ONTOLOGY REPORT - ANNOTATIONS
Term: gastro-intestinal system smooth muscle contraction
Accession: GO:0014831
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Definition: A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the gastro-intestinal system. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The gastro-intestinal system generally refers to the digestive structures stretching from the mouth to anus, but does not include the accessory glandular organs (liver, pancreas and biliary tract).
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Sulf1
sulfatase 1
involved_in
IEA ISO ISS
GO_REF:0000104 UniProtKB:Q8CFG0 (PMID:17720696) GO_REF:0000024
UniProt RGD
PMID:17720696
GO_REF:0000024 GO_REF:0000104
NCBI chr 5:11,145,950...11,308,622
Ensembl chr 5:6,362,911...6,525,584
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Sulf2
sulfatase 2
involved_in
ISO
UniProtKB:Q8K007 (PMID:17720696)
RGD
PMID:17720696
NCBI chr 3:175,241,322...175,323,808
Ensembl chr 3:154,822,085...154,904,415
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Htr1d
5-hydroxytryptamine receptor 1D
involved_in
ISO
(PMID:9186750)
RGD
PMID:9186750
NCBI chr 5:148,656,252...148,676,532
Ensembl chr 5:148,674,495...148,675,619
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Htr2b
5-hydroxytryptamine receptor 2B
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:7599919), (PMID:9186750) GO_REF:0000107
UniProt RGD Ensembl
PMID:7599919 PMID:9186750
GO_REF:0000024 GO_REF:0000107
NCBI chr 9:94,184,442...94,206,851
Ensembl chr 9:86,742,102...86,755,108
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Ptger3
prostaglandin E receptor 3
involved_in
IMP IBA
GO_REF:0000033
GO_Central RGD
PMID:24170253
GO_REF:0000033, RGD:10043193
NCBI chr 2:249,264,985...249,409,966
Ensembl chr 2:246,606,183...246,684,434
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Tacr2
tachykinin receptor 2
IMP
RGD
PMID:11275010
RGD:5147481
NCBI chr20:30,751,645...30,766,181
Ensembl chr20:30,208,907...30,223,446
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Kcnma1
potassium calcium-activated channel subfamily M alpha 1
IMP
RGD
PMID:23647678
RGD:10412032
NCBI chr15:351,065...1,057,117
Ensembl chr15:302,214...1,001,198
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Ptger3
prostaglandin E receptor 3
IDA
RGD
PMID:11991626
RGD:10003093
NCBI chr 2:249,264,985...249,409,966
Ensembl chr 2:246,606,183...246,684,434
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Ptger4
prostaglandin E receptor 4
IDA
RGD
PMID:11991626
RGD:10003093
NCBI chr 2:56,061,699...56,074,594
Ensembl chr 2:54,335,424...54,346,670
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Kit
KIT proto-oncogene receptor tyrosine kinase
IMP
RGD
PMID:17322067
RGD:12910822
NCBI chr14:32,901,615...32,978,895
Ensembl chr14:32,548,877...32,624,652
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Ptger3
prostaglandin E receptor 3
IMP
RGD
PMID:24170253
RGD:10043193
NCBI chr 2:249,264,985...249,409,966
Ensembl chr 2:246,606,183...246,684,434
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Ghrl
ghrelin and obestatin prepropeptide
IDA
RGD
PMID:15890336
RGD:12907565
NCBI chr 4:148,421,315...148,431,128
Ensembl chr 4:146,865,712...146,869,621
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Ptafr
platelet-activating factor receptor
IMP
RGD
PMID:10821044
RGD:10043148
NCBI chr 5:150,049,322...150,079,060
Ensembl chr 5:144,765,976...144,795,251
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Spx
spexin hormone
involved_in
ISO IBA ISS
(PMID:17284679) GO_REF:0000033
RGD GO_Central
PMID:17284679 PMID:17284679
GO_REF:0000033, RGD:12907558
NCBI chr 4:177,087,053...177,093,091
Ensembl chr 4:175,356,247...175,362,082
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Kit
KIT proto-oncogene receptor tyrosine kinase
IMP
RGD
PMID:9832052
RGD:12910753
NCBI chr14:32,901,615...32,978,895
Ensembl chr14:32,548,877...32,624,652
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Ghrl
ghrelin and obestatin prepropeptide
IDA
RGD
PMID:15890336 PMID:21874246
RGD:12907565 , RGD:12910732
NCBI chr 4:148,421,315...148,431,128
Ensembl chr 4:146,865,712...146,869,621
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Ghsr
growth hormone secretagogue receptor
IMP
RGD
PMID:21874246 PMID:15890336
RGD:12910732 , RGD:12907565
NCBI chr 2:112,196,158...112,201,666
Ensembl chr 2:110,268,489...110,271,865
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Kit
KIT proto-oncogene receptor tyrosine kinase
IMP
RGD
PMID:7542218
RGD:12910748
NCBI chr14:32,901,615...32,978,895
Ensembl chr14:32,548,877...32,624,652
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Nmu
neuromedin U
involved_in
IDA
PMID:2055247
UniProt
PMID:2055247
RGD:13461751
NCBI chr14:32,198,789...32,226,397
Ensembl chr14:31,844,728...31,872,192
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Scn11a
sodium voltage-gated channel alpha subunit 11
involved_in
IEA ISO
GO_REF:0000107 MGI:5558025 (PMID:32817686)
Ensembl RGD
PMID:32817686
GO_REF:0000107
NCBI chr 8:128,374,441...128,444,718
Ensembl chr 8:119,496,769...119,567,044
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