d10a TBC1 domain family, member 10a involved_in ISO
IBA
(PMID:17562788)
GO_REF:0000033
RGD
GO_Central
PMID:17562788 GO_REF:0000033 NCBI chr14:79,051,822...79,083,603
Ensembl chr14:79,055,432...79,083,600
JBrowse link
G Tbc1d10b TBC1 domain family, member 10b involved_in ISO
IBA
(PMID:17562788)
GO_REF:0000033
RGD
GO_Central
PMID:17562788 GO_REF:0000033 NCBI chr 1:181,814,972...181,826,628
Ensembl chr 1:181,814,972...181,826,628
JBrowse link
G Tbc1d10c TBC1 domain family, member 10C involved_in ISO (PMID:17562788) RGD PMID:17562788 NCBI chr 1:210,906,621...210,913,649
Ensembl chr 1:201,477,157...201,564,920
JBrowse link
G Tbc1d17 TBC1 domain family, member 17 involved_in ISO (PMID:17562788) RGD PMID:17562788 NCBI chr 1:95,324,770...95,333,156
Ensembl chr 1:95,322,737...95,333,005
JBrowse link
G Tbc1d23 TBC1 domain family, member 23 involved_in ISO
IBA
(PMID:29084197)
GO_REF:0000033
RGD
GO_Central
PMID:29084197 GO_REF:0000033 NCBI chr11:56,772,476...56,830,625
Ensembl chr11:43,303,355...43,361,503
JBrowse link
G Tbc1d5 TBC1 domain family, member 5 involved_in ISO
IBA
(PMID:22354992)
GO_REF:0000033
RGD
GO_Central
PMID:22354992 GO_REF:0000033 NCBI chr 9:3,740,032...4,256,971
Ensembl chr 9:3,513,623...4,016,913
JBrowse link
G Tmem87a transmembrane protein 87A involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
UniProtKB:Q9P1Q0 (PMID:26157166)
GO_Central
RGD
PMID:26157166 GO_REF:0000033 NCBI chr 3:127,761,490...127,807,314
Ensembl chr 3:107,307,726...107,353,551
JBrowse link
G Tmem87b transmembrane protein 87B involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
UniProtKB:Q9P1Q0 (PMID:26157166)
GO_Central
RGD
PMID:26157166 GO_REF:0000033 NCBI chr 3:116,061,933...116,097,421
Ensembl chr 3:116,062,204...116,097,367
JBrowse link
G Trim27 tripartite motif-containing 27 involved_in ISO (PMID:23452853) RGD PMID:23452853 NCBI chr17:48,233,999...48,246,348
Ensembl chr17:43,538,285...43,550,643
JBrowse link
G Ube2o ubiquitin-conjugating enzyme E2O involved_in ISO
IBA
(PMID:23452853)
GO_REF:0000033
RGD
GO_Central
PMID:23452853 GO_REF:0000033 NCBI chr10:101,765,572...101,812,736
Ensembl chr10:101,766,005...101,812,899
JBrowse link
G Vamp3 vesicle-associated membrane protein 3 involved_in ISO
IEA
ISS
(PMID:18195106)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:18195106 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:166,780,927...166,791,522
Ensembl chr 5:161,498,109...161,508,751
JBrowse link
G Vps26a VPS26 retromer complex component A involved_in
acts_upstream_of_or_within
ISS
ISO
IBA
IEA
GO_REF:0000024
(PMID:15078902)
GO_REF:0000033
GO_REF:0000107
(PMID:15078903)
UniProt
RGD
GO_Central
Ensembl
PMID:15078902 PMID:15078903 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr20:30,404,320...30,434,266
Ensembl chr20:30,404,325...30,434,131
JBrowse link
G Vps26b VPS26 retromer complex component B involved_in IBA
ISO
GO_REF:0000033
(PMID:21920005)
GO_Central
RGD
PMID:21920005 GO_REF:0000033 NCBI chr 8:33,675,025...33,696,132
Ensembl chr 8:25,415,261...25,436,985
JBrowse link
G Vps29 VPS29 retromer complex component involved_in IEA
IBA
GO_REF:0000002
GO_REF:0000033
InterPro
GO_Central
GO_REF:0000002 GO_REF:0000033 NCBI chr12:39,869,688...39,878,732
Ensembl chr12:34,207,263...34,217,964
JBrowse link
G Vps35 VPS35 retromer complex component involved_in ISO
IBA
IMP
(PMID:15078903), (PMID:26618722), (PMID:27385586)
GO_REF:0000033
PMID:23395371
RGD
GO_Central
PMID:15078903 PMID:26618722 PMID:27385586 PMID:23395371 GO_REF:0000033, RGD:8553873 NCBI chr19:37,938,989...37,974,887
Ensembl chr19:21,765,749...21,801,618
JBrowse link
G Vps50 VPS50 subunit of EARP/GARPII complex NOT|involved_in ISO
IEA
ISS
(PMID:25799061)
GO_REF:0000002
GO_REF:0000024
RGD
InterPro
UniProt
PMID:25799061 GO_REF:0000002 GO_REF:0000024 NCBI chr 4:32,439,101...32,540,299
Ensembl chr 4:31,484,463...31,585,617
JBrowse link
G Vps51 VPS51 subunit of GARP complex involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:20685960)
GO_REF:0000033
(PMID:25799061)
RGD
GO_Central
PMID:20685960 PMID:25799061 GO_REF:0000033 NCBI chr 1:212,789,721...212,799,708
Ensembl chr 1:203,360,440...203,370,430
JBrowse link
G Vps52 VPS52 subunit of GARP complex involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:4,922,599...4,933,458
Ensembl chr20:4,860,843...4,931,665
JBrowse link
G Vps53 VPS53 subunit of GARP complex involved_in ISO
IBA
(PMID:25799061)
GO_REF:0000033
RGD
GO_Central
PMID:25799061 GO_REF:0000033 NCBI chr10:61,418,076...61,536,912
Ensembl chr10:60,919,820...61,038,676
JBrowse link
G Vps54 VPS54 subunit of GARP complex acts_upstream_of_or_within
involved_in
ISO
IBA
IEA
(PMID:25799061)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:25799061 GO_REF:0000033 GO_REF:0000107 NCBI chr14:99,580,120...99,657,178
Ensembl chr14:95,378,012...95,455,857
JBrowse link
G Vti1a vesicle transport through interaction with t-SNAREs 1A involved_in ISO
IBA
ISS
(PMID:15215310), (PMID:18195106), (PMID:19224922)
GO_REF:0000033
GO_REF:0000024
RGD
GO_Central
UniProt
PMID:15215310 PMID:18195106 PMID:19224922 GO_REF:0000024 GO_REF:0000033 NCBI chr 1:264,361,538...264,667,171
Ensembl chr 1:254,356,429...254,661,852
JBrowse link
G Vti1b vesicle transport through interaction with t-SNAREs 1B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:97,957,700...97,976,491
Ensembl chr 6:97,961,346...97,976,465
JBrowse link
G Washc1 WASH complex subunit 1 involved_in ISO
IBA
ISS
(PMID:19922874), (PMID:23452853)
GO_REF:0000033
GO_REF:0000024
RGD
GO_Central
UniProt
PMID:19922874 PMID:23452853 GO_REF:0000024 GO_REF:0000033 NCBI chr 9:113,169,730...113,179,829
Ensembl chr 9:105,722,899...105,733,009
JBrowse link
G Washc1-ps2 WASH complex subunit 1, pseudogene 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:106,097,337...106,103,219
Ensembl chr 9:106,097,498...106,100,342
Ensembl chr 9:106,097,498...106,100,342
JBrowse link
G Washc2c WASH complex subunit 2C involved_in ISO
IBA
ISS
(PMID:19922874)
GO_REF:0000033
GO_REF:0000024
RGD
GO_Central
UniProt
PMID:19922874 GO_REF:0000024 GO_REF:0000033 NCBI chr 4:150,912,863...150,998,301
Ensembl chr 4:149,267,924...149,325,851
JBrowse link
G Wipf3 WAS/WASL interacting protein family, member 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:83,550,075...83,629,929
Ensembl chr 4:83,550,468...83,629,386
JBrowse link
G Ykt6 YKT6 v-SNARE homolog involved_in ISO (PMID:15215310) RGD PMID:15215310 NCBI chr14:85,041,393...85,057,347
Ensembl chr14:80,832,187...80,843,385
JBrowse link
slow endocytic recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Micall1 MICAL-like 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:19864458)
UniProt
Ensembl
RGD
PMID:19864458 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:112,557,192...112,587,618
Ensembl chr 7:110,676,775...110,707,177
JBrowse link
G Vps13b vacuolar protein sorting 13 homolog B involved_in ISO (PMID:30962439) RGD PMID:30962439 NCBI chr 7:68,436,996...69,013,574
Ensembl chr 7:66,558,471...67,128,429
JBrowse link
synaptic vesicle budding from endosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap1g1 adaptor related protein complex 1 subunit gamma 1 involved_in IDA
IMP
PMID:22539861 SynGO PMID:22539861 PMID:22539861 RGD:12050120, RGD:12050120 NCBI chr19:54,654,101...54,740,586
Ensembl chr19:37,744,633...37,829,167
JBrowse link
G Ap1s2 adaptor related protein complex 1 subunit sigma 2 involved_in ISO (PMID:20203623) RGD PMID:20203623 NCBI chr  X:30,572,746...30,598,961
Ensembl chr  X:30,572,751...30,597,262
JBrowse link
G Ap3d1 adaptor related protein complex 3 subunit delta 1 involved_in IDA
ISO
IBA
IMP
PMID:22539861
(PMID:11588176)
GO_REF:0000033
RGD
GO_Central
PMID:11588176 PMID:22539861 PMID:22539861 GO_REF:0000033, RGD:12050120, RGD:12050120 NCBI chr 7:9,620,909...9,656,350
Ensembl chr 7:8,970,291...9,005,643
JBrowse link
G Btbd8 BTB domain containing 8 involved_in ISO (PMID:29262337) RGD PMID:29262337 NCBI chr14:2,265,187...2,338,426
Ensembl chr14:2,266,454...2,334,393
JBrowse link
synaptic vesicle endosomal processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctsd cathepsin D involved_in IDA
IMP
PMID:31340140 SynGO PMID:31340140 PMID:31340140 RGD:155230699, RGD:155230699 NCBI chr 1:206,956,945...206,968,821
Ensembl chr 1:197,527,467...197,539,488
JBrowse link
G Rab11a RAB11a, member RAS oncogene family involved_in IMP
EXP
IDA
PMID:30301801 SynGO PMID:30301801 PMID:30301801 PMID:30301801 RGD:405650222, RGD:405650222, RGD:405650222 NCBI chr 8:65,223,698...65,246,461
Ensembl chr 8:65,222,949...65,246,525
JBrowse link
synaptic vesicle recycling via endosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2l1 Bcl2-like 1 involved_in IMP PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 3:161,713,777...161,764,844
Ensembl chr 3:141,253,523...141,303,479
Ensembl chr 1:141,253,523...141,303,479
JBrowse link
G Dnm1l dynamin 1-like involved_in IMP PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr11:98,084,049...98,135,663
Ensembl chr11:84,581,216...84,631,482
JBrowse link
G Myo5b myosin Vb involved_in IMP
IDA
PMID:18984164 SynGO PMID:18984164 PMID:18984164 RGD:11533643, RGD:11533643 NCBI chr18:68,038,759...68,341,568
Ensembl chr18:68,038,759...68,338,745
JBrowse link
G Rab7a RAB7A, member RAS oncogene family involved_in IDA
EXP
PMID:29950309 SynGO PMID:29950309 PMID:29950309 RGD:405650288, RGD:405650288 NCBI chr 4:122,019,281...122,068,067
Ensembl chr 4:120,461,963...120,506,889
JBrowse link
synaptic vesicle to endosome fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stx12 syntaxin 12 involved_in IDA
IMP
PMID:17004320 SynGO PMID:17004320 PMID:17004320 RGD:12050136, RGD:12050136 NCBI chr 5:150,347,554...150,376,426
Ensembl chr 5:145,063,587...145,092,377
JBrowse link
G Stx6 syntaxin 6 involved_in IDA
IMP
PMID:17004320 SynGO PMID:17004320 PMID:17004320 RGD:12050136, RGD:12050136 NCBI chr13:69,882,647...69,928,895
Ensembl chr13:67,332,314...67,378,576
JBrowse link
G Stx7 syntaxin 7 involved_in ISO (PMID:34408265) RGD PMID:34408265 NCBI chr 1:23,016,330...23,056,579
Ensembl chr 1:21,197,075...21,237,279
JBrowse link
G Vamp4 vesicle-associated membrane protein 4 involved_in IDA
IEP
IMP
PMID:17004320
PMID:26607000
SynGO PMID:17004320 PMID:26607000 PMID:17004320 PMID:26607000 PMID:26607000 RGD:12050136, RGD:11058152, RGD:12050136, RGD:11058152, RGD:11058152 NCBI chr13:77,453,135...77,475,909
Ensembl chr13:74,919,880...74,933,686
JBrowse link
G Vti1a vesicle transport through interaction with t-SNAREs 1A involved_in IMP
IDA
PMID:17004320 SynGO PMID:17004320 PMID:17004320 RGD:12050136, RGD:12050136 NCBI chr 1:264,361,538...264,667,171
Ensembl chr 1:254,356,429...254,661,852
JBrowse link
trans-Golgi network to recycling endosome transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rab13 RAB13, member RAS oncogene family involved_in ISO
ISS
(PMID:18779367)
GO_REF:0000024
RGD
UniProt
PMID:18779367 GO_REF:0000024 NCBI chr 2:177,972,535...177,977,679
Ensembl chr 2:175,675,005...175,680,036
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20536
    cellular process 19525
      vesicle-mediated transport 1646
        endosomal transport 288
          endocytic recycling + 96
          endosome transport via multivesicular body sorting pathway + 28
          retrograde transport, endosome to Golgi + 100
          synaptic vesicle endosomal processing + 18
          trans-Golgi network to recycling endosome transport 1
          vesicle-mediated transport between endosomal compartments + 51
Path 2
Term Annotations click to browse term
  biological_process 20536
    localization 5703
      establishment of localization 5046
        establishment of localization in cell 2139
          intracellular transport 1392
            endosomal transport 288
              endocytic recycling + 96
              endosome transport via multivesicular body sorting pathway + 28
              retrograde transport, endosome to Golgi + 100
              synaptic vesicle endosomal processing + 18
              trans-Golgi network to recycling endosome transport 1
              vesicle-mediated transport between endosomal compartments + 51
paths to the root