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ONTOLOGY REPORT - ANNOTATIONS

Term:xanthophyll metabolic process
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Accession:GO:0016122 term browser browse the term
Definition:The chemical reactions and pathways involving xanthophylls, oxygen-containing carotenoids.
Synonyms:exact_synonym: xanthophyll metabolism


show annotations for term's descendants           Sort by:
xanthophyll metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bco2 beta-carotene oxygenase 2 acts_upstream_of_or_within ISO
IEA 		MGI:4840382 (PMID:25701869)
GO_REF:0000107 		RGD
Ensembl		 PMID:25701869 GO_REF:0000107 NCBI chr 8:50,882,174...50,907,676
Ensembl chr 8:50,882,181...50,915,467 		JBrowse link
xanthophyll catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bco2 beta-carotene oxygenase 2 involved_in ISO
IEA 		(PMID:21106934)
GO_REF:0000107 		RGD
Ensembl		 PMID:21106934 GO_REF:0000107 NCBI chr 8:50,882,174...50,907,676
Ensembl chr 8:50,882,181...50,915,467 		JBrowse link
zeaxanthin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rpe65 retinoid isomerohydrolase RPE65 involved_in ISO
ISS
IBA
IEA 		(PMID:28874556)
GO_REF:0000024
GO_REF:0000033
GO_REF:0000107 		RGD
UniProt
GO_Central
Ensembl		 PMID:28874556 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:251,425,228...251,457,209
Ensembl chr 2:248,766,612...248,798,403 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20543
    cellular process 19534
      metabolic process 12158
        primary metabolic process 10727
          lipid metabolic process 1485
            isoprenoid metabolic process 143
              terpenoid metabolic process 107
                tetraterpenoid metabolic process 3
                  carotenoid metabolic process 3
                    xanthophyll metabolic process 2
                      all-trans-neoxanthin metabolic process + 0
                      astaxanthin metabolic process + 0
                      capsanthin metabolic process + 0
                      capsorubin metabolic process + 0
                      lutein metabolic process + 0
                      spheroidene metabolic process + 0
                      xanthophyll biosynthetic process + 1
                      xanthophyll catabolic process + 1
                      xanthophyll cycle 0
                      zeaxanthin metabolic process + 1
paths to the root