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ONTOLOGY REPORT - ANNOTATIONS

Term:organic acid catabolic process
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Accession:GO:0016054 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of organic acids, any acidic compound containing carbon in covalent linkage.
Synonyms:exact_synonym: organic acid breakdown;   organic acid catabolism;   organic acid degradation


show annotations for term's descendants           Sort by:
10-formyltetrahydrofolate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aasdhppt aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase acts_upstream_of_positive_effect ISO
IEA		 (PMID:19933275), (PMID:21238436)
GO_REF:0000107		 RGD
Ensembl		 PMID:19933275 PMID:21238436 GO_REF:0000107 NCBI chr 8:1,453,226...1,463,990
Ensembl chr 8:1,452,282...1,463,966 		JBrowse link
G Aldh1l1 aldehyde dehydrogenase 1 family, member L1 involved_in ISO
IEA
IMP
IDA		 (PMID:19933275)
GO_REF:0000107
GO_REF:0000002
GO_REF:0000104
(PMID:31624291)
GO_REF:0000117
PMID:10585460
PMID:1848231		 RGD
Ensembl
InterPro
UniProt		 PMID:19933275 PMID:31624291 PMID:10585460 PMID:1848231 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000117, RGD:150521656, RGD:632027 NCBI chr 4:123,059,989...123,106,471
Ensembl chr 4:123,060,008...123,106,465 		JBrowse link
G Aldh1l2 aldehyde dehydrogenase 1 family, member L2 involved_in ISO
IEA		 (PMID:21238436)
GO_REF:0000107
GO_REF:0000117
GO_REF:0000002
GO_REF:0000104
(PMID:33168096)		 RGD
Ensembl
UniProt
InterPro		 PMID:21238436 PMID:33168096 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000117 NCBI chr 7:20,254,246...20,305,793
Ensembl chr 7:20,254,233...20,305,776 		JBrowse link
2-oxobutyrate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phyh phytanoyl-CoA 2-hydroxylase IDA RGD PMID:10588950 RGD:727286 NCBI chr17:78,238,747...78,255,645
Ensembl chr17:73,329,082...73,346,409 		JBrowse link
4-hydroxyproline catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoga1 4-hydroxy-2-oxoglutarate aldolase 1 involved_in ISO
IEA		 (PMID:21998747)
GO_REF:0000107		 RGD
Ensembl		 PMID:21998747 GO_REF:0000107 NCBI chr 1:250,806,430...250,833,544
Ensembl chr 1:240,857,126...240,884,568 		JBrowse link
arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddah1 dimethylarginine dimethylaminohydrolase 1 involved_in ISO
IEA		 (PMID:24895913)
GO_REF:0000107		 RGD
Ensembl		 PMID:24895913 GO_REF:0000107 NCBI chr 2:237,327,812...237,460,624
Ensembl chr 2:234,667,491...234,799,339 		JBrowse link
G Fah fumarylacetoacetate hydrolase acts_upstream_of_or_within ISO
IEA		 MGI:2155424|MGI:2155425 (PMID:11209059)
GO_REF:0000107		 RGD
Ensembl		 PMID:11209059 GO_REF:0000107 NCBI chr 1:138,548,830...138,571,599
Ensembl chr 1:138,548,834...138,571,505 		JBrowse link
G Nos1 nitric oxide synthase 1 involved_in IDA
IBA		 PMID:1383204
GO_REF:0000033		 GO_Central PMID:1383204 GO_REF:0000033, RGD:8553334 NCBI chr12:44,276,011...44,456,371
Ensembl chr12:38,626,714...38,710,945 		JBrowse link
G Nos2 nitric oxide synthase 2 involved_in ISO
IBA		 (PMID:7504305)
(PMID:1383204)
GO_REF:0000033		 RGD
GO_Central		 PMID:1383204 PMID:7504305 GO_REF:0000033 NCBI chr10:64,313,335...64,349,221
Ensembl chr10:63,815,308...63,851,210 		JBrowse link
G Nos3 nitric oxide synthase 3 involved_in ISO
IBA
IEA		 (PMID:1378832), (PMID:7488039)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:1378832 PMID:7488039 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:11,686,088...11,706,604
Ensembl chr 4:10,793,834...10,814,166 		JBrowse link
arginine catabolic process to glutamate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Oat ornithine aminotransferase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:196,777,973...196,797,754
Ensembl chr 1:187,347,865...187,367,682 		JBrowse link
arginine catabolic process to ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg1 arginase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:22,295,093...22,307,720
Ensembl chr 1:20,475,968...20,488,422 		JBrowse link
G Arg2 arginase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:103,669,001...103,694,375
Ensembl chr 6:97,936,002...97,961,378 		JBrowse link
arginine catabolic process to proline via ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Oat ornithine aminotransferase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:196,777,973...196,797,754
Ensembl chr 1:187,347,865...187,367,682 		JBrowse link
arginine deiminase pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Padi3 peptidyl arginine deiminase 3 NAS RGD PMID:9192727 RGD:69926 NCBI chr 5:153,089,717...153,117,146
Ensembl chr 5:153,089,717...153,117,146 		JBrowse link
aromatic amino acid family catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tat tyrosine aminotransferase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr19:54,856,604...54,867,168
Ensembl chr19:37,947,112...37,958,031 		JBrowse link
asparagine catabolic process via L-aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asrgl1 asparaginase and isoaspartyl peptidase 1 involved_in
acts_upstream_of_or_within		 ISO
IBA
IDA		 (PMID:19839645)
GO_REF:0000033
PMID:12753071		 RGD
GO_Central		 PMID:19839645 PMID:12753071 PMID:12753071 GO_REF:0000033, RGD:1299508, RGD:1299508 NCBI chr 1:206,006,103...206,027,115
Ensembl chr 1:206,006,109...206,027,108 		JBrowse link
aspartate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddo D-aspartate oxidase involved_in ISO (PMID:9163533) RGD PMID:9163533 NCBI chr20:44,090,823...44,109,962
Ensembl chr20:44,090,914...44,133,095 		JBrowse link
G ENSRNOG00000064101 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 3:9,679,203...9,680,482 JBrowse link
G Got1 glutamic-oxaloacetic transaminase 1 involved_in ISO
IEA		 (PMID:2241899)
GO_REF:0000107		 RGD
Ensembl		 PMID:2241899 GO_REF:0000107 NCBI chr 1:252,306,541...252,337,622
Ensembl chr 1:242,357,306...242,380,633 		JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 involved_in ISO
IBA		 (PMID:2567216)
GO_REF:0000033		 RGD
GO_Central		 PMID:2567216 GO_REF:0000033 NCBI chr19:9,180,428...9,206,113
Ensembl chr19:9,174,311...9,199,994 		JBrowse link
G Got2-ps6 glutamic-oxaloacetic transaminase 2, pseudogene 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:60,551,686...60,552,959
Ensembl chr  X:60,551,686...60,552,959 		JBrowse link
beta-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh6a1 aldehyde dehydrogenase 6 family, member A1 IDA RGD PMID:2768248 RGD:1599052 NCBI chr 6:109,809,092...109,829,725
Ensembl chr 6:104,077,979...104,098,656 		JBrowse link
bile acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1d1 aldo-keto reductase family 1, member D1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:67,121,288...67,154,543
Ensembl chr 4:66,154,248...66,186,372 		JBrowse link
branched-chain amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Auh AU RNA binding methylglutaconyl-CoA hydratase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:12,481,396...12,576,748
Ensembl chr17:12,329,524...12,424,896 		JBrowse link
G Bcat1 branched chain amino acid transaminase 1 acts_upstream_of_or_within ISO (PMID:14755340) RGD PMID:14755340 NCBI chr 4:179,695,662...179,777,973
Ensembl chr 4:177,964,834...178,046,597 		JBrowse link
G Bcat2 branched chain amino acid transaminase 2 acts_upstream_of_or_within IDA
IEA
ISO		 GO_REF:0000107
MGI:3028726 (PMID:14755340)		 Ensembl
RGD		 PMID:14755340 PMID:11733007 GO_REF:0000107, RGD:1582175 NCBI chr 1:105,175,157...105,196,474
Ensembl chr 1:96,042,625...96,060,007 		JBrowse link
G Bckdha branched chain keto acid dehydrogenase E1 subunit alpha involved_in TAS
IBA
ISO
ISS		 GO_REF:0000033
(PMID:10745006), (PMID:3593587), (PMID:7883996), (PMID:9582350)
GO_REF:0000024		 GO_Central
RGD
HGNC-UCL		 PMID:3593587 PMID:7883996 PMID:9582350 PMID:10745006 PMID:2822716 GO_REF:0000024 GO_REF:0000033, RGD:631719 NCBI chr 1:90,266,731...90,295,521
Ensembl chr 1:81,138,947...81,167,862 		JBrowse link
G Bckdhb branched chain keto acid dehydrogenase E1 subunit beta involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:10745006), (PMID:2022752), (PMID:3593587)		 UniProt
GO_Central
RGD		 PMID:2022752 PMID:3593587 PMID:10745006 GO_REF:0000024 GO_REF:0000033 NCBI chr 8:93,725,277...93,907,799
Ensembl chr 8:84,845,264...85,027,812 		JBrowse link
G Bckdk branched chain ketoacid dehydrogenase kinase involved_in TAS
IDA		 PMID:1377677 RGD
HGNC-UCL		 PMID:11562470 PMID:1377677 RGD:68918, RGD:68712 NCBI chr 1:191,945,809...191,950,480
Ensembl chr 1:182,515,327...182,536,633 		JBrowse link
G Dbt dihydrolipoamide branched chain transacylase E2 involved_in ISO
IEA		 (PMID:3593587)
GO_REF:0000107		 RGD
Ensembl		 PMID:3593587 GO_REF:0000107 NCBI chr 2:207,166,660...207,195,528
Ensembl chr 2:204,481,737...204,510,609 		JBrowse link
G Dld dihydrolipoamide dehydrogenase involved_in ISO
IEA		 (PMID:3593587)
GO_REF:0000107		 RGD
Ensembl		 PMID:3593587 GO_REF:0000107 NCBI chr 6:53,631,686...53,655,059
Ensembl chr 6:47,903,914...47,924,795 		JBrowse link
G Hibadh 3-hydroxyisobutyrate dehydrogenase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:82,979,759...83,077,819
Ensembl chr 4:81,649,175...81,780,617 		JBrowse link
G Hibch 3-hydroxyisobutyryl-CoA hydrolase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:56,082,082...56,161,796
Ensembl chr 9:48,590,099...48,669,824 		JBrowse link
G Ivd isovaleryl-CoA dehydrogenase involved_in ISO (PMID:7640268) RGD PMID:7640268 NCBI chr 3:126,305,584...126,326,016
Ensembl chr 3:105,851,683...105,872,575 		JBrowse link
G Ppm1k protein phosphatase, Mg2+/Mn2+ dependent, 1K involved_in ISO (PMID:29779826) RGD PMID:29779826 NCBI chr 4:88,942,226...88,969,139
Ensembl chr 4:87,612,204...87,636,152 		JBrowse link
G Slc25a44 solute carrier family 25, member 44 involved_in ISO
IEA		 (PMID:31435015)
GO_REF:0000002
GO_REF:0000107		 RGD
InterPro
Ensembl		 PMID:31435015 GO_REF:0000002 GO_REF:0000107 NCBI chr 2:173,868,317...173,883,137
Ensembl chr 2:173,868,320...173,883,020 		JBrowse link
butyrate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acads acyl-CoA dehydrogenase short chain involved_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:3968063 GO_REF:0000033, RGD:2317678 NCBI chr12:47,154,259...47,163,580
Ensembl chr12:41,493,626...41,502,898 		JBrowse link
butyryl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt19 nudix hydrolase 19 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:29378847)		 UniProt
Ensembl
RGD		 PMID:29378847 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:88,214,475...88,226,072
Ensembl chr 1:88,214,480...88,226,207 		JBrowse link
G Nudt7 nudix hydrolase 7 involved_in ISO (PMID:18799520), (PMID:29378847) RGD PMID:18799520 PMID:29378847 NCBI chr19:59,034,808...59,049,148
Ensembl chr19:42,125,711...42,151,081 		JBrowse link
G Nudt8 nudix hydrolase 8 involved_in ISO (PMID:31004344) RGD PMID:31004344 NCBI chr 1:210,723,209...210,724,717
Ensembl chr 1:201,292,619...201,295,224 		JBrowse link
carboxylic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acad8 acyl-CoA dehydrogenase family, member 8 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 8:33,641,420...33,665,542
Ensembl chr 8:25,382,273...25,406,414 		JBrowse link
G Acad9 acyl-CoA dehydrogenase family, member 9 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 2:120,871,329...120,894,306
Ensembl chr 2:118,943,174...118,966,547 		JBrowse link
G Acadl acyl-CoA dehydrogenase, long chain involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 9:75,783,689...75,822,077
Ensembl chr 9:68,333,980...68,372,220 		JBrowse link
G Acadm acyl-CoA dehydrogenase medium chain involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 2:245,518,693...245,542,864
Ensembl chr 2:242,858,865...242,883,147 		JBrowse link
G Acads acyl-CoA dehydrogenase short chain involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr12:47,154,259...47,163,580
Ensembl chr12:41,493,626...41,502,898 		JBrowse link
G Acadsb acyl-CoA dehydrogenase, short/branched chain involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 1:195,619,088...195,660,564
Ensembl chr 1:186,188,987...186,230,379 		JBrowse link
G Acadvl acyl-CoA dehydrogenase, very long chain involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr10:55,231,558...55,236,786
Ensembl chr10:54,732,469...54,738,075 		JBrowse link
G Gcdh glutaryl-CoA dehydrogenase involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr19:40,168,038...40,174,536
Ensembl chr19:23,263,264...23,269,681 		JBrowse link
G Ivd isovaleryl-CoA dehydrogenase involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 3:126,305,584...126,326,016
Ensembl chr 3:105,851,683...105,872,575 		JBrowse link
G Naalad2 N-acetylated alpha-linked acidic dipeptidase 2 involved_in ISO
IEA		 (PMID:21908619)
GO_REF:0000107		 RGD
Ensembl		 PMID:21908619 GO_REF:0000107 NCBI chr 8:15,406,119...15,479,714
Ensembl chr 8:15,407,043...15,479,714 		JBrowse link
G Pon1 paraoxonase 1 involved_in ISO
IEA		 (PMID:7638166)
GO_REF:0000107		 RGD
Ensembl		 PMID:7638166 GO_REF:0000107 NCBI chr 4:34,261,312...34,292,327
Ensembl chr 4:33,294,722...33,321,360 		JBrowse link
G Pon3 paraoxonase 3 involved_in ISO
IEA		 (PMID:15772423)
GO_REF:0000107		 RGD
Ensembl		 PMID:15772423 GO_REF:0000107 NCBI chr 4:34,323,546...34,350,244
Ensembl chr 4:33,349,168...33,383,855 		JBrowse link
D-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino-acid oxidase involved_in ISO
IEA
IBA		 (PMID:16616139), (PMID:20603179)
GO_REF:0000107
(PMID:20603179)
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:16616139 PMID:20603179 GO_REF:0000033 GO_REF:0000107 NCBI chr12:48,252,900...48,275,964
Ensembl chr12:42,592,343...42,612,741 		JBrowse link
D-amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino-acid oxidase involved_in ISO
IEA		 (PMID:29274788)
GO_REF:0000107
(PMID:16751595), (PMID:2572224)		 RGD
Ensembl		 PMID:2572224 PMID:16751595 PMID:29274788 GO_REF:0000107 NCBI chr12:48,252,900...48,275,964
Ensembl chr12:42,592,343...42,612,741 		JBrowse link
G Ddo D-aspartate oxidase involved_in IDA
IEA
ISO
IBA		 PMID:25747990
GO_REF:0000107
(PMID:20603179), (PMID:25747990), (PMID:26058797), (PMID:32553892), (PMID:37189369)
GO_REF:0000033
GO_REF:0000117
(PMID:16751595), (PMID:17234685)
(PMID:20603179), (PMID:25747990), (PMID:28629864)
(PMID:33650155)
PMID:29292239		 Ensembl
RGD
GO_Central
UniProt		 PMID:16751595 PMID:17234685 PMID:20603179 PMID:25747990 PMID:26058797 More... GO_REF:0000033 GO_REF:0000107 GO_REF:0000117, RGD:401901226, RGD:401901239 NCBI chr20:44,090,823...44,109,962
Ensembl chr20:44,090,914...44,133,095 		JBrowse link
D-glucuronate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1a1 aldo-keto reductase family 1 member A1 involved_in
acts_upstream_of_or_within		 IMP
IEA
ISO		 PMID:22820017
GO_REF:0000107
(PMID:15769935)		 Ensembl
RGD		 PMID:15769935 PMID:22820017 GO_REF:0000107, RGD:13825440 NCBI chr 5:135,329,605...135,367,037
Ensembl chr 5:130,092,732...130,113,674 		JBrowse link
D-glucuronate catabolic process to D-xylulose 5-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1a1 aldo-keto reductase family 1 member A1 involved_in ISO
IEA		 (PMID:38160)
GO_REF:0000107		 RGD
Ensembl		 PMID:38160 GO_REF:0000107 NCBI chr 5:135,329,605...135,367,037
Ensembl chr 5:130,092,732...130,113,674 		JBrowse link
G Cryl1 crystallin, lambda 1 involved_in ISO (PMID:38160) RGD PMID:38160 NCBI chr15:31,427,011...31,545,997
Ensembl chr15:31,427,054...31,545,997 		JBrowse link
G Dcxr dicarbonyl and L-xylulose reductase involved_in ISO (PMID:11882650) RGD PMID:11882650 NCBI chr10:106,504,730...106,506,619 JBrowse link
G Sord sorbitol dehydrogenase involved_in IEA
ISO		 GO_REF:0000107
(PMID:38160)		 Ensembl
RGD		 PMID:38160 GO_REF:0000107 NCBI chr 3:129,638,282...129,669,727
Ensembl chr 3:109,184,676...109,216,133 		JBrowse link
D-serine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino-acid oxidase involved_in ISO
IEA
IBA		 (PMID:18544534)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:18544534 GO_REF:0000033 GO_REF:0000107 NCBI chr12:48,252,900...48,275,964
Ensembl chr12:42,592,343...42,612,741 		JBrowse link
dicarboxylic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acot4 acyl-CoA thioesterase 4 involved_in ISO
IEA		 (PMID:16141203)
GO_REF:0000107		 RGD
Ensembl		 PMID:16141203 GO_REF:0000107 NCBI chr 6:109,399,032...109,405,138
Ensembl chr 6:103,668,753...103,673,917 		JBrowse link
G Acot8 acyl-CoA thioesterase 8 involved_in IEA
ISO		 GO_REF:0000107
(PMID:16141203)		 Ensembl
RGD		 PMID:16141203 GO_REF:0000107 NCBI chr 3:173,950,530...173,962,188
Ensembl chr 3:153,531,193...153,542,851 		JBrowse link
fatty acid alpha-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hacl1 2-hydroxyacyl-CoA lyase 1 involved_in IDA
ISO
IBA
IEA		 PMID:10468558
(PMID:28629946)
GO_REF:0000033
GO_REF:0000107
(PMID:10468558), (PMID:15644336), (PMID:21708296), (PMID:28289220)		 RGD
GO_Central
Ensembl		 PMID:10468558 PMID:15644336 PMID:21708296 PMID:28289220 PMID:28629946 More... GO_REF:0000033 GO_REF:0000107, RGD:708588 NCBI chr16:6,831,293...6,869,410
Ensembl chr16:6,824,906...6,863,027 		JBrowse link
G Hao1 hydroxyacid oxidase 1 involved_in ISO
IEA		 (PMID:18215067)
GO_REF:0000107		 RGD
Ensembl		 PMID:18215067 GO_REF:0000107 NCBI chr 3:121,757,400...121,828,721
Ensembl chr 3:121,771,836...121,828,721 		JBrowse link
G Ilvbl ilvB acetolactate synthase like involved_in ISO
IEA		 (PMID:28289220)
GO_REF:0000107		 RGD
Ensembl		 PMID:28289220 GO_REF:0000107 NCBI chr 7:11,039,870...11,049,924
Ensembl chr 7:11,039,871...11,049,924 		JBrowse link
G Pex13 peroxisomal biogenesis factor 13 acts_upstream_of_or_within ISO
IEA		 MGI:2384515 (PMID:12897163)
GO_REF:0000107		 RGD
Ensembl		 PMID:12897163 GO_REF:0000107 NCBI chr14:101,804,673...101,822,367
Ensembl chr14:97,603,539...97,621,262 		JBrowse link
G Phyh phytanoyl-CoA 2-hydroxylase acts_upstream_of_or_within
involved_in		 IDA
IEA
ISO
IBA		 GO_REF:0000107
GO_REF:0000002
(PMID:12915479), (PMID:9326939)
GO_REF:0000033
(PMID:16186124), (PMID:9326939)		 Ensembl
InterPro
RGD
GO_Central		 PMID:9326939 PMID:12915479 PMID:16186124 PMID:10588950 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107, RGD:727286 NCBI chr17:78,238,747...78,255,645
Ensembl chr17:73,329,082...73,346,409 		JBrowse link
G Slc27a2 solute carrier family 27 member 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:10198260)		 Ensembl
RGD		 PMID:10198260 GO_REF:0000107 NCBI chr 3:134,258,101...134,295,581
Ensembl chr 3:113,804,728...113,842,208 		JBrowse link
fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP binding cassette subfamily D member 1 involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:10196381)
UniProtKB:P34230|UniProtKB:P41909 (PMID:17542813), (PMID:18757502), (PMID:21145416), (PMID:23671276), (PMID:9425230)		 UniProt
GO_Central
RGD		 PMID:9425230 PMID:10196381 PMID:17542813 PMID:18757502 PMID:21145416 More... GO_REF:0000024 GO_REF:0000033 NCBI chr  X:156,579,669...156,601,448
Ensembl chr  X:151,428,578...151,450,115 		JBrowse link
G Abcd2 ATP binding cassette subfamily D member 2 involved_in ISO
IEA
IBA		 UniProtKB:P41909 (PMID:21145416)
GO_REF:0000107
GO_REF:0000033
(PMID:10196381)		 RGD
Ensembl
GO_Central		 PMID:10196381 PMID:21145416 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:124,142,597...124,191,202
Ensembl chr 7:122,263,032...122,311,642 		JBrowse link
G Abcd3 ATP binding cassette subfamily D member 3 involved_in ISO
IEA
IBA		 UniProtKB:P33897 (PMID:24333844), (PMID:9425230)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:9425230 PMID:24333844 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:212,536,791...212,590,379
Ensembl chr 2:209,852,087...209,906,020 		JBrowse link
G Acaa1a acetyl-CoA acyltransferase 1A involved_in IDA
IBA
IGI
ISO		 PMID:9325339
GO_REF:0000033
PMID:2882519
(PMID:2365812), (PMID:2882519)		 GO_Central
RGD		 PMID:2365812 PMID:2882519 PMID:9325339 PMID:2882519 GO_REF:0000033, RGD:21201257, RGD:8554082 NCBI chr 8:127,956,126...127,966,348
Ensembl chr 8:119,079,775...119,088,624 		JBrowse link
G Acaa1b acetyl-Coenzyme A acyltransferase 1B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:127,750,771...127,759,589
Ensembl chr 8:118,872,997...118,881,825 		JBrowse link
G Acaa2 acetyl-CoA acyltransferase 2 involved_in IDA
IBA
IEA		 GO_REF:0000033
GO_REF:0000041		 GO_Central
UniProt
RGD		 PMID:11879205 GO_REF:0000033 GO_REF:0000041, RGD:2317624 NCBI chr18:70,620,310...70,648,417
Ensembl chr18:68,345,012...68,373,249 		JBrowse link
G Acad11 acyl-CoA dehydrogenase family, member 11 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 8:104,681,346...104,746,559
Ensembl chr 8:104,681,396...104,746,560 		JBrowse link
G Acadm acyl-CoA dehydrogenase medium chain involved_in TAS
IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000002
GO_REF:0000024
(PMID:2393404)		 Ensembl
InterPro
UniProt
RGD		 PMID:2393404 PMID:15358373 GO_REF:0000002 GO_REF:0000024 GO_REF:0000107, RGD:1358266 NCBI chr 2:245,518,693...245,542,864
Ensembl chr 2:242,858,865...242,883,147 		JBrowse link
G Acadsb acyl-CoA dehydrogenase, short/branched chain TAS RGD PMID:12855692 RGD:1358267 NCBI chr 1:195,619,088...195,660,564
Ensembl chr 1:186,188,987...186,230,379 		JBrowse link
G Acadvl acyl-CoA dehydrogenase, very long chain IDA RGD PMID:8034667 RGD:631729 NCBI chr10:55,231,558...55,236,786
Ensembl chr10:54,732,469...54,738,075 		JBrowse link
G Acat1 acetyl-CoA acetyltransferase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 8:62,876,003...62,905,080
Ensembl chr 8:53,979,813...54,008,855 		JBrowse link
G Acox1 acyl-CoA oxidase 1 involved_in IEA GO_REF:0000002
GO_REF:0000117		 InterPro
UniProt		 GO_REF:0000002 GO_REF:0000117 NCBI chr10:101,905,083...101,930,136
Ensembl chr10:101,406,197...101,431,232 		JBrowse link
G Acox2 acyl-CoA oxidase 2 involved_in IDA
IEA		 GO_REF:0000002
GO_REF:0000117		 InterPro
UniProt
RGD		 PMID:1400324 PMID:8654595 GO_REF:0000002 GO_REF:0000117, RGD:2299949, RGD:2299971 NCBI chr15:19,090,820...19,122,392
Ensembl chr15:16,660,272...16,692,160 		JBrowse link
G Acox3 acyl-CoA oxidase 3, pristanoyl involved_in IEA GO_REF:0000117
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000117 NCBI chr14:79,358,604...79,405,160
Ensembl chr14:75,094,676...75,176,205 		JBrowse link
G Acoxl acyl-CoA oxidase-like involved_in IEA GO_REF:0000117
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000117 NCBI chr 3:135,514,340...135,820,291
Ensembl chr 3:115,061,060...115,364,686 		JBrowse link
G Adipoq adiponectin, C1Q and collagen domain containing involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:2388007 (PMID:12151381)		 UniProt
RGD		 PMID:12151381 GO_REF:0000024 NCBI chr11:91,226,524...91,240,244
Ensembl chr11:77,721,912...77,735,564 		JBrowse link
G Aldh1l2 aldehyde dehydrogenase 1 family, member L2 acts_upstream_of_or_within_positive_effect ISO
IEA		 (PMID:33168096)
GO_REF:0000107		 RGD
Ensembl		 PMID:33168096 GO_REF:0000107 NCBI chr 7:20,254,246...20,305,793
Ensembl chr 7:20,254,233...20,305,776 		JBrowse link
G Auh AU RNA binding methylglutaconyl-CoA hydratase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:12,481,396...12,576,748
Ensembl chr17:12,329,524...12,424,896 		JBrowse link
G Bdh2 3-hydroxybutyrate dehydrogenase 2 involved_in ISO
IEA		 (PMID:16380372)
GO_REF:0000107		 RGD
Ensembl		 PMID:16380372 GO_REF:0000107 NCBI chr 2:223,702,410...223,723,076
Ensembl chr 2:223,702,412...223,723,072 		JBrowse link
G Cpt1a carnitine palmitoyltransferase 1A involved_in IEP
IEA		 GO_REF:0000041 UniProt
RGD		 PMID:31901136 PMID:31953200 GO_REF:0000041, RGD:25823178, RGD:25823179 NCBI chr 1:209,993,881...210,056,329
Ensembl chr 1:200,565,613...200,627,055 		JBrowse link
G Cpt1b carnitine palmitoyltransferase 1B involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 7:122,370,974...122,380,473
Ensembl chr 7:120,491,354...120,500,404 		JBrowse link
G Cpt1c carnitine palmitoyltransferase 1c involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 1:104,579,297...104,593,824
Ensembl chr 1:95,442,817...95,457,342 		JBrowse link
G Cpt2 carnitine palmitoyltransferase 2 involved_in TAS
IEA
IBA
ISS
ISO
IEP		 GO_REF:0000107
GO_REF:0000033
GO_REF:0000024
(PMID:20538056)
GO_REF:0000041		 Ensembl
GO_Central
UniProt
RGD		 PMID:20538056 PMID:16781677 PMID:10380116 PMID:10796071 GO_REF:0000024 GO_REF:0000033 GO_REF:0000041 GO_REF:0000107, RGD:1600744, RGD:21410186, RGD:2326088 NCBI chr 5:127,893,450...127,911,347
Ensembl chr 5:122,664,677...122,682,095 		JBrowse link
G Crot carnitine O-octanoyltransferase involved_in IEA
ISO		 GO_REF:0000041
GO_REF:0000107
(PMID:21619872)		 UniProt
Ensembl
RGD		 PMID:21619872 GO_REF:0000041 GO_REF:0000107 NCBI chr 4:26,031,729...26,088,057
Ensembl chr 4:25,080,587...25,133,109 		JBrowse link
G Decr1 2,4-dienoyl-CoA reductase 1 involved_in IEA
IBA
ISS
ISO		 GO_REF:0000107
GO_REF:0000033
GO_REF:0000024
(PMID:15531764)		 Ensembl
GO_Central
UniProt
RGD		 PMID:15531764 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:29,411,172...29,439,054
Ensembl chr 5:29,411,172...29,439,018 		JBrowse link
G Ech1 enoyl-CoA hydratase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 1:93,241,076...93,248,314
Ensembl chr 1:84,112,751...84,120,795 		JBrowse link
G Echdc1 ethylmalonyl-CoA decarboxylase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:30,304,968...30,355,957
Ensembl chr 1:28,476,200...28,507,319 		JBrowse link
G Echdc2 enoyl CoA hydratase domain containing 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:128,144,241...128,163,611
Ensembl chr 5:122,916,134...122,934,859 		JBrowse link
G Echs1 enoyl-CoA hydratase, short chain 1 involved_in TAS
IEA
IBA
ISO
ISS
IMP		 GO_REF:0000107
GO_REF:0000033
GO_REF:0000041
(PMID:26251176)
GO_REF:0000024		 Ensembl
GO_Central
UniProt
RGD		 PMID:26251176 PMID:2806264 PMID:12379132 GO_REF:0000024 GO_REF:0000033 GO_REF:0000041 GO_REF:0000107, RGD:68828, RGD:2317616 NCBI chr 1:204,324,679...204,333,506
Ensembl chr 1:194,895,036...194,903,884 		JBrowse link
G Eci1 enoyl-CoA delta isomerase 1 acts_upstream_of_or_within
involved_in		 TAS
IEA
ISO
IBA
IDA		 GO_REF:0000107
MGI:2180887 (PMID:11916962)
GO_REF:0000033
PMID:11781327
GO_REF:0000041		 Ensembl
RGD
GO_Central
UniProt		 PMID:11916962 PMID:1958319 PMID:11781327 GO_REF:0000033 GO_REF:0000041 GO_REF:0000107, RGD:61567, RGD:2306199 NCBI chr10:13,961,250...13,974,595
Ensembl chr10:13,456,563...13,470,061 		JBrowse link
G Eci2 enoyl-CoA delta isomerase 2 involved_in IDA
IEA		 GO_REF:0000041 UniProt
RGD		 PMID:11781327 GO_REF:0000041, RGD:2306199 NCBI chr17:29,850,884...29,886,781
Ensembl chr17:29,870,391...29,886,781 		JBrowse link
G Ehhadh enoyl-CoA hydratase and 3-hydroxyacyl CoA dehydrogenase involved_in
acts_upstream_of_or_within		 IDA
IEA
ISO
IBA		 PMID:12106015
GO_REF:0000107
GO_REF:0000117
MGI:1857810 (PMID:17442273)
GO_REF:0000033
PMID:11781327
GO_REF:0000041
(PMID:15060085)		 Ensembl
UniProt
RGD
GO_Central		 PMID:15060085 PMID:17442273 PMID:12106015 PMID:11781327 GO_REF:0000033 GO_REF:0000041 GO_REF:0000107 GO_REF:0000117, RGD:21201263, RGD:2306199 NCBI chr11:92,746,409...92,779,647
Ensembl chr11:79,241,938...79,275,188 		JBrowse link
G Fabp3 fatty acid binding protein 3 NAS RGD PMID:3036869 RGD:728828 NCBI chr 5:147,936,027...147,942,870
Ensembl chr 5:142,651,956...142,658,718 		JBrowse link
G Hadh hydroxyacyl-CoA dehydrogenase involved_in IMP
IEA
IBA
ISS
ISO		 GO_REF:0000107
GO_REF:0000033
GO_REF:0000024
GO_REF:0000041
(PMID:2817332)
(PMID:11489939)		 Ensembl
GO_Central
UniProt
RGD		 PMID:2817332 PMID:11489939 PMID:17491019 GO_REF:0000024 GO_REF:0000033 GO_REF:0000041 GO_REF:0000107, RGD:2302227 NCBI chr 2:222,462,049...222,504,446
Ensembl chr 2:219,787,927...219,830,353 		JBrowse link
G Hadha hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha involved_in
acts_upstream_of_or_within		 IDA
IEA
ISO
IBA		 GO_REF:0000002
GO_REF:0000117
(PMID:29915090), (PMID:31604922)
MGI:2137697 (PMID:11390422)
GO_REF:0000033
GO_REF:0000041		 InterPro
UniProt
RGD
GO_Central		 PMID:11390422 PMID:29915090 PMID:31604922 PMID:1730633 GO_REF:0000002 GO_REF:0000033 GO_REF:0000041 GO_REF:0000117, RGD:1600572 NCBI chr 6:31,907,801...31,947,434
Ensembl chr 6:26,187,956...26,227,869 		JBrowse link
G Hadhb hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta involved_in IDA
IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
(PMID:29915090)
GO_REF:0000041		 GO_Central
Ensembl
RGD
UniProt		 PMID:29915090 PMID:1730633 GO_REF:0000033 GO_REF:0000041 GO_REF:0000107, RGD:1600572 NCBI chr 6:31,873,404...31,907,557
Ensembl chr 6:26,153,578...26,184,869 		JBrowse link
G Hsd17b10 hydroxysteroid (17-beta) dehydrogenase 10 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:12917011)
GO_REF:0000041		 UniProt
Ensembl
RGD		 PMID:12917011 GO_REF:0000024 GO_REF:0000041 GO_REF:0000107 NCBI chr  X:24,568,551...24,571,012
Ensembl chr  X:21,089,122...21,109,488 		JBrowse link
G Hsd17b4 hydroxysteroid (17-beta) dehydrogenase 4 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA
ISS		 GO_REF:0000041
GO_REF:0000107
MGI:2385822 (PMID:17442273)
GO_REF:0000033
(PMID:10400999), (PMID:10706581), (PMID:15060085), (PMID:9482850)
GO_REF:0000024		 UniProt
Ensembl
RGD
GO_Central		 PMID:9482850 PMID:10400999 PMID:10706581 PMID:15060085 PMID:17442273 GO_REF:0000024 GO_REF:0000033 GO_REF:0000041 GO_REF:0000107 NCBI chr18:45,515,427...45,604,467
Ensembl chr18:43,328,824...43,417,952 		JBrowse link
G Lep leptin acts_upstream_of_or_within ISO
IEA		 MGI:2651874 (PMID:22958918)
GO_REF:0000107		 RGD
Ensembl		 PMID:22958918 GO_REF:0000107 NCBI chr 4:58,626,529...58,640,663
Ensembl chr 4:57,661,131...57,675,262 		JBrowse link
G Mtln mitoregulin involved_in ISO (PMID:32243843) RGD PMID:32243843 NCBI chr 3:115,018,810...115,019,668
Ensembl chr 3:115,019,473...115,019,643
Ensembl chr 3:115,019,473...115,019,643 		JBrowse link
G Pex2 peroxisomal biogenesis factor 2 involved_in ISO
IBA
IEA		 (PMID:10528859), (PMID:9765053)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:9765053 PMID:10528859 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:97,957,479...97,973,767
Ensembl chr 2:96,045,958...96,073,404 		JBrowse link
G Pex5 peroxisomal biogenesis factor 5 acts_upstream_of_or_within ISO
IEA		 MGI:2154454|MGI:2176228|MGI:2384516 (PMID:17442273), (PMID:9288097)
GO_REF:0000107		 RGD
Ensembl		 PMID:9288097 PMID:17442273 GO_REF:0000107 NCBI chr 4:158,956,973...158,983,581
Ensembl chr 4:157,270,672...157,296,431 		JBrowse link
G Pex7 peroxisomal biogenesis factor 7 acts_upstream_of_or_within ISO
IEA		 MGI:3052739 (PMID:12915479)
GO_REF:0000107		 RGD
Ensembl		 PMID:12915479 GO_REF:0000107 NCBI chr 1:16,402,319...16,466,304
Ensembl chr 1:14,582,699...14,646,748 		JBrowse link
G Ppard peroxisome proliferator-activated receptor delta involved_in ISO
IEA		 (PMID:14676330)
GO_REF:0000107		 RGD
Ensembl		 PMID:14676330 GO_REF:0000107 NCBI chr20:6,300,527...6,365,707
Ensembl chr20:6,298,785...6,363,968 		JBrowse link
G Scp2 sterol carrier protein 2 involved_in IDA PMID:9325339 UniProt PMID:9325339 RGD:21201257 NCBI chr 5:128,035,714...128,110,015
Ensembl chr 5:122,776,549...122,881,287 		JBrowse link
G Sesn2 sestrin 2 acts_upstream_of_or_within ISO
IEA		 MGI:104663 (PMID:22958918)
GO_REF:0000107		 RGD
Ensembl		 PMID:22958918 GO_REF:0000107 NCBI chr 5:149,986,304...150,005,255
Ensembl chr 5:144,701,530...144,721,260 		JBrowse link
G Slc25a17 solute carrier family 25 member 17 involved_in ISO
IEA		 UniProtKB:Q06497 (PMID:12445829)
GO_REF:0000107		 RGD
Ensembl		 PMID:12445829 GO_REF:0000107 NCBI chr 7:114,724,533...114,767,163
Ensembl chr 7:112,844,375...112,925,945 		JBrowse link
G Slc27a2 solute carrier family 27 member 2 involved_in ISO
IEA		 (PMID:10198260)
GO_REF:0000107		 RGD
Ensembl		 PMID:10198260 GO_REF:0000107 NCBI chr 3:134,258,101...134,295,581
Ensembl chr 3:113,804,728...113,842,208 		JBrowse link
G St13 ST13, Hsp70 interacting protein involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 7:114,769,758...114,805,877
Ensembl chr 7:112,844,375...112,925,945 		JBrowse link
fatty acid beta-oxidation using acyl-CoA dehydrogenase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acad11 acyl-CoA dehydrogenase family, member 11 involved_in ISO
IEA
IBA		 (PMID:21237683)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:21237683 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:104,681,346...104,746,559
Ensembl chr 8:104,681,396...104,746,560 		JBrowse link
G Acadl acyl-CoA dehydrogenase, long chain involved_in IDA
ISO
IBA		 (PMID:15639194), (PMID:9861014)
GO_REF:0000033		 RGD
GO_Central		 PMID:9861014 PMID:15639194 PMID:3968063 GO_REF:0000033, RGD:2317678 NCBI chr 9:75,783,689...75,822,077
Ensembl chr 9:68,333,980...68,372,220 		JBrowse link
G Acadm acyl-CoA dehydrogenase medium chain involved_in IDA
ISO
IEA		 (PMID:18459129)
GO_REF:0000107
(PMID:16972171), (PMID:1902818), (PMID:19224950), (PMID:25416781), (PMID:3597357)		 RGD
Ensembl		 PMID:1902818 PMID:3597357 PMID:16972171 PMID:18459129 PMID:19224950 More... GO_REF:0000107, RGD:2317678 NCBI chr 2:245,518,693...245,542,864
Ensembl chr 2:242,858,865...242,883,147 		JBrowse link
G Acads acyl-CoA dehydrogenase short chain involved_in IDA
IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
(PMID:3597357)		 GO_Central
Ensembl
RGD		 PMID:3597357 PMID:3968063 GO_REF:0000033 GO_REF:0000107, RGD:2317678 NCBI chr12:47,154,259...47,163,580
Ensembl chr12:41,493,626...41,502,898 		JBrowse link
G Acadvl acyl-CoA dehydrogenase, very long chain involved_in ISO
IEA
ISS		 (PMID:7668252), (PMID:9599005)
(PMID:15639194)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:7668252 PMID:9599005 PMID:15639194 GO_REF:0000024 GO_REF:0000107 NCBI chr10:55,231,558...55,236,786
Ensembl chr10:54,732,469...54,738,075 		JBrowse link
G Etfa electron transfer flavoprotein subunit alpha involved_in ISO
IBA
IEA
ISS		 (PMID:25416781)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024		 RGD
GO_Central
Ensembl
UniProt		 PMID:25416781 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:64,731,192...64,787,965
Ensembl chr 8:55,835,134...55,891,969 		JBrowse link
G Etfb electron transfer flavoprotein subunit beta involved_in ISO
IEA
IBA
ISS		 (PMID:25416781)
GO_REF:0000107
(PMID:25023281)
GO_REF:0000033
GO_REF:0000024		 RGD
Ensembl
GO_Central
UniProt		 PMID:25023281 PMID:25416781 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:102,988,499...103,002,663
Ensembl chr 1:93,851,858...93,866,068 		JBrowse link
G Etfdh electron transfer flavoprotein dehydrogenase involved_in ISO (PMID:17412732) RGD PMID:17412732 NCBI chr 2:167,038,707...167,060,758
Ensembl chr 2:164,729,749...164,762,745 		JBrowse link
G Gcdh glutaryl-CoA dehydrogenase involved_in ISO
IEA
IBA		 (PMID:25416781)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:25416781 GO_REF:0000033 GO_REF:0000107 NCBI chr19:40,168,038...40,174,536
Ensembl chr19:23,263,264...23,269,681 		JBrowse link
G Ivd isovaleryl-CoA dehydrogenase involved_in ISO
IC		 (PMID:3597357)
PMID:6401713		 RGD PMID:3597357 PMID:6401713 RGD:8554099 NCBI chr 3:126,305,584...126,326,016
Ensembl chr 3:105,851,683...105,872,575 		JBrowse link
fatty acid beta-oxidation using acyl-CoA oxidase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acaa1a acetyl-CoA acyltransferase 1A involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 8:127,956,126...127,966,348
Ensembl chr 8:119,079,775...119,088,624 		JBrowse link
G Acaa1b acetyl-Coenzyme A acyltransferase 1B involved_in IEA
ISO		 GO_REF:0000041
MGI:3617359 (PMID:15589695)		 UniProt
RGD		 PMID:15589695 GO_REF:0000041 NCBI chr 8:127,750,771...127,759,589
Ensembl chr 8:118,872,997...118,881,825 		JBrowse link
G Acox1 acyl-CoA oxidase 1 involved_in IDA
IEA
IBA
ISO		 GO_REF:0000107
GO_REF:0000041
GO_REF:0000033
GO_REF:0000002
(PMID:18536048)		 Ensembl
UniProt
GO_Central
InterPro
RGD		 PMID:18536048 PMID:1400324 GO_REF:0000002 GO_REF:0000033 GO_REF:0000041 GO_REF:0000107, RGD:2299949 NCBI chr10:101,905,083...101,930,136
Ensembl chr10:101,406,197...101,431,232 		JBrowse link
G Acox2 acyl-CoA oxidase 2 involved_in ISO
IBA
IEA		 (PMID:27884763)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000002		 RGD
GO_Central
Ensembl
InterPro		 PMID:27884763 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr15:19,090,820...19,122,392
Ensembl chr15:16,660,272...16,692,160 		JBrowse link
G Acox3 acyl-CoA oxidase 3, pristanoyl involved_in IDA
IBA
IEA		 GO_REF:0000033
GO_REF:0000002
GO_REF:0000041		 GO_Central
InterPro
UniProt
RGD		 PMID:1400324 PMID:8654595 PMID:8026493 GO_REF:0000002 GO_REF:0000033 GO_REF:0000041, RGD:2299949, RGD:2299971, RGD:2299969 NCBI chr14:79,358,604...79,405,160
Ensembl chr14:75,094,676...75,176,205 		JBrowse link
G Acoxl acyl-CoA oxidase-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:135,514,340...135,820,291
Ensembl chr 3:115,061,060...115,364,686 		JBrowse link
G Crat carnitine O-acetyltransferase involved_in ISO
IEA
ISS		 (PMID:23485643)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:23485643 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:34,073,504...34,087,099
Ensembl chr 3:13,675,684...13,689,255 		JBrowse link
G Ehhadh enoyl-CoA hydratase and 3-hydroxyacyl CoA dehydrogenase involved_in ISO
IEA		 MGI:1857810 (PMID:34651140)
GO_REF:0000107		 RGD
Ensembl		 PMID:34651140 GO_REF:0000107 NCBI chr11:92,746,409...92,779,647
Ensembl chr11:79,241,938...79,275,188 		JBrowse link
G Hsd17b4 hydroxysteroid (17-beta) dehydrogenase 4 involved_in ISO
IEA		 MGI:2385822 (PMID:16484321)
GO_REF:0000107		 RGD
Ensembl		 PMID:16484321 GO_REF:0000107 NCBI chr18:45,515,427...45,604,467
Ensembl chr18:43,328,824...43,417,952 		JBrowse link
fatty acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadl acyl-CoA dehydrogenase, long chain acts_upstream_of_or_within ISO (PMID:21151927) RGD PMID:21151927 NCBI chr 9:75,783,689...75,822,077
Ensembl chr 9:68,333,980...68,372,220 		JBrowse link
G Acadvl acyl-CoA dehydrogenase, very long chain acts_upstream_of_or_within ISO
IEA		 MGI:3606688 (PMID:21151927)
GO_REF:0000107		 RGD
Ensembl		 PMID:21151927 GO_REF:0000107 NCBI chr10:55,231,558...55,236,786
Ensembl chr10:54,732,469...54,738,075 		JBrowse link
G Acot7 acyl-CoA thioesterase 7 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:11834298)		 GO_Central
RGD		 PMID:11834298 GO_REF:0000033 NCBI chr 5:167,969,284...168,062,033
Ensembl chr 5:162,684,645...162,779,309 		JBrowse link
G Acot8 acyl-CoA thioesterase 8 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:173,950,530...173,962,188
Ensembl chr 3:153,531,193...153,542,851 		JBrowse link
G Acox1 acyl-CoA oxidase 1 involved_in ISO
IEA		 (PMID:32169171)
GO_REF:0000107		 RGD
Ensembl		 PMID:32169171 GO_REF:0000107 NCBI chr10:101,905,083...101,930,136
Ensembl chr10:101,406,197...101,431,232 		JBrowse link
G Decr2 2,4-dienoyl-CoA reductase 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:15,609,389...15,617,779
Ensembl chr10:15,002,926...15,118,479 		JBrowse link
G Eci2 enoyl-CoA delta isomerase 2 involved_in ISO (PMID:10419495) RGD PMID:10419495 NCBI chr17:29,850,884...29,886,781
Ensembl chr17:29,870,391...29,886,781 		JBrowse link
G Faah fatty acid amide hydrolase involved_in IDA
IEA
IBA
ISO		 GO_REF:0000107
GO_REF:0000033
PMID:9122178
(PMID:9122178)
PMID:17649977		 Ensembl
GO_Central
RGD		 PMID:9122178 PMID:12734197 PMID:9122178 PMID:17649977 GO_REF:0000033 GO_REF:0000107, RGD:1625736, RGD:8554689, RGD:14397564 NCBI chr 5:134,716,545...134,735,396
Ensembl chr 5:129,479,824...129,498,677 		JBrowse link
G Lep leptin IDA RGD PMID:12058043 RGD:625499 NCBI chr 4:58,626,529...58,640,663
Ensembl chr 4:57,661,131...57,675,262 		JBrowse link
G Lpin1 lipin 1 involved_in IBA
ISO		 GO_REF:0000033
(PMID:16950137)		 GO_Central
RGD		 PMID:16950137 GO_REF:0000033 NCBI chr 6:45,039,110...45,145,845
Ensembl chr 6:39,312,748...39,417,097 		JBrowse link
G Lpin2 lipin 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:118,529,988...118,604,796
Ensembl chr 9:111,083,745...111,158,193 		JBrowse link
G Lpin3 lipin 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:169,953,479...169,978,034
Ensembl chr 3:149,534,051...149,558,327 		JBrowse link
G Nme4 NME/NM23 nucleoside diphosphate kinase 4 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:15,619,106...15,622,961
Ensembl chr10:15,002,926...15,118,479 		JBrowse link
G Pcca propionyl-CoA carboxylase subunit alpha TAS RGD PMID:2745462 RGD:633579 NCBI chr15:106,034,586...106,374,908
Ensembl chr15:99,627,982...99,968,266 		JBrowse link
G Pccb propionyl-CoA carboxylase subunit beta TAS RGD PMID:3464942 RGD:633580 NCBI chr 8:110,470,197...110,520,222
Ensembl chr 8:101,590,737...101,641,234 		JBrowse link
G Rab11fip3 RAB11 family interacting protein 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:15,002,650...15,086,382
Ensembl chr10:15,002,926...15,118,479 		JBrowse link
folic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mthfs methenyltetrahydrofolate synthetase involved_in ISO (PMID:12764149) RGD PMID:12764149 NCBI chr 8:89,729,498...89,801,998
Ensembl chr 8:89,729,508...89,799,089 		JBrowse link
G Pm20d2 peptidase M20 domain containing 2 NOT|involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:47,566,059...47,586,334
Ensembl chr 5:47,566,072...47,586,212 		JBrowse link
gamma-aminobutyrate shunt term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gad2 glutamate decarboxylase 2 involved_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:8999827 GO_REF:0000033, RGD:1625237 NCBI chr17:89,671,718...89,734,246
Ensembl chr17:84,763,628...84,826,155 		JBrowse link
gamma-aminobutyric acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase involved_in ISO
IC
IBA		 (PMID:11561735)
GO_REF:0000111
GO_REF:0000033		 RGD
UniProt
GO_Central		 PMID:11561735 GO_REF:0000033 GO_REF:0000111 NCBI chr10:7,503,351...7,599,474
Ensembl chr10:6,999,819...7,092,835 		JBrowse link
G Aldh5a1 aldehyde dehydrogenase 5 family, member A1 involved_in
acts_upstream_of_or_within		 ISS
IEA
ISO
IBA
TAS		 GO_REF:0000024
GO_REF:0000104
GO_REF:0000002
MGI:2180159 (PMID:11544478), (PMID:15262267)
GO_REF:0000033
PMID:7814412
(PMID:15037717), (PMID:9683595)
GO_REF:0000041		 UniProt
InterPro
RGD
GO_Central		 PMID:9683595 PMID:11544478 PMID:15037717 PMID:15262267 PMID:7814412 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000041 GO_REF:0000104, RGD:632258 NCBI chr17:40,560,373...40,586,711
Ensembl chr17:40,130,883...40,158,677 		JBrowse link
glutamate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gad1 glutamate decarboxylase 1 involved_in ISO
IEA		 (PMID:17384644)
GO_REF:0000107		 RGD
Ensembl		 PMID:17384644 GO_REF:0000107 NCBI chr 3:75,777,260...75,818,099
Ensembl chr 3:55,369,704...55,410,333 		JBrowse link
G Glud1 glutamate dehydrogenase 1 involved_in ISO
IBA		 (PMID:11032875), (PMID:6121377)
GO_REF:0000033		 RGD
GO_Central		 PMID:6121377 PMID:11032875 GO_REF:0000033 NCBI chr16:9,646,569...9,680,215
Ensembl chr16:9,640,312...9,673,957 		JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 acts_upstream_of_or_within ISO (PMID:4193185) RGD PMID:4193185 NCBI chr19:9,180,428...9,206,113
Ensembl chr19:9,174,311...9,199,994 		JBrowse link
glutamate catabolic process to aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1 acts_upstream_of_or_within ISO
IEA		 (PMID:4193185)
GO_REF:0000107		 RGD
Ensembl		 PMID:4193185 GO_REF:0000107 NCBI chr 1:252,306,541...252,337,622
Ensembl chr 1:242,357,306...242,380,633 		JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 acts_upstream_of_or_within ISO (PMID:4193185) RGD PMID:4193185 NCBI chr19:9,180,428...9,206,113
Ensembl chr19:9,174,311...9,199,994 		JBrowse link
glutamate catabolic process via 2-hydroxyglutarate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adhfe1 alcohol dehydrogenase, iron containing, 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:16435184)		 UniProt
RGD		 PMID:16435184 GO_REF:0000024 NCBI chr 5:14,488,784...14,515,405
Ensembl chr 5:9,705,970...9,732,517 		JBrowse link
glutamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gls glutaminase involved_in
acts_upstream_of_or_within		 TAS
ISO
IBA
IEA
ISS		 (PMID:22228304)
MGI:3514104 (PMID:16641247)
GO_REF:0000033
GO_REF:0000107
(PMID:22049910)
GO_REF:0000024		 RGD
GO_Central
Ensembl
UniProt		 PMID:16641247 PMID:22049910 PMID:22228304 PMID:1918000 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107, RGD:728510 NCBI chr 9:56,836,584...56,908,861
Ensembl chr 9:49,344,781...49,416,900 		JBrowse link
G Gls2 glutaminase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:1,201,757...1,218,014
Ensembl chr 7:617,288...633,426 		JBrowse link
G Ppat phosphoribosyl pyrophosphate amidotransferase IDA RGD PMID:8463258 RGD:633710 NCBI chr14:31,570,010...31,604,410
Ensembl chr14:31,216,165...31,250,144 		JBrowse link
glycine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amt aminomethyltransferase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:117,859,700...117,866,692
Ensembl chr 8:108,976,472...108,988,126 		JBrowse link
G Gldc glycine decarboxylase involved_in ISO
IEA		 (PMID:28244183)
GO_REF:0000002		 RGD
InterPro		 PMID:28244183 GO_REF:0000002 NCBI chr 1:237,296,753...237,375,620
Ensembl chr 1:227,883,249...227,962,097 		JBrowse link
glycine decarboxylation via glycine cleavage system term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07067762.1 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000002		 GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 Ensembl chr 9:56,634,648...56,635,789 JBrowse link
G Amt aminomethyltransferase involved_in ISO
IEA		 (PMID:16051266)
GO_REF:0000107		 RGD
Ensembl		 PMID:16051266 GO_REF:0000107 NCBI chr 8:117,859,700...117,866,692
Ensembl chr 8:108,976,472...108,988,126 		JBrowse link
G ENSRNOG00000069283 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000002		 GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 Ensembl chr16:24,647,938...24,648,620 JBrowse link
G Gcsh glycine cleavage system protein H involved_in IMP
IEA
IBA		 GO_REF:0000104
GO_REF:0000002
GO_REF:0000033		 UniProt
InterPro
GO_Central
RGD		 PMID:6402507 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104, RGD:1598699 NCBI chr19:61,944,850...61,955,607
Ensembl chr19:45,036,011...45,046,792 		JBrowse link
G Gcshl1 glycine cleavage system protein H like 1 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000104
GO_REF:0000002		 GO_Central
UniProt
InterPro		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 NCBI chr 1:260,311,346...260,312,097
Ensembl chr 1:260,311,343...260,311,843 		JBrowse link
G Gldc glycine decarboxylase involved_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:6778858 GO_REF:0000033, RGD:1642728 NCBI chr 1:237,296,753...237,375,620
Ensembl chr 1:227,883,249...227,962,097 		JBrowse link
glycolate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hao1 hydroxyacid oxidase 1 involved_in ISO
IEA		 (PMID:18215067)
GO_REF:0000107		 RGD
Ensembl		 PMID:18215067 GO_REF:0000107 NCBI chr 3:121,757,400...121,828,721
Ensembl chr 3:121,771,836...121,828,721 		JBrowse link
glyoxylate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt alanine--glyoxylate aminotransferase involved_in ISO (PMID:22198249) RGD PMID:22198249 NCBI chr 9:101,122,793...101,132,746
Ensembl chr 9:93,675,384...93,685,336 		JBrowse link
G Agxt2 alanine-glyoxylate aminotransferase 2 involved_in ISO
IEA
IBA		 (PMID:20018850)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:20018850 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:61,063,416...61,104,828
Ensembl chr 2:59,336,283...59,377,926 		JBrowse link
G Hoga1 4-hydroxy-2-oxoglutarate aldolase 1 involved_in ISO
IEA
IBA		 (PMID:20797690)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:20797690 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:250,806,430...250,833,544
Ensembl chr 1:240,857,126...240,884,568 		JBrowse link
homocysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blmh bleomycin hydrolase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:62,270,170...62,313,349
Ensembl chr10:61,758,478...61,815,212 		JBrowse link
G Cbs cystathionine beta synthase involved_in ISO
IEA
ISS		 (PMID:18776696), (PMID:24416422)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:18776696 PMID:24416422 GO_REF:0000024 GO_REF:0000107 NCBI chr20:9,709,394...9,733,925
Ensembl chr20:9,708,090...9,732,764 		JBrowse link
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase involved_in ISO (PMID:11466310) RGD PMID:11466310 NCBI chr 1:36,695,376...36,727,341
Ensembl chr 1:34,867,089...34,899,425 		JBrowse link
homogentisate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fah fumarylacetoacetate hydrolase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:138,548,830...138,571,599
Ensembl chr 1:138,548,834...138,571,505 		JBrowse link
isoleucine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadsb acyl-CoA dehydrogenase, short/branched chain involved_in ISO
IEA
ISS		 (PMID:11013134)
GO_REF:0000107
GO_REF:0000041
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:11013134 GO_REF:0000024 GO_REF:0000041 GO_REF:0000107 NCBI chr 1:195,619,088...195,660,564
Ensembl chr 1:186,188,987...186,230,379 		JBrowse link
G Acat1 acetyl-CoA acetyltransferase 1 involved_in ISO
IEA		 (PMID:1979337), (PMID:8103405)
GO_REF:0000107		 RGD
Ensembl		 PMID:1979337 PMID:8103405 GO_REF:0000107 NCBI chr 8:62,876,003...62,905,080
Ensembl chr 8:53,979,813...54,008,855 		JBrowse link
G Bcat2 branched chain amino acid transaminase 2 acts_upstream_of_or_within IDA
IEA
ISO		 GO_REF:0000107
MGI:3772355 (PMID:17767905)		 Ensembl
RGD		 PMID:17767905 PMID:11733007 GO_REF:0000107, RGD:1582175 NCBI chr 1:105,175,157...105,196,474
Ensembl chr 1:96,042,625...96,060,007 		JBrowse link
G Bckdk branched chain ketoacid dehydrogenase kinase IMP RGD PMID:27472223 RGD:39131293 NCBI chr 1:191,945,809...191,950,480
Ensembl chr 1:182,515,327...182,536,633 		JBrowse link
G Hsd17b10 hydroxysteroid (17-beta) dehydrogenase 10 involved_in ISO
IEA
ISS		 (PMID:18996107), (PMID:19706438)
GO_REF:0000107
GO_REF:0000041
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:18996107 PMID:19706438 GO_REF:0000024 GO_REF:0000041 GO_REF:0000107 NCBI chr  X:24,568,551...24,571,012
Ensembl chr  X:21,089,122...21,109,488 		JBrowse link
L-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt alanine--glyoxylate aminotransferase involved_in ISO (PMID:17696873), (PMID:18492492), (PMID:22198249) RGD PMID:17696873 PMID:18492492 PMID:22198249 NCBI chr 9:101,122,793...101,132,746
Ensembl chr 9:93,675,384...93,685,336 		JBrowse link
G Gpt glutamic--pyruvic transaminase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 7:110,295,599...110,300,134
Ensembl chr 7:108,416,642...108,419,494 		JBrowse link
G Gpt2 glutamic--pyruvic transaminase 2 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr19:37,700,023...37,734,551
Ensembl chr19:21,517,621...21,560,610 		JBrowse link
L-alanine catabolic process, by transamination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt2 alanine-glyoxylate aminotransferase 2 involved_in ISO
IEA
IBA		 (PMID:20018850)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:20018850 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:61,063,416...61,104,828
Ensembl chr 2:59,336,283...59,377,926 		JBrowse link
L-cysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt alanine--glyoxylate aminotransferase involved_in ISO (PMID:18492492) RGD PMID:18492492 NCBI chr 9:101,122,793...101,132,746
Ensembl chr 9:93,675,384...93,685,336 		JBrowse link
G Cbs cystathionine beta synthase involved_in ISO
IEA		 (PMID:15520012)
GO_REF:0000107		 RGD
Ensembl		 PMID:15520012 GO_REF:0000107 NCBI chr20:9,709,394...9,733,925
Ensembl chr20:9,708,090...9,732,764 		JBrowse link
G Cdo1 cysteine dioxygenase type 1 involved_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:16611641 GO_REF:0000033, RGD:2301357 NCBI chr18:39,432,473...39,447,253
Ensembl chr18:39,432,474...39,447,296 		JBrowse link
L-cysteine catabolic process to hypotaurine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csad cysteine sulfinic acid decarboxylase involved_in IDA PMID:9635011 UniProt PMID:9635011 RGD:13800536 NCBI chr 7:135,187,175...135,216,495
Ensembl chr 7:133,308,574...133,337,615 		JBrowse link
L-cysteine catabolic process to taurine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csad cysteine sulfinic acid decarboxylase involved_in IDA PMID:9635011 UniProt PMID:9635011 RGD:13800536 NCBI chr 7:135,187,175...135,216,495
Ensembl chr 7:133,308,574...133,337,615 		JBrowse link
L-histidine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amdhd1 amidohydrolase domain containing 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:28,043,923...28,059,156
Ensembl chr 7:28,043,716...28,059,156 		JBrowse link
G Hal histidine ammonia lyase involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
GO_REF:0000002
(PMID:8486363)		 GO_Central
Ensembl
InterPro
RGD		 PMID:8486363 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:29,894,495...29,924,744
Ensembl chr 7:28,006,972...28,037,701 		JBrowse link
G Hdc histidine decarboxylase involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000107
(PMID:11478947)
GO_REF:0000033
(PMID:22767596)		 Ensembl
RGD
GO_Central		 PMID:11478947 PMID:22767596 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:134,300,628...134,318,704
Ensembl chr 3:113,847,260...113,865,341 		JBrowse link
G Uroc1 urocanate hydratase 1 involved_in ISO
IEA
IBA		 (PMID:19304569)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:19304569 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:124,402,119...124,433,787
Ensembl chr 4:122,844,926...122,876,591 		JBrowse link
L-histidine catabolic process to glutamate and formamide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amdhd1 amidohydrolase domain containing 1 involved_in IEA GO_REF:0000041
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000041 NCBI chr 7:28,043,923...28,059,156
Ensembl chr 7:28,043,716...28,059,156 		JBrowse link
G Ftcd formimidoyltransferase cyclodeaminase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr20:12,054,710...12,068,219
Ensembl chr20:12,055,208...12,068,735 		JBrowse link
G Hal histidine ammonia lyase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 7:29,894,495...29,924,744
Ensembl chr 7:28,006,972...28,037,701 		JBrowse link
G Uroc1 urocanate hydratase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 4:124,402,119...124,433,787
Ensembl chr 4:122,844,926...122,876,591 		JBrowse link
L-histidine catabolic process to glutamate and formate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amdhd1 amidohydrolase domain containing 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 7:28,043,923...28,059,156
Ensembl chr 7:28,043,716...28,059,156 		JBrowse link
G Ftcd formimidoyltransferase cyclodeaminase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr20:12,054,710...12,068,219
Ensembl chr20:12,055,208...12,068,735 		JBrowse link
G Hal histidine ammonia lyase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 7:29,894,495...29,924,744
Ensembl chr 7:28,006,972...28,037,701 		JBrowse link
G Uroc1 urocanate hydratase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 4:124,402,119...124,433,787
Ensembl chr 4:122,844,926...122,876,591 		JBrowse link
L-kynurenine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kyat1 kynurenine aminotransferase 1 involved_in IDA
IEA		 GO_REF:0000041 UniProt
RGD		 PMID:7796908 GO_REF:0000041, RGD:9685040 NCBI chr 3:33,857,407...33,891,153
Ensembl chr 3:13,459,591...13,493,355 		JBrowse link
G Kyat3 kynurenine aminotransferase 3 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 2:234,362,306...234,407,646
Ensembl chr 2:231,701,963...231,747,227 		JBrowse link
G Kynu kynureninase involved_in IEA GO_REF:0000041
GO_REF:0000104		 UniProt GO_REF:0000041 GO_REF:0000104 NCBI chr 3:48,188,286...48,338,996
Ensembl chr 3:27,778,772...27,929,488 		JBrowse link
L-leucine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Auh AU RNA binding methylglutaconyl-CoA hydratase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr17:12,481,396...12,576,748
Ensembl chr17:12,329,524...12,424,896 		JBrowse link
G Bckdk branched chain ketoacid dehydrogenase kinase IMP RGD PMID:27472223 RGD:39131293 NCBI chr 1:191,945,809...191,950,480
Ensembl chr 1:182,515,327...182,536,633 		JBrowse link
G Hmgcl 3-hydroxy-3-methylglutaryl-CoA lyase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:153,461,738...153,475,552
Ensembl chr 5:148,178,252...148,192,068 		JBrowse link
G Hmgcll1 3-hydroxy-3-methylglutaryl-CoA lyase like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:85,637,708...85,799,759
Ensembl chr 8:76,757,497...76,886,816 		JBrowse link
G Ivd isovaleryl-CoA dehydrogenase involved_in IEA
IBA
IDA
ISO		 GO_REF:0000041
GO_REF:0000033
PMID:6401713
(PMID:7640268)		 UniProt
GO_Central
RGD		 PMID:7640268 PMID:6401713 GO_REF:0000033 GO_REF:0000041, RGD:8554099 NCBI chr 3:126,305,584...126,326,016
Ensembl chr 3:105,851,683...105,872,575 		JBrowse link
G Mccc1 methylcrotonyl-CoA carboxylase subunit 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 2:118,799,147...118,851,181
Ensembl chr 2:118,799,150...118,851,222 		JBrowse link
G Mccc2 methylcrotonyl-CoA carboxylase subunit 2 involved_in IEA
IBA		 GO_REF:0000041
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000041 NCBI chr 2:33,039,044...33,110,092
Ensembl chr 2:31,304,932...31,375,972 		JBrowse link
L-lysine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aass aminoadipate-semialdehyde synthase acts_upstream_of_or_within ISO (PMID:10567240) RGD PMID:10567240 NCBI chr 4:52,572,146...52,628,811
Ensembl chr 4:51,606,462...51,663,136 		JBrowse link
L-lysine catabolic process to acetyl-CoA via L-pipecolate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pipox pipecolic acid and sarcosine oxidase involved_in ISO
IEA
IBA		 (PMID:10642506)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:10642506 GO_REF:0000033 GO_REF:0000107 NCBI chr10:63,267,946...63,281,556
Ensembl chr10:62,769,900...62,782,370 		JBrowse link
L-lysine catabolic process to acetyl-CoA via saccharopine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aadat aminoadipate aminotransferase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr16:34,520,236...34,566,388
Ensembl chr16:29,509,394...29,544,332 		JBrowse link
G Aass aminoadipate-semialdehyde synthase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 4:52,572,146...52,628,811
Ensembl chr 4:51,606,462...51,663,136 		JBrowse link
G Dlst dihydrolipoamide S-succinyltransferase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 6:104,758,511...104,783,296
Ensembl chr 6:104,758,631...104,783,296 		JBrowse link
L-phenylalanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07068905.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 8:817,915...819,124 JBrowse link
G Fah fumarylacetoacetate hydrolase involved_in IEA
IBA		 GO_REF:0000041
GO_REF:0000104
GO_REF:0000043
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 NCBI chr 1:138,548,830...138,571,599
Ensembl chr 1:138,548,834...138,571,505 		JBrowse link
G Gstz1 glutathione S-transferase zeta 1 involved_in IEA
IBA		 GO_REF:0000041
GO_REF:0000043
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000041 GO_REF:0000043 NCBI chr 6:112,525,576...112,536,228
Ensembl chr 6:106,794,074...106,805,284 		JBrowse link
G Hgd homogentisate 1, 2-dioxygenase involved_in IEA
IBA		 GO_REF:0000041
GO_REF:0000002
GO_REF:0000033		 UniProt
InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000041 NCBI chr11:63,086,750...63,138,325
Ensembl chr11:63,086,752...63,138,323 		JBrowse link
G Hpd 4-hydroxyphenylpyruvate dioxygenase involved_in IEA GO_REF:0000041
GO_REF:0000043		 UniProt GO_REF:0000041 GO_REF:0000043 NCBI chr12:33,381,397...33,392,750
Ensembl chr12:33,381,231...33,392,766 		JBrowse link
G Il4i1 interleukin 4 induced 1 involved_in ISO (PMID:17356132), (PMID:25767141) RGD PMID:17356132 PMID:25767141 NCBI chr 1:104,435,540...104,461,049
Ensembl chr 1:95,295,601...95,324,562 		JBrowse link
G Pah phenylalanine hydroxylase involved_in IEA GO_REF:0000041
GO_REF:0000043
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 NCBI chr 7:23,793,096...23,885,631
Ensembl chr 7:21,933,179...21,998,130 		JBrowse link
G Qdpr quinoid dihydropteridine reductase involved_in IEP
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:4155291 GO_REF:0000033, RGD:5128604 NCBI chr14:65,670,251...65,683,853
Ensembl chr14:65,670,131...65,683,854 		JBrowse link
G Tat tyrosine aminotransferase involved_in IEA
IBA		 GO_REF:0000041
GO_REF:0000043
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000041 GO_REF:0000043 NCBI chr19:54,856,604...54,867,168
Ensembl chr19:37,947,112...37,958,031 		JBrowse link
L-serine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta synthase involved_in ISO
IEA		 (PMID:18776696)
GO_REF:0000107		 RGD
Ensembl		 PMID:18776696 GO_REF:0000107 NCBI chr20:9,709,394...9,733,925
Ensembl chr20:9,708,090...9,732,764 		JBrowse link
G Sds serine dehydratase involved_in IEA
IBA
ISO		 GO_REF:0000107
GO_REF:0000033
(PMID:15689518), (PMID:18342636)		 Ensembl
GO_Central
RGD		 PMID:15689518 PMID:18342636 GO_REF:0000033 GO_REF:0000107 NCBI chr12:41,743,796...41,751,108
Ensembl chr12:36,083,229...36,088,203 		JBrowse link
G Shmt1 serine hydroxymethyltransferase 1 involved_in ISO (PMID:17482557) RGD PMID:17482557 NCBI chr10:45,968,959...45,990,341
Ensembl chr10:45,468,700...45,497,820 		JBrowse link
L-tryptophan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acmsd aminocarboxymuconate semialdehyde decarboxylase IDA RGD PMID:11802786 RGD:70243 NCBI chr13:41,752,894...41,798,427
Ensembl chr13:39,200,314...39,245,209 		JBrowse link
G Afmid arylformamidase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:103,544,822...103,560,408
Ensembl chr10:103,046,180...103,061,718 		JBrowse link
G Haao 3-hydroxyanthranilate 3,4-dioxygenase involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 6:16,598,325...16,617,590
Ensembl chr 6:10,845,771...10,864,877 		JBrowse link
G Ido1 indoleamine 2,3-dioxygenase 1 involved_in IEA GO_REF:0000117
GO_REF:0000043		 UniProt GO_REF:0000043 GO_REF:0000117 NCBI chr16:74,133,259...74,145,328
Ensembl chr16:67,430,578...67,442,730 		JBrowse link
G Ido2 indoleamine 2,3-dioxygenase 2 involved_in IEA GO_REF:0000117
GO_REF:0000043		 UniProt GO_REF:0000043 GO_REF:0000117 NCBI chr16:74,161,761...74,200,651
Ensembl chr16:67,459,190...67,496,324 		JBrowse link
G Il4i1 interleukin 4 induced 1 involved_in ISO (PMID:17356132), (PMID:25767141) RGD PMID:17356132 PMID:25767141 NCBI chr 1:104,435,540...104,461,049
Ensembl chr 1:95,295,601...95,324,562 		JBrowse link
G Kmo kynurenine 3-monooxygenase involved_in IEA GO_REF:0000104
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chr13:90,089,340...90,121,108
Ensembl chr13:87,557,286...87,588,881 		JBrowse link
G Kynu kynureninase involved_in ISO
IEA		 (PMID:17334708)
GO_REF:0000002
GO_REF:0000104		 RGD
InterPro
UniProt		 PMID:17334708 GO_REF:0000002 GO_REF:0000104 NCBI chr 3:48,188,286...48,338,996
Ensembl chr 3:27,778,772...27,929,488 		JBrowse link
G Tdo2 tryptophan 2,3-dioxygenase involved_in IEA GO_REF:0000043
GO_REF:0000117		 UniProt GO_REF:0000043 GO_REF:0000117 NCBI chr 2:169,567,656...169,585,586
Ensembl chr 2:167,269,579...167,287,511 		JBrowse link
L-tryptophan catabolic process to acetyl-CoA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kynu kynureninase IDA RGD PMID:7236232 RGD:2303721 NCBI chr 3:48,188,286...48,338,996
Ensembl chr 3:27,778,772...27,929,488 		JBrowse link
G Tdo2 tryptophan 2,3-dioxygenase involved_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:7236232 GO_REF:0000033, RGD:2303721 NCBI chr 2:169,567,656...169,585,586
Ensembl chr 2:167,269,579...167,287,511 		JBrowse link
L-tryptophan catabolic process to indole-3-acetate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il4i1 interleukin 4 induced 1 involved_in ISO (PMID:32818467), (PMID:32866000) RGD PMID:32818467 PMID:32866000 NCBI chr 1:104,435,540...104,461,049
Ensembl chr 1:95,295,601...95,324,562 		JBrowse link
L-tryptophan catabolic process to kynurenine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afmid arylformamidase involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000041
GO_REF:0000002
GO_REF:0000104
GO_REF:0000107
(PMID:15866519)
GO_REF:0000033		 UniProt
InterPro
Ensembl
RGD
GO_Central		 PMID:15866519 GO_REF:0000002 GO_REF:0000033 GO_REF:0000041 GO_REF:0000104 GO_REF:0000107 NCBI chr10:103,544,822...103,560,408
Ensembl chr10:103,046,180...103,061,718 		JBrowse link
G Ido1 indoleamine 2,3-dioxygenase 1 involved_in
acts_upstream_of_or_within		 IDA
IEA
ISO
IBA		 GO_REF:0000002
GO_REF:0000107
GO_REF:0000104
(PMID:11751753), (PMID:2419335)
GO_REF:0000033		 InterPro
Ensembl
UniProt
RGD
GO_Central		 PMID:2419335 PMID:11751753 PMID:10719243 PMID:11513477 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107, RGD:2290190, RGD:2290543 NCBI chr16:74,133,259...74,145,328
Ensembl chr16:67,430,578...67,442,730 		JBrowse link
G Ido2 indoleamine 2,3-dioxygenase 2 involved_in
acts_upstream_of_or_within		 ISO
IEA
IBA		 (PMID:17671174)
GO_REF:0000107
GO_REF:0000002
GO_REF:0000104
(PMID:17499941), (PMID:17671174)
GO_REF:0000033
GO_REF:0000041		 RGD
Ensembl
InterPro
UniProt
GO_Central		 PMID:17499941 PMID:17671174 GO_REF:0000002 GO_REF:0000033 GO_REF:0000041 GO_REF:0000104 GO_REF:0000107 NCBI chr16:74,161,761...74,200,651
Ensembl chr16:67,459,190...67,496,324 		JBrowse link
G Kynu kynureninase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:48,188,286...48,338,996
Ensembl chr 3:27,778,772...27,929,488 		JBrowse link
G Tdo2 tryptophan 2,3-dioxygenase involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000104
GO_REF:0000107
GO_REF:0000002
(PMID:27762317)
GO_REF:0000041		 UniProt
Ensembl
InterPro
RGD		 PMID:27762317 GO_REF:0000002 GO_REF:0000024 GO_REF:0000041 GO_REF:0000104 GO_REF:0000107 NCBI chr 2:169,567,656...169,585,586
Ensembl chr 2:167,269,579...167,287,511 		JBrowse link
lactate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ldhd lactate dehydrogenase D involved_in ISO
IEA
IBA		 (PMID:30931947)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:30931947 GO_REF:0000033 GO_REF:0000107 NCBI chr19:56,492,827...56,497,695
Ensembl chr19:39,573,621...39,595,575 		JBrowse link
leukotriene B4 catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp4f1 cytochrome P450, family 4, subfamily f, polypeptide 1 involved_in IDA
IBA		 PMID:14634044
GO_REF:0000033
PMID:10486137		 GO_Central PMID:14634044 PMID:10486137 GO_REF:0000033, RGD:2301710, RGD:2301713 NCBI chr 7:12,661,357...12,672,952
Ensembl chr 7:12,010,852...12,022,046 		JBrowse link
G Cyp4f18 cytochrome P450, family 4, subfamily f, polypeptide 18 involved_in ISO
IBA		 (PMID:11461919), (PMID:9675028)
GO_REF:0000033		 RGD
GO_Central		 PMID:9675028 PMID:11461919 GO_REF:0000033 NCBI chr16:17,797,558...17,838,958
Ensembl chr16:17,707,317...17,804,940 		JBrowse link
G Cyp4f4 cytochrome P450, family 4, subfamily f, polypeptide 4 involved_in IDA
IBA		 PMID:9344476
GO_REF:0000033
PMID:14634044		 GO_Central PMID:9344476 PMID:14634044 GO_REF:0000033, RGD:15090848, RGD:2301710 NCBI chr 7:12,367,711...12,384,010
Ensembl chr 7:11,717,208...11,733,506 		JBrowse link
G Cyp4f40 cytochrome P450, family 4, subfamily f, polypeptide 40 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:11,691,648...11,707,437
Ensembl chr 7:11,692,086...11,706,229 		JBrowse link
leukotriene D4 catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpep1 dipeptidase 1 involved_in ISO
IEA
ISS		 (PMID:32325220)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:32325220 GO_REF:0000024 GO_REF:0000107 NCBI chr19:68,118,270...68,143,781
Ensembl chr19:51,219,660...51,235,257 		JBrowse link
G Dpep2 dipeptidase 2 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:32325220)		 UniProt
Ensembl
RGD		 PMID:32325220 GO_REF:0000024 GO_REF:0000107 NCBI chr19:50,795,322...50,806,320
Ensembl chr19:33,885,478...33,891,954 		JBrowse link
long-chain fatty acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP binding cassette subfamily D member 1 involved_in ISO
ISS		 UniProtKB:P34230 (PMID:18757502), (PMID:23671276)
GO_REF:0000024		 RGD
UniProt		 PMID:18757502 PMID:23671276 GO_REF:0000024 NCBI chr  X:156,579,669...156,601,448
Ensembl chr  X:151,428,578...151,450,115 		JBrowse link
G Acadl acyl-CoA dehydrogenase, long chain involved_in IDA
IBA
IEA		 GO_REF:0000033
GO_REF:0000002		 GO_Central
InterPro
RGD		 PMID:3968063 GO_REF:0000002 GO_REF:0000033, RGD:2317678 NCBI chr 9:75,783,689...75,822,077
Ensembl chr 9:68,333,980...68,372,220 		JBrowse link
G Adtrp androgen-dependent TFPI-regulating protein involved_in ISO
IEA		 (PMID:27018888)
GO_REF:0000107		 RGD
Ensembl		 PMID:27018888 GO_REF:0000107 NCBI chr17:23,113,578...23,199,616
Ensembl chr17:22,930,740...22,993,826 		JBrowse link
G Aig1 androgen-induced 1 involved_in ISO
IEA		 (PMID:27018888)
GO_REF:0000107		 RGD
Ensembl		 PMID:27018888 GO_REF:0000107 NCBI chr 1:8,046,430...8,269,276
Ensembl chr 1:8,046,430...8,269,084 		JBrowse link
G Lipe lipase E, hormone sensitive type acts_upstream_of_or_within ISO (PMID:16804080) RGD PMID:16804080 NCBI chr 1:90,093,433...90,112,117
Ensembl chr 1:80,965,627...80,984,310 		JBrowse link
lysine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aass aminoadipate-semialdehyde synthase involved_in ISS
ISO		 GO_REF:0000024
(PMID:10775527)		 UniProt
RGD		 PMID:10775527 GO_REF:0000024 NCBI chr 4:52,572,146...52,628,811
Ensembl chr 4:51,606,462...51,663,136 		JBrowse link
malonate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acsf3 acyl-CoA synthetase family member 3 involved_in ISO
IEA		 (PMID:21642549), (PMID:21846720)
GO_REF:0000107		 RGD
Ensembl		 PMID:21642549 PMID:21846720 GO_REF:0000107 NCBI chr19:50,835,116...50,875,557
Ensembl chr19:50,835,221...50,875,553 		JBrowse link
medium-chain fatty acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd1 abhydrolase domain containing 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:25,422,526...25,427,514
Ensembl chr 6:25,422,526...25,427,514 		JBrowse link
G Abhd2 abhydrolase domain containing 2, acylglycerol lipase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:142,626,748...142,707,892
Ensembl chr 1:133,217,375...133,299,061 		JBrowse link
G Abhd3 abhydrolase domain containing 3, phospholipase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:1,996,010...2,051,311
Ensembl chr18:1,720,718...1,803,428 		JBrowse link
G Acadm acyl-CoA dehydrogenase medium chain involved_in IDA
IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
(PMID:1970566)		 GO_Central
Ensembl
RGD		 PMID:1970566 PMID:3968063 GO_REF:0000033 GO_REF:0000107, RGD:2317678 NCBI chr 2:245,518,693...245,542,864
Ensembl chr 2:242,858,865...242,883,147 		JBrowse link
methionine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mat1a methionine adenosyltransferase 1A involved_in ISO
ISS		 (PMID:10677294)
GO_REF:0000024		 RGD
UniProt		 PMID:10677294 GO_REF:0000024 NCBI chr16:17,017,168...17,035,368
Ensembl chr16:16,983,022...17,001,274 		JBrowse link
N(omega),N(omega)-dimethyl-L-arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt2 alanine-glyoxylate aminotransferase 2 involved_in IDA PMID:2123486 UniProt PMID:2123486 RGD:401901222 NCBI chr 2:61,063,416...61,104,828
Ensembl chr 2:59,336,283...59,377,926 		JBrowse link
N-acetylneuraminate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amdhd2 amidohydrolase domain containing 2 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr10:13,187,579...13,196,148
Ensembl chr10:13,187,578...13,196,095 		JBrowse link
G Gnpda1 glucosamine-6-phosphate deaminase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:30,416,599...30,428,630
Ensembl chr18:30,165,427...30,177,486 		JBrowse link
G Gnpda2 glucosamine-6-phosphate deaminase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:38,520,663...38,538,713
Ensembl chr14:38,520,705...38,538,713 		JBrowse link
G Nagk N-acetylglucosamine kinase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 4:117,838,761...117,846,304
Ensembl chr 4:116,281,328...116,313,137 		JBrowse link
G Npl N-acetylneuraminate pyruvate lyase involved_in IEA
IBA
ISO
ISS		 GO_REF:0000041
GO_REF:0000107
GO_REF:0000033
(PMID:11737202)
(PMID:33895133)
GO_REF:0000024		 UniProt
Ensembl
GO_Central
RGD		 PMID:11737202 PMID:33895133 GO_REF:0000024 GO_REF:0000033 GO_REF:0000041 GO_REF:0000107 NCBI chr13:68,205,602...68,247,940
Ensembl chr13:65,655,118...65,697,372 		JBrowse link
G Renbp renin binding protein involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr  X:156,812,785...156,821,860
Ensembl chr  X:151,661,458...151,670,516 		JBrowse link
negative regulation of arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 involved_in ISO
IEA		 (PMID:19278978)
GO_REF:0000107		 RGD
Ensembl		 PMID:19278978 GO_REF:0000107 NCBI chr13:47,708,157...47,807,389
Ensembl chr13:45,156,146...45,255,246 		JBrowse link
negative regulation of fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acacb acetyl-CoA carboxylase beta involved_in ISO
IEA		 (PMID:12920182), (PMID:15677334)
GO_REF:0000107		 RGD
Ensembl		 PMID:12920182 PMID:15677334 GO_REF:0000107 NCBI chr12:48,026,394...48,138,214
Ensembl chr12:42,366,548...42,457,655 		JBrowse link
G Akt1 AKT serine/threonine kinase 1 involved_in ISO
IEA		 (PMID:16814735)
GO_REF:0000107		 RGD
Ensembl		 PMID:16814735 GO_REF:0000107 NCBI chr 6:137,534,810...137,555,131
Ensembl chr 6:131,713,720...131,733,921 		JBrowse link
G Cnr1 cannabinoid receptor 1 IMP RGD PMID:19724020 RGD:2314644 NCBI chr 5:53,204,867...53,230,396
Ensembl chr 5:48,408,574...48,435,099 		JBrowse link
G Dbi diazepam binding inhibitor IDA RGD PMID:11485163 RGD:2316274 NCBI chr13:33,794,231...33,802,632
Ensembl chr13:31,206,988...31,268,693 		JBrowse link
G Mfsd2a MFSD2 lysolipid transporter A, lysophospholipid acts_upstream_of_or_within ISO
IEA		 (PMID:23209793)
GO_REF:0000107		 RGD
Ensembl		 PMID:23209793 GO_REF:0000107 NCBI chr 5:140,510,933...140,525,828
Ensembl chr 5:135,225,816...135,240,690 		JBrowse link
G Pink1 PTEN induced kinase 1 HMP RGD PMID:25421206 RGD:11560775 NCBI chr 5:155,813,838...155,825,950
Ensembl chr 5:150,530,523...150,542,635 		JBrowse link
G Plin5 perilipin 5 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:21885430), (PMID:22532565), (PMID:22675471)		 UniProt
Ensembl
RGD		 PMID:21885430 PMID:22532565 PMID:22675471 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:939,745...946,188
Ensembl chr 9:939,747...946,120 		JBrowse link
negative regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Etfbkmt electron transfer flavoprotein subunit beta lysine methyltransferase involved_in ISO
IEA
IBA
ISS		 (PMID:25416781)
GO_REF:0000107
GO_REF:0000033
(PMID:25023281)
GO_REF:0000024		 RGD
Ensembl
GO_Central
UniProt		 PMID:25023281 PMID:25416781 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:182,140,492...182,204,635
Ensembl chr 4:182,140,559...182,150,305 		JBrowse link
negative regulation of ornithine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Oaz1 ornithine decarboxylase antizyme 1 IDA RGD PMID:8166639 RGD:401851045 NCBI chr 7:9,534,530...9,536,990
Ensembl chr 7:8,883,851...8,886,310 		JBrowse link
ornithine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Otc ornithine transcarbamylase involved_in ISO
IEA		 (PMID:2556444), (PMID:8112735)
GO_REF:0000107		 RGD
Ensembl		 PMID:2556444 PMID:8112735 GO_REF:0000107 NCBI chr  X:15,126,358...15,202,473
Ensembl chr  X:12,453,834...12,566,918 		JBrowse link
phenylacetate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acaa1a acetyl-CoA acyltransferase 1A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:127,956,126...127,966,348
Ensembl chr 8:119,079,775...119,088,624 		JBrowse link
G Acaa1b acetyl-Coenzyme A acyltransferase 1B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:127,750,771...127,759,589
Ensembl chr 8:118,872,997...118,881,825 		JBrowse link
G Pon3 paraoxonase 3 IDA RGD PMID:12946270 RGD:1303961 NCBI chr 4:34,323,546...34,350,244
Ensembl chr 4:33,349,168...33,383,855 		JBrowse link
positive regulation of fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP binding cassette subfamily D member 1 involved_in ISO
ISS		 (PMID:23123468)
(PMID:18723473), (PMID:18854420), (PMID:23123468)
GO_REF:0000024		 RGD
UniProt		 PMID:18723473 PMID:18854420 PMID:23123468 GO_REF:0000024 NCBI chr  X:156,579,669...156,601,448
Ensembl chr  X:151,428,578...151,450,115 		JBrowse link
G Abcd2 ATP binding cassette subfamily D member 2 involved_in ISO
IEA
ISS		 (PMID:10196381)
GO_REF:0000107
(PMID:18723473), (PMID:18854420)
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:10196381 PMID:18723473 PMID:18854420 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:124,142,597...124,191,202
Ensembl chr 7:122,263,032...122,311,642 		JBrowse link
G Acsl5 acyl-CoA synthetase long-chain family member 5 IGI RGD PMID:14711823 RGD:2312802 NCBI chr 1:264,294,851...264,341,943
Ensembl chr 1:254,292,521...254,336,607 		JBrowse link
G Akt2 AKT serine/threonine kinase 2 involved_in ISO
IEA		 (PMID:16814735)
GO_REF:0000107		 RGD
Ensembl		 PMID:16814735 GO_REF:0000107 NCBI chr 1:92,004,705...92,061,420
Ensembl chr 1:82,883,547...82,933,817 		JBrowse link
G Cpt1a carnitine palmitoyltransferase 1A IMP RGD PMID:19302064 RGD:2311346 NCBI chr 1:209,993,881...210,056,329
Ensembl chr 1:200,565,613...200,627,055 		JBrowse link
G Fabp1 fatty acid binding protein 1 IDA peroxisomal RGD PMID:16262600 RGD:1626442 NCBI chr 4:104,744,302...104,753,119
Ensembl chr 4:103,191,006...103,194,788 		JBrowse link
G Irs1 insulin receptor substrate 1 involved_in ISO (PMID:16814735) RGD PMID:16814735 NCBI chr 9:91,001,137...91,053,959
Ensembl chr 9:83,548,944...83,606,122 		JBrowse link
G Irs2 insulin receptor substrate 2 involved_in ISO
IEA		 (PMID:16814735)
GO_REF:0000107		 RGD
Ensembl		 PMID:16814735 GO_REF:0000107 NCBI chr16:85,190,310...85,214,543
Ensembl chr16:78,485,045...78,512,482 		JBrowse link
G Mtln mitoregulin involved_in ISO (PMID:29949755) RGD PMID:29949755 NCBI chr 3:115,018,810...115,019,668
Ensembl chr 3:115,019,473...115,019,643
Ensembl chr 3:115,019,473...115,019,643 		JBrowse link
G Obp2a odorant binding protein 2A acts_upstream_of_or_within ISO (PMID:21908604) RGD PMID:21908604 NCBI chr 3:8,505,963...8,509,269
Ensembl chr 3:8,505,990...8,509,269 		JBrowse link
G Plin5 perilipin 5 involved_in IDA
IEA
ISO		 PMID:22127648
GO_REF:0000107
(PMID:17130488)		 Ensembl
RGD		 PMID:17130488 PMID:22127648 GO_REF:0000107, RGD:8553692 NCBI chr 9:939,745...946,188
Ensembl chr 9:939,747...946,120 		JBrowse link
G Twist1 twist family bHLH transcription factor 1 involved_in ISO (PMID:20007935) RGD PMID:20007935 NCBI chr 6:56,402,309...56,404,303
Ensembl chr 6:50,674,678...50,677,653 		JBrowse link
proline catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino-acid oxidase involved_in ISO
IEA
IBA		 (PMID:16616139)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:16616139 GO_REF:0000033 GO_REF:0000107 NCBI chr12:48,252,900...48,275,964
Ensembl chr12:42,592,343...42,612,741 		JBrowse link
G Prodh proline dehydrogenase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr11:82,910,043...82,927,305
Ensembl chr11:82,910,137...82,927,305 		JBrowse link
G Prodh2 proline dehydrogenase 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:94,881,000...94,894,609
Ensembl chr 1:85,753,644...85,767,162 		JBrowse link
proline catabolic process to glutamate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh4a1 aldehyde dehydrogenase 4 family, member A1 involved_in IEA GO_REF:0000041
GO_REF:0000002
GO_REF:0000104		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000104 NCBI chr 5:157,163,189...157,188,673
Ensembl chr 5:151,830,701...151,925,345 		JBrowse link
G Iffo2 intermediate filament family orphan 2 involved_in IEA GO_REF:0000041
GO_REF:0000002
GO_REF:0000104		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000104 NCBI chr 5:151,830,900...151,876,948
Ensembl chr 5:151,830,701...151,925,345 		JBrowse link
G Prodh proline dehydrogenase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:82,910,043...82,927,305
Ensembl chr11:82,910,137...82,927,305 		JBrowse link
G Prodh2 proline dehydrogenase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:94,881,000...94,894,609
Ensembl chr 1:85,753,644...85,767,162 		JBrowse link
G Tas1r2 taste 1 receptor member 2 involved_in IEA GO_REF:0000041
GO_REF:0000002
GO_REF:0000104		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000104 NCBI chr 5:157,192,799...157,208,937
Ensembl chr 5:151,830,701...151,925,345 		JBrowse link
propionate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pck1 phosphoenolpyruvate carboxykinase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:182,348,572...182,354,521
Ensembl chr 3:161,930,256...161,936,191 		JBrowse link
G Pck2 phosphoenolpyruvate carboxykinase 2 (mitochondrial) involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:32,997,853...33,006,691
Ensembl chr15:29,027,894...29,037,283 		JBrowse link
pyruvate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlat dihydrolipoamide S-acetyltransferase involved_in ISO
IEA		 (PMID:27621431)
GO_REF:0000107		 RGD
Ensembl		 PMID:27621431 GO_REF:0000107 NCBI chr 8:59,875,537...59,900,947
Ensembl chr 8:50,978,051...51,004,479
Ensembl chr 1:50,978,051...51,004,479 		JBrowse link
G Kyat1 kynurenine aminotransferase 1 IDA RGD PMID:7796908 RGD:9685040 NCBI chr 3:33,857,407...33,891,153
Ensembl chr 3:13,459,591...13,493,355 		JBrowse link
G Ldha lactate dehydrogenase A involved_in ISO MGI:2384559 (PMID:21041631), (PMID:8224816) RGD PMID:8224816 PMID:21041631 NCBI chr 1:106,508,092...106,517,512
Ensembl chr 1:97,366,021...97,433,472 		JBrowse link
G Ldhc lactate dehydrogenase C involved_in ISO
IEA		 MGI:3775042 (PMID:21565994)
GO_REF:0000107		 RGD
Ensembl		 PMID:21565994 GO_REF:0000107 NCBI chr 1:106,522,140...106,539,649
Ensembl chr 1:97,382,379...97,403,378 		JBrowse link
G Slc16a1 solute carrier family 16 member 1 involved_in ISO
IEA		 (PMID:29026134)
GO_REF:0000107		 RGD
Ensembl		 PMID:29026134 GO_REF:0000107 NCBI chr 2:194,805,556...194,832,966
Ensembl chr 2:192,124,289...192,144,611 		JBrowse link
G Slc16a3 solute carrier family 16 member 3 involved_in ISO
IEA		 MGI:6467009 (PMID:31837519)
GO_REF:0000107		 RGD
Ensembl		 PMID:31837519 GO_REF:0000107 NCBI chr10:106,712,328...106,756,168
Ensembl chr10:106,212,778...106,222,562 		JBrowse link
quinolinate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Qprt quinolinate phosphoribosyltransferase involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:24038671), (PMID:3409840), (PMID:9473669)
GO_REF:0000033
(PMID:9473669)		 RGD
GO_Central		 PMID:3409840 PMID:9473669 PMID:24038671 GO_REF:0000033 NCBI chr 1:181,718,189...181,733,486
Ensembl chr 1:181,718,190...181,733,486 		JBrowse link
regulation of fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb11 ATP binding cassette subfamily B member 11 involved_in ISS
ISO		 GO_REF:0000024
(PMID:22619174)		 UniProt
RGD		 PMID:22619174 GO_REF:0000024 NCBI chr 3:74,424,620...74,520,646
Ensembl chr 3:54,017,127...54,112,730 		JBrowse link
G Abcd1 ATP binding cassette subfamily D member 1 involved_in ISO (PMID:25255441), (PMID:9126326), (PMID:9256488), (PMID:9418970) RGD PMID:9126326 PMID:9256488 PMID:9418970 PMID:25255441 NCBI chr  X:156,579,669...156,601,448
Ensembl chr  X:151,428,578...151,450,115 		JBrowse link
G Cpt1a carnitine palmitoyltransferase 1A TAS RGD PMID:11087756 RGD:1600733 NCBI chr 1:209,993,881...210,056,329
Ensembl chr 1:200,565,613...200,627,055 		JBrowse link
G Lonp2 lon peptidase 2, peroxisomal involved_in ISO
IEA		 (PMID:22002062)
GO_REF:0000107		 RGD
Ensembl		 PMID:22002062 GO_REF:0000107 NCBI chr19:36,580,736...36,672,242
Ensembl chr19:20,407,477...20,499,014 		JBrowse link
G Mlycd malonyl-CoA decarboxylase IDA RGD PMID:10516138 RGD:1600797 NCBI chr19:64,356,582...64,372,447
Ensembl chr19:47,447,970...47,463,793 		JBrowse link
G Mtor mechanistic target of rapamycin kinase IDA
IMP		 RGD PMID:17142137 PMID:17142137 RGD:1625611, RGD:1625611 NCBI chr 5:164,167,985...164,277,438
Ensembl chr 5:158,884,804...158,994,311 		JBrowse link
G Tysnd1 trypsin like peroxisomal matrix peptidase 1 involved_in ISS
IEA
IBA
ISO		 GO_REF:0000024
GO_REF:0000107
GO_REF:0000033
(PMID:22002062)		 UniProt
Ensembl
GO_Central
RGD		 PMID:22002062 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr20:29,637,942...29,646,492
Ensembl chr20:29,638,277...29,643,995 		JBrowse link
retinoic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp26a1 cytochrome P450, family 26, subfamily a, polypeptide 1 involved_in ISO
IEA
IBA		 (PMID:10823918)
GO_REF:0000107
GO_REF:0000117
GO_REF:0000033
(PMID:9250660)		 RGD
Ensembl
UniProt
GO_Central		 PMID:9250660 PMID:10823918 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 NCBI chr 1:244,883,822...244,887,657
Ensembl chr 1:235,471,298...235,475,204 		JBrowse link
G Cyp26b1 cytochrome P450, family 26, subfamily b, polypeptide 1 involved_in IMP
IEA
IBA
ISO		 GO_REF:0000107
GO_REF:0000033
GO_REF:0000117
(PMID:10823918)		 Ensembl
GO_Central
UniProt
RGD		 PMID:10823918 PMID:21138835 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117, RGD:6771354 NCBI chr 4:118,599,356...118,616,176
Ensembl chr 4:117,041,808...117,058,628 		JBrowse link
G Cyp26c1 cytochrome P450, family 26, subfamily C, polypeptide 1 involved_in ISO
IEA
IBA		 (PMID:14532297)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:14532297 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:244,870,412...244,881,610
Ensembl chr 1:235,459,356...235,466,842 		JBrowse link
G Cyp2w1 cytochrome P450, family 2, subfamily w, polypeptide 1 involved_in ISO
IEA		 (PMID:26936974)
GO_REF:0000107		 RGD
Ensembl		 PMID:26936974 GO_REF:0000107 NCBI chr12:15,291,552...15,296,421
Ensembl chr12:15,291,704...15,296,421 		JBrowse link
S-adenosylhomocysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahcy adenosylhomocysteinase acts_upstream_of_or_within IDA
ISO		 (PMID:12023972) RGD PMID:12023972 PMID:11741948 RGD:730275 NCBI chr 3:164,029,338...164,044,562
Ensembl chr 3:143,569,094...143,584,393 		JBrowse link
sarcosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sardh sarcosine dehydrogenase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:30,908,621...30,973,409
Ensembl chr 3:10,510,553...10,573,874 		JBrowse link
selenocysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Scly selenocysteine lyase involved_in IMP PMID:20164179 CAFA PMID:20164179 RGD:12793035 NCBI chr 9:99,337,796...99,358,487
Ensembl chr 9:91,890,306...91,910,941 		JBrowse link
serine family amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Thnsl2 threonine synthase-like 2 involved_in IBA
ISO		 GO_REF:0000033
(PMID:17034760)		 GO_Central
RGD		 PMID:17034760 GO_REF:0000033 NCBI chr 4:104,671,305...104,691,084
Ensembl chr 4:103,112,963...103,132,017 		JBrowse link
short-chain fatty acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ces1d carboxylesterase 1D acts_upstream_of_or_within ISO (PMID:16804080) RGD PMID:16804080 NCBI chr19:30,046,494...30,085,039
Ensembl chr19:13,796,623...13,912,035 		JBrowse link
threonine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gcat glycine C-acetyltransferase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:112,475,572...112,481,920
Ensembl chr 7:110,595,091...110,601,473 		JBrowse link
G Tdh L-threonine dehydrogenase involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
(PMID:26492815)
(PMID:21896756)		 GO_Central
Ensembl
RGD		 PMID:21896756 PMID:26492815 GO_REF:0000033 GO_REF:0000107 NCBI chr15:37,739,823...37,753,365
Ensembl chr15:37,739,823...37,753,365 		JBrowse link
G Tha1 threonine aldolase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:103,593,363...103,598,851
Ensembl chr10:103,094,681...103,100,519 		JBrowse link
tyrosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fah fumarylacetoacetate hydrolase involved_in IEA
IBA		 GO_REF:0000104
GO_REF:0000043
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000043 GO_REF:0000104 NCBI chr 1:138,548,830...138,571,599
Ensembl chr 1:138,548,834...138,571,505 		JBrowse link
G Gstz1 glutathione S-transferase zeta 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 6:112,525,576...112,536,228
Ensembl chr 6:106,794,074...106,805,284 		JBrowse link
G Hpd 4-hydroxyphenylpyruvate dioxygenase involved_in
acts_upstream_of_or_within		 TAS
IEA
IBA
ISO
IDA		 GO_REF:0000043
GO_REF:0000033
(PMID:31537781)
PMID:8814303		 UniProt
GO_Central
RGD		 PMID:31537781 PMID:12867153 PMID:8814303 GO_REF:0000033 GO_REF:0000043, RGD:632936, RGD:8554707 NCBI chr12:33,381,397...33,392,750
Ensembl chr12:33,381,231...33,392,766 		JBrowse link
G Il4i1 interleukin 4 induced 1 involved_in ISO (PMID:17356132) RGD PMID:17356132 NCBI chr 1:104,435,540...104,461,049
Ensembl chr 1:95,295,601...95,324,562 		JBrowse link
G Tat tyrosine aminotransferase involved_in ISO
IEA
IBA
ISS		 (PMID:7999802)
GO_REF:0000107
GO_REF:0000043
(PMID:21153519)
GO_REF:0000033
GO_REF:0000024		 RGD
Ensembl
UniProt
GO_Central		 PMID:7999802 PMID:21153519 GO_REF:0000024 GO_REF:0000033 GO_REF:0000043 GO_REF:0000107 NCBI chr19:54,856,604...54,867,168
Ensembl chr19:37,947,112...37,958,031 		JBrowse link
valine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh6a1 aldehyde dehydrogenase 6 family, member A1 involved_in IDA
IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
(PMID:23835272)		 GO_Central
Ensembl
RGD		 PMID:23835272 PMID:2768248 GO_REF:0000033 GO_REF:0000107, RGD:1599052 NCBI chr 6:109,809,092...109,829,725
Ensembl chr 6:104,077,979...104,098,656 		JBrowse link
G Bckdk branched chain ketoacid dehydrogenase kinase IMP RGD PMID:27472223 RGD:39131293 NCBI chr 1:191,945,809...191,950,480
Ensembl chr 1:182,515,327...182,536,633 		JBrowse link
G Hibadh 3-hydroxyisobutyrate dehydrogenase involved_in IEA
IBA
ISS
ISO		 GO_REF:0000041
GO_REF:0000107
GO_REF:0000033
GO_REF:0000024
(PMID:16466957)		 UniProt
Ensembl
GO_Central
RGD		 PMID:16466957 GO_REF:0000024 GO_REF:0000033 GO_REF:0000041 GO_REF:0000107 NCBI chr 4:82,979,759...83,077,819
Ensembl chr 4:81,649,175...81,780,617 		JBrowse link
G Hibch 3-hydroxyisobutyryl-CoA hydrolase involved_in IEA
IBA		 GO_REF:0000041
GO_REF:0000104
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000041 GO_REF:0000104 NCBI chr 9:56,082,082...56,161,796
Ensembl chr 9:48,590,099...48,669,824 		JBrowse link
very long-chain fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acox1 acyl-CoA oxidase 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:32169171)		 Ensembl
RGD		 PMID:32169171 GO_REF:0000107 NCBI chr10:101,905,083...101,930,136
Ensembl chr10:101,406,197...101,431,232 		JBrowse link
very long-chain fatty acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP binding cassette subfamily D member 1 involved_in ISO
IBA
ISS
IMP		 UniProtKB:P34230|UniProtKB:P41909 (PMID:18757502), (PMID:21145416), (PMID:9425230)
(PMID:18723473)
GO_REF:0000033
GO_REF:0000024
PMID:25043761		 RGD
GO_Central
UniProt		 PMID:9425230 PMID:18723473 PMID:18757502 PMID:21145416 PMID:25043761 GO_REF:0000024 GO_REF:0000033, RGD:13673760 NCBI chr  X:156,579,669...156,601,448
Ensembl chr  X:151,428,578...151,450,115 		JBrowse link
G Abcd2 ATP binding cassette subfamily D member 2 involved_in IMP
IEA
ISO
IBA
ISS		 PMID:25043761
GO_REF:0000107
(PMID:18723473)
GO_REF:0000033
GO_REF:0000024
UniProtKB:P41909 (PMID:21145416)		 Ensembl
RGD
GO_Central
UniProt		 PMID:18723473 PMID:21145416 PMID:25043761 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107, RGD:13673760 NCBI chr 7:124,142,597...124,191,202
Ensembl chr 7:122,263,032...122,311,642 		JBrowse link
G Abcd3 ATP binding cassette subfamily D member 3 involved_in ISO
IEA
IBA		 UniProtKB:P33897 (PMID:9425230)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:9425230 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:212,536,791...212,590,379
Ensembl chr 2:209,852,087...209,906,020 		JBrowse link
G Slc27a2 solute carrier family 27 member 2 acts_upstream_of_or_within ISO
IEA		 MGI:2663647 (PMID:12719378)
GO_REF:0000107		 RGD
Ensembl		 PMID:12719378 GO_REF:0000107 NCBI chr 3:134,258,101...134,295,581
Ensembl chr 3:113,804,728...113,842,208 		JBrowse link
G Slc27a4 solute carrier family 27 member 4 acts_upstream_of_or_within ISO
IEA		 (PMID:17522045)
GO_REF:0000107		 RGD
Ensembl		 PMID:17522045 GO_REF:0000107 NCBI chr 3:33,472,903...33,485,824
Ensembl chr 3:13,075,022...13,087,943 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20558
    cellular process 19550
      metabolic process 12180
        small molecule metabolic process 1928
          organic acid metabolic process 1048
            organic acid catabolic process 247
              2-aminobenzenesulfonate catabolic process 0
              6-sulfoquinovose(1-) catabolic process + 0
              alkanesulfonate catabolic process + 0
              carboxylic acid catabolic process + 247
              toluene-4-sulfonate catabolic process 0
paths to the root