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ONTOLOGY REPORT - ANNOTATIONS

Term:sterol metabolic process
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Accession:GO:0016125 term browser browse the term
Definition:The chemical reactions and pathways involving sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule.
Synonyms:exact_synonym: sterol metabolism

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sterol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARV1 ARV1 homolog, fatty acid homeostasis modulator involved_in IEA UniProt
TreeGrafter		 GO_REF:0000104 GO_REF:0000118 NCBI chr25:68,251,110...68,271,530
Ensembl chr25:68,251,130...68,271,607 		JBrowse link
G CYP26B1 cytochrome P450 family 26 subfamily B member 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:35,030,011...35,057,164
Ensembl chr14:35,038,654...35,057,176 		JBrowse link
G CYP39A1 cytochrome P450 family 39 subfamily A member 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr17:25,621,297...25,726,055
Ensembl chr17:25,621,305...25,728,617 		JBrowse link
G CYP51A1 cytochrome P450 family 51 subfamily A member 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr21:56,865,498...56,888,196
Ensembl chr21:56,865,312...56,886,698 		JBrowse link
G CYP7A1 cytochrome P450 family 7 subfamily A member 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr 8:54,475,801...54,489,329
Ensembl chr 8:54,477,105...54,485,649 		JBrowse link
G DHCR24 24-dehydrocholesterol reductase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:14684813) MGI
Ensembl		 PMID:14684813 GO_REF:0000107 NCBI chr20:78,052,565...78,088,918
Ensembl chr20:78,052,607...78,086,303 		JBrowse link
G EBP EBP cholestenol delta-isomerase involved_in IEA InterPro GO_REF:0000002 NCBI chr  X:45,652,398...45,660,551
Ensembl chr  X:45,653,356...45,660,291 		JBrowse link
G EBPL EBP like involved_in IEA InterPro GO_REF:0000002 NCBI chr 3:27,576,087...27,606,770
Ensembl chr 3:27,576,329...27,606,684 		JBrowse link
G LIPA lipase A, lysosomal acid type acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:21289032), (PMID:21697390), (PMID:25147230) RGD
MGI
Ensembl		 PMID:10419291 PMID:21289032 PMID:21697390 PMID:25147230 GO_REF:0000107 RGD:1626385 NCBI chr 9:82,639,220...82,677,479
Ensembl chr 9:82,638,621...82,677,488 		JBrowse link
G LOC103216270 cytochrome P450 26A1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:86,310,142...86,328,622
Ensembl chr 9:86,325,401...86,328,775 		JBrowse link
G LOC119618102 cytochrome P450 26C1 involved_in IEA TreeGrafter GO_REF:0000118 Ensembl chr 9:86,311,950...86,319,834 JBrowse link
G LSS lanosterol synthase ISO RGD PMID:16440058 RGD:1626611 NCBI chr 2:89,809,065...89,846,295
Ensembl chr 2:89,811,698...89,846,242 		JBrowse link
G NPC1 NPC intracellular cholesterol transporter 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:21289032), (PMID:21697390) MGI
Ensembl		 PMID:21289032 PMID:21697390 GO_REF:0000107 NCBI chr18:56,956,557...57,007,951
Ensembl chr18:56,956,174...57,007,474 		JBrowse link
G NPC2 NPC intracellular cholesterol transporter 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21289032) Ensembl
MGI		 PMID:21289032 GO_REF:0000107 NCBI chr24:51,685,699...51,700,557
Ensembl chr24:51,685,609...51,700,557 		JBrowse link
G SQLE squalene epoxidase involved_in IEA UniProt GO_REF:0000117 NCBI chr 8:119,586,639...119,610,980
Ensembl chr 8:119,586,659...119,611,142 		JBrowse link
cholesterol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA1 apolipoprotein A1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8647961) Ensembl
MGI		 PMID:8647961 GO_REF:0000107 NCBI chr 1:108,201,967...108,203,902
Ensembl chr 1:108,201,439...108,203,609 		JBrowse link
G CFTR CF transmembrane conductance regulator acts_upstream_of_or_within ISO (PMID:17085523) MGI PMID:17085523 NCBI chr21:86,154,313...86,332,436 JBrowse link
G CYB5R3 cytochrome b5 reductase 3 involved_in IEA UniProt GO_REF:0000043 Ensembl chr19:25,173,476...25,199,110 JBrowse link
G DHCR24 24-dehydrocholesterol reductase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:11519011)
(PMID:14684813), (PMID:16321981), (PMID:16513830)		 MGI
Ensembl		 PMID:11519011 PMID:14684813 PMID:16321981 PMID:16513830 GO_REF:0000107 NCBI chr20:78,052,565...78,088,918
Ensembl chr20:78,052,607...78,086,303 		JBrowse link
G DHCR7 7-dehydrocholesterol reductase involved_in ISO
IEA		 RGD
TreeGrafter
UniProt
Ensembl		 PMID:9831636 PMID:10329655 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 RGD:2316918 RGD:632010 NCBI chr 1:3,243,263...3,257,332
Ensembl chr 1:3,243,313...3,257,487 		JBrowse link
G EBP EBP cholestenol delta-isomerase involved_in ISO
IEA		 RGD
Ensembl
TreeGrafter		 PMID:11171067 GO_REF:0000107 GO_REF:0000118 RGD:628445 NCBI chr  X:45,652,398...45,660,551
Ensembl chr  X:45,653,356...45,660,291 		JBrowse link
G FDFT1 farnesyl-diphosphate farnesyltransferase 1 involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:16440058 GO_REF:0000118 RGD:1626611 NCBI chr 8:7,272,580...7,306,859
Ensembl chr 8:7,271,509...7,306,760 		JBrowse link
G G6PD glucose-6-phosphate dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:128,768,028...128,788,366
Ensembl chr  X:128,770,268...128,786,961 		JBrowse link
G HMGCR 3-hydroxy-3-methylglutaryl-CoA reductase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15845870), (PMID:7798939), (PMID:8647961) Ensembl
MGI		 PMID:7798939 PMID:8647961 PMID:15845870 GO_REF:0000107 NCBI chr 4:69,664,784...69,690,343
Ensembl chr 4:69,665,417...69,688,686 		JBrowse link
G HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 4:42,083,523...42,107,410
Ensembl chr 4:42,080,949...42,107,409 		JBrowse link
G HMGCS2 3-hydroxy-3-methylglutaryl-CoA synthase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr20:14,018,669...14,040,934
Ensembl chr20:14,019,692...14,041,016 		JBrowse link
G HSD17B7 hydroxysteroid 17-beta dehydrogenase 7 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:12829805) MGI
Ensembl
TreeGrafter		 PMID:12829805 GO_REF:0000107 GO_REF:0000118 NCBI chr20:1,271,259...1,289,232
Ensembl chr20:1,273,052...1,288,930 		JBrowse link
G IDI1 isopentenyl-diphosphate delta isomerase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:995,608...1,011,226
Ensembl chr 9:996,909...1,003,963 		JBrowse link
G INSIG1 insulin induced gene 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16955138) Ensembl
TreeGrafter
MGI		 PMID:16955138 GO_REF:0000107 GO_REF:0000118 NCBI chr21:123,448,614...123,460,778
Ensembl chr21:123,449,106...123,460,807 		JBrowse link
G INSIG2 insulin induced gene 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16955138) Ensembl
TreeGrafter
MGI		 PMID:16955138 GO_REF:0000107 GO_REF:0000118 NCBI chr10:12,198,390...12,219,002
Ensembl chr10:12,196,990...12,219,023 		JBrowse link
G LBR lamin B receptor involved_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr25:4,326,872...4,353,208
Ensembl chr25:4,330,849...4,351,401 		JBrowse link
G LIPA lipase A, lysosomal acid type involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25147230), (PMID:29599133) Ensembl
MGI		 PMID:25147230 PMID:29599133 GO_REF:0000107 NCBI chr 9:82,639,220...82,677,479
Ensembl chr 9:82,638,621...82,677,488 		JBrowse link
G LOC103233018 liver carboxylesterase 1 involved_in ISO (PMID:11015575) BHF-UCL PMID:11015575 NCBI chr 5:41,710,500...41,745,483 JBrowse link
G LSS lanosterol synthase involved_in ISO
IEA		 RGD
Ensembl
TreeGrafter		 PMID:1429550 PMID:16440058 GO_REF:0000107 GO_REF:0000118 RGD:1626611 RGD:2316919 NCBI chr 2:89,809,065...89,846,295
Ensembl chr 2:89,811,698...89,846,242 		JBrowse link
G MVD mevalonate diphosphate decarboxylase involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 NCBI chr 5:74,031,470...74,049,066
Ensembl chr 5:74,031,316...74,049,011 		JBrowse link
G MVK mevalonate kinase involved_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chr11:104,812,882...104,837,089
Ensembl chr11:104,813,846...104,835,517 		JBrowse link
G NPC1L1 NPC1 like intracellular cholesterol transporter 1 involved_in ISO (PMID:17140581) HGNC-UCL PMID:17140581 NCBI chr21:14,129,413...14,163,916
Ensembl chr21:14,130,767...14,163,907 		JBrowse link
G PMVK phosphomevalonate kinase involved_in IEA UniProt
Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr20:8,893,297...8,906,882
Ensembl chr20:8,894,786...8,906,873 		JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 4:39,516,307...39,553,627 JBrowse link
G PRKAA2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr20:76,258,063...76,319,512
Ensembl chr20:76,259,763...76,319,430 		JBrowse link
G SREBF1 sterol regulatory element binding transcription factor 1 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:9329978) Ensembl
MGI		 PMID:9329978 GO_REF:0000107 NCBI chr16:16,847,603...16,874,239
Ensembl chr16:16,845,491...16,859,554 		JBrowse link
G TM7SF2 transmembrane 7 superfamily member 2 involved_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:9,112,528...9,117,201
Ensembl chr 1:9,112,710...9,116,898 		JBrowse link
cholesterol biosynthetic process via 24,25-dihydrolanosterol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP51A1 cytochrome P450 family 51 subfamily A member 1 ISO RGD PMID:7581240 RGD:2316902 NCBI chr21:56,865,498...56,888,196
Ensembl chr21:56,865,312...56,886,698 		JBrowse link
cholesterol biosynthetic process via desmosterol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DHCR24 24-dehydrocholesterol reductase involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:78,052,565...78,088,918
Ensembl chr20:78,052,607...78,086,303 		JBrowse link
cholesterol biosynthetic process via lathosterol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DHCR7 7-dehydrocholesterol reductase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:3,243,263...3,257,332
Ensembl chr 1:3,243,313...3,257,487 		JBrowse link
G SC5D sterol-C5-desaturase involved_in ISO
IEA		 RGD
Ensembl		 PMID:7961720 GO_REF:0000107 RGD:2316911 NCBI chr 1:112,706,511...112,720,860
Ensembl chr 1:112,706,545...112,719,722 		JBrowse link
cholesterol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKR1D1 aldo-keto reductase family 1 member D1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:106,705,197...106,822,194
Ensembl chr21:106,780,339...106,822,696 		JBrowse link
G APOE apolipoprotein E involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9826706) Ensembl
MGI		 PMID:9826706 GO_REF:0000107 NCBI chr 6:38,377,154...38,381,219
Ensembl chr 6:38,376,887...38,381,438 		JBrowse link
G CYP27A1 cytochrome P450 family 27 subfamily A member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:104,682,437...104,723,781
Ensembl chr10:104,682,673...104,726,687 		JBrowse link
G CYP39A1 cytochrome P450 family 39 subfamily A member 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:10748047) MGI
Ensembl		 PMID:10748047 GO_REF:0000107 NCBI chr17:25,621,297...25,726,055
Ensembl chr17:25,621,305...25,728,617 		JBrowse link
G CYP46A1 cytochrome P450 family 46 subfamily A member 1 involved_in IEA InterPro
Ensembl
TreeGrafter		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr24:77,641,068...77,684,722
Ensembl chr24:77,641,034...77,684,741 		JBrowse link
G CYP7A1 cytochrome P450 family 7 subfamily A member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11279518), (PMID:15845870) Ensembl
MGI
InterPro		 PMID:11279518 PMID:15845870 GO_REF:0000002 GO_REF:0000107 NCBI chr 8:54,475,801...54,489,329
Ensembl chr 8:54,477,105...54,485,649 		JBrowse link
G HSD3B7 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 ISO RGD PMID:16081591 RGD:1599972 NCBI chr 5:27,675,591...27,680,011
Ensembl chr 5:27,676,502...27,679,046 		JBrowse link
G SCARB1 scavenger receptor class B member 1 acts_upstream_of_or_within ISO (PMID:10559220)
(PMID:11278646)		 MGI PMID:10559220 PMID:11278646 NCBI chr11:120,134,485...120,223,512
Ensembl chr11:120,134,874...120,216,904 		JBrowse link
cholesterol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA1 ATP binding cassette subfamily A member 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:11559713) MGI
Ensembl		 PMID:11559713 GO_REF:0000107 NCBI chr12:34,587,123...34,734,936
Ensembl chr12:34,587,118...34,731,642 		JBrowse link
G ABCA5 ATP binding cassette subfamily A member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:52,278,563...52,373,218
Ensembl chr16:52,278,573...52,362,273 		JBrowse link
G ABCG1 ATP binding cassette subfamily G member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:86,098,818...86,176,101
Ensembl chr 2:86,099,414...86,179,949 		JBrowse link
G ANGPTL3 angiopoietin like 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:70,452,771...70,461,590
Ensembl chr20:70,449,227...70,460,469 		JBrowse link
G APLP2 amyloid beta precursor like protein 2 acts_upstream_of_or_within ISO (PMID:17920016) MGI PMID:17920016 NCBI chr 1:121,150,296...121,224,511
Ensembl chr 1:121,150,291...121,224,534 		JBrowse link
G APOA1 apolipoprotein A1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15995171)
(PMID:10357841), (PMID:15466405), (PMID:17071966), (PMID:7751823), (PMID:9327769), (PMID:9795222)		 Ensembl
TreeGrafter
MGI
UniProt		 PMID:7751823 PMID:9327769 PMID:9795222 PMID:10357841 PMID:15466405 More... GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:108,201,967...108,203,902
Ensembl chr 1:108,201,439...108,203,609 		JBrowse link
G APOA2 apolipoprotein A2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:10357838)
(PMID:10357838), (PMID:8647961)		 MGI
Ensembl		 PMID:8647961 PMID:10357838 GO_REF:0000107 NCBI chr20:2,757,939...2,760,356
Ensembl chr20:2,759,237...2,760,686 		JBrowse link
G APOA4 apolipoprotein A4 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:108,186,627...108,190,508
Ensembl chr 1:108,186,921...108,189,698 		JBrowse link
G APOA5 apolipoprotein A5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:108,154,880...108,158,998
Ensembl chr 1:108,155,641...108,157,375 		JBrowse link
G APOB apolipoprotein B involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chr14:86,624,209...86,669,175
Ensembl chr14:86,624,332...86,668,704 		JBrowse link
G APOC1 apolipoprotein C1 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 6:38,386,190...38,387,159 JBrowse link
G APOC3 apolipoprotein C3 acts_upstream_of_or_within ISO (PMID:11590213), (PMID:8089130)
(PMID:8864964)		 MGI PMID:8089130 PMID:8864964 PMID:11590213 NCBI chr 1:108,196,283...108,199,274
Ensembl chr 1:108,196,939...108,199,342 		JBrowse link
G APOE apolipoprotein E involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:1423598), (PMID:8647961) Ensembl
TreeGrafter
MGI		 PMID:1423598 PMID:8647961 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:38,377,154...38,381,219
Ensembl chr 6:38,376,887...38,381,438 		JBrowse link
G APOF apolipoprotein F acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:22363685) MGI
TreeGrafter		 PMID:22363685 GO_REF:0000118 NCBI chr11:52,316,413...52,318,956
Ensembl chr11:52,316,800...52,318,659 		JBrowse link
G APP amyloid beta precursor protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17920016) Ensembl
MGI		 PMID:17920016 GO_REF:0000107 NCBI chr 2:66,037,224...66,320,860
Ensembl chr 2:66,037,261...66,321,306 		JBrowse link
G CAT catalase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:5087482) MGI
Ensembl		 PMID:5087482 GO_REF:0000107 NCBI chr 1:30,792,533...30,828,920
Ensembl chr 1:30,792,399...30,829,592 		JBrowse link
G CEBPA CCAAT enhancer binding protein alpha acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:18974039) MGI
Ensembl		 PMID:18974039 GO_REF:0000107 NCBI chr 6:28,342,506...28,345,759
Ensembl chr 6:28,343,907...28,344,977 		JBrowse link
G CETP cholesteryl ester transfer protein involved_in IEA Ensembl
TreeGrafter
UniProt		 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:42,909,994...42,936,277
Ensembl chr 5:42,910,226...42,936,277 		JBrowse link
G CH25H cholesterol 25-hydroxylase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:9852097) MGI
Ensembl		 PMID:9852097 GO_REF:0000107 NCBI chr 9:82,632,151...82,634,101
Ensembl chr 9:82,633,004...82,633,819 		JBrowse link
G CLN6 CLN6 transmembrane ER protein involved_in ISO (PMID:16857350) UniProt PMID:16857350 NCBI chr26:15,259,186...15,278,249 JBrowse link
G CLN6 CLN6 transmembrane ER protein involved_in IEA Ensembl GO_REF:0000107 Ensembl chr26:15,266,732...15,278,418 JBrowse link
G CLN8 CLN8 transmembrane ER and ERGIC protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:1,424,402...1,445,505
Ensembl chr 8:1,433,953...1,445,021 		JBrowse link
G CYP11A1 cytochrome P450 family 11 subfamily A member 1 involved_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chr26:9,122,008...9,151,844 JBrowse link
G CYP11B1 cytochrome P450 family 11 subfamily B member 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:137,125,409...137,132,267 JBrowse link
G CYP11B1 cytochrome P450 family 11 subfamily B member 1 involved_in IEA TreeGrafter GO_REF:0000118 Ensembl chr 8:137,126,690...137,167,911 JBrowse link
G CYP11B2 cytochrome P450 family 11 subfamily B member 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:137,160,919...137,168,332
Ensembl chr 8:137,162,325...137,168,350 		JBrowse link
G CYP24A1 cytochrome P450 family 24 subfamily A member 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:9,868,794...9,889,510
Ensembl chr 2:9,868,678...9,885,884 		JBrowse link
G CYP27A1 cytochrome P450 family 27 subfamily A member 1 involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:2175615 GO_REF:0000118 RGD:1299597 NCBI chr10:104,682,437...104,723,781
Ensembl chr10:104,682,673...104,726,687 		JBrowse link
G CYP27B1 cytochrome P450 family 27 subfamily B member 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:53,675,704...53,681,372
Ensembl chr11:53,675,226...53,680,443 		JBrowse link
G CYP27C1 cytochrome P450 family 27 subfamily C member 1 involved_in IEA TreeGrafter GO_REF:0000118 Ensembl chr10:3,016,992...3,034,072 JBrowse link
G CYP51A1 cytochrome P450 family 51 subfamily A member 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr21:56,865,498...56,888,196
Ensembl chr21:56,865,312...56,886,698 		JBrowse link
G CYP7A1 cytochrome P450 family 7 subfamily A member 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 8:54,475,801...54,489,329
Ensembl chr 8:54,477,105...54,485,649 		JBrowse link
G DHCR24 24-dehydrocholesterol reductase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:16407971) MGI
Ensembl		 PMID:16407971 GO_REF:0000107 NCBI chr20:78,052,565...78,088,918
Ensembl chr20:78,052,607...78,086,303 		JBrowse link
G EBP EBP cholestenol delta-isomerase involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:45,652,398...45,660,551
Ensembl chr  X:45,653,356...45,660,291 		JBrowse link
G ERLIN1 ER lipid raft associated 1 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr 9:93,181,320...93,217,967
Ensembl chr 9:93,181,319...93,217,034 		JBrowse link
G ERLIN2 ER lipid raft associated 2 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr 8:35,771,541...35,789,848
Ensembl chr 8:35,771,580...35,789,345 		JBrowse link
G ERRFI1 ERBB receptor feedback inhibitor 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:28053990)
(PMID:22912762)		 MGI
Ensembl		 PMID:22912762 PMID:28053990 GO_REF:0000107 NCBI chr20:123,738,971...123,753,575
Ensembl chr20:123,738,973...123,755,809 		JBrowse link
G FDX1 ferredoxin 1 involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chr 1:101,777,499...101,813,753
Ensembl chr 1:101,777,678...101,816,379 		JBrowse link
G FDXR ferredoxin reductase involved_in IEA UniProt GO_REF:0000041 NCBI chr16:46,785,669...46,796,154
Ensembl chr16:46,785,591...46,796,187 		JBrowse link
G FECH ferrochelatase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11160364) Ensembl
MGI		 PMID:11160364 GO_REF:0000107 NCBI chr18:22,143,268...22,182,259
Ensembl chr18:22,143,483...22,182,416 		JBrowse link
G FGL1 fibrinogen like 1 acts_upstream_of_or_within ISO (PMID:23483972) MGI PMID:23483972 NCBI chr 8:15,962,625...16,016,118
Ensembl chr 8:15,962,053...15,982,336 		JBrowse link
G GBA1 glucosylceramidase beta 1 involved_in ISO (PMID:24211208), (PMID:26724485) UniProt PMID:24211208 PMID:26724485 NCBI chr20:8,598,110...8,631,517
Ensembl chr20:8,598,628...8,630,990 		JBrowse link
G GBA2 glucosylceramidase beta 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:44,852,048...44,865,542
Ensembl chr12:44,852,203...44,868,652 		JBrowse link
G HNF1A HNF1 homeobox A acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:11279518) MGI
Ensembl		 PMID:11279518 GO_REF:0000107 NCBI chr11:116,334,935...116,358,582
Ensembl chr11:116,335,675...116,357,751 		JBrowse link
G IL4 interleukin 4 involved_in ISO (PMID:11971948) UniProt PMID:11971948 NCBI chr23:35,492,158...35,501,349
Ensembl chr23:35,492,939...35,501,258 		JBrowse link
G INSIG1 insulin induced gene 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16100574) Ensembl
MGI
UniProt		 PMID:16100574 GO_REF:0000043 GO_REF:0000107 NCBI chr21:123,448,614...123,460,778
Ensembl chr21:123,449,106...123,460,807 		JBrowse link
G INSIG2 insulin induced gene 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16100574) Ensembl
MGI
UniProt		 PMID:16100574 GO_REF:0000043 GO_REF:0000107 NCBI chr10:12,198,390...12,219,002
Ensembl chr10:12,196,990...12,219,023 		JBrowse link
G LCAT lecithin-cholesterol acyltransferase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:10559507)
(PMID:9300780)		 MGI
UniProt
Ensembl
RGD		 PMID:746355 PMID:9300780 PMID:10559507 GO_REF:0000043 GO_REF:0000107 RGD:1581789 NCBI chr 5:59,495,936...59,500,530
Ensembl chr 5:59,497,115...59,500,448 		JBrowse link
G LDLR low density lipoprotein receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17071966) Ensembl
MGI
UniProt		 PMID:17071966 GO_REF:0000043 GO_REF:0000107 NCBI chr 6:10,062,204...10,091,780
Ensembl chr 6:10,062,790...10,091,377 		JBrowse link
G LDLRAP1 low density lipoprotein receptor adaptor protein 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr20:107,207,363...107,232,237
Ensembl chr20:107,207,334...107,229,210 		JBrowse link
G LEP leptin acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15995171) MGI
Ensembl		 PMID:15995171 GO_REF:0000107 NCBI chr21:97,056,913...97,071,161
Ensembl chr21:97,057,529...97,071,220 		JBrowse link
G LEPR leptin receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15995171) Ensembl
MGI		 PMID:15995171 GO_REF:0000107 NCBI chr20:67,454,205...67,567,524
Ensembl chr20:67,454,334...67,524,229 		JBrowse link
G LIPA lipase A, lysosomal acid type involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:30639734)
(PMID:24370824)		 Ensembl
MGI		 PMID:24370824 PMID:30639734 GO_REF:0000107 NCBI chr 9:82,639,220...82,677,479
Ensembl chr 9:82,638,621...82,677,488 		JBrowse link
G LIPC lipase C, hepatic type acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:10357838) MGI
Ensembl		 PMID:10357838 GO_REF:0000107 NCBI chr26:24,946,843...25,109,338
Ensembl chr26:24,946,673...25,087,921 		JBrowse link
G LIPE lipase E, hormone sensitive type involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr 6:36,604,822...36,630,648
Ensembl chr 6:36,605,126...36,630,376 		JBrowse link
G LOC103233018 liver carboxylesterase 1 involved_in ISO (PMID:16024911) UniProt PMID:16024911 NCBI chr 5:41,710,500...41,745,483 JBrowse link
G LOC119623630 lysosomal acid glucosylceramidase involved_in IEA Ensembl
UniProt		 GO_REF:0000041 GO_REF:0000107
G LRP1 LDL receptor related protein 1 acts_upstream_of_or_within ISO (PMID:17920016) MGI PMID:17920016 NCBI chr11:53,039,147...53,125,041
Ensembl chr11:53,039,364...53,125,776 		JBrowse link
G LRP5 LDL receptor related protein 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12509515) Ensembl
MGI		 PMID:12509515 GO_REF:0000107 NCBI chr 1:6,090,048...6,224,956
Ensembl chr 1:6,089,930...6,190,383 		JBrowse link
G NFE2L1 NFE2 like bZIP transcription factor 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr16:68,449,601...68,463,030
Ensembl chr16:68,449,898...68,461,190 		JBrowse link
G NPC1 NPC intracellular cholesterol transporter 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr18:56,956,557...57,007,951
Ensembl chr18:56,956,174...57,007,474 		JBrowse link
G NSDHL NAD(P) dependent steroid dehydrogenase-like involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10369263) Ensembl
MGI		 PMID:10369263 GO_REF:0000107 NCBI chr  X:127,342,788...127,389,117
Ensembl chr  X:127,342,850...127,390,536 		JBrowse link
G PCSK9 proprotein convertase subtilisin/kexin type 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17242417) UniProt
MGI
Ensembl		 PMID:17242417 GO_REF:0000043 GO_REF:0000107 NCBI chr20:77,893,574...77,921,076
Ensembl chr20:77,893,590...77,918,613 		JBrowse link
G PCTP phosphatidylcholine transfer protein acts_upstream_of_or_within ISO (PMID:15845870) MGI PMID:15845870 NCBI chr16:37,558,590...37,638,721
Ensembl chr16:37,614,222...37,638,120 		JBrowse link
G PIP4P1 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1 involved_in ISO (PMID:25035345) UniProt PMID:25035345 NCBI chr29:20,972,008...20,975,734 JBrowse link
G PMP22 peripheral myelin protein 22 acts_upstream_of_or_within ISO (PMID:25429154) MGI PMID:25429154 NCBI chr16:14,527,892...14,563,223
Ensembl chr16:14,527,672...14,563,171 		JBrowse link
G PON1 paraoxonase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9685159) Ensembl
MGI		 PMID:9685159 GO_REF:0000107 NCBI chr21:53,713,434...53,739,658
Ensembl chr21:53,714,012...53,739,875 		JBrowse link
G SCAP SREBF chaperone involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11358865) Ensembl
MGI
UniProt		 PMID:11358865 GO_REF:0000043 GO_REF:0000107 NCBI chr22:8,821,809...8,887,538
Ensembl chr22:8,818,980...8,850,202 		JBrowse link
G SMPD1 sphingomyelin phosphodiesterase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22383528) Ensembl
MGI		 PMID:22383528 GO_REF:0000107 NCBI chr 1:58,431,677...58,436,233
Ensembl chr 1:58,432,068...58,436,236 		JBrowse link
G SOAT1 sterol O-acyltransferase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:9756919)
(PMID:15845870)		 MGI
TreeGrafter
UniProt
Ensembl		 PMID:9756919 PMID:15845870 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chr25:49,998,197...50,061,433
Ensembl chr25:50,001,910...50,061,173 		JBrowse link
G SOAT2 sterol O-acyltransferase 2 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:9756919) RGD
TreeGrafter
MGI
UniProt
Ensembl		 PMID:9756919 PMID:12217884 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 RGD:625687 NCBI chr11:49,214,295...49,228,268
Ensembl chr11:49,215,034...49,228,244 		JBrowse link
G SQLE squalene epoxidase involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:9300786 GO_REF:0000118 RGD:1625701 NCBI chr 8:119,586,639...119,610,980
Ensembl chr 8:119,586,659...119,611,142 		JBrowse link
G SREBF1 sterol regulatory element binding transcription factor 1 involved_in ISO
IEA		 RGD
UniProt		 PMID:18071061 GO_REF:0000043 RGD:1643359 NCBI chr16:16,847,603...16,874,239
Ensembl chr16:16,845,491...16,859,554 		JBrowse link
G SREBF2 sterol regulatory element binding transcription factor 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr19:24,364,725...24,439,851
Ensembl chr19:24,364,911...24,440,014 		JBrowse link
G STAR steroidogenic acute regulatory protein involved_in IEA UniProt GO_REF:0000041 NCBI chr 8:36,164,891...36,174,424
Ensembl chr 8:36,167,694...36,174,583 		JBrowse link
G SULT1C3 sulfotransferase family 1C member 3 involved_in ISO (PMID:28992322) UniProt PMID:28992322 NCBI chr14:11,621,851...11,638,719
Ensembl chr14:11,622,043...11,636,652 		JBrowse link
G SULT2A1 sulfotransferase family 2A member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:41,160,707...41,175,382
Ensembl chr 6:41,159,978...41,175,300 		JBrowse link
G SULT2B1 sulfotransferase family 2B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:41,809,654...41,852,685
Ensembl chr 6:41,810,049...41,852,681 		JBrowse link
G TNFSF4 TNF superfamily member 4 acts_upstream_of_or_within ISO (PMID:3473481) MGI PMID:3473481 NCBI chr25:55,714,291...55,998,009
Ensembl chr25:55,974,691...55,997,374 		JBrowse link
G TSKU tsukushi, small leucine rich proteoglycan involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:67,988,729...68,003,959
Ensembl chr 1:68,001,429...68,002,490 		JBrowse link
G VLDLR very low density lipoprotein receptor involved_in IEA UniProt GO_REF:0000043 NCBI chr12:76,900,551...76,933,601
Ensembl chr12:76,899,189...76,933,584 		JBrowse link
negative regulation of cholesterol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOE apolipoprotein E involved_in ISO
IEA		 RGD
Ensembl		 PMID:9225228 GO_REF:0000107 RGD:10059686 NCBI chr 6:38,377,154...38,381,219
Ensembl chr 6:38,376,887...38,381,438 		JBrowse link
G CUNH7orf50 chromosome unknown C7orf50 homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:20,452,734...20,575,087
Ensembl chr28:20,452,748...20,575,450 		JBrowse link
G ERLIN1 ER lipid raft associated 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:93,181,320...93,217,967
Ensembl chr 9:93,181,319...93,217,034 		JBrowse link
G ERLIN2 ER lipid raft associated 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:35,771,541...35,789,848
Ensembl chr 8:35,771,580...35,789,345 		JBrowse link
G INSIG1 insulin induced gene 1 involved_in ISO (PMID:26311497) UniProt PMID:26311497 NCBI chr21:123,448,614...123,460,778
Ensembl chr21:123,449,106...123,460,807 		JBrowse link
negative regulation of cholesterol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CH25H cholesterol 25-hydroxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:82,632,151...82,634,101
Ensembl chr 9:82,633,004...82,633,819 		JBrowse link
positive regulation of cholesterol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCG1 ATP binding cassette subfamily G member 1 involved_in ISO (PMID:17916878) BHF-UCL PMID:17916878 NCBI chr 2:86,098,818...86,176,101
Ensembl chr 2:86,099,414...86,179,949 		JBrowse link
G ABCG4 ATP binding cassette subfamily G member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:110,522,773...110,537,747
Ensembl chr 1:110,524,900...110,537,735 		JBrowse link
G CYP7A1 cytochrome P450 family 7 subfamily A member 1 involved_in ISO PMID:23536474 BHF-UCL PMID:23536474 RGD:13792517 NCBI chr 8:54,475,801...54,489,329
Ensembl chr 8:54,477,105...54,485,649 		JBrowse link
G FDPS farnesyl diphosphate synthase ISO RGD PMID:18637708 RGD:2316295 NCBI chr20:8,514,311...8,526,363 JBrowse link
G FGF1 fibroblast growth factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:45,220,827...45,328,387
Ensembl chr23:45,220,800...45,328,328 		JBrowse link
G GNAI1 G protein subunit alpha i1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:68,687,809...68,770,415
Ensembl chr21:68,687,307...68,770,360 		JBrowse link
G MAPK1 mitogen-activated protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:4,246,144...4,352,648
Ensembl chr19:4,246,122...4,353,325 		JBrowse link
G MBTPS2 membrane bound transcription factor peptidase, site 2 involved_in ISO (PMID:11163209) UniProt PMID:11163209 NCBI chr  X:20,319,731...20,364,603
Ensembl chr  X:20,319,807...20,361,847 		JBrowse link
G NPY1R neuropeptide Y receptor Y1 ISO RGD PMID:32976883 RGD:405096663 NCBI chr 7:109,774,700...109,794,543
Ensembl chr 7:109,774,918...109,776,905 		JBrowse link
G PAQR3 progestin and adipoQ receptor family member 3 involved_in ISO (PMID:26311497) UniProt PMID:26311497 NCBI chr 7:27,358,443...27,385,612
Ensembl chr 7:27,367,059...27,385,568 		JBrowse link
G PRKACA protein kinase cAMP-activated catalytic subunit alpha involved_in ISO (PMID:38503280) UniProt PMID:38503280 NCBI chr 6:12,743,752...12,759,155 JBrowse link
G PRKACA protein kinase cAMP-activated catalytic subunit alpha involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 6:12,727,643...12,758,915 JBrowse link
G QKI QKI, KH domain containing RNA binding involved_in ISO (PMID:33942715) UniProt PMID:33942715 NCBI chr13:91,045,167...91,206,190
Ensembl chr13:91,045,209...91,208,471 		JBrowse link
G SCAP SREBF chaperone involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:8,821,809...8,887,538
Ensembl chr22:8,818,980...8,850,202 		JBrowse link
G SCP2 sterol carrier protein 2 ISO RGD PMID:2554812 RGD:9850260 NCBI chr20:79,868,825...79,993,906
Ensembl chr20:79,865,332...79,993,835 		JBrowse link
G SEC14L2 SEC14 like lipid binding 2 ISO RGD PMID:11226224 RGD:727312 NCBI chr19:13,276,712...13,302,737
Ensembl chr19:13,276,913...13,305,003 		JBrowse link
G SREBF1 sterol regulatory element binding transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16046411)
(PMID:9329978)		 Ensembl
MGI		 PMID:9329978 PMID:16046411 GO_REF:0000107 NCBI chr16:16,847,603...16,874,239
Ensembl chr16:16,845,491...16,859,554 		JBrowse link
G SREBF2 sterol regulatory element binding transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:24,364,725...24,439,851
Ensembl chr19:24,364,911...24,440,014 		JBrowse link
positive regulation of cholesterol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA1 apolipoprotein A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:108,201,967...108,203,902
Ensembl chr 1:108,201,439...108,203,609 		JBrowse link
G APOE apolipoprotein E involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:38,377,154...38,381,219
Ensembl chr 6:38,376,887...38,381,438 		JBrowse link
G LOC103233018 liver carboxylesterase 1 involved_in ISO (PMID:16971496) UniProt PMID:16971496 NCBI chr 5:41,710,500...41,745,483 JBrowse link
G STARD4 StAR related lipid transfer domain containing 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:14,842,152...14,854,675
Ensembl chr23:14,842,286...14,854,702 		JBrowse link
regulation of cholesterol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA2 ATP binding cassette subfamily A member 2 NOT|involved_in ISO (PMID:21810484) ARUK-UCL PMID:21810484 NCBI chr12:1,161,340...1,183,807
Ensembl chr12:1,162,865...1,183,113 		JBrowse link
G APOB apolipoprotein B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16455790) Ensembl
MGI		 PMID:16455790 GO_REF:0000107 NCBI chr14:86,624,209...86,669,175
Ensembl chr14:86,624,332...86,668,704 		JBrowse link
G AQP8 aquaporin 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:22,928,230...22,940,814
Ensembl chr 5:22,928,350...22,940,856 		JBrowse link
G DHCR7 7-dehydrocholesterol reductase ISO RGD PMID:10329655 RGD:632010 NCBI chr 1:3,243,263...3,257,332
Ensembl chr 1:3,243,313...3,257,487 		JBrowse link
G ERLIN1 ER lipid raft associated 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:93,181,320...93,217,967
Ensembl chr 9:93,181,319...93,217,034 		JBrowse link
G ERLIN2 ER lipid raft associated 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:35,771,541...35,789,848
Ensembl chr 8:35,771,580...35,789,345 		JBrowse link
G GPR146 G protein-coupled receptor 146 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:20,522,155...20,538,402
Ensembl chr28:20,522,899...20,523,900 		JBrowse link
G LPCAT3 lysophosphatidylcholine acyltransferase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:7,009,911...7,051,391
Ensembl chr11:7,005,701...7,051,605 		JBrowse link
G PEX2 peroxisomal biogenesis factor 2 acts_upstream_of_or_within ISO (PMID:14673138) MGI PMID:14673138 NCBI chr 8:72,513,975...72,532,399
Ensembl chr 8:72,514,307...72,517,003 		JBrowse link
G SCAP SREBF chaperone involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16054043) Ensembl
TreeGrafter
MGI		 PMID:16054043 GO_REF:0000107 GO_REF:0000118 NCBI chr22:8,821,809...8,887,538
Ensembl chr22:8,818,980...8,850,202 		JBrowse link
regulation of cholesterol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCG1 ATP binding cassette subfamily G member 1 involved_in ISO (PMID:16556852) BHF-UCL PMID:16556852 NCBI chr 2:86,098,818...86,176,101
Ensembl chr 2:86,099,414...86,179,949 		JBrowse link
G ACADL acyl-CoA dehydrogenase long chain involved_in ISO (PMID:15639194) BHF-UCL PMID:15639194 NCBI chr10:95,886,502...95,925,928
Ensembl chr10:95,887,465...95,925,578 		JBrowse link
G ACADVL acyl-CoA dehydrogenase very long chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:6,593,288...6,598,980
Ensembl chr16:6,593,287...6,598,979 		JBrowse link
G APOE apolipoprotein E involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:38,377,154...38,381,219
Ensembl chr 6:38,376,887...38,381,438 		JBrowse link
G ARV1 ARV1 homolog, fatty acid homeostasis modulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20663892) Ensembl
MGI		 PMID:20663892 GO_REF:0000107 NCBI chr25:68,251,110...68,271,530
Ensembl chr25:68,251,130...68,271,607 		JBrowse link
G DGAT2 diacylglycerol O-acyltransferase 2 ISO RGD PMID:17526931 RGD:10400884 NCBI chr 1:66,985,413...67,018,058
Ensembl chr 1:66,985,466...67,021,182 		JBrowse link
G DGKQ diacylglycerol kinase theta involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:47,804,904...47,819,291
Ensembl chr27:47,805,017...47,817,583 		JBrowse link
G EPHX2 epoxide hydrolase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:25,603,668...25,659,232
Ensembl chr 8:25,603,735...25,659,345 		JBrowse link
G FMO5 flavin containing dimethylaniline monoxygenase 5 involved_in IEA Ensembl GO_REF:0000107
G GNB3 G protein subunit beta 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:6,873,043...6,880,676
Ensembl chr11:6,874,351...6,880,179 		JBrowse link
G LDLR low density lipoprotein receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:10,062,204...10,091,780
Ensembl chr 6:10,062,790...10,091,377 		JBrowse link
G LMF1 lipase maturation factor 1 acts_upstream_of_or_within ISO (PMID:6857276) MGI PMID:6857276 NCBI chr 5:761,788...857,798
Ensembl chr 5:762,697...866,926 		JBrowse link
G LOC119623289 diacylglycerol kinase theta involved_in IEA Ensembl GO_REF:0000107
G SERPINA12 serpin family A member 12 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22837305) Ensembl
MGI		 PMID:22837305 GO_REF:0000107 NCBI chr24:72,273,041...72,285,367
Ensembl chr24:72,273,186...72,285,157 		JBrowse link
G THRB thyroid hormone receptor beta ISO RGD PMID:17878314 RGD:2315101 NCBI chr15:68,797,410...69,161,256
Ensembl chr15:68,802,078...68,902,292 		JBrowse link
G TTC39B tetratricopeptide repeat domain 39B involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr12:64,315,240...64,452,161
Ensembl chr12:64,372,763...64,450,973 		JBrowse link
sterol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CH25H cholesterol 25-hydroxylase involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:82,632,151...82,634,101
Ensembl chr 9:82,633,004...82,633,819 		JBrowse link
G DHCR7 7-dehydrocholesterol reductase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15005800) InterPro
MGI		 PMID:15005800 GO_REF:0000002 NCBI chr 1:3,243,263...3,257,332
Ensembl chr 1:3,243,313...3,257,487 		JBrowse link
G EBP EBP cholestenol delta-isomerase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10391218) UniProt
Ensembl
MGI		 PMID:10391218 GO_REF:0000043 GO_REF:0000107 NCBI chr  X:45,652,398...45,660,551
Ensembl chr  X:45,653,356...45,660,291 		JBrowse link
G ERG28 ergosterol biosynthesis 28 homolog involved_in IEA UniProt GO_REF:0000043 NCBI chr24:52,895,060...52,905,265
Ensembl chr24:52,894,420...52,905,224 		JBrowse link
G HMGCR 3-hydroxy-3-methylglutaryl-CoA reductase involved_in IEA UniProt
TreeGrafter		 GO_REF:0000043 GO_REF:0000118 NCBI chr 4:69,664,784...69,690,343
Ensembl chr 4:69,665,417...69,688,686 		JBrowse link
G INSIG1 insulin induced gene 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16955138) Ensembl
MGI		 PMID:16955138 GO_REF:0000107 NCBI chr21:123,448,614...123,460,778
Ensembl chr21:123,449,106...123,460,807 		JBrowse link
G INSIG2 insulin induced gene 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16955138) Ensembl
MGI		 PMID:16955138 GO_REF:0000107 NCBI chr10:12,198,390...12,219,002
Ensembl chr10:12,196,990...12,219,023 		JBrowse link
G LBR lamin B receptor involved_in IEA InterPro GO_REF:0000002 NCBI chr25:4,326,872...4,353,208
Ensembl chr25:4,330,849...4,351,401 		JBrowse link
G MSMO1 methylsterol monooxygenase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:111,688,591...111,704,765
Ensembl chr 7:111,688,604...111,704,849 		JBrowse link
G PMVK phosphomevalonate kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:8,893,297...8,906,882
Ensembl chr20:8,894,786...8,906,873 		JBrowse link
G SC5D sterol-C5-desaturase involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:112,706,511...112,720,860
Ensembl chr 1:112,706,545...112,719,722 		JBrowse link
G SQLE squalene epoxidase involved_in IEA UniProt
Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:119,586,639...119,610,980
Ensembl chr 8:119,586,659...119,611,142 		JBrowse link
G TM7SF2 transmembrane 7 superfamily member 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:9,112,528...9,117,201
Ensembl chr 1:9,112,710...9,116,898 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17043
    cellular process 16562
      metabolic process 10934
        organic hydroxy compound metabolic process 547
          sterol metabolic process 146
            cholesterol metabolic process + 139
            ecdysone metabolic process + 0
            ergosterol metabolic process + 0
            sterol biosynthetic process + 60
            sterol catabolic process + 8
            zymosterol metabolic process + 0
Path 2
Term Annotations click to browse term
  biological_process 17043
    cellular process 16562
      metabolic process 10934
        primary metabolic process 9703
          lipid metabolic process 1329
            steroid metabolic process 304
              sterol metabolic process 146
                cholesterol metabolic process + 139
                ecdysone metabolic process + 0
                ergosterol metabolic process + 0
                sterol biosynthetic process + 60
                sterol catabolic process + 8
                zymosterol metabolic process + 0
paths to the root