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ONTOLOGY REPORT - ANNOTATIONS

Term:sterol metabolic process
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Accession:GO:0016125 term browser browse the term
Definition:The chemical reactions and pathways involving sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule.
Synonyms:exact_synonym: sterol metabolism

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sterol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhcr24 24-dehydrocholesterol reductase acts_upstream_of_or_within ISO (PMID:14684813) MGI PMID:14684813 NCBI chrNW_004624862:4,995,836...5,022,395
Ensembl chrNW_004624862:4,995,720...5,020,850 		JBrowse link
G Ebp EBP cholestenol delta-isomerase involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624893:340,843...346,560
Ensembl chrNW_004624893:341,129...347,717 		JBrowse link
G Ebpl EBP like involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624748:4,967,611...5,000,156
Ensembl chrNW_004624748:4,967,698...5,000,728 		JBrowse link
G Lipa lipase A, lysosomal acid type acts_upstream_of_or_within ISO (PMID:21289032), (PMID:21697390), (PMID:25147230) RGD
MGI		 PMID:10419291 PMID:21289032 PMID:21697390 PMID:25147230 RGD:1626385 NCBI chrNW_004624737:49,471...82,981
Ensembl chrNW_004624737:49,371...83,514 		JBrowse link
G LOC101699044 cytochrome P450 26A1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624737:4,324,964...4,329,488
Ensembl chrNW_004624737:4,325,755...4,329,758 		JBrowse link
G LOC101701685 cholesterol 7-alpha-monooxygenase involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624744:33,563,564...33,619,851
Ensembl chrNW_004624744:33,612,901...33,619,869 		JBrowse link
G LOC101708363 cytochrome P450 26C1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624737:4,312,711...4,323,833
Ensembl chrNW_004624737:4,312,772...4,320,978 		JBrowse link
G LOC101714280 cytochrome P450 26B1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624762:1,455,828...1,474,201
Ensembl chrNW_004624762:1,456,440...1,472,381 		JBrowse link
G LOC101717854 24-hydroxycholesterol 7-alpha-hydroxylase involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624754:13,980,180...14,033,591
Ensembl chrNW_004624754:13,980,354...14,034,098 		JBrowse link
G LOC101724157 lanosterol 14-alpha demethylase involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624809:1,080,427...1,110,802
Ensembl chrNW_004624809:1,080,656...1,100,254 		JBrowse link
G Lss lanosterol synthase ISO RGD PMID:16440058 RGD:1626611 NCBI chrNW_004624745:31,301,648...31,325,283
Ensembl chrNW_004624745:31,306,807...31,325,199 		JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21289032), (PMID:21697390) Ensembl
MGI		 PMID:21289032 PMID:21697390 GO_REF:0000107 NCBI chrNW_004624770:8,592,473...8,642,063
Ensembl chrNW_004624770:8,592,457...8,641,843 		JBrowse link
G Npc2 NPC intracellular cholesterol transporter 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21289032) Ensembl
MGI		 PMID:21289032 GO_REF:0000107 NCBI chrNW_004624734:27,166,867...27,177,229
Ensembl chrNW_004624734:27,166,880...27,177,229 		JBrowse link
G Sqle squalene epoxidase involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624735:30,225,307...30,246,202
Ensembl chrNW_004624735:30,226,465...30,246,294 		JBrowse link
cholesterol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa1 apolipoprotein A1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8647961) Ensembl
MGI		 PMID:8647961 GO_REF:0000107 NCBI chrNW_004624784:12,249,283...12,251,215
Ensembl chrNW_004624784:12,249,283...12,251,136 		JBrowse link
G Cftr CF transmembrane conductance regulator acts_upstream_of_or_within ISO (PMID:17085523) MGI PMID:17085523 NCBI chrNW_004624827:1,704,733...1,893,579 JBrowse link
G Dhcr24 24-dehydrocholesterol reductase acts_upstream_of_or_within
involved_in		 ISO (PMID:11519011)
(PMID:14684813)
(PMID:14684813), (PMID:16321981), (PMID:16513830)		 MGI
UniProt		 PMID:11519011 PMID:14684813 PMID:16321981 PMID:16513830 NCBI chrNW_004624862:4,995,836...5,022,395
Ensembl chrNW_004624862:4,995,720...5,020,850 		JBrowse link
G Dhcr7 7-dehydrocholesterol reductase involved_in ISO
IEA		 RGD
TreeGrafter
UniProt		 PMID:9831636 PMID:10329655 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 GO_REF:0000118 RGD:2316918 RGD:632010 NCBI chrNW_004624767:16,118,157...16,132,225
Ensembl chrNW_004624767:16,118,052...16,132,834 		JBrowse link
G Ebp EBP cholestenol delta-isomerase involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:11171067 GO_REF:0000118 RGD:628445 NCBI chrNW_004624893:340,843...346,560
Ensembl chrNW_004624893:341,129...347,717 		JBrowse link
G Fdft1 farnesyl-diphosphate farnesyltransferase 1 involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:16440058 GO_REF:0000118 RGD:1626611 NCBI chrNW_004624758:25,340,142...25,363,669
Ensembl chrNW_004624758:25,340,074...25,366,299 		JBrowse link
G G6pd glucose-6-phosphate dehydrogenase involved_in ISO (PMID:12027950) BHF-UCL PMID:12027950 NCBI chrNW_004624946:989,376...1,001,787
Ensembl chrNW_004624946:986,107...1,001,955 		JBrowse link
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15845870), (PMID:7798939), (PMID:8647961) UniProt
MGI		 PMID:7798939 PMID:8647961 PMID:15845870 GO_REF:0000043 NCBI chrNW_004624951:681,559...711,476
Ensembl chrNW_004624951:682,178...711,474 		JBrowse link
G Hmgcs1 3-hydroxy-3-methylglutaryl-CoA synthase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624759:11,826,793...11,847,111
Ensembl chrNW_004624759:11,826,876...11,847,111 		JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624772:15,432,612...15,464,343
Ensembl chrNW_004624772:15,432,198...15,467,797 		JBrowse link
G Hsd17b7 hydroxysteroid 17-beta dehydrogenase 7 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:12829805) MGI
TreeGrafter		 PMID:12829805 GO_REF:0000118 NCBI chrNW_004624826:1,260,133...1,287,565
Ensembl chrNW_004624826:1,260,223...1,283,741 		JBrowse link
G Idi1 isopentenyl-diphosphate delta isomerase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624775:9,806,482...9,879,265 JBrowse link
G Insig1 insulin induced gene 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:32322062)
(PMID:16955138)		 UniProt
MGI		 PMID:16955138 PMID:32322062 NCBI chrNW_004624800:2,533,010...2,543,754
Ensembl chrNW_004624800:2,534,967...2,543,075 		JBrowse link
G Insig2 insulin induced gene 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:16955138) MGI
TreeGrafter		 PMID:16955138 GO_REF:0000118 NCBI chrNW_004624732:27,089,776...27,110,170
Ensembl chrNW_004624732:27,087,674...27,104,181 		JBrowse link
G Lbr lamin B receptor involved_in IEA UniProt
TreeGrafter		 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004624835:6,469,677...6,489,790 JBrowse link
G Lipa lipase A, lysosomal acid type acts_upstream_of_or_within ISO (PMID:25147230), (PMID:29599133) MGI PMID:25147230 PMID:29599133 NCBI chrNW_004624737:49,471...82,981
Ensembl chrNW_004624737:49,371...83,514 		JBrowse link
G LOC101718541 NADH-cytochrome b5 reductase 3 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624752:6,182,156...6,198,395
Ensembl chrNW_004624752:6,182,129...6,198,400 		JBrowse link
G Lss lanosterol synthase involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:1429550 PMID:16440058 GO_REF:0000118 RGD:1626611 RGD:2316919 NCBI chrNW_004624745:31,301,648...31,325,283
Ensembl chrNW_004624745:31,306,807...31,325,199 		JBrowse link
G Mvd mevalonate diphosphate decarboxylase involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 NCBI chrNW_004624746:905,919...911,591
Ensembl chrNW_004624746:905,757...911,591 		JBrowse link
G Mvk mevalonate kinase involved_in IEA UniProt
TreeGrafter		 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004624747:10,837,743...10,858,758
Ensembl chrNW_004624747:10,834,306...10,857,595 		JBrowse link
G Npc1l1 NPC1 like intracellular cholesterol transporter 1 involved_in ISO (PMID:17140581) HGNC-UCL PMID:17140581 NCBI chrNW_004624740:7,590,041...7,609,574
Ensembl chrNW_004624740:7,590,046...7,609,420 		JBrowse link
G Pmvk phosphomevalonate kinase involved_in IEA UniProt
TreeGrafter
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624885:2,544,136...2,552,591
Ensembl chrNW_004624885:2,543,862...2,553,237 		JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624759:14,143,439...14,174,971
Ensembl chrNW_004624759:14,142,956...14,171,718 		JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624862:3,443,720...3,496,078
Ensembl chrNW_004624862:3,450,078...3,496,142 		JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 acts_upstream_of ISO (PMID:9329978) MGI PMID:9329978 NCBI chrNW_004624849:3,602,103...3,623,922
Ensembl chrNW_004624849:3,602,261...3,623,465 		JBrowse link
G Tm7sf2 transmembrane 7 superfamily member 2 involved_in IEA Ensembl
TreeGrafter
UniProt		 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624767:21,287,398...21,291,619
Ensembl chrNW_004624767:21,285,395...21,292,922 		JBrowse link
cholesterol biosynthetic process via 24,25-dihydrolanosterol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101724157 lanosterol 14-alpha demethylase ISO RGD PMID:7581240 RGD:2316902 NCBI chrNW_004624809:1,080,427...1,110,802
Ensembl chrNW_004624809:1,080,656...1,100,254 		JBrowse link
cholesterol biosynthetic process via desmosterol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhcr24 24-dehydrocholesterol reductase involved_in ISO (PMID:11519011) UniProt PMID:11519011 NCBI chrNW_004624862:4,995,836...5,022,395
Ensembl chrNW_004624862:4,995,720...5,020,850 		JBrowse link
cholesterol biosynthetic process via lathosterol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhcr7 7-dehydrocholesterol reductase involved_in ISO (PMID:38297129), (PMID:38297130) UniProt PMID:38297129 PMID:38297130 NCBI chrNW_004624767:16,118,157...16,132,225
Ensembl chrNW_004624767:16,118,052...16,132,834 		JBrowse link
G Sc5d sterol-C5-desaturase involved_in ISO (PMID:10786622)
PMID:4019441		 RGD
UniProt		 PMID:4019441 PMID:7961720 PMID:10786622 RGD:2316911 RGD:405866208 NCBI chrNW_004624880:3,874,337...3,896,721 JBrowse link
cholesterol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1d1 aldo-keto reductase family 1 member D1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624765:18,406,859...18,474,905
Ensembl chrNW_004624765:18,406,758...18,475,918 		JBrowse link
G Apoe apolipoprotein E acts_upstream_of_or_within ISO (PMID:9826706) MGI PMID:9826706 NCBI chrNW_004624907:1,752,322...1,755,308 JBrowse link
G Hsd3b7 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 ISO RGD PMID:16081591 RGD:1599972 NCBI chrNW_004624782:14,054,028...14,057,248
Ensembl chrNW_004624782:14,053,765...14,057,241 		JBrowse link
G LOC101700018 sterol 26-hydroxylase, mitochondrial involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624823:6,199,807...6,258,273
Ensembl chrNW_004624823:6,200,047...6,258,001 		JBrowse link
G LOC101701685 cholesterol 7-alpha-monooxygenase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11279518), (PMID:15845870) InterPro
MGI
Ensembl		 PMID:11279518 PMID:15845870 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004624744:33,563,564...33,619,851
Ensembl chrNW_004624744:33,612,901...33,619,869 		JBrowse link
G LOC101708822 cholesterol 24-hydroxylase involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624734:4,242,070...4,267,027
Ensembl chrNW_004624734:4,242,511...4,266,975 		JBrowse link
G LOC101717854 24-hydroxycholesterol 7-alpha-hydroxylase acts_upstream_of_or_within ISO (PMID:10748047) MGI PMID:10748047 NCBI chrNW_004624754:13,980,180...14,033,591
Ensembl chrNW_004624754:13,980,354...14,034,098 		JBrowse link
G Scarb1 scavenger receptor class B member 1 acts_upstream_of_or_within ISO (PMID:10559220)
(PMID:11278646)		 MGI PMID:10559220 PMID:11278646 NCBI chrNW_004624747:23,970,782...24,010,683
Ensembl chrNW_004624747:23,973,648...24,010,820 		JBrowse link
cholesterol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:14747463)
(PMID:11559713)		 BHF-UCL
MGI		 PMID:11559713 PMID:14747463 NCBI chrNW_004624758:6,449,583...6,590,244
Ensembl chrNW_004624758:6,449,629...6,588,664 		JBrowse link
G Abca5 ATP binding cassette subfamily A member 5 involved_in ISO (PMID:25125465) UniProt PMID:25125465 NCBI chrNW_004624870:4,150,287...4,224,448
Ensembl chrNW_004624870:4,153,594...4,218,132 		JBrowse link
G Abcg1 ATP binding cassette subfamily G member 1 involved_in ISO (PMID:15994327) BHF-UCL PMID:15994327 NCBI chrNW_004624745:28,137,140...28,188,670
Ensembl chrNW_004624745:28,104,744...28,188,704 		JBrowse link
G Angptl3 angiopoietin like 3 involved_in ISO (PMID:17110602) BHF-UCL PMID:17110602 NCBI chrNW_004624742:31,261,719...31,269,877
Ensembl chrNW_004624742:31,260,611...31,270,122 		JBrowse link
G Aplp2 amyloid beta precursor like protein 2 acts_upstream_of_or_within ISO (PMID:17920016) MGI PMID:17920016 NCBI chrNW_004624812:4,490,798...4,571,500
Ensembl chrNW_004624812:4,490,798...4,571,623 		JBrowse link
G Apoa1 apolipoprotein A1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15995171)
(PMID:10357841), (PMID:15466405), (PMID:17071966), (PMID:7751823), (PMID:9327769), (PMID:9795222)		 Ensembl
TreeGrafter
MGI
UniProt		 PMID:7751823 PMID:9327769 PMID:9795222 PMID:10357841 PMID:15466405 More... GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624784:12,249,283...12,251,215
Ensembl chrNW_004624784:12,249,283...12,251,136 		JBrowse link
G Apoa2 apolipoprotein A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10357838), (PMID:8647961) Ensembl
MGI		 PMID:8647961 PMID:10357838 GO_REF:0000107 NCBI chrNW_004624794:164,351...165,676
Ensembl chrNW_004624794:164,370...166,248 		JBrowse link
G Apoa4 apolipoprotein A4 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624784:12,237,329...12,240,013
Ensembl chrNW_004624784:12,233,593...12,239,763 		JBrowse link
G Apoa5 apolipoprotein A5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624784:12,213,205...12,216,039
Ensembl chrNW_004624784:12,213,744...12,216,026 		JBrowse link
G Apob apolipoprotein B involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624738:3,579,747...3,622,508
Ensembl chrNW_004624738:3,580,033...3,620,192 		JBrowse link
G Apoc1 apolipoprotein C1 acts_upstream_of_or_within ISO (PMID:7848292) MGI PMID:7848292 NCBI chrNW_004624907:1,758,671...1,760,611
Ensembl chrNW_004624907:1,758,696...1,760,611 		JBrowse link
G Apoc3 apolipoprotein C3 acts_upstream_of_or_within ISO (PMID:11590213), (PMID:8089130)
(PMID:8864964)		 MGI PMID:8089130 PMID:8864964 PMID:11590213 NCBI chrNW_004624784:12,244,565...12,246,790
Ensembl chrNW_004624784:12,244,646...12,246,790 		JBrowse link
G Apoe apolipoprotein E acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:1423598), (PMID:8647961) MGI
TreeGrafter		 PMID:1423598 PMID:8647961 GO_REF:0000118 NCBI chrNW_004624907:1,752,322...1,755,308 JBrowse link
G Apof apolipoprotein F acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:22363685) MGI
TreeGrafter		 PMID:22363685 GO_REF:0000118 NCBI chrNW_004624802:11,640,942...11,645,030 JBrowse link
G App amyloid beta precursor protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17920016) Ensembl
MGI		 PMID:17920016 GO_REF:0000107 NCBI chrNW_004624745:13,904,912...14,159,374
Ensembl chrNW_004624745:13,902,577...14,159,372 		JBrowse link
G Cat catalase acts_upstream_of_or_within ISO (PMID:5087482) MGI PMID:5087482 NCBI chrNW_004624767:12,680,940...12,715,468
Ensembl chrNW_004624767:12,680,953...12,715,739 		JBrowse link
G Cebpa CCAAT enhancer binding protein alpha acts_upstream_of_or_within ISO (PMID:18974039) MGI PMID:18974039 NCBI chrNW_004624794:9,809,007...9,813,418 JBrowse link
G Cetp cholesteryl ester transfer protein involved_in IEA UniProt
TreeGrafter		 GO_REF:0000043 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004624746:29,035,282...29,053,867 JBrowse link
G Ch25h cholesterol 25-hydroxylase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9852097) Ensembl
MGI		 PMID:9852097 GO_REF:0000107 NCBI chrNW_004624737:39,649...41,241 JBrowse link
G Cln6 CLN6 transmembrane ER protein involved_in ISO (PMID:16857350) UniProt PMID:16857350 NCBI chrNW_004624781:4,866,896...4,879,321
Ensembl chrNW_004624781:4,866,927...4,879,321 		JBrowse link
G Cln8 CLN8 transmembrane ER and ERGIC protein involved_in ISO (PMID:16086686) UniProt PMID:16086686 NCBI chrNW_004624861:960,643...977,292
Ensembl chrNW_004624861:968,219...977,467 		JBrowse link
G Dhcr24 24-dehydrocholesterol reductase acts_upstream_of_or_within ISO (PMID:16407971) MGI PMID:16407971 NCBI chrNW_004624862:4,995,836...5,022,395
Ensembl chrNW_004624862:4,995,720...5,020,850 		JBrowse link
G Ebp EBP cholestenol delta-isomerase involved_in ISO (PMID:10391219) GO_Central PMID:10391219 NCBI chrNW_004624893:340,843...346,560
Ensembl chrNW_004624893:341,129...347,717 		JBrowse link
G Erlin1 ER lipid raft associated 1 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chrNW_004624737:11,977,397...12,018,437
Ensembl chrNW_004624737:11,977,397...12,018,438 		JBrowse link
G Erlin2 ER lipid raft associated 2 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chrNW_004624780:5,844,473...5,861,493
Ensembl chrNW_004624780:5,843,141...5,862,039 		JBrowse link
G Errfi1 ERBB receptor feedback inhibitor 1 acts_upstream_of_or_within ISO (PMID:28053990)
(PMID:22912762)		 MGI PMID:22912762 PMID:28053990 NCBI chrNW_004624818:3,868,089...3,882,960
Ensembl chrNW_004624818:3,868,814...3,882,960 		JBrowse link
G Fdx1 ferredoxin 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624784:5,406,459...5,460,581 JBrowse link
G Fdxr ferredoxin reductase involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004624801:4,714,341...4,722,588
Ensembl chrNW_004624801:4,713,519...4,722,612 		JBrowse link
G Fech ferrochelatase acts_upstream_of_or_within ISO (PMID:11160364) MGI PMID:11160364 NCBI chrNW_004624792:3,067,270...3,101,698
Ensembl chrNW_004624792:3,064,841...3,102,345 		JBrowse link
G Fgl1 fibrinogen like 1 acts_upstream_of_or_within ISO (PMID:23483972) MGI PMID:23483972 NCBI chrNW_004624769:21,308,319...21,350,026
Ensembl chrNW_004624769:21,308,280...21,350,026 		JBrowse link
G Gba1 glucosylceramidase beta 1 involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004624885:2,315,371...2,321,327
Ensembl chrNW_004624885:2,315,142...2,321,327 		JBrowse link
G Gba2 glucosylceramidase beta 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624868:5,045,566...5,056,419
Ensembl chrNW_004624868:5,045,594...5,056,416 		JBrowse link
G Hnf1a HNF1 homeobox A acts_upstream_of_or_within ISO (PMID:11279518) MGI PMID:11279518 NCBI chrNW_004624747:12,717,713...12,746,040
Ensembl chrNW_004624747:12,717,707...12,746,724 		JBrowse link
G Il4 interleukin 4 involved_in ISO (PMID:11971948) UniProt PMID:11971948 NCBI chrNW_004624733:39,412,800...39,420,079 JBrowse link
G Insig1 insulin induced gene 1 acts_upstream_of_or_within ISO (PMID:16100574) MGI PMID:16100574 NCBI chrNW_004624800:2,533,010...2,543,754
Ensembl chrNW_004624800:2,534,967...2,543,075 		JBrowse link
G Insig2 insulin induced gene 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16100574) UniProt
MGI		 PMID:16100574 GO_REF:0000043 NCBI chrNW_004624732:27,089,776...27,110,170
Ensembl chrNW_004624732:27,087,674...27,104,181 		JBrowse link
G Lcat lecithin-cholesterol acyltransferase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:10559507)
(PMID:9300780)		 MGI
UniProt
RGD		 PMID:746355 PMID:9300780 PMID:10559507 GO_REF:0000043 RGD:1581789 NCBI chrNW_004624746:18,438,308...18,441,650
Ensembl chrNW_004624746:18,437,429...18,441,806 		JBrowse link
G Ldlr low density lipoprotein receptor acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:17071966) MGI
UniProt		 PMID:17071966 GO_REF:0000043 NCBI chrNW_004624828:2,999,122...3,021,893
Ensembl chrNW_004624828:2,999,169...3,021,987 		JBrowse link
G Ldlrap1 low density lipoprotein receptor adaptor protein 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624764:9,675,917...9,699,597
Ensembl chrNW_004624764:9,675,845...9,699,597 		JBrowse link
G Lep leptin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15995171) Ensembl
MGI		 PMID:15995171 GO_REF:0000107 NCBI chrNW_004624783:7,708,820...7,721,610
Ensembl chrNW_004624783:7,708,588...7,721,727 		JBrowse link
G Lepr leptin receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15995171) Ensembl
MGI		 PMID:15995171 GO_REF:0000107 NCBI chrNW_004624742:29,221,742...29,313,273
Ensembl chrNW_004624742:29,223,392...29,337,049 		JBrowse link
G Lipa lipase A, lysosomal acid type acts_upstream_of_or_within ISO (PMID:30639734)
(PMID:24370824)		 MGI PMID:24370824 PMID:30639734 NCBI chrNW_004624737:49,471...82,981
Ensembl chrNW_004624737:49,371...83,514 		JBrowse link
G Lipc lipase C, hepatic type acts_upstream_of_or_within ISO (PMID:10357838) MGI PMID:10357838 NCBI chrNW_004624781:13,342,469...13,468,120
Ensembl chrNW_004624781:13,342,357...13,455,055 		JBrowse link
G Lipe lipase E, hormone sensitive type involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004624907:360,462...379,266
Ensembl chrNW_004624907:363,572...379,194 		JBrowse link
G LOC101700018 sterol 26-hydroxylase, mitochondrial involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:2175615 GO_REF:0000118 RGD:1299597 NCBI chrNW_004624823:6,199,807...6,258,273
Ensembl chrNW_004624823:6,200,047...6,258,001 		JBrowse link
G LOC101700701 cytochrome P450 11B1, mitochondrial involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624735:13,701,382...13,708,750 JBrowse link
G LOC101700851 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624802:10,176,865...10,181,725
Ensembl chrNW_004624802:10,176,919...10,181,657 		JBrowse link
G LOC101701311 cytochrome P450 11B1, mitochondrial involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624735:13,726,649...13,734,536 JBrowse link
G LOC101701685 cholesterol 7-alpha-monooxygenase involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624744:33,563,564...33,619,851
Ensembl chrNW_004624744:33,612,901...33,619,869 		JBrowse link
G LOC101704598 cholesterol side-chain cleavage enzyme, mitochondrial involved_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624781:288,594...298,876
Ensembl chrNW_004624781:288,594...300,429 		JBrowse link
G LOC101716773 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624790:2,183,079...2,200,219
Ensembl chrNW_004624790:2,182,598...2,200,425 		JBrowse link
G LOC101724157 lanosterol 14-alpha demethylase involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624809:1,080,427...1,110,802
Ensembl chrNW_004624809:1,080,656...1,100,254 		JBrowse link
G Lrp1 LDL receptor related protein 1 acts_upstream_of_or_within ISO (PMID:17920016) MGI PMID:17920016 NCBI chrNW_004624802:10,734,907...10,812,888
Ensembl chrNW_004624802:10,734,263...10,812,763 		JBrowse link
G Lrp5 LDL receptor related protein 5 acts_upstream_of_or_within ISO (PMID:12509515) MGI PMID:12509515 NCBI chrNW_004624767:18,438,165...18,551,362
Ensembl chrNW_004624767:18,438,274...18,551,338 		JBrowse link
G Nfe2l1 NFE2 like bZIP transcription factor 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624795:4,652,221...4,663,341
Ensembl chrNW_004624795:4,652,637...4,662,454 		JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624770:8,592,473...8,642,063
Ensembl chrNW_004624770:8,592,457...8,641,843 		JBrowse link
G Npc1l1 NPC1 like intracellular cholesterol transporter 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624740:7,590,041...7,609,574
Ensembl chrNW_004624740:7,590,046...7,609,420 		JBrowse link
G Nsdhl NAD(P) dependent steroid dehydrogenase-like acts_upstream_of_or_within ISO (PMID:10369263) MGI PMID:10369263 NCBI chrNW_004624883:4,039,876...4,062,309
Ensembl chrNW_004624883:4,039,898...4,066,123 		JBrowse link
G Pcsk9 proprotein convertase subtilisin/kexin type 9 acts_upstream_of_or_within ISO (PMID:17242417) MGI PMID:17242417 NCBI chrNW_004624862:4,873,457...4,895,836
Ensembl chrNW_004624862:4,879,561...4,895,776 		JBrowse link
G Pctp phosphatidylcholine transfer protein acts_upstream_of_or_within ISO (PMID:15845870) MGI PMID:15845870 NCBI chrNW_004624795:10,972,998...11,000,163
Ensembl chrNW_004624795:10,972,933...10,998,944 		JBrowse link
G Pip4p1 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624825:4,708,378...4,711,846
Ensembl chrNW_004624825:4,708,093...4,711,845 		JBrowse link
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within ISO (PMID:25429154) MGI PMID:25429154 NCBI chrNW_004624877:3,293,980...3,328,337
Ensembl chrNW_004624877:3,292,244...3,328,660 		JBrowse link
G Pon1 paraoxonase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9685159) Ensembl
MGI		 PMID:9685159 GO_REF:0000107 NCBI chrNW_004624813:1,953,796...1,979,846
Ensembl chrNW_004624813:1,949,614...1,979,882 		JBrowse link
G Scap SREBF chaperone acts_upstream_of_or_within ISO (PMID:11358865) MGI PMID:11358865 NCBI chrNW_004624730:73,926,978...73,975,337
Ensembl chrNW_004624730:73,927,010...73,975,337 		JBrowse link
G Smpd1 sphingomyelin phosphodiesterase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22383528) Ensembl
MGI		 PMID:22383528 GO_REF:0000107 NCBI chrNW_004624817:7,909,777...7,913,419
Ensembl chrNW_004624817:7,909,468...7,913,417 		JBrowse link
G Soat1 sterol O-acyltransferase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:9756919)
(PMID:15845870)		 MGI
TreeGrafter
UniProt		 PMID:9756919 PMID:15845870 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004624771:2,992,752...3,055,842
Ensembl chrNW_004624771:2,994,696...3,055,916 		JBrowse link
G Soat2 sterol O-acyltransferase 2 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:9756919) RGD
TreeGrafter
MGI
UniProt		 PMID:9756919 PMID:12217884 GO_REF:0000043 GO_REF:0000118 RGD:625687 NCBI chrNW_004624904:1,160,275...1,170,249
Ensembl chrNW_004624904:1,160,203...1,170,935 		JBrowse link
G Sqle squalene epoxidase involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:9300786 GO_REF:0000118 RGD:1625701 NCBI chrNW_004624735:30,225,307...30,246,202
Ensembl chrNW_004624735:30,226,465...30,246,294 		JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 involved_in ISO
IEA		 RGD
UniProt		 PMID:18071061 GO_REF:0000043 RGD:1643359 NCBI chrNW_004624849:3,602,103...3,623,922
Ensembl chrNW_004624849:3,602,261...3,623,465 		JBrowse link
G Srebf2 sterol regulatory element binding transcription factor 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624752:6,815,075...6,871,674
Ensembl chrNW_004624752:6,816,468...6,871,567 		JBrowse link
G Star steroidogenic acute regulatory protein involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004624780:5,494,430...5,501,063
Ensembl chrNW_004624780:5,493,786...5,502,030 		JBrowse link
G Sult2b1 sulfotransferase family 2B member 1 involved_in ISO (PMID:28575648) UniProt PMID:28575648 NCBI chrNW_004624832:5,268,000...5,290,888
Ensembl chrNW_004624832:5,267,900...5,290,991 		JBrowse link
G Tnfsf4 TNF superfamily member 4 acts_upstream_of_or_within ISO (PMID:3473481) MGI PMID:3473481 NCBI chrNW_004624771:8,580,489...8,599,735 JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan involved_in ISO (PMID:31391339) UniProt PMID:31391339 NCBI chrNW_004624817:364,543...379,742
Ensembl chrNW_004624817:366,101...373,034 		JBrowse link
G Vldlr very low density lipoprotein receptor involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624736:7,280,478...7,316,897
Ensembl chrNW_004624736:7,280,490...7,316,946 		JBrowse link
negative regulation of cholesterol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E involved_in ISO (PMID:1917954) RGD
BHF-UCL		 PMID:1917954 PMID:9225228 RGD:10059686 NCBI chrNW_004624907:1,752,322...1,755,308 JBrowse link
G Chlsn cholesin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624740:26,552,102...26,671,059
Ensembl chrNW_004624740:26,549,264...26,662,409 		JBrowse link
G Erlin1 ER lipid raft associated 1 involved_in ISO (PMID:24217618) UniProt PMID:24217618 NCBI chrNW_004624737:11,977,397...12,018,437
Ensembl chrNW_004624737:11,977,397...12,018,438 		JBrowse link
G Erlin2 ER lipid raft associated 2 involved_in ISO (PMID:24217618) UniProt PMID:24217618 NCBI chrNW_004624780:5,844,473...5,861,493
Ensembl chrNW_004624780:5,843,141...5,862,039 		JBrowse link
G Insig1 insulin induced gene 1 involved_in ISO (PMID:26311497) UniProt PMID:26311497 NCBI chrNW_004624800:2,533,010...2,543,754
Ensembl chrNW_004624800:2,534,967...2,543,075 		JBrowse link
negative regulation of cholesterol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ch25h cholesterol 25-hydroxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624737:39,649...41,241 JBrowse link
positive regulation of cholesterol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcg1 ATP binding cassette subfamily G member 1 involved_in ISO (PMID:17916878) BHF-UCL PMID:17916878 NCBI chrNW_004624745:28,137,140...28,188,670
Ensembl chrNW_004624745:28,104,744...28,188,704 		JBrowse link
G Abcg4 ATP binding cassette subfamily G member 4 involved_in ISO (PMID:17916878) BHF-UCL PMID:17916878 NCBI chrNW_004624784:14,529,957...14,545,125
Ensembl chrNW_004624784:14,529,976...14,545,246 		JBrowse link
G Fdps farnesyl diphosphate synthase ISO RGD PMID:18637708 RGD:2316295 NCBI chrNW_004624885:942,998...949,529
Ensembl chrNW_004624885:943,571...949,528 		JBrowse link
G Fgf1 fibroblast growth factor 1 involved_in ISO (PMID:19229075) BHF-UCL PMID:19229075 NCBI chrNW_004624774:1,779,168...1,867,321
Ensembl chrNW_004624774:1,779,170...1,867,300 		JBrowse link
G Gnai1 G protein subunit alpha i1 involved_in ISO (PMID:38503280) UniProt PMID:38503280 NCBI chrNW_004624739:28,995,173...29,074,354
Ensembl chrNW_004624739:28,995,179...29,073,813 		JBrowse link
G LOC101701685 cholesterol 7-alpha-monooxygenase involved_in ISO PMID:23536474 BHF-UCL PMID:23536474 RGD:13792517 NCBI chrNW_004624744:33,563,564...33,619,851
Ensembl chrNW_004624744:33,612,901...33,619,869 		JBrowse link
G Mapk1 mitogen-activated protein kinase 1 involved_in ISO (PMID:38503280) UniProt PMID:38503280 NCBI chrNW_004624747:1,296,062...1,389,674
Ensembl chrNW_004624747:1,296,221...1,389,757 		JBrowse link
G Mbtps2 membrane bound transcription factor peptidase, site 2 involved_in ISO (PMID:11163209) UniProt PMID:11163209 NCBI chrNW_004624829:6,795,563...6,839,416
Ensembl chrNW_004624829:6,795,528...6,834,604 		JBrowse link
G Npy1r neuropeptide Y receptor Y1 ISO RGD PMID:32976883 RGD:405096663 NCBI chrNW_004624758:13,542,467...13,545,106
Ensembl chrNW_004624758:13,536,493...13,545,599 		JBrowse link
G Paqr3 progestin and adipoQ receptor family member 3 involved_in ISO (PMID:26311497) UniProt PMID:26311497 NCBI chrNW_004624757:12,140,041...12,303,568
Ensembl chrNW_004624757:12,138,681...12,159,661 		JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha involved_in ISO (PMID:38503280) UniProt PMID:38503280 NCBI chrNW_004624901:1,319,426...1,336,848
Ensembl chrNW_004624901:1,319,062...1,336,744 		JBrowse link
G Qki QKI, KH domain containing RNA binding involved_in ISO (PMID:33942715) UniProt PMID:33942715 NCBI chrNW_004624785:15,738,231...15,845,051
Ensembl chrNW_004624785:15,739,187...15,845,024 		JBrowse link
G Scap SREBF chaperone involved_in ISO (PMID:32322062) UniProt PMID:32322062 NCBI chrNW_004624730:73,926,978...73,975,337
Ensembl chrNW_004624730:73,927,010...73,975,337 		JBrowse link
G Scp2 sterol carrier protein 2 ISO RGD PMID:2554812 RGD:9850260 NCBI chrNW_004624859:106,405...252,870
Ensembl chrNW_004624859:107,258...252,756 		JBrowse link
G Sec14l2 SEC14 like lipid binding 2 ISO RGD PMID:11226224 RGD:727312 NCBI chrNW_004624747:6,719,549...6,742,794
Ensembl chrNW_004624747:6,719,498...6,742,794 		JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:12177166), (PMID:32322062)
(PMID:8833906), (PMID:9062341)
(PMID:9329978)
(PMID:16046411)		 UniProt
MGI		 PMID:8833906 PMID:9062341 PMID:9329978 PMID:12177166 PMID:16046411 More... NCBI chrNW_004624849:3,602,103...3,623,922
Ensembl chrNW_004624849:3,602,261...3,623,465 		JBrowse link
G Srebf2 sterol regulatory element binding transcription factor 2 involved_in ISO (PMID:12177166), (PMID:32322062), (PMID:38503280)
(PMID:33942715), (PMID:34021134)		 UniProt PMID:12177166 PMID:32322062 PMID:33942715 PMID:34021134 PMID:38503280 NCBI chrNW_004624752:6,815,075...6,871,674
Ensembl chrNW_004624752:6,816,468...6,871,567 		JBrowse link
positive regulation of cholesterol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa1 apolipoprotein A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624784:12,249,283...12,251,215
Ensembl chrNW_004624784:12,249,283...12,251,136 		JBrowse link
G Apoe apolipoprotein E involved_in ISO (PMID:15654758) BHF-UCL PMID:15654758 NCBI chrNW_004624907:1,752,322...1,755,308 JBrowse link
G Stard4 StAR related lipid transfer domain containing 4 involved_in ISO (PMID:18403318) BHF-UCL PMID:18403318 NCBI chrNW_004624743:29,278,327...29,298,050
Ensembl chrNW_004624743:29,282,558...29,293,854 		JBrowse link
regulation of cholesterol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 NOT|involved_in ISO (PMID:21810484) ARUK-UCL PMID:21810484 NCBI chrNW_004624760:880,216...898,753
Ensembl chrNW_004624760:880,148...898,751 		JBrowse link
G Apob apolipoprotein B acts_upstream_of_or_within ISO (PMID:16455790) MGI PMID:16455790 NCBI chrNW_004624738:3,579,747...3,622,508
Ensembl chrNW_004624738:3,580,033...3,620,192 		JBrowse link
G Aqp8 aquaporin 8 involved_in ISO (PMID:30579780) UniProt PMID:30579780 NCBI chrNW_004624782:10,074,875...10,082,628
Ensembl chrNW_004624782:10,075,062...10,082,076 		JBrowse link
G Dhcr7 7-dehydrocholesterol reductase ISO RGD PMID:10329655 RGD:632010 NCBI chrNW_004624767:16,118,157...16,132,225
Ensembl chrNW_004624767:16,118,052...16,132,834 		JBrowse link
G Erlin1 ER lipid raft associated 1 involved_in ISO (PMID:24217618) ComplexPortal PMID:24217618 NCBI chrNW_004624737:11,977,397...12,018,437
Ensembl chrNW_004624737:11,977,397...12,018,438 		JBrowse link
G Erlin2 ER lipid raft associated 2 involved_in ISO (PMID:24217618) ComplexPortal PMID:24217618 NCBI chrNW_004624780:5,844,473...5,861,493
Ensembl chrNW_004624780:5,843,141...5,862,039 		JBrowse link
G Gpr146 G protein-coupled receptor 146 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624740:26,585,913...26,603,517
Ensembl chrNW_004624740:26,586,517...26,603,517 		JBrowse link
G Lpcat3 lysophosphatidylcholine acyltransferase 3 involved_in ISO (PMID:29395055) UniProt PMID:29395055 NCBI chrNW_004624860:3,611,300...3,642,682
Ensembl chrNW_004624860:3,611,300...3,642,686 		JBrowse link
G Pex2 peroxisomal biogenesis factor 2 acts_upstream_of_or_within ISO (PMID:14673138) MGI PMID:14673138 NCBI chrNW_004624744:14,227,430...14,245,082
Ensembl chrNW_004624744:14,240,570...14,245,183 		JBrowse link
G Scap SREBF chaperone acts_upstream_of_or_within ISO (PMID:16054043) MGI PMID:16054043 NCBI chrNW_004624730:73,926,978...73,975,337
Ensembl chrNW_004624730:73,927,010...73,975,337 		JBrowse link
regulation of cholesterol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcg1 ATP binding cassette subfamily G member 1 involved_in ISO (PMID:16556852) BHF-UCL PMID:16556852 NCBI chrNW_004624745:28,137,140...28,188,670
Ensembl chrNW_004624745:28,104,744...28,188,704 		JBrowse link
G Acadl acyl-CoA dehydrogenase long chain involved_in ISO (PMID:15639194) BHF-UCL PMID:15639194 NCBI chrNW_004624765:6,018,534...6,050,736 JBrowse link
G Acadvl acyl-CoA dehydrogenase very long chain involved_in ISO (PMID:15639194) BHF-UCL PMID:15639194 NCBI chrNW_004624786:9,838,102...9,843,506
Ensembl chrNW_004624786:9,838,227...9,843,332 		JBrowse link
G Apoe apolipoprotein E involved_in ISO (PMID:24412220) ARUK-UCL PMID:24412220 NCBI chrNW_004624907:1,752,322...1,755,308 JBrowse link
G Arv1 ARV1 homolog, fatty acid homeostasis modulator involved_in
acts_upstream_of_or_within		 ISO (PMID:20663892) UniProt
MGI		 PMID:20663892 NCBI chrNW_004624775:18,634,671...18,652,476
Ensembl chrNW_004624775:18,638,010...18,652,985 		JBrowse link
G Dgat2 diacylglycerol O-acyltransferase 2 ISO RGD PMID:17526931 RGD:10400884 NCBI chrNW_004624817:1,386,876...1,418,129
Ensembl chrNW_004624817:1,386,764...1,418,300 		JBrowse link
G Dgkq diacylglycerol kinase theta involved_in ISO (PMID:24369117) ParkinsonsUK-UCL PMID:24369117 NCBI chrNW_004624755:26,179,099...26,197,764
Ensembl chrNW_004624755:26,179,162...26,189,901 		JBrowse link
G Ephx2 epoxide hydrolase 2 involved_in ISO (PMID:18974052) UniProt PMID:18974052 NCBI chrNW_004624758:22,216,462...22,252,467
Ensembl chrNW_004624758:22,221,314...22,254,813 		JBrowse link
G Fmo5 flavin containing dimethylaniline monoxygenase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624772:16,132,648...16,155,717
Ensembl chrNW_004624772:16,131,954...16,155,477 		JBrowse link
G Gnb3 G protein subunit beta 3 involved_in ISO (PMID:29206867) ARUK-UCL PMID:29206867 NCBI chrNW_004624860:3,509,185...3,515,025
Ensembl chrNW_004624860:3,509,397...3,515,352 		JBrowse link
G Ldlr low density lipoprotein receptor involved_in ISO (PMID:24412220) ARUK-UCL PMID:24412220 NCBI chrNW_004624828:2,999,122...3,021,893
Ensembl chrNW_004624828:2,999,169...3,021,987 		JBrowse link
G Lmf1 lipase maturation factor 1 acts_upstream_of_or_within ISO (PMID:6857276) MGI PMID:6857276 NCBI chrNW_004624913:1,651,435...1,750,767
Ensembl chrNW_004624913:1,655,386...1,762,094 		JBrowse link
G Serpina12 serpin family A member 12 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22837305) Ensembl
MGI		 PMID:22837305 GO_REF:0000107 NCBI chrNW_004624734:7,191,049...7,204,386
Ensembl chrNW_004624734:7,191,010...7,206,020 		JBrowse link
G Thrb thyroid hormone receptor beta ISO RGD PMID:17878314 RGD:2315101 NCBI chrNW_004624788:1,950,888...2,348,895
Ensembl chrNW_004624788:1,950,890...2,349,343 		JBrowse link
G Ttc39b tetratricopeptide repeat domain 39B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624736:19,304,586...19,480,182
Ensembl chrNW_004624736:19,349,599...19,480,039 		JBrowse link
sterol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ch25h cholesterol 25-hydroxylase involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624737:39,649...41,241 JBrowse link
G Dhcr7 7-dehydrocholesterol reductase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15005800) InterPro
MGI		 PMID:15005800 GO_REF:0000002 NCBI chrNW_004624767:16,118,157...16,132,225
Ensembl chrNW_004624767:16,118,052...16,132,834 		JBrowse link
G Ebp EBP cholestenol delta-isomerase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10391218) UniProt
MGI		 PMID:10391218 GO_REF:0000043 NCBI chrNW_004624893:340,843...346,560
Ensembl chrNW_004624893:341,129...347,717 		JBrowse link
G Erg28 ergosterol biosynthesis 28 homolog involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624734:26,021,761...26,031,026
Ensembl chrNW_004624734:26,021,880...26,030,440 		JBrowse link
G Faxdc2 fatty acid hydroxylase domain containing 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624733:34,473,593...34,503,414
Ensembl chrNW_004624733:34,472,984...34,500,997 		JBrowse link
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624951:681,559...711,476
Ensembl chrNW_004624951:682,178...711,474 		JBrowse link
G Insig1 insulin induced gene 1 acts_upstream_of_or_within ISO (PMID:16955138) MGI PMID:16955138 NCBI chrNW_004624800:2,533,010...2,543,754
Ensembl chrNW_004624800:2,534,967...2,543,075 		JBrowse link
G Insig2 insulin induced gene 2 acts_upstream_of_or_within ISO (PMID:16955138) MGI PMID:16955138 NCBI chrNW_004624732:27,089,776...27,110,170
Ensembl chrNW_004624732:27,087,674...27,104,181 		JBrowse link
G Lbr lamin B receptor involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624835:6,469,677...6,489,790 JBrowse link
G Msmo1 methylsterol monooxygenase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624758:11,629,824...11,644,071
Ensembl chrNW_004624758:11,629,007...11,644,263 		JBrowse link
G Pmvk phosphomevalonate kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624885:2,544,136...2,552,591
Ensembl chrNW_004624885:2,543,862...2,553,237 		JBrowse link
G Sc5d sterol-C5-desaturase involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624880:3,874,337...3,896,721 JBrowse link
G Sqle squalene epoxidase involved_in IEA InterPro
TreeGrafter
Ensembl
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624735:30,225,307...30,246,202
Ensembl chrNW_004624735:30,226,465...30,246,294 		JBrowse link
G Tm7sf2 transmembrane 7 superfamily member 2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624767:21,287,398...21,291,619
Ensembl chrNW_004624767:21,285,395...21,292,922 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15172
    cellular process 14790
      metabolic process 9450
        organic hydroxy compound metabolic process 493
          sterol metabolic process 138
            cholesterol metabolic process + 130
            ecdysone metabolic process + 0
            ergosterol metabolic process + 0
            sterol biosynthetic process + 59
            sterol catabolic process + 8
            zymosterol metabolic process + 0
Path 2
Term Annotations click to browse term
  biological_process 15172
    cellular process 14790
      metabolic process 9450
        primary metabolic process 8379
          lipid metabolic process 1189
            steroid metabolic process 274
              sterol metabolic process 138
                cholesterol metabolic process + 130
                ecdysone metabolic process + 0
                ergosterol metabolic process + 0
                sterol biosynthetic process + 59
                sterol catabolic process + 8
                zymosterol metabolic process + 0
paths to the root