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ONTOLOGY REPORT - ANNOTATIONS

Term:polyprenol metabolic process
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Accession:GO:0016093 term browser browse the term
Definition:The chemical reactions and pathways involving polyprenols, prenols with more than 4 isoprenoid residues, which may be all-trans, or a mixture of cis and trans.
Synonyms:exact_synonym: polyprenol metabolism


show annotations for term's descendants           Sort by:
dolichol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat2 acetyl-CoA acetyltransferase 2 involved_in TAS PMID:10806397 UniProt PMID:10806397 RGD:2326086 NCBI chr 1:50,100,840...50,118,886 JBrowse link
G Dhdds dehydrodolichyl diphosphate synthase subunit involved_in ISO (PMID:28842490) RGD PMID:28842490 NCBI chr 5:146,198,359...146,224,479 JBrowse link
G Dhrsx dehydrogenase/reductase X-linked involved_in ISO (PMID:38821050) RGD PMID:38821050 NCBI chr12:16,299,768...16,304,553 JBrowse link
G Nus1 NUS1 dehydrodolichyl diphosphate synthase subunit acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:25066056)
GO_REF:0000033		 RGD
GO_Central		 PMID:25066056 GO_REF:0000033 NCBI chr20:31,811,817...31,838,562 JBrowse link
G Srd5a3 steroid 5 alpha-reductase 3 involved_in ISO
IEA
ISS
IBA		 (PMID:38821050)
GO_REF:0000107
GO_REF:0000024
GO_REF:0000033		 RGD
Ensembl
UniProt
GO_Central		 PMID:38821050 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr14:32,046,408...32,060,796 JBrowse link
dolichol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dolk dolichol kinase involved_in ISO UniProtKB:P20048 (PMID:12213788) RGD PMID:12213788 NCBI chr 3:33,955,642...33,957,680 JBrowse link
G Dpm1 dolichyl-phosphate mannosyltransferase subunit 1, catalytic acts_upstream_of_or_within
involved_in		 IDA
ISO		 (PMID:9535917)
(PMID:10835346)
(PMID:9535917), (PMID:9724629)		 RGD PMID:9535917 PMID:9724629 PMID:10835346 PMID:2844175 RGD:1601442 NCBI chr 3:156,919,979...156,939,522 JBrowse link
G Dpm2 dolichyl-phosphate mannosyltransferase subunit 2, regulatory acts_upstream_of_or_within
involved_in		 IDA
ISO
IEA		 PMID:9724629
(PMID:10835346)
GO_REF:0000104		 RGD
UniProt		 PMID:10835346 PMID:9724629 GO_REF:0000104, RGD:69827 NCBI chr 3:15,855,952...15,858,867 JBrowse link
G Dpm3 dolichyl-phosphate mannosyltransferase subunit 3, regulatory involved_in ISO (PMID:10835346) RGD PMID:10835346 NCBI chr 2:174,676,532...174,677,047 JBrowse link
G Srd5a3 steroid 5 alpha-reductase 3 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:20637498)
GO_REF:0000104		 UniProt
RGD		 PMID:20637498 GO_REF:0000024 GO_REF:0000104 NCBI chr14:32,046,408...32,060,796 JBrowse link
farnesol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1b10 aldo-keto reductase family 1 member B10 involved_in ISO (PMID:21187079) RGD PMID:21187079 NCBI chr 4:64,005,632...64,027,860 JBrowse link
G Akr1c3 aldo-keto reductase family 1, member C3 involved_in ISO (PMID:21187079) RGD PMID:21187079 NCBI chr17:71,020,884...71,037,779 JBrowse link
polyprenol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhdds dehydrodolichyl diphosphate synthase subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:146,198,359...146,224,479 JBrowse link
polyprenol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Srd5a3 steroid 5 alpha-reductase 3 involved_in ISO
ISS
IEA		 (PMID:20637498)
GO_REF:0000024
GO_REF:0000104		 RGD
UniProt		 PMID:20637498 GO_REF:0000024 GO_REF:0000104 NCBI chr14:32,046,408...32,060,796 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20534
    cellular process 19523
      metabolic process 12157
        small molecule metabolic process 1918
          alcohol metabolic process 397
            polyprenol metabolic process 11
              dolichol metabolic process + 9
              farnesol metabolic process + 2
              geraniol metabolic process + 0
              polyprenol biosynthetic process + 5
              polyprenol catabolic process + 3
Path 2
Term Annotations click to browse term
  biological_process 20534
    cellular process 19523
      metabolic process 12157
        primary metabolic process 10741
          lipid metabolic process 1458
            isoprenoid metabolic process 138
              polyprenol metabolic process 11
                dolichol metabolic process + 9
                farnesol metabolic process + 2
                geraniol metabolic process + 0
                polyprenol biosynthetic process + 5
                polyprenol catabolic process + 3
paths to the root