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ONTOLOGY REPORT - ANNOTATIONS


Term:negative regulation of gene expression
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Accession:GO:0010629 term browser browse the term
Definition:Any process that decreases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product (protein or RNA).
Comment:This term covers any process that negatively regulates the rate of production of a mature gene product, and so includes processes that negatively regulate that rate by reducing the level, stability or availability of intermediates in the process of gene expression. For example, it covers any process that reduces the level, stability or availability of mRNA or circRNA for translation and thereby reduces the rate of production of the encoded protein via translation.
Synonyms:related_synonym: gene silencing



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negative regulation of gene expression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc2 ATP binding cassette subfamily C member 2 involved_in IMP PMID:17437408 ARUK-UCL PMID:17437408 RGD:14929203 NCBI chr 1:242,664,657...242,723,239
Ensembl chr 1:242,664,657...242,723,238
JBrowse link
G Ace angiotensin I converting enzyme involved_in IEA
ISO
GO_REF:0000107
(PMID:25017399)
Ensembl
RGD
PMID:25017399 GO_REF:0000107 NCBI chr10:90,910,316...90,930,437
Ensembl chr10:90,910,316...90,931,131
JBrowse link
G Acvr1b activin A receptor type 1B involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:23152446)
Ensembl
RGD
PMID:23152446 GO_REF:0000107 NCBI chr 7:132,286,266...132,329,679
Ensembl chr 7:132,286,275...132,329,673
JBrowse link
G Acvrl1 activin A receptor like type 1 involved_in ISO (PMID:12941632) RGD PMID:12941632 NCBI chr 7:132,239,200...132,256,592
Ensembl chr 7:132,239,729...132,256,591
JBrowse link
G Adam10 ADAM metallopeptidase domain 10 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:24530397)
GO_REF:0000107
RGD
Ensembl
PMID:24530397 GO_REF:0000107 NCBI chr 8:71,346,008...71,477,889
Ensembl chr 8:71,345,837...71,477,889
JBrowse link
G Adipor2 adiponectin receptor 2 IMP RGD PMID:29237572 RGD:24922203 NCBI chr 4:152,524,604...152,588,848
Ensembl chr 4:152,524,623...152,559,355
JBrowse link
G Adnp activity-dependent neuroprotector homeobox IDA p53 RGD PMID:15314252 RGD:2312780 NCBI chr 3:156,886,921...156,921,500
Ensembl chr 3:156,891,381...156,917,312
JBrowse link
G Aff2 ALF transcription elongation factor 2 acts_upstream_of_or_within ISO (PMID:23562910) RGD PMID:23562910 NCBI chr  X:147,928,130...148,432,484
Ensembl chr  X:147,928,407...148,429,995
JBrowse link
G Agt angiotensinogen involved_in ISO (PMID:24296617) RGD PMID:24296617 NCBI chr19:52,529,139...52,549,618
Ensembl chr19:52,529,185...52,540,977
JBrowse link
G Aif1 allograft inflammatory factor 1 IMP 10 proteins, including ADAM3 RGD PMID:16157606 RGD:2313017 NCBI chr20:3,646,784...3,652,670
Ensembl chr20:3,646,777...3,652,668
JBrowse link
G Akirin2 akirin 2 IMP MKP-1 RGD PMID:18460465 RGD:2306009 NCBI chr 5:49,108,231...49,122,566
Ensembl chr 5:49,108,220...49,122,568
JBrowse link
G Akt1 AKT serine/threonine kinase 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:19933931)
Ensembl
RGD
PMID:19933931 GO_REF:0000107 NCBI chr 6:131,713,716...131,735,319
Ensembl chr 6:131,713,720...131,733,921
JBrowse link
G Anapc2 anaphase promoting complex subunit 2 IMP Ppfia1 RGD PMID:17419996 RGD:14696670 NCBI chr 3:8,086,434...8,098,182
Ensembl chr 3:8,086,462...8,098,178
JBrowse link
G Anxa7 annexin A7 involved_in ISO (PMID:24007983) RGD PMID:24007983 NCBI chr15:3,821,798...3,849,659
Ensembl chr15:3,821,845...3,849,385
JBrowse link
G Apln apelin involved_in ISO RNAcentral:URS00000F0F49_9606|RNAcentral:URS00000F6E49_9606 (PMID:23263626) RGD PMID:23263626 NCBI chr  X:127,180,801...127,213,567
Ensembl chr  X:127,203,823...127,213,391
JBrowse link
G Aplnr apelin receptor acts_upstream_of ISO (PMID:23603510) RGD PMID:23603510 NCBI chr 3:70,217,407...70,221,052
Ensembl chr 3:70,217,385...70,221,050
JBrowse link
G Apoe apolipoprotein E involved_in ISO (PMID:18377911) RGD PMID:18377911 NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932
JBrowse link
G App amyloid beta precursor protein involved_in ISO
IEA
UniProtKB:P49768 (PMID:22198949), (PMID:27853422), (PMID:28008308), (PMID:29061364)
(PMID:26006083)
UniProtKB:P56704 (PMID:18234671)
GO_REF:0000107
RGD
Ensembl
PMID:18234671 PMID:22198949 PMID:26006083 PMID:27853422 PMID:28008308 More... GO_REF:0000107 NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561
JBrowse link
G Atoh8 atonal bHLH transcription factor 8 involved_in ISO (PMID:27780851) RGD PMID:27780851 NCBI chr 4:104,259,992...104,292,168
Ensembl chr 4:104,259,992...104,292,168
JBrowse link
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 involved_in ISO (PMID:25147342) RGD PMID:25147342 NCBI chr13:45,156,137...45,255,292
Ensembl chr13:45,156,146...45,255,246
JBrowse link
G Aurka aurora kinase A involved_in ISO
IEA
(PMID:28218735)
GO_REF:0000107
RGD
Ensembl
PMID:28218735 GO_REF:0000107 NCBI chr 3:161,128,309...161,144,524
Ensembl chr 3:161,128,313...161,144,390
JBrowse link
G Axin1 axin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:18076571)
Ensembl
RGD
PMID:18076571 GO_REF:0000107 NCBI chr10:15,163,477...15,215,615
Ensembl chr10:15,163,684...15,215,615
JBrowse link
G Bak1 BCL2-antagonist/killer 1 IMP p16, cyclin D1, COX 2 RGD PMID:18349538 RGD:2316126 NCBI chr20:5,100,480...5,109,669
Ensembl chr20:5,100,480...5,109,264
JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 acts_upstream_of_or_within ISO MGI:3521669 (PMID:18317593), (PMID:19150989) RGD PMID:18317593 PMID:19150989 NCBI chr19:10,909,653...10,944,998
Ensembl chr19:10,909,619...10,944,993
JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within ISO MGI:3045473 (PMID:18317593), (PMID:19150989) RGD PMID:18317593 PMID:19150989 NCBI chr 8:59,731,912...59,765,408
Ensembl chr 8:59,731,912...59,765,607
JBrowse link
G Bcl11a BCL11 transcription factor A acts_upstream_of_or_within ISO MGI:4358088 (PMID:19657335) RGD PMID:19657335 NCBI chr14:98,029,018...98,124,181
Ensembl chr14:98,030,461...98,124,180
JBrowse link
G Bmp2 bone morphogenetic protein 2 involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:28124060)
(PMID:15322112)
(PMID:23399447)
GO_REF:0000107
RGD
Ensembl
PMID:15322112 PMID:23399447 PMID:28124060 GO_REF:0000107 NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:11493558)
(PMID:28124060)
Ensembl
RGD
PMID:11493558 PMID:28124060 GO_REF:0000107 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within ISO (PMID:11854453) RGD PMID:11854453 NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616
JBrowse link
G Brip1 BRCA1 interacting DNA helicase 1 IDA RGD PMID:12511571 RGD:11251702 NCBI chr10:70,907,266...71,031,502
Ensembl chr10:70,907,371...71,030,324
JBrowse link
G C1qtnf3 C1q and TNF related 3 involved_in ISO (PMID:20952387) RGD PMID:20952387 NCBI chr 2:59,917,099...59,939,519
Ensembl chr 2:59,917,188...59,939,433
JBrowse link
G Ccdc3 coiled-coil domain containing 3 acts_upstream_of_or_within
involved_in
ISO
IBA
(PMID:28827783)
GO_REF:0000033
RGD
GO_Central
PMID:28827783 GO_REF:0000033 NCBI chr17:73,031,891...73,135,173
Ensembl chr17:73,035,045...73,135,337
JBrowse link
G Ccl3 C-C motif chemokine ligand 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:21403648)
UniProt
RGD
PMID:21403648 GO_REF:0000024 NCBI chr10:68,451,388...68,452,938
Ensembl chr10:68,451,388...68,452,938
JBrowse link
G Ccn2 cellular communication network factor 2 acts_upstream_of_or_within ISO MGI:2663631 (PMID:18597638) RGD PMID:18597638 NCBI chr 1:20,802,199...20,805,315
Ensembl chr 1:20,802,199...20,805,734
JBrowse link
G Ccnb1 cyclin B1 IMP c-mos RGD PMID:15291744 RGD:1578405 NCBI chr 2:31,912,190...31,921,163
Ensembl chr 2:31,912,193...31,921,172
JBrowse link
G Ccr1 C-C motif chemokine receptor 1 involved_in ISO (PMID:21403648) RGD PMID:21403648 NCBI chr 8:123,556,286...123,561,841 JBrowse link
G Ccr1l1 chemokine (C-C motif) receptor 1-like 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 8:123,589,997...123,613,767
Ensembl chr 8:123,589,621...123,612,687
JBrowse link
G Cd28 Cd28 molecule involved_in ISO
IEA
(PMID:23817958)
GO_REF:0000107
RGD
Ensembl
PMID:23817958 GO_REF:0000107 NCBI chr 9:62,166,324...62,194,674
Ensembl chr 9:62,166,192...62,194,685
JBrowse link
G Cd34 CD34 molecule involved_in ISO
ISS
(PMID:15969628)
GO_REF:0000024
RGD
UniProt
PMID:15969628 GO_REF:0000024 NCBI chr13:106,480,313...106,500,844
Ensembl chr13:106,480,043...106,499,832
JBrowse link
G Cd36 CD36 molecule involved_in IEA
ISO
GO_REF:0000107
(PMID:20978343)
Ensembl
RGD
PMID:20978343 GO_REF:0000107 NCBI chr 4:17,317,343...17,410,084
Ensembl chr 4:17,354,466...17,513,903
JBrowse link
G Cd3e CD3 epsilon subunit of T-cell receptor complex involved_in ISO (PMID:23817958) RGD PMID:23817958 NCBI chr 8:45,303,848...45,315,005
Ensembl chr 8:45,303,852...45,315,022
JBrowse link
G Cd46 CD46 molecule involved_in ISO (PMID:23086448) RGD PMID:23086448 NCBI chr13:106,575,586...106,606,325
Ensembl chr13:106,574,858...106,660,445
JBrowse link
G Cdc45 cell division cycle 45 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr11:82,185,427...82,210,630
Ensembl chr11:82,185,473...82,210,619
JBrowse link
G Cdk1 cyclin-dependent kinase 1 acts_upstream_of_or_within IMP PMID:28350193 ARUK-UCL PMID:28350193 RGD:40902962 NCBI chr20:19,266,226...19,281,417
Ensembl chr20:19,266,248...19,281,408
JBrowse link
G Cdkn1a cyclin-dependent kinase inhibitor 1A acts_upstream_of_or_within ISO MGI:1933751 (PMID:11981756) RGD PMID:11981756 NCBI chr20:7,149,177...7,159,727
Ensembl chr20:7,149,217...7,159,585
JBrowse link
G Celf1 CUGBP, Elav-like family member 1 acts_upstream_of_or_within ISO (PMID:27230130) RGD PMID:27230130 NCBI chr 3:76,924,591...76,999,429
Ensembl chr 3:76,924,613...76,999,426
JBrowse link
G Chd4 chromodomain helicase DNA binding protein 4 involved_in ISO UniProtKB:Q86VK4 (PMID:33301730), (PMID:33859416) RGD PMID:33301730 PMID:33859416 NCBI chr 4:157,898,503...157,931,632
Ensembl chr 4:157,899,391...157,931,541
JBrowse link
G Chek1_v2 checkpoint kinase 1, variant 2 IDA p53-mediated RGD PMID:11687578 RGD:70230
G Chmp1a charged multivesicular body protein 1A acts_upstream_of_or_within ISO (PMID:11559747) RGD PMID:11559747 NCBI chr19:51,238,153...51,246,433
Ensembl chr19:51,238,160...51,246,436
JBrowse link
G Cilp cartilage intermediate layer protein involved_in ISO (PMID:29167509) RGD PMID:29167509 NCBI chr 8:65,777,281...65,792,251
Ensembl chr 8:65,777,281...65,792,251
JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 involved_in IMP
ISO
ISS
PMID:26240138
(PMID:15051727)
GO_REF:0000024
RGD
UniProt
PMID:15051727 PMID:26240138 GO_REF:0000024, RGD:13210532 NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897
JBrowse link
G Cldn19 claudin 19 involved_in ISO (PMID:27593915) RGD PMID:27593915 NCBI chr 5:132,862,939...132,870,364
Ensembl chr 5:132,863,267...132,868,227
JBrowse link
G Cldn3 claudin 3 involved_in ISO (PMID:27593915) RGD PMID:27593915 NCBI chr12:21,708,538...21,710,010
Ensembl chr12:21,708,398...21,711,001
JBrowse link
G Cldn5 claudin 5 involved_in ISO (PMID:25323998)
(PMID:30734065)
RGD PMID:25323998 PMID:30734065 NCBI chr11:82,212,822...82,214,248
Ensembl chr11:82,211,475...82,214,992
JBrowse link
G Cnot7 CCR4-NOT transcription complex, subunit 7 involved_in ISO (PMID:25038453) RGD PMID:25038453 NCBI chr16:51,775,416...51,794,581
Ensembl chr16:51,775,412...51,794,576
JBrowse link
G Cnpy2 canopy FGF signaling regulator 2 acts_upstream_of ISO (PMID:22378787) RGD PMID:22378787 NCBI chr 7:748,877...754,352
Ensembl chr 7:749,008...755,519
JBrowse link
G Cpne1 copine 1 involved_in ISO
IEA
(PMID:18212740)
GO_REF:0000107
RGD
Ensembl
PMID:18212740 GO_REF:0000107 NCBI chr 3:144,587,531...144,629,911
Ensembl chr 3:144,588,995...144,598,636
JBrowse link
G Creb1 cAMP responsive element binding protein 1 IMP RGD PMID:21816899 RGD:10059418 NCBI chr 9:65,903,511...65,972,562
Ensembl chr 9:65,903,547...65,970,816
JBrowse link
G Creb3l1 cAMP responsive element binding protein 3-like 1 involved_in ISO
IEA
(PMID:27121396)
GO_REF:0000107
RGD
Ensembl
PMID:27121396 GO_REF:0000107 NCBI chr 3:77,952,589...77,993,513
Ensembl chr 3:77,952,540...77,993,456
JBrowse link
G Crh corticotropin releasing hormone IMP Lhb RGD PMID:20663987 RGD:5508201 NCBI chr 2:102,143,055...102,144,919
Ensembl chr 2:102,143,055...102,144,919
JBrowse link
G Crhr2 corticotropin releasing hormone receptor 2 IMP Lhb, Fshb RGD PMID:19193717 RGD:2317015 NCBI chr 4:84,222,897...84,265,924
Ensembl chr 4:84,224,002...84,265,904
JBrowse link
G Crkl CRK like proto-oncogene, adaptor protein involved_in ISO (PMID:23959425) RGD PMID:23959425 NCBI chr11:83,528,788...83,563,214
Ensembl chr11:83,526,530...83,563,238
JBrowse link
G Cryaa crystallin, alpha A acts_upstream_of_or_within ISO MGI:1858025 (PMID:17893660) RGD PMID:17893660 NCBI chr20:9,783,605...9,787,351
Ensembl chr20:9,783,605...9,787,349
JBrowse link
G Cryab crystallin, alpha B acts_upstream_of_or_within ISO MGI:2652177 (PMID:17893660) RGD PMID:17893660 NCBI chr 8:51,093,441...51,099,161
Ensembl chr 8:51,093,441...51,099,157
JBrowse link
G Ctcf CCCTC-binding factor involved_in ISO (PMID:18614575) RGD PMID:18614575 NCBI chr19:33,521,726...33,571,124
Ensembl chr19:33,529,319...33,571,123
JBrowse link
G Ctnnb1 catenin beta 1 involved_in IMP
ISO
IEA
PMID:23270756
(PMID:19122665)
GO_REF:0000107
RGD
Ensembl
PMID:19122665 PMID:23270756 GO_REF:0000107, RGD:13210526 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
JBrowse link
G Daxx death-domain associated protein involved_in ISO
IEA
ISS
(PMID:10698492)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:10698492 GO_REF:0000024 GO_REF:0000107 NCBI chr20:4,970,090...4,976,145
Ensembl chr20:4,970,092...4,975,843
JBrowse link
G Ddrgk1 DDRGK domain containing 1 involved_in ISO (PMID:23675531) RGD PMID:23675531 NCBI chr 3:117,861,916...117,882,680
Ensembl chr 3:117,861,653...117,882,680
JBrowse link
G Ddx3 DEAD-box helicase 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:98,520,538...98,523,707
Ensembl chr13:98,520,201...98,524,176
JBrowse link
G Ddx3x DEAD-box helicase 3, X-linked involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:9,479,532...9,493,169
Ensembl chr  X:9,479,532...9,493,168
JBrowse link
G Ddx3y DEAD box helicase 3, Y-linked involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  Y:1,115,095...1,135,754
Ensembl chr  Y:1,116,309...1,135,706
JBrowse link
G Dgkq diacylglycerol kinase, theta involved_in ISO (PMID:24369117) RGD PMID:24369117 NCBI chr14:1,059,125...1,073,131
Ensembl chr14:1,059,170...1,073,131
JBrowse link
G Dicer1 dicer 1 ribonuclease III acts_upstream_of
involved_in
ISO (PMID:22105995)
(PMID:23322395)
RGD PMID:22105995 PMID:23322395 NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
JBrowse link
G Dip2a disco-interacting protein 2 homolog A involved_in ISO (PMID:20860622) RGD PMID:20860622 NCBI chr20:12,284,566...12,371,068
Ensembl chr20:12,284,654...12,370,217
JBrowse link
G Dll4 delta like canonical Notch ligand 4 involved_in ISO
IEA
(PMID:23388056)
GO_REF:0000107
RGD
Ensembl
PMID:23388056 GO_REF:0000107 NCBI chr 3:106,317,114...106,327,004
Ensembl chr 3:106,316,986...106,326,931
JBrowse link
G Dnmt1 DNA methyltransferase 1 involved_in
acts_upstream_of_or_within
ISO (PMID:27021683)
MGI:3613486|MGI:5566775 (PMID:29117290)
RGD PMID:27021683 PMID:29117290 NCBI chr 8:19,440,611...19,486,659
Ensembl chr 8:19,440,611...19,486,659
JBrowse link
G Dyrk1a dual specificity tyrosine phosphorylation regulated kinase 1A IGI RGD PMID:27056896 RGD:401959209 NCBI chr11:33,890,706...34,009,420
Ensembl chr11:33,890,490...34,009,420
JBrowse link
G Dysf dysferlin acts_upstream_of_or_within ISO MGI:1857883 (PMID:18276788) RGD PMID:18276788 NCBI chr 4:116,490,877...116,690,709
Ensembl chr 4:116,490,616...116,690,709
JBrowse link
G Edn1 endothelin 1 involved_in IDA
ISO
PMID:28484848
(PMID:16820593)
RGD PMID:16820593 PMID:28484848 RGD:13601996 NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
JBrowse link
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 acts_upstream_of_or_within ISO (PMID:23152784) RGD PMID:23152784 NCBI chr 4:102,805,495...102,866,914
Ensembl chr 4:102,805,510...102,866,911
JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 IMP Arc RGD PMID:17632064 RGD:10044262 NCBI chr10:104,549,038...104,559,032
Ensembl chr10:104,549,038...104,559,057
JBrowse link
G Emilin1 elastin microfibril interfacer 1 involved_in ISO (PMID:25056700) RGD PMID:25056700 NCBI chr 6:25,455,974...25,463,713
Ensembl chr 6:25,445,298...25,463,698
JBrowse link
G Eng endoglin involved_in ISO (PMID:12941632) RGD PMID:12941632 NCBI chr 3:15,934,566...15,972,618
Ensembl chr 3:15,934,518...15,973,230
JBrowse link
G Epm2a EPM2A glucan phosphatase, laforin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2182627 (PMID:18824542)
Ensembl
RGD
PMID:18824542 GO_REF:0000107 NCBI chr 1:5,727,111...5,845,338
Ensembl chr 1:5,727,066...5,920,555
JBrowse link
G Erp29 endoplasmic reticulum protein 29 involved_in ISO (PMID:22064321) RGD PMID:22064321 NCBI chr12:35,089,698...35,095,952
Ensembl chr12:35,089,707...35,096,376
JBrowse link
G Esr1 estrogen receptor 1 involved_in ISO
IEA
(PMID:21695196)
GO_REF:0000107
RGD
Ensembl
PMID:21695196 GO_REF:0000107 NCBI chr 1:41,106,335...41,499,104
Ensembl chr 1:41,210,475...41,495,002
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit IMP Cdkn1c, also known as p57kip2, cyclin-dependent kinase inhibitor 1c RGD PMID:22821416 RGD:7242953 NCBI chr 4:76,624,399...76,687,362
Ensembl chr 4:76,624,399...76,687,362
JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 involved_in ISO RNAcentral:URS00001CC379_9606 (PMID:23823476) RGD PMID:23823476 NCBI chr 2:170,149,706...170,311,536
Ensembl chr 2:170,149,694...170,309,941
JBrowse link
G Fermt1 FERM domain containing kindlin 1 involved_in ISO (PMID:24681597) RGD PMID:24681597 NCBI chr 3:120,171,301...120,213,555
Ensembl chr 3:120,171,561...120,213,555
JBrowse link
G Fgf19 fibroblast growth factor 19 involved_in ISO (PMID:19085950) RGD PMID:19085950 NCBI chr 1:200,056,526...200,060,980
Ensembl chr 1:200,056,644...200,060,287
JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO MGI:95525 (PMID:18191119), (PMID:24259513) RGD PMID:18191119 PMID:24259513 NCBI chr16:66,491,930...66,547,161
Ensembl chr16:66,494,042...66,547,350
JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO MGI:2135670 (PMID:20053668) RGD PMID:20053668 NCBI chr14:76,987,242...77,002,671
Ensembl chr14:76,987,993...77,003,341
JBrowse link
G Fgfr4 fibroblast growth factor receptor 4 acts_upstream_of_or_within ISO MGI:95522 (PMID:24259513) RGD PMID:24259513 NCBI chr17:9,461,541...9,476,268
Ensembl chr17:9,461,547...9,476,242
JBrowse link
G Flot2 flotillin 2 involved_in ISO
IEA
(PMID:24612608)
GO_REF:0000107
RGD
Ensembl
PMID:24612608 GO_REF:0000107 NCBI chr10:62,926,047...62,947,759
Ensembl chr10:62,920,665...62,947,756
JBrowse link
G Fmr1 fragile X messenger ribonucleoprotein 1 involved_in IMP
ISO
ISS
(PMID:23235829)
GO_REF:0000024
RGD
UniProt
PMID:23235829 PMID:24338128 GO_REF:0000024, RGD:11667958 NCBI chr  X:147,240,239...147,278,057
Ensembl chr  X:147,240,301...147,278,050
JBrowse link
G Foxl2 forkhead box L2 IMP Star, Fst RGD PMID:23567549 RGD:151893499 NCBI chr 8:99,512,971...99,514,500
Ensembl chr 8:99,513,303...99,514,427
JBrowse link
G Foxo1 forkhead box O1 involved_in ISO (PMID:24280217) RGD PMID:24280217 NCBI chr 2:136,312,168...136,390,603
Ensembl chr 2:136,312,168...136,387,790
JBrowse link
G Foxp1 forkhead box P1 involved_in ISO (PMID:30111844) RGD PMID:30111844 NCBI chr 4:131,559,599...132,155,092
Ensembl chr 4:131,564,756...132,112,258
JBrowse link
G Foxp3 forkhead box P3 acts_upstream_of_or_within ISO (PMID:24501220) RGD PMID:24501220 NCBI chr  X:14,908,494...14,924,994
Ensembl chr  X:14,908,494...14,923,838
JBrowse link
G Fyn FYN proto-oncogene, Src family tyrosine kinase involved_in IEA
ISO
GO_REF:0000107
(PMID:20978343)
Ensembl
RGD
PMID:20978343 GO_REF:0000107 NCBI chr20:42,767,733...42,960,903
Ensembl chr20:42,766,369...42,959,911
JBrowse link
G Gata2 GATA binding protein 2 involved_in ISO (PMID:27780851) RGD PMID:27780851 NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761
JBrowse link
G Gata3 GATA binding protein 3 acts_upstream_of_or_within ISO MGI:3696958 (PMID:17357106) RGD PMID:17357106 NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391
JBrowse link
G Gata4 GATA binding protein 4 involved_in ISO (PMID:25590961) RGD PMID:25590961 NCBI chr15:37,459,601...37,531,291
Ensembl chr15:37,459,601...37,505,636
JBrowse link
G Gata5 GATA binding protein 5 involved_in ISO (PMID:21633169) RGD PMID:21633169 NCBI chr 3:167,418,563...167,426,751
Ensembl chr 3:167,418,565...167,426,751
JBrowse link
G Ggnbp2 gametogenetin binding protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:26764350)
Ensembl
RGD
PMID:26764350 GO_REF:0000107 NCBI chr10:69,711,527...69,743,134
Ensembl chr10:69,711,532...69,743,365
JBrowse link
G Gja1 gap junction protein, alpha 1 acts_upstream_of_or_within ISO MGI:2445472 (PMID:19439426) RGD PMID:19439426 NCBI chr20:35,756,007...35,768,481
Ensembl chr20:35,755,991...35,768,582
JBrowse link
G Gper1 G protein-coupled estrogen receptor 1 involved_in ISO
IEA
IDA
(PMID:23840305)
GO_REF:0000107
PMID:23907461
RGD
Ensembl
PMID:23840305 PMID:23907461 GO_REF:0000107, RGD:8553942 NCBI chr12:15,217,217...15,222,679
Ensembl chr12:15,217,442...15,221,889
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta acts_upstream_of
involved_in
ISO
IEA
(PMID:27050373), (PMID:28122350)
GO_REF:0000107
RGD
Ensembl
PMID:27050373 PMID:28122350 GO_REF:0000107 NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
JBrowse link
G H19 H19 imprinted maternally expressed transcript acts_upstream_of_or_within ISO (PMID:19762426) RGD PMID:19762426 NCBI chr 1:197,730,698...197,733,374
Ensembl chr 1:197,730,698...197,733,134
JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 involved_in ISO
IEA
(PMID:24161931)
GO_REF:0000107
RGD
Ensembl
PMID:24161931 GO_REF:0000107 NCBI chr16:32,917,448...32,920,791
Ensembl chr16:32,917,823...32,919,891
JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO UniProtKB:O00182 (PMID:25578313) RGD PMID:25578313 NCBI chr10:30,882,484...30,914,018
Ensembl chr10:30,882,606...30,909,137
JBrowse link
G Hdac1 histone deacetylase 1 involved_in ISO (PMID:16581785) RGD PMID:16581785 NCBI chr 5:141,853,992...141,881,057
Ensembl chr 5:141,853,989...141,881,111
JBrowse link
G Hdac5 histone deacetylase 5 acts_upstream_of_or_within ISO (PMID:23926128) RGD PMID:23926128 NCBI chr10:87,152,978...87,187,921
Ensembl chr10:87,152,978...87,188,235
JBrowse link
G Hdac8 histone deacetylase 8 IMP Stx1a RGD PMID:28559304 RGD:13208603 NCBI chr  X:67,385,288...67,593,014
Ensembl chr  X:67,385,289...67,592,923
JBrowse link
G Hes1 hes family bHLH transcription factor 1 IMP RGD PMID:19670267 RGD:9685170 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
JBrowse link
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 acts_upstream_of_or_within
involved_in
ISO (PMID:22615585)
(PMID:16025100)
RGD PMID:16025100 PMID:22615585 NCBI chr 2:93,096,605...93,100,316
Ensembl chr 2:93,095,498...93,100,312
JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 acts_upstream_of_or_within
involved_in
ISO MGI:2447620 (PMID:20382855), (PMID:22615585)
(PMID:16025100)
RGD PMID:16025100 PMID:20382855 PMID:22615585 NCBI chr 1:26,822,131...26,832,218
Ensembl chr 1:26,822,131...26,832,218
JBrowse link
G Heyl hes-related family bHLH transcription factor with YRPW motif-like acts_upstream_of_or_within ISO (PMID:22615585) RGD PMID:22615585 NCBI chr 5:135,508,160...135,525,152
Ensembl chr 5:135,508,160...135,525,152
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in ISO
IEA
(PMID:26879375)
GO_REF:0000107
RGD
Ensembl
PMID:26879375 GO_REF:0000107 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
JBrowse link
G Hinfp histone H4 transcription factor involved_in ISO (PMID:15541338), (PMID:17974976) RGD PMID:15541338 PMID:17974976 NCBI chr 8:44,634,333...44,644,288
Ensembl chr 8:44,634,333...44,641,000
JBrowse link
G Hmgb2 high mobility group box 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:23495099)
AgBase
RGD
PMID:23495099 GO_REF:0000024 NCBI chr16:32,710,651...32,713,230
Ensembl chr16:32,710,658...32,713,140
Ensembl chr 1:32,710,658...32,713,140
JBrowse link
G Hmgb2l1 high mobility group box 2-like 1 involved_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr11:47,252,583...47,253,646
Ensembl chr11:47,252,569...47,253,669
Ensembl chr 1:47,252,569...47,253,669
JBrowse link
G Hmgb2l2 high mobility group box 2 like 2 involved_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr14:69,045,590...69,046,623
Ensembl chr14:69,045,641...69,046,640
Ensembl chr 1:69,045,641...69,046,640
JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D IMP Mmp9 RGD PMID:16683234 RGD:10042976 NCBI chr14:9,615,375...9,638,975
Ensembl chr14:9,615,479...9,633,786
JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K IMP Orm1 RGD PMID:9553145 RGD:2303817 NCBI chr17:6,262,936...6,275,001
Ensembl chr17:6,262,998...6,274,997
JBrowse link
G Hras HRas proto-oncogene, GTPase involved_in ISO (PMID:23027131) RGD PMID:23027131 NCBI chr 1:196,290,127...196,299,823
Ensembl chr 1:196,296,263...196,300,615
JBrowse link
G Hsf1 heat shock transcription factor 1 IMP Igf2r RGD PMID:24786827 RGD:10402547 NCBI chr 7:108,196,040...108,223,011
Ensembl chr 7:108,196,056...108,223,011
JBrowse link
G Hspa4 heat shock protein family A (Hsp70) member 4 IMP Tnf, Il1b, Icam1, Nos2 RGD PMID:17473852 RGD:5688754 NCBI chr10:37,408,025...37,449,080
Ensembl chr10:37,408,025...37,449,001
JBrowse link
G Id1 inhibitor of DNA binding 1 acts_upstream_of_or_within ISO (PMID:20231428) RGD PMID:20231428 NCBI chr 3:141,210,666...141,212,420
Ensembl chr 3:141,211,267...141,212,419
JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in IMP
ISO
ISS
p21
(PMID:18474814)
GO_REF:0000024
RGD
UniProt
PMID:18474814 PMID:11706002 GO_REF:0000024, RGD:619536 NCBI chr 6:41,740,556...41,742,393
Ensembl chr 6:41,728,946...41,744,400
JBrowse link
G Id3 inhibitor of DNA binding 3 acts_upstream_of_or_within ISO (PMID:23523789) RGD PMID:23523789 NCBI chr 5:148,372,784...148,374,353
Ensembl chr 5:148,372,762...148,374,349
JBrowse link
G Ifng interferon gamma involved_in ISO (PMID:23817958)
(PMID:29061364)
RGD PMID:23817958 PMID:29061364 NCBI chr 7:53,903,339...53,907,375
Ensembl chr 7:53,903,337...53,907,375
JBrowse link
G Igf1 insulin-like growth factor 1 involved_in ISO (PMID:29167509)
(PMID:19933931)
RGD PMID:19933931 PMID:29167509 NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296
JBrowse link
G Il1b interleukin 1 beta IDA Nr2e1 RGD PMID:23168994 RGD:7175538 NCBI chr 3:137,030,200...137,036,581
Ensembl chr 3:116,577,010...116,583,415
JBrowse link
G Inppl1 inositol polyphosphate phosphatase-like 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3530363 (PMID:15654325)
Ensembl
RGD
PMID:15654325 GO_REF:0000107 NCBI chr 1:156,183,043...156,197,500
Ensembl chr 1:156,183,059...156,197,500
JBrowse link
G Ins2 insulin 2 acts_upstream_of ISO (PMID:31501273) RGD PMID:31501273 NCBI chr 1:197,843,277...197,992,522
Ensembl chr 1:197,843,281...197,864,775
JBrowse link
G Insr insulin receptor IMP SOCS3 levels in hypothalamus RGD PMID:17585961 RGD:2290473 NCBI chr12:1,193,193...1,330,976
Ensembl chr12:1,197,100...1,330,883
JBrowse link
G Iqgap3 IQ motif containing GTPase activating protein 3 acts_upstream_of_or_within ISO (PMID:18604197) RGD PMID:18604197 NCBI chr 2:173,542,151...173,583,956
Ensembl chr 2:173,542,110...173,583,956
JBrowse link
G Itgb8 integrin subunit beta 8 involved_in ISO (PMID:24312400) RGD PMID:24312400 NCBI chr 6:140,125,002...140,208,261
Ensembl chr 6:140,127,203...140,208,476
JBrowse link
G Kantr KANTR integral membrane protein acts_upstream_of_or_within ISO (PMID:26034286) RGD PMID:26034286 NCBI chr  X:21,402,717...21,430,663 JBrowse link
G Kdm2a lysine demethylase 2A acts_upstream_of_or_within ISO (PMID:25463925) RGD PMID:25463925 NCBI chr 1:201,612,427...201,682,359
Ensembl chr 1:201,612,453...201,680,787
JBrowse link
G Kdm4a lysine demethylase 4A involved_in ISO (PMID:25660547) RGD PMID:25660547 NCBI chr 5:131,672,754...131,719,534
Ensembl chr 5:131,672,754...131,719,501
JBrowse link
G Kdr kinase insert domain receptor involved_in ISO
IEA
(PMID:26879375)
GO_REF:0000107
RGD
Ensembl
PMID:26879375 GO_REF:0000107 NCBI chr14:32,217,871...32,261,018
Ensembl chr14:32,217,871...32,261,018
JBrowse link
G Keap1 Kelch-like ECH-associated protein 1 IDA RGD PMID:20026152 RGD:6902900 NCBI chr 8:28,044,555...28,054,042
Ensembl chr 8:19,768,375...19,777,862
JBrowse link
G Klf4 KLF transcription factor 4 involved_in ISO RNAcentral:URS00003768C5_9606 (PMID:22267480) RGD PMID:22267480 NCBI chr 5:70,278,843...70,283,751
Ensembl chr 5:70,278,972...70,283,602
JBrowse link
G Kpna7 karyopherin subunit alpha 7 acts_upstream_of_or_within ISO MGI:6108355 (PMID:20699224) RGD PMID:20699224 NCBI chr12:9,576,378...9,635,247
Ensembl chr12:9,576,378...9,612,833
JBrowse link
G L3mbtl2 L3MBTL histone methyl-lysine binding protein 2 acts_upstream_of_or_within ISO MGI:5810650 (PMID:22770845) RGD PMID:22770845 NCBI chr 7:113,186,303...113,209,706
Ensembl chr 7:113,186,370...113,207,489
JBrowse link
G Ldlr low density lipoprotein receptor involved_in IEA
ISO
GO_REF:0000107
(PMID:24255059)
Ensembl
RGD
PMID:24255059 GO_REF:0000107 NCBI chr 8:20,270,020...20,292,981
Ensembl chr 8:20,270,041...20,294,580
JBrowse link
G Lgals9 galectin 9 involved_in ISO UniProtKB:Q8TDQ0 (PMID:23408620), (PMID:25578313) RGD PMID:23408620 PMID:25578313 NCBI chr10:63,907,018...63,930,224
Ensembl chr10:63,907,018...63,930,045
JBrowse link
G Lgmn legumain involved_in ISO
IEA
(PMID:21237226)
GO_REF:0000107
RGD
Ensembl
PMID:21237226 GO_REF:0000107 NCBI chr 6:121,544,048...121,582,495
Ensembl chr 6:121,544,053...121,582,480
JBrowse link
G LOC120093070 PHD finger protein 11-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:33,526,380...33,549,382
Ensembl chr15:33,453,952...33,606,470
JBrowse link
G LOC120093163 PHD finger protein 11-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:33,453,948...33,475,669
Ensembl chr15:33,453,952...33,606,470
JBrowse link
G Lrp1 LDL receptor related protein 1 involved_in ISO (PMID:31023188) RGD PMID:31023188 NCBI chr 7:63,380,325...63,461,029
Ensembl chr 7:63,380,356...63,460,910
JBrowse link
G Lrp3 LDL receptor related protein 3 involved_in ISO
IEA
(PMID:28340487)
GO_REF:0000107
RGD
Ensembl
PMID:28340487 GO_REF:0000107 NCBI chr 1:87,843,815...87,859,147
Ensembl chr 1:87,844,868...87,859,110
JBrowse link
G Mael maelstrom spermatogenic transposon silencer acts_upstream_of_or_within ISO MGI:3795667 (PMID:18694567) RGD PMID:18694567 NCBI chr13:78,457,073...78,496,657
Ensembl chr13:78,457,073...78,496,657
JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 involved_in IGI PMID:28947594 BHF-UCL PMID:28947594 RGD:13524616 NCBI chr 8:64,683,449...64,754,900
Ensembl chr 8:64,683,449...64,755,147
JBrowse link
G Map2k2 mitogen activated protein kinase kinase 2 involved_in IGI PMID:28947594 BHF-UCL PMID:28947594 RGD:13524616 NCBI chr 7:8,590,729...8,610,279
Ensembl chr 7:8,580,905...8,610,243
JBrowse link
G Map3k7 mitogen activated protein kinase kinase kinase 7 IMP Cxcl12 RGD PMID:26002466 RGD:155804277 NCBI chr 5:46,356,973...46,415,597
Ensembl chr 5:46,357,931...46,415,597
JBrowse link
G Mapt microtubule-associated protein tau involved_in ISO (PMID:23164821) RGD PMID:23164821 NCBI chr10:89,138,644...89,236,137
Ensembl chr10:89,138,627...89,236,129
JBrowse link
G Mark1 microtubule affinity regulating kinase 1 acts_upstream_of
involved_in
ISO
IEA
(PMID:31281935)
GO_REF:0000107
RGD
Ensembl
PMID:31281935 GO_REF:0000107 NCBI chr13:96,450,189...96,555,304
Ensembl chr13:96,451,487...96,555,173
JBrowse link
G Max MYC associated factor X IDA RGD PMID:7791753 RGD:2316831 NCBI chr 6:95,636,859...95,662,204
Ensembl chr 6:95,636,858...95,662,137
JBrowse link
G Mbd1 methyl-CpG binding domain protein 1 IDA Gfap RGD PMID:16881068 RGD:9588644 NCBI chr18:67,869,870...67,884,501
Ensembl chr18:67,869,992...67,886,554
JBrowse link
G Mdm2 MDM2 proto-oncogene IMP Notch1, Hes1 RGD PMID:28100501 RGD:152995503 NCBI chr 7:53,290,660...53,315,205
Ensembl chr 7:53,290,664...53,314,915
JBrowse link
G Mecp2 methyl CpG binding protein 2 involved_in IMP
ISO
Bdnf
(PMID:23960241)
RGD PMID:23960241 PMID:19217433 RGD:11069822 NCBI chr  X:151,781,177...151,844,687
Ensembl chr  X:151,789,930...151,844,689
JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISS
ISO
GO_REF:0000024
(PMID:16680724)
UniProt
RGD
PMID:16680724 GO_REF:0000024 NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:3041135 (PMID:23994610) RGD PMID:23994610 NCBI chr 4:45,790,456...45,898,139
Ensembl chr 4:45,790,791...45,897,876
JBrowse link
G Mif macrophage migration inhibitory factor involved_in ISO (PMID:10562313) RGD PMID:10562313 NCBI chr20:12,790,919...12,791,784
Ensembl chr20:12,790,902...12,799,504
Ensembl chr 4:12,790,902...12,799,504
JBrowse link
G Mir1 microRNA 1 acts_upstream_of_or_within ISO (PMID:21690310) RGD PMID:21690310 NCBI chr18:1,887,537...1,887,623 JBrowse link
G Mir100 microRNA 100 acts_upstream_of ISO (PMID:22684006) RGD PMID:22684006 NCBI chr 8:41,901,225...41,901,304
Ensembl chr 8:41,901,225...41,901,304
JBrowse link
G Mir101-2 microRNA 101-2 acts_upstream_of
acts_upstream_of_or_within
ISO (PMID:23554480)
(PMID:31934175)
RGD PMID:23554480 PMID:31934175 NCBI chr 1:226,860,371...226,860,467
Ensembl chr 1:226,860,371...226,860,467
JBrowse link
G Mir101a microRNA 101a acts_upstream_of_or_within ISO (PMID:31934175)
(PMID:23554480)
RGD PMID:23554480 PMID:31934175 NCBI chr 5:115,966,332...115,966,406
Ensembl chr 5:115,966,328...115,966,410
JBrowse link
G Mir106a microRNA 106a acts_upstream_of ISO (PMID:23399447) RGD PMID:23399447 NCBI chr  X:132,422,584...132,422,661
Ensembl chr  X:132,422,584...132,422,661
JBrowse link
G Mir106b microRNA 106b acts_upstream_of_or_within ISO (PMID:22556343) RGD PMID:22556343 NCBI chr12:17,043,344...17,043,425
Ensembl chr12:17,043,344...17,043,425
JBrowse link
G Mir125a microRNA 125a involved_in ISO (PMID:25116893) RGD PMID:25116893 NCBI chr 1:58,677,626...58,677,710
Ensembl chr 1:58,677,626...58,677,710
JBrowse link
G Mir125b1 microRNA 125b-1 acts_upstream_of ISO UniProtKB:O00238 (PMID:28214897) RGD PMID:28214897 NCBI chr 8:41,952,966...41,953,052
Ensembl chr 8:41,952,966...41,953,052
JBrowse link
G Mir125b2 microRNA 125b-2 acts_upstream_of ISO UniProtKB:O00238 (PMID:28214897) RGD PMID:28214897 NCBI chr11:16,245,620...16,245,707 JBrowse link
G Mir126b microRNA 126b IDA RGD PMID:33416109 RGD:401850543 NCBI chr 3:9,415,087...9,415,159 JBrowse link
G Mir128-1 microRNA 128-1 acts_upstream_of_or_within ISO (PMID:23990020) RGD PMID:23990020 NCBI chr13:39,699,449...39,699,530
Ensembl chr13:39,699,449...39,699,530
JBrowse link
G Mir128-2 microRNA 128-2 acts_upstream_of_or_within ISO (PMID:23990020) RGD PMID:23990020 NCBI chr 8:112,085,467...112,085,550
Ensembl chr 8:112,085,467...112,085,550
JBrowse link
G Mir132 microRNA 132 involved_in ISO (PMID:24924687), (PMID:25217442) RGD PMID:24924687 PMID:25217442 NCBI chr10:60,023,696...60,023,796
Ensembl chr10:60,023,696...60,023,796
JBrowse link
G Mir133a1 microRNA 133a-1 acts_upstream_of_or_within ISO (PMID:21628588) RGD PMID:21628588 NCBI chr18:1,885,082...1,885,168 JBrowse link
G Mir134 microRNA 134 acts_upstream_of_or_within ISO (PMID:18806776) RGD PMID:18806776 NCBI chr 6:128,748,908...128,748,980 JBrowse link
G Mir135a microRNA 135a acts_upstream_of_or_within ISO (PMID:21628588) RGD PMID:21628588 NCBI chr 7:26,611,990...26,612,089
Ensembl chr 7:26,611,990...26,612,089
JBrowse link
G Mir135b microRNA 135b acts_upstream_of ISO (PMID:23594704) RGD PMID:23594704 NCBI chr13:43,638,857...43,638,953
Ensembl chr13:43,638,857...43,638,953
JBrowse link
G Mir137 microRNA 137 acts_upstream_of_or_within ISO (PMID:21628588) RGD PMID:21628588 NCBI chr 2:206,480,881...206,480,982
Ensembl chr 2:206,480,884...206,480,985
JBrowse link
G Mir140 microRNA 140 involved_in
acts_upstream_of_or_within
ISO (PMID:30233718)
(PMID:24349493)
(PMID:24928442)
RGD PMID:24349493 PMID:24928442 PMID:30233718 NCBI chr19:35,465,577...35,465,675
Ensembl chr19:35,465,577...35,465,675
JBrowse link
G Mir144 microRNA 144 acts_upstream_of_or_within ISO (PMID:27785072) RGD PMID:27785072 NCBI chr10:62,961,348...62,961,430
Ensembl chr10:62,961,348...62,961,430
JBrowse link
G Mir146a microRNA 146a involved_in ISO (PMID:29384235) RGD PMID:29384235 NCBI chr10:27,848,516...27,848,610
Ensembl chr10:27,848,516...27,848,610
JBrowse link
G Mir154 microRNA 154 acts_upstream_of_or_within ISO (PMID:25959411) RGD PMID:25959411 NCBI chr 6:128,752,947...128,753,030
Ensembl chr 6:128,752,947...128,753,030
JBrowse link
G Mir155 microRNA 155 involved_in
acts_upstream_of_or_within
ISO (PMID:22815348)
(PMID:22517757)
RGD PMID:22517757 PMID:22815348 NCBI chr11:37,261,114...37,261,178
Ensembl chr11:23,774,654...23,774,718
JBrowse link
G Mir17 microRNA 17 involved_in
acts_upstream_of
ISO (PMID:22161164)
(PMID:23399447)
RGD PMID:22161164 PMID:23399447 NCBI chr15:92,180,629...92,180,712
Ensembl chr15:92,180,629...92,180,712
JBrowse link
G Mir181a2 microRNA 181a-2 involved_in ISO RNAcentral:URS00001A9746_9606|RNAcentral:URS0000229622_9606|RNAcentral:URS00004449AE_9606 (PMID:18728182) RGD PMID:18728182 NCBI chr 3:22,615,845...22,615,961
Ensembl chr 3:22,615,845...22,615,961
JBrowse link
G Mir181b1 microRNA 181b-1 acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr13:49,485,688...49,485,797
Ensembl chr13:49,485,688...49,485,797
JBrowse link
G Mir181b2 microRNA 181b-2 acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr 3:22,616,948...22,617,035
Ensembl chr 3:22,616,948...22,617,035
JBrowse link
G Mir183 microRNA 183 acts_upstream_of
acts_upstream_of_or_within
ISO (PMID:25152390)
(PMID:19940135)
RGD PMID:19940135 PMID:25152390 NCBI chr 4:58,788,614...58,788,723
Ensembl chr 4:58,788,614...58,788,723
JBrowse link
G Mir185 microRNA 185 involved_in ISO RNAcentral:URS00002367FA_9606|RNAcentral:URS00004176D4_9606 (PMID:24296663) RGD PMID:24296663 NCBI chr11:82,664,716...82,664,795
Ensembl chr11:82,664,716...82,664,795
JBrowse link
G Mir186 microRNA 186 acts_upstream_of_or_within ISO (PMID:26626440)
(PMID:26710318)
RGD PMID:26626440 PMID:26710318 NCBI chr 2:246,582,806...246,582,891
Ensembl chr 2:246,582,806...246,582,891
JBrowse link
G Mir18a microRNA 18a acts_upstream_of_or_within ISO (PMID:23152446) RGD PMID:23152446 NCBI chr15:98,587,984...98,588,079
Ensembl chr15:92,180,765...92,180,860
JBrowse link
G Mir196a1 microRNA 196a-1 acts_upstream_of_or_within ISO (PMID:15105502) RGD PMID:15105502 NCBI chr10:81,231,006...81,231,085
Ensembl chr10:81,231,006...81,231,085
JBrowse link
G Mir196a2 microRNA 196a-2 acts_upstream_of_or_within ISO (PMID:15105502) RGD PMID:15105502 NCBI chr 7:134,110,400...134,110,509
Ensembl chr 7:134,110,400...134,110,509
JBrowse link
G Mir196b microRNA 196b acts_upstream_of_or_within ISO (PMID:15105502) RGD PMID:15105502 NCBI chr 4:81,330,487...81,330,571
Ensembl chr 4:81,330,487...81,330,571
JBrowse link
G Mir199a2 microRNA 199a-2 involved_in ISO (PMID:23764775) RGD PMID:23764775 NCBI chr13:74,582,954...74,583,063
Ensembl chr13:74,582,954...74,583,063
JBrowse link
G Mir19a microRNA 19a acts_upstream_of_or_within ISO UniProtKB:P04062 (PMID:25584808) RGD PMID:25584808 NCBI chr15:92,180,912...92,180,993
Ensembl chr15:92,180,912...92,180,993
JBrowse link
G Mir19b1 microRNA 19b-1 involved_in ISO (PMID:25765596) RGD PMID:25765596 NCBI chr15:92,181,214...92,181,300
Ensembl chr15:92,181,214...92,181,300
JBrowse link
G Mir19b2 microRNA 19b-2 involved_in ISO (PMID:25765596) RGD PMID:25765596 NCBI chr  X:132,422,072...132,422,167
Ensembl chr  X:132,422,072...132,422,167
JBrowse link
G Mir1a-1 microRNA 1a-1 acts_upstream_of_or_within ISO (PMID:21690310) RGD PMID:21690310 NCBI chr 3:167,487,117...167,487,201
Ensembl chr 3:167,487,117...167,487,201
JBrowse link
G Mir1b microRNA 1b acts_upstream_of_or_within ISO (PMID:21690310) RGD PMID:21690310 NCBI chr18:1,887,526...1,887,636
Ensembl chr18:1,887,526...1,887,636
JBrowse link
G Mir200b microRNA 200b involved_in ISO (PMID:21081489) RGD PMID:21081489 NCBI chr 5:166,649,272...166,649,366
Ensembl chr 5:166,649,272...166,649,366
JBrowse link
G Mir204 microRNA 204 acts_upstream_of_or_within ISO (PMID:21628588) RGD PMID:21628588 NCBI chr 1:220,316,931...220,317,040
Ensembl chr 1:220,316,931...220,317,040
JBrowse link
G Mir205 microRNA 205 acts_upstream_of
acts_upstream_of_or_within
ISO (PMID:23800974)
(PMID:21628588)
RGD PMID:21628588 PMID:23800974 NCBI chr13:105,035,878...105,035,985
Ensembl chr13:105,035,878...105,035,985
JBrowse link
G Mir206 microRNA 206 acts_upstream_of ISO (PMID:28342807) RGD PMID:28342807 NCBI chr 9:23,094,249...23,094,332
Ensembl chr 9:23,094,249...23,094,332
JBrowse link
G Mir208b microRNA 208b acts_upstream_of_or_within ISO (PMID:19726871) RGD PMID:19726871 NCBI chr15:28,451,638...28,451,749
Ensembl chr15:28,451,638...28,451,749
JBrowse link
G Mir20a microRNA 20a involved_in ISO UniProtKB:P12643 (PMID:22450430) RGD PMID:22450430 NCBI chr15:92,181,084...92,181,168
Ensembl chr15:92,181,084...92,181,168
JBrowse link
G Mir21 microRNA 21 acts_upstream_of
acts_upstream_of_or_within
involved_in
ISO UniProtKB:P01584 (PMID:21562928), (PMID:25327529)
(PMID:19147652)
(PMID:17072344), (PMID:20489163), (PMID:23684551)
RGD PMID:17072344 PMID:19147652 PMID:20489163 PMID:21562928 PMID:23684551 More... NCBI chr10:71,902,600...71,902,691
Ensembl chr10:71,405,257...71,405,348
JBrowse link
G Mir212 microRNA 212 involved_in
acts_upstream_of
ISO (PMID:25217442)
(PMID:18162065)
RGD PMID:18162065 PMID:25217442 NCBI chr10:60,023,403...60,023,513
Ensembl chr10:60,023,403...60,023,513
JBrowse link
G Mir214 microRNA 214 involved_in
acts_upstream_of
ISO (PMID:27144530)
(PMID:30703347)
RGD PMID:27144530 PMID:30703347 NCBI chr13:74,588,374...74,588,481
Ensembl chr13:74,588,372...74,588,481
JBrowse link
G Mir217 microRNA 217 acts_upstream_of_or_within ISO (PMID:21628588) RGD PMID:21628588 NCBI chr14:102,531,505...102,531,609
Ensembl chr14:102,531,505...102,531,609
JBrowse link
G Mir218-2 microRNA 218-2 acts_upstream_of_or_within ISO (PMID:20947829) RGD PMID:20947829 NCBI chr10:20,068,451...20,068,560
Ensembl chr10:20,068,451...20,068,560
JBrowse link
G Mir219a1 microRNA 219a-1 acts_upstream_of_or_within ISO (PMID:20223197) RGD PMID:20223197 NCBI chr20:4,829,687...4,829,796
Ensembl chr20:4,829,687...4,829,796
JBrowse link
G Mir222 microRNA 222 IMP RGD PMID:31691506 RGD:151893486 NCBI chr  X:3,428,904...3,429,006
Ensembl chr  X:3,428,904...3,429,006
JBrowse link
G Mir23a microRNA 23a acts_upstream_of_or_within ISO MGI:1914438 (PMID:21628588), (PMID:24101522) RGD PMID:21628588 PMID:24101522 NCBI chr19:23,954,997...23,955,071
Ensembl chr19:23,954,997...23,955,071
JBrowse link
G Mir24-2 microRNA 24-2 acts_upstream_of_or_within ISO (PMID:24824656) RGD PMID:24824656 NCBI chr19:23,954,683...23,954,790
Ensembl chr19:23,954,683...23,954,790
JBrowse link
G Mir27a microRNA 27a involved_in
acts_upstream_of
ISO (PMID:24608080)
UniProtKB:P01584 (PMID:25327529)
RGD PMID:24608080 PMID:25327529 NCBI chr19:23,954,831...23,954,917
Ensembl chr19:23,954,831...23,954,917
JBrowse link
G Mir27b microRNA 27b acts_upstream_of
involved_in
ISO (PMID:21562928)
(PMID:24608080), (PMID:26520906)
RGD PMID:21562928 PMID:24608080 PMID:26520906 NCBI chr17:1,813,427...1,813,523
Ensembl chr17:1,813,426...1,813,529
JBrowse link
G Mir296 microRNA 296 acts_upstream_of_or_within ISO (PMID:18806776) RGD PMID:18806776 NCBI chr 3:163,051,838...163,051,915
Ensembl chr 3:163,051,838...163,051,915
JBrowse link
G Mir29a microRNA 29a involved_in
acts_upstream_of_or_within
ISO (PMID:20570858)
(PMID:21522133)
RGD PMID:20570858 PMID:21522133 NCBI chr 4:59,650,608...59,650,695 JBrowse link
G Mir29b1 microRNA 29b-1 acts_upstream_of
acts_upstream_of_or_within
involved_in
ISO (PMID:23729669)
(PMID:21522133)
(PMID:19956414), (PMID:20570858), (PMID:25032858), (PMID:27030318)
RGD PMID:19956414 PMID:20570858 PMID:21522133 PMID:23729669 PMID:25032858 More... NCBI chr 4:59,650,987...59,651,067
Ensembl chr 4:59,650,986...59,651,067
JBrowse link
G Mir29b2 microRNA 29b-2 involved_in
acts_upstream_of_or_within
ISO (PMID:19956414), (PMID:20570858), (PMID:25032858), (PMID:27030318)
(PMID:21522133)
(PMID:23729669)
RGD PMID:19956414 PMID:20570858 PMID:21522133 PMID:23729669 PMID:25032858 More... NCBI chr13:106,570,371...106,570,451
Ensembl chr13:106,570,367...106,570,456
JBrowse link
G Mir301a microRNA 301a acts_upstream_of_or_within ISO (PMID:22517757) RGD PMID:22517757 NCBI chr10:71,925,336...71,925,435
Ensembl chr10:71,925,336...71,925,435
JBrowse link
G Mir30c1 microRNA 30c-1 acts_upstream_of_or_within ISO (PMID:21628588) RGD PMID:21628588 NCBI chr 5:134,349,237...134,349,325
Ensembl chr 5:134,349,237...134,349,325
JBrowse link
G Mir30c2 microRNA 30c-2 involved_in
acts_upstream_of_or_within
ISO (PMID:25732226)
(PMID:21628588)
RGD PMID:21628588 PMID:25732226 NCBI chr 9:25,757,342...25,757,425
Ensembl chr 9:25,757,342...25,757,425
JBrowse link
G Mir30e microRNA 30e IMP Becn1, Casp3 RGD PMID:27633839 RGD:401827149 NCBI chr 5:134,352,232...134,352,323
Ensembl chr 5:134,352,232...134,352,323
JBrowse link
G Mir320a microRNA 320a acts_upstream_of_or_within ISO (PMID:22925886) RGD PMID:22925886 NCBI chr15:45,516,392...45,516,473
Ensembl chr15:45,516,392...45,516,473
JBrowse link
G Mir33 microRNA 33 involved_in ISO (PMID:23536474) RGD PMID:23536474 NCBI chr 7:113,713,855...113,713,923
Ensembl chr 7:113,713,855...113,713,923
JBrowse link
G Mir330 microRNA 330 acts_upstream_of_or_within ISO (PMID:21993888) RGD PMID:21993888 NCBI chr 1:78,833,178...78,833,274
Ensembl chr 1:78,833,178...78,833,274
JBrowse link
G Mir34a microRNA 34a acts_upstream_of_or_within ISO (PMID:26330104)
(PMID:19895913)
RGD PMID:19895913 PMID:26330104 NCBI chr 5:160,533,002...160,533,103
Ensembl chr 5:160,533,002...160,533,103
JBrowse link
G Mir34b microRNA 34b acts_upstream_of_or_within ISO MGI:3619365|MGI:3619407|MGI:3639505|MGI:3718803 (PMID:19895913), (PMID:24982181) RGD PMID:19895913 PMID:24982181 NCBI chr 8:51,410,244...51,410,327
Ensembl chr 8:51,410,244...51,410,327
JBrowse link
G Mir34c microRNA 34c acts_upstream_of_or_within ISO MGI:3619364|MGI:3619407|MGI:3639505|MGI:3718803 (PMID:21628588), (PMID:24982181) RGD PMID:21628588 PMID:24982181 NCBI chr 8:51,409,726...51,409,802
Ensembl chr 8:51,409,726...51,409,802
JBrowse link
G Mir3582 microRNA 3582 acts_upstream_of_or_within ISO (PMID:21628588) RGD PMID:21628588 NCBI chr18:1,885,063...1,885,180
Ensembl chr18:1,885,063...1,885,180
JBrowse link
G Mir370 microRNA 370 acts_upstream_of_or_within ISO (PMID:23399934) RGD PMID:23399934 NCBI chr 6:128,572,257...128,572,335
Ensembl chr 6:128,572,257...128,572,335
JBrowse link
G Mir382 microRNA 382 involved_in ISO (PMID:29606596) RGD PMID:29606596 NCBI chr 6:128,748,539...128,748,618 JBrowse link
G Mir411 microRNA 411 involved_in ISO (PMID:29606596) RGD PMID:29606596 NCBI chr 6:128,723,189...128,723,264
Ensembl chr 6:128,723,184...128,723,279
JBrowse link
G Mir449a microRNA 449a involved_in
acts_upstream_of_or_within
ISO (PMID:25487955)
MGI:3619364|MGI:3619365|MGI:3639505|MGI:3718803 (PMID:24982181)
RGD PMID:24982181 PMID:25487955 NCBI chr 2:44,670,714...44,670,804
Ensembl chr 2:44,670,714...44,670,804
JBrowse link
G Mir449c microRNA 449c acts_upstream_of_or_within ISO MGI:3619364|MGI:3619365|MGI:3619407|MGI:3718803 (PMID:24982181) RGD PMID:24982181 NCBI chr 2:44,669,179...44,669,277
Ensembl chr 2:44,669,179...44,669,277
JBrowse link
G Mir451a microRNA 451a involved_in ISO (PMID:20816946) RGD PMID:20816946 NCBI chr10:62,961,520...62,961,591
Ensembl chr10:62,961,520...62,961,591
JBrowse link
G Mir489 microRNA 489 acts_upstream_of_or_within ISO (PMID:22358842) RGD PMID:22358842 NCBI chr 4:31,693,355...31,693,460
Ensembl chr 4:31,693,355...31,693,460
JBrowse link
G Mir494 microRNA 494 involved_in
acts_upstream_of_or_within
ISO (PMID:28124060)
(PMID:20837890)
RGD PMID:20837890 PMID:28124060 NCBI chr 6:128,728,710...128,728,792
Ensembl chr 6:128,728,709...128,728,793
JBrowse link
G Mir541 microRNA 541 involved_in ISO (PMID:29606596) RGD PMID:29606596 NCBI chr 6:128,757,016...128,757,105
Ensembl chr 6:128,757,016...128,757,105
JBrowse link
G Mir675 microRNA 675 acts_upstream_of_or_within ISO (PMID:24532688) RGD PMID:24532688 NCBI chr 1:197,732,275...197,732,358
Ensembl chr 1:197,732,275...197,732,358
JBrowse link
G Mir708 microRNA 708 involved_in ISO (PMID:31599428) RGD PMID:31599428 NCBI chr 1:150,599,876...150,599,963
Ensembl chr 1:150,599,876...150,599,963
JBrowse link
G Mir874 microRNA 874 acts_upstream_of_or_within ISO (PMID:24462679) RGD PMID:24462679 NCBI chr17:6,620,649...6,620,724
Ensembl chr17:6,620,649...6,620,724
JBrowse link
G Mir9-3 microRNA 9-3 acts_upstream_of_or_within ISO (PMID:26354749) RGD PMID:26354749 NCBI chr 1:133,440,049...133,440,138 JBrowse link
G Mir92a1 microRNA 92a-1 involved_in ISO (PMID:20484043), (PMID:22267480) RGD PMID:20484043 PMID:22267480 NCBI chr15:92,181,336...92,181,413
Ensembl chr15:92,181,336...92,181,413
JBrowse link
G Mir92a2 microRNA 92a-2 involved_in ISO (PMID:20484043), (PMID:22267480) RGD PMID:20484043 PMID:22267480 NCBI chr  X:132,421,942...132,422,033
Ensembl chr  X:132,421,942...132,422,033
JBrowse link
G Mir93 microRNA 93 acts_upstream_of_or_within ISO (PMID:22556343)
(PMID:22556343), (PMID:28797104)
RGD PMID:22556343 PMID:28797104 NCBI chr12:17,043,135...17,043,221
Ensembl chr12:17,043,135...17,043,221
JBrowse link
G Mir98 microRNA 98 acts_upstream_of ISO (PMID:27860183), (PMID:31886314) RGD PMID:27860183 PMID:31886314 NCBI chr  X:20,981,235...20,981,342
Ensembl chr  X:20,981,235...20,981,342
JBrowse link
G Mir99b microRNA 99b acts_upstream_of ISO (PMID:26315788) RGD PMID:26315788 NCBI chr 1:58,677,015...58,677,084
Ensembl chr 1:58,677,011...58,677,090
JBrowse link
G Mirlet7a1 microRNA let-7a-1 acts_upstream_of_or_within ISO MGI:3619049 (PMID:18604195), (PMID:23152446) RGD PMID:18604195 PMID:23152446 NCBI chr17:16,113,766...16,113,859
Ensembl chr17:16,113,768...16,113,867
JBrowse link
G Mirlet7i microRNA let-7i involved_in ISO (PMID:28844675) RGD PMID:28844675 NCBI chr 7:58,642,485...58,642,569
Ensembl chr 7:58,642,480...58,642,571
JBrowse link
G Mkks MKKS centrosomal shuttling protein acts_upstream_of_or_within ISO MGI:3526444 (PMID:18317593), (PMID:19150989) RGD PMID:18317593 PMID:19150989 NCBI chr 3:124,201,877...124,221,142
Ensembl chr 3:124,201,877...124,220,162
JBrowse link
G Morc1 MORC family CW-type zinc finger 1 involved_in ISO MGI:1857787 (PMID:26275923) RGD PMID:26275923 NCBI chr11:52,178,769...52,384,255
Ensembl chr11:52,178,769...52,384,255
JBrowse link
G Msr1 macrophage scavenger receptor 1 involved_in ISO (PMID:11240025) RGD PMID:11240025 NCBI chr16:52,717,775...52,803,602
Ensembl chr16:52,717,732...52,799,676
JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of ISO (PMID:24028588) RGD PMID:24028588 NCBI chr14:72,961,036...72,964,970
Ensembl chr14:72,961,148...72,964,966
JBrowse link
G Musk muscle associated receptor tyrosine kinase IDA epsilon-acetylcholine receptor RGD PMID:15604144 RGD:2317103 NCBI chr 5:73,058,427...73,169,696
Ensembl chr 5:73,058,121...73,171,932
JBrowse link
G Myadm myeloid-associated differentiation marker involved_in ISO
IEA
(PMID:23264465)
GO_REF:0000107
RGD
Ensembl
PMID:23264465 GO_REF:0000107 NCBI chr 1:65,864,180...65,874,701
Ensembl chr 1:65,864,173...65,874,035
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor IMP Adipor1 RGD PMID:23349663 RGD:7207857 NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630
JBrowse link
G Mycn MYCN proto-oncogene, bHLH transcription factor involved_in ISO
IEA
(PMID:21796614)
GO_REF:0000107
RGD
Ensembl
PMID:21796614 GO_REF:0000107 NCBI chr 6:35,717,764...35,723,590
Ensembl chr 6:35,717,764...35,723,590
JBrowse link
G Myt1 myelin transcription factor 1 acts_upstream_of_or_within ISO (PMID:17928203) RGD PMID:17928203 NCBI chr 3:168,890,466...168,950,341
Ensembl chr 3:168,886,089...168,950,341
JBrowse link
G Ncor1 nuclear receptor co-repressor 1 IMP transcript levels RGD PMID:19608741 RGD:5688288 NCBI chr10:46,999,536...47,142,294
Ensembl chr10:46,999,536...47,141,032
JBrowse link
G Ndfip1 Nedd4 family interacting protein 1 involved_in ISO (PMID:18776082) RGD PMID:18776082 NCBI chr18:30,265,808...30,316,068
Ensembl chr18:30,250,613...30,322,311
JBrowse link
G Ndfip2 Nedd4 family interacting protein 2 involved_in ISO (PMID:18776082) RGD PMID:18776082 NCBI chr15:82,032,366...82,087,043
Ensembl chr15:82,032,366...82,086,317
JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 involved_in ISO (PMID:26687115) RGD PMID:26687115 NCBI chr 2:224,016,214...224,132,135
Ensembl chr 2:224,016,214...224,110,404
JBrowse link
G Nkx3-1 NK3 homeobox 1 involved_in ISO (PMID:17486276) RGD PMID:17486276 NCBI chr15:44,473,851...44,476,443
Ensembl chr15:44,473,851...44,476,441
JBrowse link
G Nme1 NME/NM23 nucleoside diphosphate kinase 1 IDA Mmp2 RGD PMID:12010125 RGD:633207 NCBI chr10:78,907,036...78,929,659
Ensembl chr10:78,906,083...78,916,408
JBrowse link
G Noct nocturnin involved_in ISS
ISO
GO_REF:0000024
(PMID:20685873)
UniProt
RGD
PMID:20685873 GO_REF:0000024 NCBI chr 2:135,271,189...135,291,407
Ensembl chr 2:135,271,189...135,291,400
JBrowse link
G Nog noggin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:21624478)
Ensembl
RGD
PMID:21624478 GO_REF:0000107 NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339
JBrowse link
G Nos2 nitric oxide synthase 2 involved_in ISO
IEA
UniProtKB:P29477 (PMID:12085352)
UniProtKB:P35228 (PMID:12085352)
GO_REF:0000107
RGD
Ensembl
PMID:12085352 GO_REF:0000107 NCBI chr10:64,313,335...64,349,221
Ensembl chr10:63,815,308...63,851,210
JBrowse link
G Notch1 notch receptor 1 involved_in ISO (PMID:11306509) RGD PMID:11306509 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
JBrowse link
G Notch2 notch receptor 2 involved_in ISO
IEA
(PMID:11306509)
GO_REF:0000107
RGD
Ensembl
PMID:11306509 GO_REF:0000107 NCBI chr 2:185,610,594...185,744,088
Ensembl chr 2:185,610,589...185,744,088
JBrowse link
G Npm1 nucleophosmin 1 acts_upstream_of_or_within ISO MGI:98834 (PMID:18625840) RGD PMID:18625840 NCBI chr10:17,741,512...17,751,626
Ensembl chr10:17,739,941...17,751,645
Ensembl chr  X:17,739,941...17,751,645
JBrowse link
G Nr0b2 nuclear receptor subfamily 0, group B, member 2 involved_in ISO (PMID:19085950) RGD PMID:19085950 NCBI chr 5:145,779,294...145,782,609
Ensembl chr 5:145,779,294...145,782,609
JBrowse link
G Nr1h2 nuclear receptor subfamily 1, group H, member 2 IDA RGD PMID:7971966 RGD:61674 NCBI chr 1:95,041,967...95,047,358
Ensembl chr 1:95,041,967...95,047,377
JBrowse link
G Nrxn1 neurexin 1 involved_in ISO (PMID:26078884) RGD PMID:26078884 NCBI chr 6:3,177,788...4,323,848
Ensembl chr 6:3,177,897...4,322,710
JBrowse link
G Nts neurotensin acts_upstream_of
involved_in
ISO
IEA
(PMID:21806946)
GO_REF:0000107
RGD
Ensembl
PMID:21806946 GO_REF:0000107 NCBI chr 7:37,564,944...37,574,350
Ensembl chr 7:37,564,533...37,574,423
JBrowse link
G Ocln occludin involved_in ISO (PMID:21415414) RGD PMID:21415414 NCBI chr 2:33,391,303...33,442,207
Ensembl chr 2:31,657,220...31,764,150
JBrowse link
G Olfm1 olfactomedin 1 involved_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 3:11,520,522...11,558,240
Ensembl chr 3:11,520,729...11,558,239
JBrowse link
G Oprd1 opioid receptor, delta 1 involved_in ISO (PMID:24613828) RGD PMID:24613828 NCBI chr 5:144,306,188...144,340,960
Ensembl chr 5:144,306,188...144,340,960
JBrowse link
G Ovol2 ovo-like zinc finger 2 involved_in ISO (PMID:28455959) RGD PMID:28455959 NCBI chr 3:131,677,391...131,707,123
Ensembl chr 3:131,677,391...131,708,359
JBrowse link
G Park7 Parkinsonism associated deglycase involved_in ISO (PMID:22683601) RGD PMID:22683601 NCBI chr 5:161,353,718...161,376,993
Ensembl chr 5:161,353,719...161,376,970
JBrowse link
G Parp10 poly (ADP-ribose) polymerase family, member 10 involved_in ISO
IBA
(PMID:23575687)
GO_REF:0000033
RGD
GO_Central
PMID:23575687 GO_REF:0000033 NCBI chr 7:107,949,031...107,958,377
Ensembl chr 7:107,949,043...107,958,304
JBrowse link
G Parp14 poly (ADP-ribose) polymerase family, member 14 involved_in ISO
IBA
(PMID:27796300)
GO_REF:0000033
RGD
GO_Central
PMID:27796300 GO_REF:0000033 NCBI chr11:64,902,848...64,934,916
Ensembl chr11:64,902,785...64,934,916
JBrowse link
G Parp9 poly (ADP-ribose) polymerase family, member 9 involved_in ISO
IBA
(PMID:27796300)
GO_REF:0000033
RGD
GO_Central
PMID:27796300 GO_REF:0000033 NCBI chr11:64,780,977...64,814,995
Ensembl chr11:64,780,981...64,815,455
JBrowse link
G Pawr pro-apoptotic WT1 regulator involved_in ISO (PMID:25472717) RGD PMID:25472717 NCBI chr 7:43,645,028...43,725,033
Ensembl chr 7:43,645,084...43,725,028
JBrowse link
G Pc pyruvate carboxylase involved_in ISO
IEA
(PMID:23861867)
GO_REF:0000107
RGD
Ensembl
PMID:23861867 GO_REF:0000107 NCBI chr 1:201,799,374...201,898,412
Ensembl chr 1:201,804,267...201,898,380
JBrowse link
G Pdcd10 programmed cell death 10 involved_in ISO
IEA
(PMID:23388056)
GO_REF:0000107
RGD
Ensembl
PMID:23388056 GO_REF:0000107 NCBI chr 2:160,303,465...160,346,086
Ensembl chr 2:160,303,449...160,346,018
JBrowse link
G Pdgfb platelet derived growth factor subunit B involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:16530387), (PMID:23554459), (PMID:25089138)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:16530387 PMID:23554459 PMID:25089138 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:111,539,444...111,557,984
Ensembl chr 7:111,540,345...111,557,984
JBrowse link
G Pgr progesterone receptor involved_in ISO
IEA
(PMID:21695196)
GO_REF:0000107
RGD
Ensembl
PMID:21695196 GO_REF:0000107 NCBI chr 8:6,072,673...6,131,552
Ensembl chr 8:6,072,673...6,131,344
JBrowse link
G Phb1 prohibitin 1 IMP alpha-smooth-muscle actin RGD PMID:17043753 RGD:2292410 NCBI chr10:80,605,268...80,618,043
Ensembl chr10:80,605,251...80,618,042
JBrowse link
G Pias3 protein inhibitor of activated STAT, 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:17442941)
Ensembl
RGD
PMID:17442941 GO_REF:0000107 NCBI chr 2:184,232,546...184,241,455
Ensembl chr 2:184,232,571...184,241,480
JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:22952941)
GO_REF:0000024
Ensembl
RGD
Alzheimers_University_of_Toronto
PMID:22952941 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:144,056,415...144,138,045
Ensembl chr 1:144,056,721...144,137,557
JBrowse link
G Pick1 protein interacting with PRKCA 1 involved_in IMP PMID:24749734 ParkinsonsUK-UCL PMID:24749734 RGD:10047218 NCBI chr 7:110,796,623...110,816,850
Ensembl chr 7:110,797,117...110,816,848
JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha involved_in IGI PMID:28947594 BHF-UCL PMID:28947594 RGD:13524616 NCBI chr 2:115,175,275...115,249,034
Ensembl chr 2:115,174,984...115,249,032
JBrowse link
G Pik3cd phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit delta involved_in IGI PMID:28947594 BHF-UCL PMID:28947594 RGD:13524616 NCBI chr 5:160,094,952...160,142,962
Ensembl chr 5:160,094,952...160,120,930
JBrowse link
G Pink1 PTEN induced kinase 1 involved_in IMP
ISO
PMID:24475098
(PMID:24475098)
RGD PMID:24475098 PMID:24475098 RGD:10047288 NCBI chr 5:150,530,523...150,542,635
Ensembl chr 5:150,530,523...150,542,635
JBrowse link
G Pla2g3 phospholipase A2, group III acts_upstream_of_or_within ISO
IDA
(PMID:26637123) RGD PMID:26637123 PMID:26637123 RGD:11342276 NCBI chr14:78,367,625...78,373,913
Ensembl chr14:78,368,105...78,373,913
JBrowse link
G Plag1 PLAG1 zinc finger involved_in ISO (PMID:19808959) RGD PMID:19808959 NCBI chr 5:16,902,057...16,956,727
Ensembl chr 5:16,905,394...16,913,647
JBrowse link
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within ISO MGI:1856217 (PMID:23847051) RGD PMID:23847051 NCBI chr10:47,795,709...47,825,715
Ensembl chr10:47,795,709...47,825,714
JBrowse link
G Pou3f2 POU class 3 homeobox 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:23069940)
Ensembl
RGD
PMID:23069940 GO_REF:0000107 NCBI chr 5:36,077,930...36,083,838
Ensembl chr 5:36,077,930...36,083,838
JBrowse link
G Pou4f1 POU class 4 homeobox 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:28594399)
Ensembl
RGD
PMID:28594399 GO_REF:0000107 NCBI chr15:81,253,714...81,260,057
Ensembl chr15:81,257,781...81,259,728
JBrowse link
G Pou5f1 POU class 5 homeobox 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:23495099)
AgBase
RGD
PMID:23495099 GO_REF:0000024 NCBI chr20:3,227,836...3,232,598
Ensembl chr20:3,223,129...3,227,891
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma involved_in
acts_upstream_of_or_within
ISO
IGI
UniProtKB:P01137 (PMID:28467929)
(PMID:21880694)
(PMID:16530456)
PMID:28867608
RGD PMID:16530456 PMID:21880694 PMID:28467929 PMID:28867608 PMID:28867608 RGD:150521633, RGD:150521633 NCBI chr 4:150,095,743...150,221,104
Ensembl chr 4:148,423,194...148,548,468
JBrowse link
G Ppp2cb protein phosphatase 2 catalytic subunit beta acts_upstream_of_or_within ISO (PMID:28159925)
UniProtKB:P01375 (PMID:28159925)
RGD PMID:28159925 NCBI chr16:58,558,119...58,579,325
Ensembl chr16:58,558,122...58,579,576
JBrowse link
G Ppp3ca protein phosphatase 3 catalytic subunit alpha involved_in ISO (PMID:24161931) RGD PMID:24161931 NCBI chr 2:225,165,981...225,440,978
Ensembl chr 2:225,165,766...225,438,974
JBrowse link
G Prdm1 PR/SET domain 1 acts_upstream_of_or_within ISO MGI:3605483|MGI:3605621 (PMID:21670299) RGD PMID:21670299 NCBI chr20:47,959,858...47,981,488
Ensembl chr20:47,959,858...47,981,488
JBrowse link
G Prdm4 PR/SET domain 4 involved_in IMP PMID:23048031 ParkinsonsUK-UCL PMID:23048031 RGD:10054084 NCBI chr 7:17,953,832...17,980,489
Ensembl chr 7:17,954,019...17,980,489
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in ISO UniProtKB:Q8BRK8 (PMID:27430620) RGD PMID:27430620 NCBI chr 2:54,240,298...54,275,978
Ensembl chr 2:54,240,137...54,275,978
JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA
ISO
GO_REF:0000107
UniProtKB:Q5EG47 (PMID:27430620)
Ensembl
RGD
PMID:27430620 GO_REF:0000107 NCBI chr 5:119,807,992...119,879,987
Ensembl chr 5:119,813,226...119,879,543
JBrowse link
G Prkar1a protein kinase cAMP-dependent type I regulatory subunit alpha acts_upstream_of
involved_in
ISO
IEA
(PMID:28159925)
GO_REF:0000107
RGD
Ensembl
PMID:28159925 GO_REF:0000107 NCBI chr10:94,621,042...94,639,534
Ensembl chr10:94,620,039...94,639,041
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO
IEA
(PMID:19725078), (PMID:22314364)
GO_REF:0000107
RGD
Ensembl
PMID:19725078 PMID:22314364 GO_REF:0000107 NCBI chr 1:48,688,651...49,882,520
Ensembl chr 1:48,690,556...49,882,555
JBrowse link
G Psen1 presenilin 1 involved_in ISO UniProtKB:P05067 (PMID:28008308), (PMID:29061364) RGD PMID:28008308 PMID:29061364 NCBI chr 6:103,323,052...103,375,088
Ensembl chr 6:103,323,120...103,371,650
JBrowse link
G Pth parathyroid hormone involved_in ISO (PMID:17696759) RGD PMID:17696759 NCBI chr 1:167,508,121...167,511,530
Ensembl chr 1:167,508,598...167,511,530
JBrowse link
G Ptpn22 protein tyrosine phosphatase, non-receptor type 22 involved_in ISO (PMID:23991106)
(PMID:23871208), (PMID:23991106)
RGD PMID:23871208 PMID:23991106 NCBI chr 2:191,366,761...191,414,782
Ensembl chr 2:191,366,808...191,414,779
JBrowse link
G Ptrh2 peptidyl-tRNA hydrolase 2 involved_in ISO (PMID:15006356) RGD PMID:15006356 NCBI chr10:71,505,113...71,515,297
Ensembl chr10:71,504,956...71,515,398
JBrowse link
G Pum2 pumilio RNA-binding family member 2 IMP RGD PMID:31606248 RGD:242905203 NCBI chr 6:31,462,879...31,542,976
Ensembl chr 6:31,462,872...31,542,976
JBrowse link
G Rack1 receptor for activated C kinase 1 involved_in ISO (PMID:19451233) RGD PMID:19451233 NCBI chr10:33,169,415...33,174,896
Ensembl chr10:33,169,169...33,174,975
JBrowse link
G Rad21 RAD21 cohesin complex component IMP Nos2, Fcgr2b RGD PMID:36538854 RGD:243065265 NCBI chr 7:83,287,867...83,314,810
Ensembl chr 7:83,287,870...83,314,817
JBrowse link
G Rara retinoic acid receptor, alpha acts_upstream_of_or_within ISO MGI:109275 (PMID:18026104) RGD PMID:18026104 NCBI chr10:83,883,490...83,928,932
Ensembl chr10:83,893,384...83,928,142
JBrowse link
G Rb1 RB transcriptional corepressor 1 acts_upstream_of_or_within ISO (PMID:25100735) RGD PMID:25100735 NCBI chr15:48,371,295...48,502,473
Ensembl chr15:48,371,296...48,502,302
JBrowse link
G Rbl1 RB transcriptional corepressor like 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:25100735)
GO_REF:0000107
RGD
Ensembl
PMID:25100735 GO_REF:0000107 NCBI chr 3:145,806,160...145,869,434
Ensembl chr 3:145,807,095...145,869,330
JBrowse link
G Rbl2 RB transcriptional corepressor like 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:25100735)
GO_REF:0000107
RGD
Ensembl
PMID:25100735 GO_REF:0000107 NCBI chr19:15,876,852...15,923,632
Ensembl chr19:15,876,853...15,923,572
JBrowse link
G Rbms3 RNA binding motif, single stranded interacting protein 3 involved_in ISO (PMID:28409548) RGD PMID:28409548 NCBI chr 8:116,305,227...117,625,730
Ensembl chr 8:116,309,882...117,625,423
JBrowse link
G Rcor1 REST corepressor 1 involved_in ISO (PMID:15907476) RGD PMID:15907476 NCBI chr 6:130,069,606...130,146,164
Ensembl chr 6:130,069,392...130,146,153
JBrowse link
G Rel REL proto-oncogene, NF-kB subunit involved_in ISO (PMID:22065573) RGD PMID:22065573 NCBI chr14:97,690,105...97,721,194
Ensembl chr14:97,695,161...97,720,892
JBrowse link
G Rest RE1-silencing transcription factor involved_in ISS
ISO
IEA
IMP
GO_REF:0000024
(PMID:15907476), (PMID:9771705)
(PMID:10490617)
(PMID:11039732)
GO_REF:0000107
PMID:25108103
(PMID:20564196)
UniProt
RGD
Ensembl
PMID:9771705 PMID:10490617 PMID:11039732 PMID:15907476 PMID:20564196 More... GO_REF:0000024 GO_REF:0000107, RGD:14397584 NCBI chr14:30,859,109...30,879,828
Ensembl chr14:30,862,553...30,894,354
JBrowse link
G Rnaseh2b ribonuclease H2, subunit B involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4432164 (PMID:22802351)
Ensembl
RGD
PMID:22802351 GO_REF:0000107 NCBI chr15:36,541,200...36,592,016
Ensembl chr15:36,541,218...36,584,118
JBrowse link
G Robo1 roundabout guidance receptor 1 involved_in ISO (PMID:25691540) RGD PMID:25691540 NCBI chr11:10,580,863...11,621,675
Ensembl chr11:10,580,908...11,620,203
JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 involved_in ISO (PMID:29353861) RGD PMID:29353861 NCBI chr 6:39,679,116...39,774,033
Ensembl chr 6:39,679,082...39,774,031
JBrowse link
G Ros1 ROS proto-oncogene 1 , receptor tyrosine kinase involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2450566 (PMID:12773415)
Ensembl
RGD
PMID:12773415 GO_REF:0000107 NCBI chr20:31,432,636...31,583,998
Ensembl chr20:31,432,637...31,583,865
JBrowse link
G Samd7 sterile alpha motif domain containing 7 involved_in ISO (PMID:23565263) RGD PMID:23565263 NCBI chr 2:112,623,135...112,644,269
Ensembl chr 2:112,624,942...112,639,549
JBrowse link
G Serpine1 serpin family E member 1 IMP caspase-3 RGD PMID:22659625 RGD:8547927 NCBI chr12:19,601,272...19,611,657
Ensembl chr12:19,601,272...19,611,657
JBrowse link
G Serpinf1 serpin family F member 1 IMP Hif1a RGD PMID:21922517 RGD:8554899 NCBI chr10:60,250,198...60,262,593
Ensembl chr10:60,249,708...60,262,646
JBrowse link
G Setdb1 SET domain bifurcated histone lysine methyltransferase 1 involved_in ISO
IBA
(PMID:39096901)
GO_REF:0000033
RGD
GO_Central
PMID:39096901 GO_REF:0000033 NCBI chr 2:182,898,738...182,930,283
Ensembl chr 2:182,898,738...182,930,506
JBrowse link
G Setdb2 SET domain bifurcated histone lysine methyltransferase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:33,553,657...33,606,586
Ensembl chr15:33,453,952...33,606,470
JBrowse link
G Sfmbt2 Scm-like with four mbt domains 2 involved_in ISO (PMID:23385818) RGD PMID:23385818 NCBI chr17:67,934,296...68,128,905
Ensembl chr17:67,935,904...68,128,781
JBrowse link
G Sfrp1 secreted frizzled-related protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3045799 (PMID:19850029)
(PMID:10980594)
Ensembl
RGD
PMID:10980594 PMID:19850029 GO_REF:0000107 NCBI chr16:68,575,763...68,614,180
Ensembl chr16:68,575,763...68,614,286
JBrowse link
G Sfrp2 secreted frizzled-related protein 2 involved_in ISO (PMID:10980594) RGD PMID:10980594 NCBI chr 2:169,089,517...169,097,064
Ensembl chr 2:169,089,517...169,097,063
JBrowse link
G Sh3gl2 SH3 domain containing GRB2 like 2, endophilin A1 involved_in ISO
IEA
(PMID:24854121)
GO_REF:0000107
RGD
Ensembl
PMID:24854121 GO_REF:0000107 NCBI chr 5:99,653,189...99,827,500
Ensembl chr 5:99,653,152...100,113,843
JBrowse link
G Shh sonic hedgehog signaling molecule involved_in IEA
ISO
GO_REF:0000107
(PMID:16396903)
Ensembl
RGD
PMID:16396903 GO_REF:0000107 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:17916362)
(PMID:19479941), (PMID:23296834)
RGD PMID:17916362 PMID:19479941 PMID:23296834 NCBI chr20:25,307,225...25,329,273
Ensembl chr20:25,306,917...25,329,260
JBrowse link
G Slc24a3 solute carrier family 24 member 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:28602864)
Ensembl
RGD
PMID:28602864 GO_REF:0000107 NCBI chr 3:132,552,119...133,051,192
Ensembl chr 3:132,551,595...133,051,192
JBrowse link
G Slc2a10 solute carrier family 2 member 10 acts_upstream_of_or_within ISO (PMID:16550171) RGD PMID:16550171 NCBI chr 3:154,240,395...154,252,690
Ensembl chr 3:154,240,391...154,252,690
JBrowse link
G Slc35c2 solute carrier family 35 member C2 acts_upstream_of_or_within ISO (PMID:20837470) RGD PMID:20837470 NCBI chr 3:154,012,262...154,023,549
Ensembl chr 3:154,012,416...154,023,488
JBrowse link
G Slc7a5 solute carrier family 7 member 5 acts_upstream_of ISO (PMID:24038088) RGD PMID:24038088 NCBI chr19:49,935,220...49,963,823
Ensembl chr19:49,935,220...49,963,823
JBrowse link
G Slit2 slit guidance ligand 2 acts_upstream_of_or_within ISO MGI:1315202 (PMID:18829537) RGD PMID:18829537 NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
JBrowse link
G Slit3 slit guidance ligand 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1315205 (PMID:18829537)
Ensembl
RGD
PMID:18829537 GO_REF:0000107 NCBI chr10:19,571,798...20,156,634
Ensembl chr10:19,571,684...20,156,634
JBrowse link
G Smad2 SMAD family member 2 acts_upstream_of_or_within ISO (PMID:23152446) RGD PMID:23152446 NCBI chr18:69,849,884...69,918,926
Ensembl chr18:69,850,377...69,912,323
JBrowse link
G Smad3 SMAD family member 3 acts_upstream_of ISO (PMID:24378993) RGD PMID:24378993 NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960
JBrowse link
G Smad5 SMAD family member 5 acts_upstream_of ISO (PMID:26400397) RGD PMID:26400397 NCBI chr17:7,862,332...7,891,678
Ensembl chr17:7,864,720...7,891,634
JBrowse link
G Smcr8 SMCR8-C9orf72 complex subunit involved_in ISO (PMID:28195531) RGD PMID:28195531 NCBI chr10:45,457,962...45,465,101
Ensembl chr10:45,457,605...45,468,876
JBrowse link
G Smo smoothened, frizzled class receptor involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:16396903)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:16396903 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:58,343,626...58,373,823
Ensembl chr 4:58,343,529...58,373,829
JBrowse link
G Snx12 sorting nexin 12 involved_in ISO (PMID:22709416) RGD PMID:22709416 NCBI chr  X:66,226,995...66,356,945
Ensembl chr  X:66,227,053...66,356,950
JBrowse link
G Sox11 SRY-box transcription factor 11 involved_in ISO
ISS
(PMID:19808959)
GO_REF:0000024
RGD
UniProt
PMID:19808959 GO_REF:0000024 NCBI chr 6:44,008,333...44,010,354
Ensembl chr 6:44,008,340...44,010,354
JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO MGI:2429649 (PMID:24218621) RGD PMID:24218621 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
JBrowse link
G Spi1 Spi-1 proto-oncogene involved_in ISO
IEA
(PMID:29290617)
(PMID:28628103)
GO_REF:0000107
RGD
Ensembl
PMID:28628103 PMID:29290617 GO_REF:0000107 NCBI chr 3:77,059,744...77,093,730
Ensembl chr 3:77,073,012...77,092,393
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase involved_in IMP PMID:16530387 UniProt PMID:16530387 RGD:8553998 NCBI chr 3:146,091,969...146,139,492
Ensembl chr 3:146,091,841...146,139,476
JBrowse link
G Srsf6 serine and arginine rich splicing factor 6 IMP Bcl2l11 RGD PMID:23737756 RGD:11039479 NCBI chr 3:151,589,546...151,594,869
Ensembl chr 3:151,589,535...151,594,860
JBrowse link
G Sry sex determining region Y acts_upstream_of_or_within ISO (PMID:11869290) RGD PMID:11869290 NCBI chr  Y:441,525...442,037 JBrowse link
G Stat3 signal transducer and activator of transcription 3 involved_in ISO (PMID:23820254) RGD PMID:23820254 NCBI chr10:86,311,528...86,363,513
Ensembl chr10:85,811,218...85,863,057
JBrowse link
G Stc2 stanniocalcin 2 involved_in ISO (PMID:9753616) RGD PMID:9753616 NCBI chr10:16,251,046...16,260,815
Ensembl chr10:16,250,853...16,262,973
JBrowse link
G Stox1 storkhead box 1 involved_in ISO (PMID:22253775) RGD PMID:22253775 NCBI chr20:30,598,284...30,666,371
Ensembl chr20:30,598,168...30,666,939
JBrowse link
G Taf1 TATA-box binding protein associated factor 1 involved_in ISO (PMID:17237821) RGD PMID:17237821 NCBI chr  X:66,640,915...66,716,543
Ensembl chr  X:66,640,982...66,716,543
JBrowse link
G Tardbp TAR DNA binding protein involved_in ISO (PMID:18305152) RGD PMID:18305152 NCBI chr 5:159,050,518...159,062,218
Ensembl chr 5:159,051,799...159,062,055
JBrowse link
G Tbk1 TANK-binding kinase 1 involved_in ISO (PMID:18665841) RGD PMID:18665841 NCBI chr 7:57,077,830...57,110,868
Ensembl chr 7:57,077,830...57,110,892
JBrowse link
G Tcf4 transcription factor 4 acts_upstream_of_or_within ISO (PMID:20231428) RGD PMID:20231428 NCBI chr18:62,941,739...63,288,126
Ensembl chr18:62,943,782...63,284,425
JBrowse link
G Tcl1a Tcl1 family Akt coactivator A acts_upstream_of_or_within ISO (PMID:17938240) RGD PMID:17938240 NCBI chr 6:124,125,032...124,131,025
Ensembl chr 6:124,125,032...124,131,025
JBrowse link
G Terf2 telomeric repeat binding factor 2 involved_in ISO (PMID:11927518) RGD PMID:11927518 NCBI chr19:34,976,963...35,005,813
Ensembl chr19:34,977,471...35,005,819
JBrowse link
G Tert telomerase reverse transcriptase involved_in ISO (PMID:11927518) RGD PMID:11927518 NCBI chr 1:29,637,213...29,659,561
Ensembl chr 1:29,637,506...29,659,561
JBrowse link
G Tfap4 transcription factor AP-4 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr10:11,001,338...11,019,386
Ensembl chr10:11,002,911...11,019,386
JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in
acts_upstream_of
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(PMID:26634652)
RNAcentral:URS000024463E_9606 (PMID:22269326)
RNAcentral:URS000024463E_9606 (PMID:19913496), (PMID:20067797), (PMID:22269326), (PMID:25163461), (PMID:26634652), (PMID:28467929), (PMID:29167509)
(PMID:29529050)
BHF-UCL
RGD
PMID:19913496 PMID:20067797 PMID:22269326 PMID:25163461 PMID:26634652 More... GO_REF:0000024 NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in ISO (PMID:25217442)
(PMID:21984612)
RGD PMID:21984612 PMID:25217442 NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 involved_in ISO (PMID:22960625) RGD PMID:22960625 NCBI chr14:2,489,397...2,665,383
Ensembl chr14:2,489,397...2,663,341
JBrowse link
G Tgif1 TGFB-induced factor homeobox 1 IMP tropoelastin RGD PMID:18441095 RGD:2317192 NCBI chr 9:110,748,094...110,757,714
Ensembl chr 9:110,720,921...110,757,802
JBrowse link
G Tiparp TCDD-inducible poly(ADP-ribose) polymerase acts_upstream_of_or_within ISO (PMID:23275542) RGD PMID:23275542 NCBI chr 2:149,753,682...149,780,327
Ensembl chr 2:149,753,682...149,780,327
JBrowse link
G Tle5 TLE family member 5, transcriptional modulator involved_in ISO
IEA
(PMID:15006356)
GO_REF:0000107
RGD
Ensembl
PMID:15006356 GO_REF:0000107 NCBI chr 7:8,143,357...8,150,295
Ensembl chr 7:8,143,357...8,150,113
JBrowse link
G Tmf1 TATA element modulatory factor 1 acts_upstream_of_or_within ISO MGI:4867392 (PMID:22553199) RGD PMID:22553199 NCBI chr 4:129,759,952...129,785,705
Ensembl chr 4:129,763,114...129,785,629
JBrowse link
G Tnf tumor necrosis factor acts_upstream_of
acts_upstream_of_or_within
involved_in
ISO (PMID:22499991)
(PMID:26427354)
(PMID:20164187), (PMID:31124343), (PMID:31824476)
UniProtKB:Q16539 (PMID:15345745), (PMID:22267480), (PMID:24299952), (PMID:26371161)
RGD PMID:15345745 PMID:20164187 PMID:22267480 PMID:22499991 PMID:24299952 More... NCBI chr20:3,626,685...3,629,303
Ensembl chr20:3,622,011...3,624,629
JBrowse link
G Tnfrsf1a TNF receptor superfamily member 1A IDA type 2 iodothyronine deiodinase in alpha tanycytes RGD PMID:20501675 RGD:5130988 NCBI chr 4:158,150,815...158,163,592
Ensembl chr 4:158,150,820...158,163,591
JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO MGI:106184 (PMID:18625840) RGD PMID:18625840 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
JBrowse link
G Tp53inp1 tumor protein p53 inducible nuclear protein 1 involved_in ISO (PMID:26589288) RGD PMID:26589288 NCBI chr 5:24,253,986...24,272,250
Ensembl chr 5:24,260,568...24,267,968
JBrowse link
G Trim6 tripartite motif containing 6 involved_in ISO (PMID:24882218) RGD PMID:24882218 NCBI chr 1:158,683,746...158,696,936
Ensembl chr 1:158,683,746...158,696,914
JBrowse link
G Ttbk1 tau tubulin kinase 1 involved_in ISO (PMID:19118186) RGD PMID:19118186 NCBI chr 9:14,493,166...14,538,372
Ensembl chr 9:14,493,389...14,535,774
JBrowse link
G Ucn urocortin IDA ghrelin
Pla2g6
RGD PMID:21540451 PMID:14563694 RGD:5490560, RGD:5508192 NCBI chr 6:25,238,120...25,238,950
Ensembl chr 6:25,238,120...25,238,950
JBrowse link
G Ucn2 urocortin 2 IMP Fshb RGD PMID:19193717 RGD:2317015 NCBI chr 8:109,637,624...109,639,173
Ensembl chr 8:109,638,285...109,639,172
JBrowse link
G Upk3b uroplakin 3B involved_in ISO (PMID:18776082) RGD PMID:18776082 NCBI chr12:20,630,231...20,637,634
Ensembl chr12:20,631,525...20,637,724
JBrowse link
G Vegfa vascular endothelial growth factor A involved_in
acts_upstream_of_or_within
ISO
IEA
UniProtKB:Q9UDY2 (PMID:19148554), (PMID:28977001)
(PMID:22886301)
GO_REF:0000107
(PMID:22773844)
RGD
Ensembl
PMID:19148554 PMID:22773844 PMID:22886301 PMID:28977001 GO_REF:0000107 NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
JBrowse link
G Vegfb vascular endothelial growth factor B involved_in ISO (PMID:18259607) RGD PMID:18259607 NCBI chr 1:204,172,297...204,178,046
Ensembl chr 1:204,172,225...204,177,944
JBrowse link
G Vhl von Hippel-Lindau tumor suppressor involved_in
acts_upstream_of_or_within
ISO (PMID:23338840)
MGI:2136645 (PMID:22627278)
RGD PMID:22627278 PMID:23338840 NCBI chr 4:146,772,483...146,779,376
Ensembl chr 4:146,772,468...146,779,377
JBrowse link
G Vps35 VPS35 retromer complex component involved_in ISO (PMID:26203154) RGD PMID:26203154 NCBI chr19:21,765,771...21,801,620
Ensembl chr19:21,765,749...21,801,618
JBrowse link
G Wdr35 WD repeat domain 35 IMP
IDA
Bcl2, Bcl2l1
Gch1
RGD PMID:23289926 PMID:18671723 RGD:11553920, RGD:11553926 NCBI chr 6:31,771,315...31,831,450
Ensembl chr 6:31,771,360...31,831,029
JBrowse link
G Wnt4 Wnt family member 4 involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:15317892)
GO_REF:0000107
(PMID:11948913)
RGD
Ensembl
PMID:11948913 PMID:15317892 GO_REF:0000107 NCBI chr 5:149,513,573...149,535,415
Ensembl chr 5:149,514,018...149,532,859
JBrowse link
G Wnt8b Wnt family member 8B acts_upstream_of_or_within ISO MGI:4414945 (PMID:19890917) RGD PMID:19890917 NCBI chr 1:243,354,145...243,376,000
Ensembl chr 1:243,354,086...243,374,286
JBrowse link
G Wwp2 WW domain containing E3 ubiquitin protein ligase 2 involved_in ISO (PMID:18776082) RGD PMID:18776082 NCBI chr19:35,346,826...35,471,251
Ensembl chr19:35,346,814...35,472,699
JBrowse link
G Yap1 Yes1 associated transcriptional regulator involved_in ISO
IEA
(PMID:29403552)
GO_REF:0000107
RGD
Ensembl
PMID:29403552 GO_REF:0000107 NCBI chr 8:5,095,705...5,166,808
Ensembl chr 8:5,095,722...5,167,010
JBrowse link
G Yy1 YY1 transcription factor involved_in ISO (PMID:22065573) RGD PMID:22065573 NCBI chr 6:127,706,739...127,736,499
Ensembl chr 6:127,707,596...127,732,747
JBrowse link
G Zbtb20 zinc finger and BTB domain containing 20 involved_in ISO (PMID:23776228) RGD PMID:23776228 NCBI chr11:57,052,129...57,791,214
Ensembl chr11:57,072,880...57,510,210
JBrowse link
G Zbtb7b zinc finger and BTB domain containing 7B acts_upstream_of_or_within ISO (PMID:23034280) RGD PMID:23034280 NCBI chr 2:174,795,831...174,811,980
Ensembl chr 2:174,797,453...174,814,236
JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in ISO (PMID:18178554) RGD PMID:18178554 NCBI chr 5:137,376,562...137,385,351
Ensembl chr 5:137,376,564...137,385,351
JBrowse link
G Zfp148 zinc finger protein 148 involved_in ISO
IEA
(PMID:12771217)
GO_REF:0000107
RGD
Ensembl
PMID:12771217 GO_REF:0000107 NCBI chr11:67,276,455...67,385,803
Ensembl chr11:67,281,707...67,385,772
JBrowse link
G Zfp281 zinc finger protein 281 involved_in ISO
ISS
(PMID:10448078), (PMID:12771217)
GO_REF:0000024
RGD
UniProt
PMID:10448078 PMID:12771217 GO_REF:0000024 NCBI chr13:48,096,103...48,104,265
Ensembl chr13:48,037,286...48,104,888
JBrowse link
G Zfp410 zinc finger protein 410 involved_in ISO (PMID:33301730) RGD PMID:33301730 NCBI chr 6:103,963,265...103,990,252
Ensembl chr 6:103,964,060...103,990,225
JBrowse link
G Zfp503 zinc finger protein 503 involved_in ISO (PMID:20735826) RGD PMID:20735826 NCBI chr15:2,313,060...2,316,848
Ensembl chr15:2,313,060...2,316,848
JBrowse link
G Zmpste24 zinc metallopeptidase STE24 acts_upstream_of_or_within ISO MGI:2180033 (PMID:16079796), (PMID:23117660) RGD PMID:16079796 PMID:23117660 NCBI chr 5:134,627,218...134,660,360
Ensembl chr 5:134,627,229...134,660,110
JBrowse link
3'-UTR-mediated mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 involved_in ISO (PMID:21336257) RGD PMID:21336257 NCBI chr 1:234,749,138...234,931,219
Ensembl chr 1:234,751,733...234,931,560
JBrowse link
G Dhx36 DEAH-box helicase 36 involved_in ISO
ISS
(PMID:26489465)
GO_REF:0000024
RGD
UniProt
PMID:26489465 GO_REF:0000024 NCBI chr 2:146,856,469...146,894,577
Ensembl chr 2:146,856,469...146,894,572
JBrowse link
G Dnd1 DND microRNA-mediated repression inhibitor 1 involved_in ISO (PMID:28297718) RGD PMID:28297718 NCBI chr18:28,378,692...28,381,316
Ensembl chr18:28,378,692...28,381,316
JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D IMP RGD PMID:20805360 RGD:10042974 NCBI chr14:9,615,375...9,638,975
Ensembl chr14:9,615,479...9,633,786
JBrowse link
G Khsrp KH-type splicing regulatory protein involved_in ISO
ISS
(PMID:16126846), (PMID:28275056)
GO_REF:0000024
RGD
UniProt
PMID:16126846 PMID:28275056 GO_REF:0000024 NCBI chr 9:1,862,555...1,872,403
Ensembl chr 9:1,862,899...1,872,451
JBrowse link
G Mov10 Mov10 RNA helicase involved_in ISO (PMID:24726324) RGD PMID:24726324 NCBI chr 2:192,292,041...192,315,142
Ensembl chr 2:192,293,470...192,315,083
JBrowse link
G Plekhn1 pleckstrin homology domain containing N1 involved_in ISO
IBA
(PMID:29180010)
(PMID:27616329)
GO_REF:0000033
RGD
GO_Central
PMID:27616329 PMID:29180010 GO_REF:0000033 NCBI chr 5:166,805,309...166,813,339
Ensembl chr 5:166,804,837...166,813,155
JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO (PMID:24375645) RGD PMID:24375645 NCBI chr17:18,275,681...18,288,231
Ensembl chr17:18,275,688...18,288,102
JBrowse link
G Rc3h1 ring finger and CCCH-type domains 1 involved_in ISO (PMID:26000482) RGD PMID:26000482 NCBI chr13:73,174,075...73,245,762
Ensembl chr13:73,173,946...73,238,839
JBrowse link
G Tardbp TAR DNA binding protein involved_in ISO (PMID:28335005) RGD PMID:28335005 NCBI chr 5:159,050,518...159,062,218
Ensembl chr 5:159,051,799...159,062,055
JBrowse link
G Trim71 tripartite motif containing 71 involved_in ISO (PMID:23125361) RGD PMID:23125361 NCBI chr 8:114,193,439...114,250,807
Ensembl chr 8:114,199,187...114,250,807
JBrowse link
G Upf1 UPF1, RNA helicase and ATPase involved_in ISO (PMID:24726324) RGD PMID:24726324 NCBI chr16:19,076,594...19,097,365
Ensembl chr16:19,076,322...19,096,568
JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in ISS
IBA
ISO
GO_REF:0000024
GO_REF:0000033
(PMID:19322177), (PMID:23185455), (PMID:26000482), (PMID:26134560)
(PMID:19909337)
UniProt
GO_Central
RGD
PMID:19322177 PMID:19909337 PMID:23185455 PMID:26000482 PMID:26134560 GO_REF:0000024 GO_REF:0000033 NCBI chr 5:137,376,562...137,385,351
Ensembl chr 5:137,376,564...137,385,351
JBrowse link
G Zc3h12d zinc finger CCCH type containing 12D involved_in ISO (PMID:26134560) RGD PMID:26134560 NCBI chr 1:2,313,110...2,348,820
Ensembl chr 1:2,314,324...2,348,819
JBrowse link
G Zfp36 zinc finger protein 36 involved_in ISO
IEA
ISS
(PMID:11719186), (PMID:14679154), (PMID:15187101), (PMID:15634918), (PMID:15687258), (PMID:15766526), (PMID:20221403), (PMID:27193233), (PMID:9703499)
(PMID:17288565), (PMID:22701344), (PMID:27193233)
GO_REF:0000104
GO_REF:0000024
RGD
UniProt
PMID:9703499 PMID:11719186 PMID:14679154 PMID:15187101 PMID:15634918 More... GO_REF:0000024 GO_REF:0000104 NCBI chr 1:83,669,084...83,671,564
Ensembl chr 1:83,669,084...83,671,564
JBrowse link
G Zfp36l1 zinc finger protein 36, C3H type-like 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:20622884), (PMID:22701344), (PMID:24700863), (PMID:24733888), (PMID:27102483)
(PMID:12198173), (PMID:15467755), (PMID:15538381), (PMID:15687258), (PMID:18326031), (PMID:19179481), (PMID:24700863), (PMID:25014217), (PMID:25106868), (PMID:26542173)
UniProt
RGD
PMID:12198173 PMID:15467755 PMID:15538381 PMID:15687258 PMID:18326031 More... GO_REF:0000024 NCBI chr 6:98,930,705...98,935,748
Ensembl chr 6:98,930,718...98,935,748
JBrowse link
G Zfp36l2 zinc finger protein 36, C3H type-like 2 involved_in ISO (PMID:25106868)
(PMID:20622884), (PMID:22701344)
RGD PMID:20622884 PMID:22701344 PMID:25106868 NCBI chr 6:10,490,032...10,494,073
Ensembl chr 6:10,490,032...10,494,064
JBrowse link
3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angel2 angel homolog 2 involved_in ISO
IBA
(PMID:22547059)
GO_REF:0000033
RGD
GO_Central
PMID:22547059 GO_REF:0000033 NCBI chr13:102,509,111...102,529,501
Ensembl chr13:102,510,589...102,529,493
JBrowse link
G Boll boule homolog, RNA binding protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:56,734,890...56,859,917
Ensembl chr 9:56,733,584...56,859,916
JBrowse link
G Dazl deleted in azoospermia-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:10,695,593...10,712,330
Ensembl chr 9:10,695,592...10,712,323
JBrowse link
G Elavl1 ELAV like RNA binding protein 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:27616329)
(PMID:14517288), (PMID:19029303), (PMID:26489465), (PMID:29180010)
UniProt
RGD
PMID:14517288 PMID:19029303 PMID:26489465 PMID:27616329 PMID:29180010 GO_REF:0000024 NCBI chr12:2,640,936...2,684,787
Ensembl chr12:2,645,061...2,684,784
JBrowse link
G Elavl4 ELAV like RNA binding protein 4 involved_in ISO
ISS
(PMID:12034726)
GO_REF:0000024
RGD
UniProt
PMID:12034726 GO_REF:0000024 NCBI chr 5:125,056,848...125,200,543
Ensembl chr 5:125,056,848...125,200,446
JBrowse link
G Hnrnpa0 heterogeneous nuclear ribonucleoprotein A0 involved_in ISO
IBA
(PMID:12456657)
GO_REF:0000033
RGD
GO_Central
PMID:12456657 GO_REF:0000033 NCBI chr17:6,507,728...6,510,385
Ensembl chr17:6,507,275...6,509,375
JBrowse link
G Hnrnpc heterogeneous nuclear ribonucleoprotein C involved_in ISO (PMID:16010978) RGD PMID:16010978 NCBI chr15:24,779,593...24,809,213
Ensembl chr15:24,779,450...24,809,183
JBrowse link
G Mapkapk2 MAPK activated protein kinase 2 involved_in ISO (PMID:14517288), (PMID:15014438), (PMID:20932473) RGD PMID:14517288 PMID:15014438 PMID:20932473 NCBI chr13:42,513,762...42,560,061
Ensembl chr13:42,513,762...42,560,457
JBrowse link
G Myd88 MYD88, innate immune signal transduction adaptor involved_in ISO (PMID:15294994) RGD PMID:15294994 NCBI chr 8:119,074,439...119,078,508
Ensembl chr 8:119,074,437...119,079,415
JBrowse link
G Nicol1 NELL2 interacting cell ontogeny regulator 1 involved_in ISO (PMID:38625739) RGD PMID:38625739 NCBI chr14:76,768,145...76,769,661
Ensembl chr14:76,768,146...76,773,575
JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 IDA RGD PMID:11696543 RGD:10045987 NCBI chr 7:9,842,574...9,852,332
Ensembl chr 7:9,842,574...9,852,397
JBrowse link
G Rbm10 RNA binding motif protein 10 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:19508861)
Ensembl
RGD
PMID:19508861 GO_REF:0000107 NCBI chr  X:1,540,399...1,572,571
Ensembl chr  X:1,540,398...1,572,575
JBrowse link
G Rbm38 RNA binding motif protein 38 involved_in ISO (PMID:17050675) RGD PMID:17050675 NCBI chr 3:161,801,577...161,814,381
Ensembl chr 3:161,801,577...161,814,381
JBrowse link
G Rbm47 RNA binding motif protein 47 involved_in ISO (PMID:34160127)
(PMID:29844590)
RGD PMID:29844590 PMID:34160127 NCBI chr14:42,053,290...42,191,572
Ensembl chr14:42,154,142...42,189,431
JBrowse link
G Tardbp TAR DNA binding protein involved_in ISO (PMID:17481916) RGD PMID:17481916 NCBI chr 5:159,050,518...159,062,218
Ensembl chr 5:159,051,799...159,062,055
JBrowse link
G Tirap TIR domain containing adaptor protein involved_in ISO (PMID:15294994) RGD PMID:15294994 NCBI chr 8:33,531,724...33,548,508
Ensembl chr 8:33,531,725...33,547,432
JBrowse link
G Zfp36 zinc finger protein 36 involved_in ISO
ISS
(PMID:15014438)
GO_REF:0000024
RGD
UniProt
PMID:15014438 GO_REF:0000024 NCBI chr 1:83,669,084...83,671,564
Ensembl chr 1:83,669,084...83,671,564
JBrowse link
constitutive heterochromatin formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Morc2 MORC family CW-type zinc finger 2 involved_in ISO (PMID:28581500) RGD PMID:28581500 NCBI chr14:78,529,603...78,571,375
Ensembl chr14:78,527,009...78,571,343
JBrowse link
G Mphosph8 M-phase phosphoprotein 8 involved_in ISO
ISS
(PMID:28581500)
GO_REF:0000024
RGD
UniProt
PMID:28581500 GO_REF:0000024 NCBI chr15:30,800,546...30,828,415
Ensembl chr15:30,686,613...30,828,810
JBrowse link
G Pphln1 periphilin 1 involved_in ISO (PMID:28581500) RGD PMID:28581500 NCBI chr 7:124,538,594...124,629,985
Ensembl chr 7:124,538,627...124,629,985
JBrowse link
G Tasor transcription activation suppressor involved_in ISO (PMID:28581500) RGD PMID:28581500 NCBI chr16:2,606,807...2,669,902
Ensembl chr16:2,603,936...2,667,292
JBrowse link
CRD-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csde1 cold shock domain containing E1 involved_in ISO
IEA
(PMID:11051545)
GO_REF:0000107
RGD
Ensembl
PMID:11051545 GO_REF:0000107 NCBI chr 2:190,546,015...190,582,787
Ensembl chr 2:190,554,980...190,582,784
JBrowse link
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:19029303) RGD PMID:19029303 NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069
JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D involved_in ISO (PMID:11051545) RGD PMID:11051545 NCBI chr14:9,615,375...9,638,975
Ensembl chr14:9,615,479...9,633,786
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in IEA
ISO
GO_REF:0000107
(PMID:19029303)
Ensembl
RGD
PMID:19029303 GO_REF:0000107 NCBI chr13:90,069,058...90,086,905
Ensembl chr13:90,074,181...90,086,588
JBrowse link
G Igf2bp1 insulin-like growth factor 2 mRNA binding protein 1 involved_in ISS
IBA
ISO
GO_REF:0000024
GO_REF:0000033
(PMID:19029303), (PMID:29476152)
UniProt
GO_Central
RGD
PMID:19029303 PMID:29476152 GO_REF:0000024 GO_REF:0000033 NCBI chr10:80,908,300...80,951,097
Ensembl chr10:80,908,076...80,951,129
JBrowse link
G Igf2bp2 insulin-like growth factor 2 mRNA binding protein 2 involved_in ISO
IBA
(PMID:29476152)
GO_REF:0000033
RGD
GO_Central
PMID:29476152 GO_REF:0000033 NCBI chr11:78,874,402...78,974,392
Ensembl chr11:78,874,414...78,974,377
JBrowse link
G Igf2bp3 insulin-like growth factor 2 mRNA binding protein 3 involved_in ISO
IBA
(PMID:29476152)
GO_REF:0000033
RGD
GO_Central
PMID:29476152 GO_REF:0000033 NCBI chr 4:78,060,494...78,195,007
Ensembl chr 4:78,060,494...78,194,865
JBrowse link
G Pabpc1 poly(A) binding protein, cytoplasmic 1 involved_in ISO (PMID:11051545) RGD PMID:11051545 NCBI chr 7:67,777,438...67,789,731
Ensembl chr 7:67,777,381...67,789,744
JBrowse link
G Paip1 poly(A) binding protein interacting protein 1 involved_in ISO (PMID:11051545) RGD PMID:11051545 NCBI chr 2:51,523,190...51,550,241
Ensembl chr 2:51,522,921...51,550,241
JBrowse link
G Syncrip synaptotagmin binding, cytoplasmic RNA interacting protein involved_in ISO
IBA
IEA
(PMID:11051545), (PMID:19029303)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:11051545 PMID:19029303 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:89,402,487...89,435,517
Ensembl chr 8:89,402,866...89,435,515
JBrowse link
G Ybx1 Y box binding protein 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:19029303)
UniProt
RGD
PMID:19029303 GO_REF:0000024 NCBI chr 5:132,882,137...132,898,885
Ensembl chr 5:132,882,145...132,898,862
JBrowse link
deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnot7 CCR4-NOT transcription complex, subunit 7 involved_in
acts_upstream_of_or_within
ISO (PMID:31439799)
MGI:109382 (PMID:18625844)
RGD PMID:18625844 PMID:31439799 NCBI chr16:51,775,416...51,794,581
Ensembl chr16:51,775,412...51,794,576
JBrowse link
G Dcp1a decapping mRNA 1A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:5,656,960...5,702,151
Ensembl chr16:5,656,773...5,702,140
JBrowse link
G Dcp1b decapping mRNA 1B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:152,358,267...152,395,747
Ensembl chr 4:152,358,241...152,397,145
JBrowse link
G Dcp2 decapping mRNA 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:36,750,732...36,787,067
Ensembl chr18:36,750,732...36,788,557
JBrowse link
G Dcps decapping enzyme, scavenger involved_in IEA
IBA
GO_REF:0000002
GO_REF:0000033
GO_REF:0000104
InterPro
GO_Central
UniProt
GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 NCBI chr 8:33,468,669...33,524,407
Ensembl chr 8:33,415,671...33,524,389
JBrowse link
G Lsm1 LSM1 homolog, mRNA degradation associated involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:66,277,345...66,288,852
Ensembl chr16:66,277,345...66,288,852
JBrowse link
G Noct nocturnin acts_upstream_of_or_within ISO MGI:1298230 (PMID:18625844) RGD PMID:18625844 NCBI chr 2:135,271,189...135,291,407
Ensembl chr 2:135,271,189...135,291,400
JBrowse link
G Pan3 poly(A) specific ribonuclease subunit PAN3 acts_upstream_of_or_within ISO (PMID:18625844) RGD PMID:18625844 NCBI chr12:7,476,707...7,595,384
Ensembl chr12:7,476,697...7,599,204
JBrowse link
G Patl1 PAT1 homolog 1, processing body mRNA decay factor involved_in ISO
IBA
IEA
ISS
(PMID:20584987), (PMID:20852261)
GO_REF:0000033
GO_REF:0000002
GO_REF:0000024
RGD
GO_Central
InterPro
UniProt
PMID:20584987 PMID:20852261 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 NCBI chr 1:208,831,115...208,862,904
Ensembl chr 1:208,831,115...208,862,857
JBrowse link
G Patl2 PAT1 homolog 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:109,072,958...109,087,425
Ensembl chr 3:109,075,290...109,083,253
JBrowse link
G St3gal4 ST3 beta-galactoside alpha-2,3-sialyltransferase 4 involved_in IEA GO_REF:0000002
GO_REF:0000104
InterPro
UniProt
GO_REF:0000002 GO_REF:0000104 NCBI chr 8:33,415,666...33,465,319
Ensembl chr 8:33,415,671...33,524,389
JBrowse link
deadenylation-independent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dcp1a decapping mRNA 1A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:5,656,960...5,702,151
Ensembl chr16:5,656,773...5,702,140
JBrowse link
G Dcp1b decapping mRNA 1B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:152,358,267...152,395,747
Ensembl chr 4:152,358,241...152,397,145
JBrowse link
G Edc3 enhancer of mRNA decapping 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:58,106,147...58,151,685
Ensembl chr 8:58,106,175...58,151,671
JBrowse link
G Edc4 enhancer of mRNA decapping 4 involved_in IEA
IBA
GO_REF:0000002
GO_REF:0000033
InterPro
GO_Central
GO_REF:0000002 GO_REF:0000033 NCBI chr19:33,774,062...33,786,054
Ensembl chr19:33,774,055...33,787,758
JBrowse link
DNA methylation-dependent constitutive heterochromatin formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf7ip activating transcription factor 7 interacting protein involved_in ISO (PMID:27732843) RGD PMID:27732843 NCBI chr 4:169,385,872...169,471,652
Ensembl chr 4:169,385,872...169,471,650
JBrowse link
G Baz2a bromodomain adjacent to zinc finger domain, 2A involved_in ISO (PMID:12198165) RGD PMID:12198165 NCBI chr 7:523,204...560,911
Ensembl chr 7:523,265...560,659
JBrowse link
G Bend3 BEN domain containing 3 involved_in ISO (PMID:26100909) RGD PMID:26100909 NCBI chr20:46,980,246...47,017,059
Ensembl chr20:46,979,831...47,014,671
JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger acts_upstream_of_or_within ISO (PMID:24105743) RGD PMID:24105743 NCBI chr17:81,332,175...81,341,625
Ensembl chr17:81,332,214...81,388,690
JBrowse link
G Ctcf CCCTC-binding factor acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:24105743)
GO_REF:0000107
RGD
Ensembl
PMID:24105743 GO_REF:0000107 NCBI chr19:33,521,726...33,571,124
Ensembl chr19:33,529,319...33,571,123
JBrowse link
G Dnmt1 DNA methyltransferase 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:10615135)
Ensembl
RGD
PMID:10615135 GO_REF:0000107 NCBI chr 8:19,440,611...19,486,659
Ensembl chr 8:19,440,611...19,486,659
JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha involved_in
acts_upstream_of_or_within
ISO (PMID:30478443)
MGI:1261819 (PMID:17938196)
RGD PMID:17938196 PMID:30478443 NCBI chr 6:26,791,517...26,902,161
Ensembl chr 6:26,822,609...26,896,687
JBrowse link
G Dnmt3b DNA methyltransferase 3 beta acts_upstream_of_or_within ISO MGI:1261827 (PMID:17938196) RGD PMID:17938196 NCBI chr 3:142,130,588...142,169,128
Ensembl chr 3:142,130,592...142,169,124
JBrowse link
G Dnmt3l DNA methyltransferase 3 like involved_in ISS
ISO
GO_REF:0000024
(PMID:24074865)
UniProt
RGD
PMID:24074865 GO_REF:0000024 NCBI chr20:10,614,933...10,629,337
Ensembl chr20:10,614,934...10,629,516
JBrowse link
G Ehmt1 euchromatic histone lysine methyltransferase 1 involved_in ISO (PMID:18818694) RGD PMID:18818694 NCBI chr 3:7,580,680...7,729,046
Ensembl chr 3:7,580,683...7,729,007
JBrowse link
G Ehmt2 euchromatic histone lysine methyltransferase 2 involved_in ISO (PMID:18818694) RGD PMID:18818694 NCBI chr20:3,919,623...3,936,751
Ensembl chr20:3,919,624...3,941,547
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit acts_upstream_of_or_within ISO (PMID:24105743) RGD PMID:24105743 NCBI chr 4:76,624,399...76,687,362
Ensembl chr 4:76,624,399...76,687,362
JBrowse link
G Hdac1 histone deacetylase 1 involved_in ISO UniProtKB:Q9UBB5 (PMID:23770133) RGD PMID:23770133 NCBI chr 5:141,853,992...141,881,057
Ensembl chr 5:141,853,989...141,881,111
JBrowse link
G Hells helicase, lymphoid specific involved_in IBA
ISO
GO_REF:0000033
(PMID:15647320)
GO_Central
RGD
PMID:15647320 GO_REF:0000033 NCBI chr 1:236,701,704...236,748,239
Ensembl chr 1:236,701,758...236,746,844
JBrowse link
G Kmt2b lysine methyltransferase 2B acts_upstream_of_or_within ISO MGI:3056522|MGI:3623309 (PMID:20808952) RGD PMID:20808952 NCBI chr 1:85,821,700...85,840,987
Ensembl chr 1:85,821,753...85,841,326
JBrowse link
G Mbd1 methyl-CpG binding domain protein 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:67,869,870...67,884,501
Ensembl chr18:67,869,992...67,886,554
JBrowse link
G Mbd2 methyl-CpG binding domain protein 2 involved_in ISO
IBA
UniProtKB:Q13547 (PMID:23770133)
GO_REF:0000033
RGD
GO_Central
PMID:23770133 GO_REF:0000033 NCBI chr18:64,174,002...64,240,795
Ensembl chr18:64,174,002...64,240,794
JBrowse link
G Mbd3 methyl-CpG binding domain protein 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:9,312,961...9,320,166
Ensembl chr 7:9,313,098...9,320,165
JBrowse link
G Mbd3l1 methyl-CpG binding domain protein 3-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:16,150,539...16,160,463
Ensembl chr 8:16,153,472...16,160,404
JBrowse link
G Mbd3l2 methyl-CpG binding domain protein 3-like 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:15,607,477...15,614,046
Ensembl chr 8:15,611,214...15,612,563
JBrowse link
G Ppm1d protein phosphatase, Mg2+/Mn2+ dependent, 1D involved_in ISO (PMID:24135283) RGD PMID:24135283 NCBI chr10:70,172,603...70,208,607
Ensembl chr10:70,172,603...70,208,607
JBrowse link
G Setdb1 SET domain bifurcated histone lysine methyltransferase 1 involved_in ISO (PMID:24623306), (PMID:27732843)
(PMID:20164836)
RGD PMID:20164836 PMID:24623306 PMID:27732843 NCBI chr 2:182,898,738...182,930,283
Ensembl chr 2:182,898,738...182,930,506
JBrowse link
G Smarca5 SNF2 related chromatin remodeling ATPase 5 involved_in ISO (PMID:12198165) RGD PMID:12198165 NCBI chr19:27,271,918...27,304,594
Ensembl chr19:27,271,148...27,304,594
JBrowse link
G Tex15 testis expressed 15, meiosis and synapsis associated acts_upstream_of_or_within_positive_effect ISO (PMID:32381626) RGD PMID:32381626 NCBI chr16:58,598,991...58,659,005
Ensembl chr16:58,598,989...58,658,467
JBrowse link
G Trim28 tripartite motif-containing 28 involved_in ISO
ISS
(PMID:24623306)
(PMID:20164836)
GO_REF:0000024
RGD
UniProt
PMID:20164836 PMID:24623306 GO_REF:0000024 NCBI chr 1:73,652,441...73,659,388
Ensembl chr 1:73,652,709...73,659,380
JBrowse link
dosage compensation by inactivation of X chromosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bckdk branched chain ketoacid dehydrogenase kinase involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:182,515,335...182,520,007
Ensembl chr 1:182,515,327...182,536,633
JBrowse link
G Ftx FTX transcript, XIST regulator acts_upstream_of_or_within ISO (PMID:30237402) RGD PMID:30237402 NCBI chr  X:68,588,349...68,630,338 JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in ISO (PMID:20833368) RGD PMID:20833368 NCBI chr13:90,069,058...90,086,905
Ensembl chr13:90,074,181...90,086,588
JBrowse link
G Kat8 lysine acetyltransferase 8 involved_in IEA
ISO
GO_REF:0000107
(PMID:24842875)
Ensembl
RGD
PMID:24842875 GO_REF:0000107 NCBI chr 1:182,524,355...182,536,638
Ensembl chr 1:182,515,327...182,536,633
JBrowse link
G Lrif1 ligand dependent nuclear receptor interacting factor 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:23542155)
UniProt
Ensembl
RGD
PMID:23542155 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:194,231,397...194,322,489
Ensembl chr 2:194,230,951...194,322,483
JBrowse link
G Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (PMID:27602518) RGD PMID:27602518 NCBI chr15:25,002,505...25,014,097
Ensembl chr15:25,003,172...25,014,041
JBrowse link
G Rbm15 RNA binding motif protein 15 involved_in ISO (PMID:27602518) RGD PMID:27602518 NCBI chr 2:194,945,974...194,954,498
Ensembl chr 2:194,945,974...194,954,703
JBrowse link
G Rbm15b RNA binding motif protein 15B involved_in ISO (PMID:27602518) RGD PMID:27602518 NCBI chr 8:107,543,613...107,546,678
Ensembl chr 8:107,525,898...107,551,696
JBrowse link
G Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in ISO (PMID:23542155) RGD PMID:23542155 NCBI chr 9:111,243,445...111,387,272
Ensembl chr 9:111,247,702...111,349,665
JBrowse link
G Ythdc1 YTH N6-methyladenosine RNA binding protein C1 involved_in ISO
ISS
(PMID:27602518)
GO_REF:0000024
RGD
UniProt
PMID:27602518 GO_REF:0000024 NCBI chr14:21,185,438...21,215,934
Ensembl chr14:21,185,440...21,216,028
JBrowse link
facultative heterochromatin formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eed embryonic ectoderm development involved_in ISO (PMID:20064375), (PMID:20064376) RGD PMID:20064375 PMID:20064376 NCBI chr 1:143,867,875...143,895,008
Ensembl chr 1:143,867,875...143,894,974
JBrowse link
G Ehmt1 euchromatic histone lysine methyltransferase 1 involved_in ISO (PMID:19010785) RGD PMID:19010785 NCBI chr 3:7,580,680...7,729,046
Ensembl chr 3:7,580,683...7,729,007
JBrowse link
G Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit involved_in ISO (PMID:20064376) RGD PMID:20064376 NCBI chr10:86,126,023...86,162,001
Ensembl chr10:86,126,015...86,161,921
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in ISO (PMID:20064375), (PMID:20064376) RGD PMID:20064375 PMID:20064376 NCBI chr 4:76,624,399...76,687,362
Ensembl chr 4:76,624,399...76,687,362
JBrowse link
G Jarid2 jumonji and AT-rich interaction domain containing 2 involved_in ISO (PMID:19010785), (PMID:20064375), (PMID:20064376) RGD PMID:19010785 PMID:20064375 PMID:20064376 NCBI chr17:19,777,487...19,957,696
Ensembl chr17:19,777,266...19,955,690
JBrowse link
G Kdm5a lysine demethylase 5A involved_in ISO (PMID:20064375) RGD PMID:20064375 NCBI chr 4:153,565,909...153,643,912
Ensembl chr 4:153,565,846...153,642,422
JBrowse link
G Suz12 SUZ12 polycomb repressive complex 2 subunit involved_in ISO (PMID:20064375), (PMID:20064376) RGD PMID:20064375 PMID:20064376 NCBI chr10:64,967,035...65,012,916
Ensembl chr10:64,966,967...65,012,738
JBrowse link
gene silencing by piRNA-directed DNA methylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnmt3b DNA methyltransferase 3 beta acts_upstream_of_or_within ISO (PMID:27856912) RGD PMID:27856912 NCBI chr 3:142,130,588...142,169,128
Ensembl chr 3:142,130,592...142,169,124
JBrowse link
G Spocd1 SPOC domain containing 1 involved_in ISO (PMID:32674113) RGD PMID:32674113 NCBI chr 5:142,288,822...142,297,113 JBrowse link
global gene silencing by mRNA cleavage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clp1 cleavage factor polyribonucleotide kinase subunit 1 involved_in ISO
ISS
(PMID:17495927)
GO_REF:0000024
RGD
UniProt
PMID:17495927 GO_REF:0000024 NCBI chr 3:69,806,774...69,818,633
Ensembl chr 3:69,806,778...69,810,421
JBrowse link
G Dicer1 dicer 1 ribonuclease III involved_in ISO (PMID:15973356), (PMID:17452327) RGD PMID:15973356 PMID:17452327 NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
JBrowse link
G Tarbp2 Tarbp2 subunit of RISC loading complex involved_in ISO
IEA
ISS
(PMID:15973356)
GO_REF:0000104
GO_REF:0000024
RGD
UniProt
PMID:15973356 GO_REF:0000024 GO_REF:0000104 NCBI chr 7:133,649,118...133,654,306
Ensembl chr 7:133,649,090...133,654,314
JBrowse link
heterochromatin boundary formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trip12 thyroid hormone receptor interactor 12 involved_in ISO
ISS
(PMID:22884692)
GO_REF:0000024
RGD
UniProt
PMID:22884692 GO_REF:0000024 NCBI chr 9:85,916,691...86,043,312
Ensembl chr 9:85,916,691...86,051,403
JBrowse link
G Ubr5 ubiquitin protein ligase E3 component n-recognin 5 involved_in ISO
IEA
ISS
(PMID:22884692)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:22884692 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:69,115,216...69,224,843
Ensembl chr 7:69,116,761...69,224,903
JBrowse link
heterochromatin formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bahd1 bromo adjacent homology domain containing 1 involved_in ISO
IBA
(PMID:19666599)
GO_REF:0000033
RGD
GO_Central
PMID:19666599 GO_REF:0000033 NCBI chr 3:105,891,207...105,914,414
Ensembl chr 3:105,892,478...105,914,410
JBrowse link
G Bap1 BRCA1 associated deubiquitinase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:6,446,709...6,455,535
Ensembl chr16:6,446,709...6,455,535
JBrowse link
G Baz2a bromodomain adjacent to zinc finger domain, 2A acts_upstream_of_or_within
involved_in
ISO (PMID:16678107), (PMID:20168299) RGD PMID:16678107 PMID:20168299 NCBI chr 7:523,204...560,911
Ensembl chr 7:523,265...560,659
JBrowse link
G Bcl6 BCL6, transcription repressor acts_upstream_of_or_within ISO MGI:2135607 (PMID:23160044) RGD PMID:23160044 NCBI chr11:76,854,090...76,877,389
Ensembl chr11:76,854,090...76,877,389
JBrowse link
G Cbx1 chromobox 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:81,770,307...81,789,981
Ensembl chr10:81,770,342...81,791,096
JBrowse link
G Cbx3 chromobox 3 involved_in ISO
IBA
(PMID:17540172)
GO_REF:0000033
RGD
GO_Central
PMID:17540172 GO_REF:0000033 NCBI chr 4:80,545,450...80,559,284
Ensembl chr 4:80,546,010...80,559,283
Ensembl chr 4:80,546,010...80,559,283
JBrowse link
G Cbx5 chromobox 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:134,333,165...134,376,102
Ensembl chr 7:134,331,335...134,375,022
JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha acts_upstream_of_or_within ISO (PMID:22516971) RGD PMID:22516971 NCBI chr 6:26,791,517...26,902,161
Ensembl chr 6:26,822,609...26,896,687
JBrowse link
G Dnmt3b DNA methyltransferase 3 beta acts_upstream_of_or_within ISO (PMID:22516971) RGD PMID:22516971 NCBI chr 3:142,130,588...142,169,128
Ensembl chr 3:142,130,592...142,169,124
JBrowse link
G Eed embryonic ectoderm development involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:143,867,875...143,895,008
Ensembl chr 1:143,867,875...143,894,974
JBrowse link
G Efcc1 EF-hand and coiled-coil domain containing 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:120,188,202...120,223,464
Ensembl chr 4:120,188,470...120,217,516
JBrowse link
G ENSRNOG00000062927 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 2:183,779,559...183,809,469 JBrowse link
G ENSRNOG00000068602 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr17:42,718,263...42,722,997 JBrowse link
G ENSRNOG00000069033 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 7:78,933,181...78,934,754 JBrowse link
G Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit involved_in IBA
ISO
GO_REF:0000033
(PMID:19026781)
GO_Central
RGD
PMID:19026781 GO_REF:0000033 NCBI chr10:86,126,023...86,162,001
Ensembl chr10:86,126,015...86,161,921
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:76,624,399...76,687,362
Ensembl chr 4:76,624,399...76,687,362
JBrowse link
G H1f0 H1.0 linker histone involved_in ISO UniProtKB:P09429 (PMID:19158276) RGD PMID:19158276 NCBI chr 7:110,592,834...110,594,694
Ensembl chr 7:110,592,208...110,594,694
JBrowse link
G H2ab3 H2A.B variant histone 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:82,362,531...82,363,105
Ensembl chr  X:82,362,633...82,362,983
JBrowse link
G H2ac1 H2A clustered histone 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:41,171,324...41,171,801
Ensembl chr17:41,135,489...41,172,022
JBrowse link
G H2ac10 H2A clustered histone 10 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:41,570,532...41,571,020
Ensembl chr17:41,570,273...41,571,049
JBrowse link
G H2ac12 H2A clustered histone 12 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:42,486,415...42,486,880
Ensembl chr17:42,486,415...42,486,941
JBrowse link
G H2ac18 H2A clustered histone 18 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:183,808,398...183,808,992 JBrowse link
G H2ac20 H2A clustered histone 20 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:183,779,879...183,780,357 JBrowse link
G H2ac21 H2A clustered histone 21 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:183,779,355...183,779,788 JBrowse link
G H2ac23 H2A clustered histone 23 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:41,532,685...41,533,271
Ensembl chr17:42,478,860...42,479,252
Ensembl chr17:42,478,860...42,479,252
JBrowse link
G H2ac25 H2A clustered histone 25 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:43,733,702...43,735,254
Ensembl chr10:43,733,668...43,744,874
JBrowse link
G H2ac4 H2A clustered histone 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:42,799,884...42,800,387
Ensembl chr17:42,799,652...42,800,381
JBrowse link
G H2aj H2A.J histone involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:169,675,718...169,676,202
Ensembl chr 4:169,675,752...169,677,006
JBrowse link
G H2ax H2A.X variant histone involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:44,671,907...44,673,262
Ensembl chr 8:44,671,786...44,673,239
Ensembl chr 4:44,671,786...44,673,239
JBrowse link
G H2az1 H2A.Z variant histone 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:226,355,668...226,357,984
Ensembl chr 2:226,355,708...226,358,485
JBrowse link
G H2az1-ps2 H2A.Z variant histone 1, pseudogene 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:6,362,973...6,363,359
Ensembl chr 6:6,362,988...6,363,359
JBrowse link
G H2az2 H2A.Z variant histone 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:81,293,304...81,312,209
Ensembl chr14:81,293,299...81,312,144
Ensembl chr 4:81,293,299...81,312,144
Ensembl chr16:81,293,299...81,312,144
JBrowse link
G H2az2l1 H2A.Z histone variant 2 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:151,152,904...151,153,567
Ensembl chr 4:151,153,132...151,153,518
JBrowse link
G H2az2l2 H2A.Z histone variant 2 like 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:84,321,801...84,322,513
Ensembl chr 6:84,321,903...84,322,289
JBrowse link
G H2az2l3 H2A.Z histone variant 2 like 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:80,609,863...80,610,522
Ensembl chr18:80,609,861...80,610,556
JBrowse link
G Hdac1 histone deacetylase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:141,853,992...141,881,057
Ensembl chr 5:141,853,989...141,881,111
JBrowse link
G Hdac1l histone deacetylase 1-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:80,452,615...80,454,615
Ensembl chr 9:80,453,139...80,454,593
JBrowse link
G Hdac2 histone deacetylase 2 involved_in ISO
IBA
(PMID:19372552)
GO_REF:0000033
RGD
GO_Central
PMID:19372552 GO_REF:0000033 NCBI chr20:40,548,244...40,571,609
Ensembl chr20:40,548,250...40,571,609
JBrowse link
G Hdac8 histone deacetylase 8 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:67,385,288...67,593,014
Ensembl chr  X:67,385,289...67,592,923
JBrowse link
G Hells helicase, lymphoid specific acts_upstream_of_or_within ISO MGI:2178586 (PMID:15448183) RGD PMID:15448183 NCBI chr 1:236,701,704...236,748,239
Ensembl chr 1:236,701,758...236,746,844
JBrowse link
G Hils1 histone linker H1 domain, spermatid-specific 1 involved_in ISO (PMID:12920187) RGD PMID:12920187 NCBI chr10:79,913,525...79,914,321
Ensembl chr10:79,913,480...79,914,321
JBrowse link
G Hist1h2ac histone cluster 1 H2A family member C involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:42,478,836...42,479,306
Ensembl chr17:42,478,860...42,479,252
Ensembl chr17:42,478,860...42,479,252
JBrowse link
G Hist1h2af histone cluster 1 H2A family member F involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:41,379,404...41,379,796
Ensembl chr17:41,379,404...41,379,796
JBrowse link
G Hist1h2ah histone cluster 1 H2A family member H involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:41,384,521...41,385,018 JBrowse link
G Hist1h2ai histone cluster 1, H2ai involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:42,718,310...42,718,797
Ensembl chr17:41,534,691...41,539,869
Ensembl chr17:41,534,691...41,539,869
JBrowse link
G Hist1h2ail2 histone cluster 1, H2ai like 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:42,753,160...42,753,620
Ensembl chr17:41,534,691...41,539,869
Ensembl chr17:41,534,691...41,539,869
JBrowse link
G Hist1h2al1 histone cluster 1 H2A family like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:42,707,954...42,708,420 JBrowse link
G Hist1h2an histone cluster 1, H2an involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:41,534,653...41,535,259
Ensembl chr17:41,534,691...41,539,869
JBrowse link
G Hist1h2anl2 histone cluster 1, H2an like 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:42,696,845...42,697,423
Ensembl chr17:42,696,791...42,697,295
JBrowse link
G Hist2h2aa2 histone cluster 2 H2A family member A2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:183,801,308...183,801,891 JBrowse link
G Hmga2 high mobility group AT-hook 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:16901784)
UniProt
RGD
PMID:16901784 GO_REF:0000024 NCBI chr 7:55,877,145...55,998,813
Ensembl chr 7:55,880,112...55,994,784
JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO UniProtKB:P07305 (PMID:19158276) RGD PMID:19158276 NCBI chr12:5,972,950...5,979,658
Ensembl chr12:5,901,586...5,978,565
Ensembl chr16:5,901,586...5,978,565
JBrowse link
G Kmt2d lysine methyltransferase 2D involved_in ISO (PMID:20808952) RGD PMID:20808952 NCBI chr 7:129,980,744...130,022,088
Ensembl chr 7:129,962,887...130,020,325
JBrowse link
G L3mbtl1 L3MBTL histone methyl-lysine binding protein 1 involved_in ISO (PMID:17540172) RGD PMID:17540172 NCBI chr 3:151,597,903...151,633,657
Ensembl chr 3:151,602,980...151,631,233
JBrowse link
G Lmna lamin A/C involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:173,939,751...173,960,423
Ensembl chr 2:173,939,751...173,960,423
JBrowse link
G Lmnb1 lamin B1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:50,175,861...50,215,210
Ensembl chr18:50,175,874...50,214,502
JBrowse link
G Lmnb2 lamin B2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:8,792,628...8,808,665
Ensembl chr 7:8,789,314...8,808,665
JBrowse link
G LOC134478973 chromobox protein homolog 3-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G Macroh2a1 macroH2A.1 histone involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:8,479,331...8,542,071
Ensembl chr17:8,479,372...8,542,072
JBrowse link
G Macroh2a2 macroH2A.2 histone involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:29,678,194...29,727,867
Ensembl chr20:29,678,222...29,727,891
JBrowse link
G Mecp2 methyl CpG binding protein 2 acts_upstream_of_or_within ISO MGI:2137311 (PMID:15608638) RGD PMID:15608638 NCBI chr  X:151,781,177...151,844,687
Ensembl chr  X:151,789,930...151,844,689
JBrowse link
G Mis18a MIS18 kinetochore protein A acts_upstream_of_or_within ISO MGI:5441069 (PMID:22516971) RGD PMID:22516971 NCBI chr11:29,968,030...29,981,058
Ensembl chr11:29,967,701...29,981,062
JBrowse link
G Pole3 DNA polymerase epsilon 3, accessory subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:75,973,941...75,977,175
Ensembl chr 5:75,974,717...75,977,231
Ensembl chr 7:75,974,717...75,977,231
JBrowse link
G Rb1 RB transcriptional corepressor 1 involved_in ISO
IEA
(PMID:17540172)
GO_REF:0000107
RGD
Ensembl
PMID:17540172 GO_REF:0000107 NCBI chr15:48,371,295...48,502,473
Ensembl chr15:48,371,296...48,502,302
JBrowse link
G Sin3a SIN3 transcription regulator family member A involved_in ISO (PMID:22783022) RGD PMID:22783022 NCBI chr 8:57,481,539...57,536,195
Ensembl chr 8:57,481,573...57,536,192
JBrowse link
G Sirt1 sirtuin 1 involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:15469825)
GO_REF:0000033
MGI:107187 (PMID:23160044)
RGD
GO_Central
PMID:15469825 PMID:23160044 GO_REF:0000033 NCBI chr20:25,307,225...25,329,273
Ensembl chr20:25,306,917...25,329,260
JBrowse link
G Smarca5 SNF2 related chromatin remodeling ATPase 5 involved_in ISO (PMID:16678107) RGD PMID:16678107 NCBI chr19:27,271,918...27,304,594
Ensembl chr19:27,271,148...27,304,594
JBrowse link
G Spty2d1 SPT2 chromatin protein domain containing 1 involved_in ISO (PMID:26109053) RGD PMID:26109053 NCBI chr 1:97,531,495...97,549,616
Ensembl chr 1:97,531,508...97,549,581
JBrowse link
G Tnp1 transition protein 1 involved_in ISO
ISS
(PMID:11315969)
GO_REF:0000024
RGD
UniProt
PMID:11315969 GO_REF:0000024 NCBI chr 9:74,594,463...74,595,072
Ensembl chr 9:74,594,466...74,595,274
JBrowse link
G Ubr2 ubiquitin protein ligase E3 component n-recognin 2 involved_in ISO (PMID:20080676) RGD PMID:20080676 NCBI chr 9:13,982,427...14,062,315
Ensembl chr 9:13,982,329...14,062,139
JBrowse link
G Uhrf1 ubiquitin-like with PHD and ring finger domains 1 involved_in ISO
IEA
ISS
(PMID:17967883)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:17967883 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:1,133,117...1,154,639
Ensembl chr 9:1,134,909...1,154,631
JBrowse link
G Uty ubiquitously transcribed tetratricopeptide repeat containing, Y-linked acts_upstream_of_or_within ISO (PMID:22192413) RGD PMID:22192413 NCBI chr  Y:942,838...1,105,313
Ensembl chr  Y:924,168...1,103,422
JBrowse link
histone mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase involved_in ISO (PMID:16086026) RGD PMID:16086026 NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437
JBrowse link
G Dcp2 decapping mRNA 2 involved_in ISO (PMID:18172165) RGD PMID:18172165 NCBI chr18:36,750,732...36,787,067
Ensembl chr18:36,750,732...36,788,557
JBrowse link
G Eri1 exoribonuclease 1 NOT|involved_in ISS
ISO
GO_REF:0000024
(PMID:18172165)
UniProt
RGD
PMID:18172165 GO_REF:0000024 NCBI chr16:56,724,101...56,744,228
Ensembl chr16:56,724,115...56,744,226
JBrowse link
G Exosc10 exosome component 10 involved_in ISO
IBA
(PMID:18172165)
GO_REF:0000033
RGD
GO_Central
PMID:18172165 GO_REF:0000033 NCBI chr 5:158,995,313...159,018,940
Ensembl chr 5:158,995,313...159,018,940
JBrowse link
G Exosc4 exosome component 4 involved_in ISO (PMID:18172165) RGD PMID:18172165 NCBI chr 7:108,047,831...108,050,573
Ensembl chr 7:108,047,831...108,050,573
JBrowse link
G Lsm1 LSM1 homolog, mRNA degradation associated involved_in ISO (PMID:18172165) RGD PMID:18172165 NCBI chr16:66,277,345...66,288,852
Ensembl chr16:66,277,345...66,288,852
JBrowse link
G Mtpap mitochondrial poly(A) polymerase involved_in ISO (PMID:18172165) RGD PMID:18172165 NCBI chr17:53,320,739...53,341,500
Ensembl chr17:53,320,741...53,341,538
JBrowse link
G Tent2 terminal nucleotidyltransferase 2 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:18172165)
UniProt
Ensembl
RGD
PMID:18172165 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:24,380,135...24,432,099
Ensembl chr 2:24,380,225...24,432,099
JBrowse link
G Tent4b terminal nucleotidyltransferase 4B involved_in ISO (PMID:18172165) RGD PMID:18172165 NCBI chr19:18,807,616...18,868,969
Ensembl chr19:18,807,525...18,869,537
JBrowse link
G Tut1 terminal uridylyl transferase 1, U6 snRNA-specific NOT|involved_in ISS
ISO
GO_REF:0000024
(PMID:18172165)
UniProt
RGD
PMID:18172165 GO_REF:0000024 NCBI chr 1:205,848,691...205,859,767
Ensembl chr 1:205,848,772...205,859,764
JBrowse link
G Tut4 terminal uridylyl transferase 4 NOT|involved_in ISO (PMID:18172165) RGD PMID:18172165 NCBI chr 5:123,201,723...123,306,582
Ensembl chr 5:123,203,003...123,306,465
JBrowse link
G Tut7 terminal uridylyl transferase 7 NOT|involved_in ISO (PMID:18172165) RGD PMID:18172165 NCBI chr17:4,849,287...4,903,542
Ensembl chr17:4,849,283...4,903,169
JBrowse link
G Upf1 UPF1, RNA helicase and ATPase involved_in ISO (PMID:16086026) RGD PMID:16086026 NCBI chr16:19,076,594...19,097,365
Ensembl chr16:19,076,322...19,096,568
JBrowse link
G Xrn1 5'-3' exoribonuclease 1 involved_in ISO (PMID:18172165) RGD PMID:18172165 NCBI chr 8:96,527,871...96,637,385
Ensembl chr 8:96,528,195...96,632,739
JBrowse link
inactivation of paternal X chromosome by genomic imprinting term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prdm14 PR/SET domain 14 acts_upstream_of_or_within ISO MGI:3805889 (PMID:24268575) RGD PMID:24268575 NCBI chr 5:6,082,163...6,092,712
Ensembl chr 5:6,082,442...6,092,712
JBrowse link
G Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 acts_upstream_of_or_within ISO MGI:3586547 (PMID:18425126), (PMID:23754746) RGD PMID:18425126 PMID:23754746 NCBI chr 9:111,243,445...111,387,272
Ensembl chr 9:111,247,702...111,349,665
JBrowse link
G Xist X inactive specific transcript acts_upstream_of_or_within ISO MGI:1336196|MGI:2445460 (PMID:15992549), (PMID:22573614), (PMID:23658530) RGD PMID:15992549 PMID:22573614 PMID:23658530 NCBI chr  X:68,474,987...68,492,500 JBrowse link
lncRNA-mediated post-transcriptional gene silencing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elavl1 ELAV like RNA binding protein 1 involved_in ISO (PMID:22841487) RGD PMID:22841487 NCBI chr12:2,640,936...2,684,787
Ensembl chr12:2,645,061...2,684,784
JBrowse link
G Pvt1 Pvt1 oncogene involved_in ISO (PMID:28258379) RGD PMID:28258379 NCBI chr 7:93,656,528...93,879,938 JBrowse link
G Xist X inactive specific transcript involved_in ISO (PMID:29053187) RGD PMID:29053187 NCBI chr  X:68,474,987...68,492,500 JBrowse link
maternal mRNA clearance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lsm14b LSM family member 14B involved_in ISO (PMID:37889087) RGD PMID:37889087 NCBI chr 3:167,125,633...167,136,417
Ensembl chr 3:167,125,628...167,136,432
JBrowse link
miRNA processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adar adenosine deaminase, RNA-specific acts_upstream_of_or_within ISO MGI:3032487 (PMID:23622242) RGD PMID:23622242 NCBI chr 2:175,138,391...175,178,280
Ensembl chr 2:175,138,403...175,178,282
JBrowse link
G Ago1 argonaute RISC component 1 involved_in ISO (PMID:22795694) RGD PMID:22795694 NCBI chr 5:138,722,111...138,757,118
Ensembl chr 5:138,722,111...138,773,546
JBrowse link
G Ago2 argonaute RISC catalytic component 2 involved_in
acts_upstream_of_or_within
ISO (PMID:19966796), (PMID:23661684)
MGI:3056454 (PMID:20424607)
RGD PMID:19966796 PMID:20424607 PMID:23661684 NCBI chr 7:105,018,202...105,105,118
Ensembl chr 7:105,029,120...105,104,974
JBrowse link
G Ago3 argonaute RISC catalytic component 3 involved_in ISO (PMID:22795694) RGD PMID:22795694 NCBI chr 5:138,632,367...138,714,230
Ensembl chr 5:138,639,569...138,714,230
JBrowse link
G Ago4 argonaute RISC component 4 involved_in ISO (PMID:22795694) RGD PMID:22795694 NCBI chr 5:138,780,446...138,825,898
Ensembl chr 5:138,783,069...138,825,632
JBrowse link
G Dicer1 dicer 1 ribonuclease III involved_in
acts_upstream_of_or_within
ISO (PMID:15973356), (PMID:23322395), (PMID:23661684), (PMID:26435691)
(PMID:20463238), (PMID:20805985)
(PMID:24209619)
MGI:1926500|MGI:3589209|MGI:3589287|MGI:3622169 (PMID:15713842), (PMID:16040801), (PMID:16462742)
RGD PMID:15713842 PMID:15973356 PMID:16040801 PMID:16462742 PMID:20463238 More... NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
JBrowse link
G Nup155 nucleoporin 155 acts_upstream_of_or_within_positive_effect ISO (PMID:31481660) RGD PMID:31481660 NCBI chr 2:57,201,310...57,252,918
Ensembl chr 2:57,201,272...57,254,148
JBrowse link
G Prkra protein activator of interferon induced protein kinase EIF2AK2 involved_in ISO (PMID:23661684) RGD PMID:23661684 NCBI chr 3:61,575,447...61,594,393
Ensembl chr 3:61,575,447...61,594,347
JBrowse link
G Pum1 pumilio RNA-binding family member 1 involved_in ISO
IBA
(PMID:28431233)
GO_REF:0000033
RGD
GO_Central
PMID:28431233 GO_REF:0000033 NCBI chr 5:142,836,933...142,954,331
Ensembl chr 5:142,837,127...142,954,039
JBrowse link
G Pum2 pumilio RNA-binding family member 2 involved_in ISO
IBA
(PMID:28431233)
GO_REF:0000033
RGD
GO_Central
PMID:28431233 GO_REF:0000033 NCBI chr 6:31,462,879...31,542,976
Ensembl chr 6:31,462,872...31,542,976
JBrowse link
G Rbm3 RNA binding motif protein 3 acts_upstream_of_or_within ISO (PMID:15684048) RGD PMID:15684048 NCBI chr  X:14,348,909...14,352,387
Ensembl chr  X:14,348,910...14,353,580
JBrowse link
G Snip1 Smad nuclear interacting protein 1 involved_in ISO
IBA
ISS
(PMID:18632581)
GO_REF:0000033
GO_REF:0000024
RGD
GO_Central
UniProt
PMID:18632581 GO_REF:0000024 GO_REF:0000033 NCBI chr 5:137,328,371...137,335,846
Ensembl chr 5:137,328,371...137,335,845
JBrowse link
G Spout1 SPOUT domain containing methyltransferase 1 involved_in ISO
IBA
(PMID:28431233)
GO_REF:0000033
RGD
GO_Central
PMID:28431233 GO_REF:0000033 NCBI chr 3:13,451,191...13,458,918
Ensembl chr 3:13,451,202...13,493,355
JBrowse link
G Tarbp2 Tarbp2 subunit of RISC loading complex involved_in ISO (PMID:15973356), (PMID:23661684) RGD PMID:15973356 PMID:23661684 NCBI chr 7:133,649,118...133,654,306
Ensembl chr 7:133,649,090...133,654,314
JBrowse link
G Trim71 tripartite motif containing 71 involved_in ISO
ISS
(PMID:28431233)
GO_REF:0000024
RGD
UniProt
PMID:28431233 GO_REF:0000024 NCBI chr 8:114,193,439...114,250,807
Ensembl chr 8:114,199,187...114,250,807
JBrowse link
G Zc3h7a zinc finger CCCH type containing 7 A involved_in ISO
IBA
(PMID:28431233)
GO_REF:0000033
RGD
GO_Central
PMID:28431233 GO_REF:0000033 NCBI chr10:4,473,177...4,512,668
Ensembl chr10:4,473,203...4,512,665
JBrowse link
G Zc3h7b zinc finger CCCH-type containing 7B involved_in ISO
IBA
(PMID:28431233)
GO_REF:0000033
RGD
GO_Central
PMID:28431233 GO_REF:0000033 NCBI chr 7:113,262,142...113,310,399
Ensembl chr 7:113,262,165...113,310,399
JBrowse link
miRNA-mediated gene silencing by inhibition of translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago1 argonaute RISC component 1 involved_in ISO (PMID:18771919) RGD PMID:18771919 NCBI chr 5:138,722,111...138,757,118
Ensembl chr 5:138,722,111...138,773,546
JBrowse link
G Ago2 argonaute RISC catalytic component 2 involved_in IEA
ISO
ISS
GO_REF:0000104
(PMID:17671087), (PMID:18771919), (PMID:19801630), (PMID:23409027)
GO_REF:0000024
UniProt
RGD
PMID:17671087 PMID:18771919 PMID:19801630 PMID:23409027 GO_REF:0000024 GO_REF:0000104 NCBI chr 7:105,018,202...105,105,118
Ensembl chr 7:105,029,120...105,104,974
JBrowse link
G Ago3 argonaute RISC catalytic component 3 involved_in ISO (PMID:18771919) RGD PMID:18771919 NCBI chr 5:138,632,367...138,714,230
Ensembl chr 5:138,639,569...138,714,230
JBrowse link
G Ago4 argonaute RISC component 4 involved_in ISO (PMID:18771919) RGD PMID:18771919 NCBI chr 5:138,780,446...138,825,898
Ensembl chr 5:138,783,069...138,825,632
JBrowse link
G Ajuba ajuba LIM protein involved_in ISO
ISS
(PMID:20616046)
GO_REF:0000024
RGD
UniProt
PMID:20616046 GO_REF:0000024 NCBI chr15:28,019,775...28,031,537
Ensembl chr15:28,019,778...28,030,021
JBrowse link
G Ddx6 DEAD-box helicase 6 acts_upstream_of_positive_effect ISO (PMID:27342281) RGD PMID:27342281 NCBI chr 8:44,931,127...44,967,773
Ensembl chr 8:44,931,974...44,964,405
Ensembl chr 8:44,931,974...44,964,405
JBrowse link
G Eif4e2 eukaryotic translation initiation factor 4E family member 2 acts_upstream_of_positive_effect ISO (PMID:28487484) RGD PMID:28487484 NCBI chr 9:87,886,126...87,914,470
Ensembl chr 9:87,878,085...87,914,482
JBrowse link
G Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 acts_upstream_of_positive_effect ISO (PMID:24335285), (PMID:27342281), (PMID:28487484), (PMID:32354837) RGD PMID:24335285 PMID:27342281 PMID:28487484 PMID:32354837 NCBI chr14:78,056,115...78,099,846
Ensembl chr14:78,056,297...78,098,793
JBrowse link
G Eif6 eukaryotic translation initiation factor 6 involved_in ISO
ISS
(PMID:17507929)
GO_REF:0000024
RGD
UniProt
PMID:17507929 GO_REF:0000024 NCBI chr 3:144,325,038...144,331,396
Ensembl chr 3:144,325,036...144,331,401
JBrowse link
G Limd1 LIM domain containing 1 involved_in ISO
ISS
(PMID:20616046)
GO_REF:0000024
RGD
UniProt
PMID:20616046 GO_REF:0000024 NCBI chr 8:123,121,363...123,168,476
Ensembl chr 8:123,122,460...123,167,714
JBrowse link
G Mir1 microRNA 1 involved_in ISO (PMID:19933931), (PMID:21051663), (PMID:24804980) RGD PMID:19933931 PMID:21051663 PMID:24804980 NCBI chr18:1,887,537...1,887,623 JBrowse link
G Mir100 microRNA 100 involved_in ISO (PMID:27542871) RGD PMID:27542871 NCBI chr 8:41,901,225...41,901,304
Ensembl chr 8:41,901,225...41,901,304
JBrowse link
G Mir101-2 microRNA 101-2 involved_in ISO (PMID:21172309), (PMID:26022377) RGD PMID:21172309 PMID:26022377 NCBI chr 1:226,860,371...226,860,467
Ensembl chr 1:226,860,371...226,860,467
JBrowse link
G Mir101a microRNA 101a involved_in ISO (PMID:21172309), (PMID:26022377) RGD PMID:21172309 PMID:26022377 NCBI chr 5:115,966,332...115,966,406
Ensembl chr 5:115,966,328...115,966,410
JBrowse link
G Mir103a1 microRNA 103a-1 involved_in ISO RNAcentral:URS00005743AE_9606 (PMID:22723340), (PMID:30089260) RGD PMID:22723340 PMID:30089260 NCBI chr10:20,244,412...20,244,497
Ensembl chr10:20,244,412...20,244,497
JBrowse link
G Mir103a2 microRNA 103a-2 involved_in ISO RNAcentral:URS00005743AE_9606 (PMID:22723340), (PMID:30089260) RGD PMID:22723340 PMID:30089260 NCBI chr 3:118,510,194...118,510,279
Ensembl chr 3:118,510,194...118,510,279
JBrowse link
G Mir106a microRNA 106a involved_in ISO (PMID:18684319), (PMID:23399447), (PMID:23562609) RGD PMID:18684319 PMID:23399447 PMID:23562609 NCBI chr  X:132,422,584...132,422,661
Ensembl chr  X:132,422,584...132,422,661
JBrowse link
G Mir106b microRNA 106b involved_in ISO (PMID:19153141) RGD PMID:19153141 NCBI chr12:17,043,344...17,043,425
Ensembl chr12:17,043,344...17,043,425
JBrowse link
G Mir107 microRNA 107 involved_in ISO RNAcentral:URS0000476BE1_9606 (PMID:22723340), (PMID:30089260) RGD PMID:22723340 PMID:30089260 NCBI chr 1:232,337,767...232,337,853
Ensembl chr 1:232,337,767...232,337,853
JBrowse link
G Mir10b microRNA 10b involved_in ISO (PMID:19780876) RGD PMID:19780876 NCBI chr 3:59,628,438...59,628,546
Ensembl chr 3:59,628,438...59,628,546
JBrowse link
G Mir125a microRNA 125a involved_in
acts_upstream_of_or_within
ISO (PMID:22357933)
(PMID:22751012)
RGD PMID:22357933 PMID:22751012 NCBI chr 1:58,677,626...58,677,710
Ensembl chr 1:58,677,626...58,677,710
JBrowse link
G Mir125b1 microRNA 125b-1 involved_in ISO (PMID:21412257), (PMID:22391569) RGD PMID:21412257 PMID:22391569 NCBI chr 8:41,952,966...41,953,052
Ensembl chr 8:41,952,966...41,953,052
JBrowse link
G Mir125b2 microRNA 125b-2 involved_in ISO (PMID:21412257), (PMID:22391569) RGD PMID:21412257 PMID:22391569 NCBI chr11:16,245,620...16,245,707 JBrowse link
G Mir126a microRNA 126a involved_in ISO (PMID:20619534) RGD PMID:20619534 NCBI chr 3:9,415,063...9,415,180
Ensembl chr 3:9,415,063...9,415,180
JBrowse link
G Mir128-1 microRNA 128-1 involved_in ISO (PMID:23835497) RGD PMID:23835497 NCBI chr13:39,699,449...39,699,530
Ensembl chr13:39,699,449...39,699,530
JBrowse link
G Mir128-2 microRNA 128-2 involved_in ISO (PMID:23835497) RGD PMID:23835497 NCBI chr 8:112,085,467...112,085,550
Ensembl chr 8:112,085,467...112,085,550
JBrowse link
G Mir132 microRNA 132 involved_in ISO (PMID:20190813) RGD PMID:20190813 NCBI chr10:60,023,696...60,023,796
Ensembl chr10:60,023,696...60,023,796
JBrowse link
G Mir133b microRNA 133b involved_in ISO (PMID:23296701), (PMID:24443799), (PMID:25355491) RGD PMID:23296701 PMID:24443799 PMID:25355491 NCBI chr 9:23,098,134...23,098,217
Ensembl chr 9:23,098,134...23,098,217
JBrowse link
G Mir134 microRNA 134 involved_in ISO (PMID:26512644) RGD PMID:26512644 NCBI chr 6:128,748,908...128,748,980 JBrowse link
G Mir135b microRNA 135b involved_in ISO (PMID:24802670), (PMID:26184978) RGD PMID:24802670 PMID:26184978 NCBI chr13:43,638,857...43,638,953
Ensembl chr13:43,638,857...43,638,953
JBrowse link
G Mir138-1 microRNA 138-1 involved_in ISO (PMID:20232393), (PMID:21444814) RGD PMID:20232393 PMID:21444814 NCBI chr 8:122,300,966...122,301,064
Ensembl chr 8:122,300,966...122,301,064
JBrowse link
G Mir138-2 microRNA 138-2 involved_in ISO (PMID:20232393), (PMID:21444814) RGD PMID:20232393 PMID:21444814 NCBI chr19:10,674,193...10,674,274
Ensembl chr19:10,674,193...10,674,274
JBrowse link
G Mir141 microRNA 141 involved_in ISO RNAcentral:URS0000192F9C_9606 (PMID:21224847) RGD PMID:21224847 NCBI chr 4:157,523,239...157,523,332
Ensembl chr 4:157,523,239...157,523,332
JBrowse link
G Mir143 microRNA 143 acts_upstream_of_or_within ISO (PMID:21441927) RGD PMID:21441927 NCBI chr18:55,101,006...55,101,110
Ensembl chr18:55,101,006...55,101,110
JBrowse link
G Mir144 microRNA 144 involved_in ISO (PMID:27329039) RGD PMID:27329039 NCBI chr10:62,961,348...62,961,430
Ensembl chr10:62,961,348...62,961,430
JBrowse link
G Mir145 microRNA 145 involved_in ISO (PMID:19360360), (PMID:20737575), (PMID:23076445) RGD PMID:19360360 PMID:20737575 PMID:23076445 NCBI chr18:55,099,640...55,099,727
Ensembl chr18:55,099,640...55,099,727
JBrowse link
G Mir146a microRNA 146a involved_in ISO (PMID:27221467), (PMID:27241555) RGD PMID:27221467 PMID:27241555 NCBI chr10:27,848,516...27,848,610
Ensembl chr10:27,848,516...27,848,610
JBrowse link
G Mir148a microRNA 148a involved_in ISO (PMID:18268015) RGD PMID:18268015 NCBI chr 4:80,333,762...80,333,858
Ensembl chr 4:80,333,762...80,333,858
JBrowse link
G Mir148b microRNA 148b involved_in ISO (PMID:23233531) RGD PMID:23233531 NCBI chr 7:134,421,398...134,421,494
Ensembl chr 7:134,421,398...134,421,494
JBrowse link
G Mir15b microRNA 15b involved_in ISO RNAcentral:URS00004BCD9C_9606|UniProtKB:P01308 (PMID:25403480), (PMID:26179126) RGD PMID:25403480 PMID:26179126 NCBI chr 2:153,245,200...153,245,297
Ensembl chr 2:153,245,200...153,245,297
JBrowse link
G Mir16-2 microRNA 16-2 involved_in ISO RNAcentral:URS00004AD914_9606|UniProtKB:P01308 (PMID:23233752), (PMID:25403480) RGD PMID:23233752 PMID:25403480 NCBI chr 2:153,245,349...153,245,443
Ensembl chr 2:153,245,349...153,245,443
JBrowse link
G Mir17 microRNA 17 involved_in ISO (PMID:19390056), (PMID:23399447), (PMID:23562609) RGD PMID:19390056 PMID:23399447 PMID:23562609 NCBI chr15:92,180,629...92,180,712
Ensembl chr15:92,180,629...92,180,712
JBrowse link
G Mir181a2 microRNA 181a-2 involved_in ISO (PMID:23993976) RGD PMID:23993976 NCBI chr 3:22,615,845...22,615,961
Ensembl chr 3:22,615,845...22,615,961
JBrowse link
G Mir181b1 microRNA 181b-1 involved_in ISO (PMID:23993976), (PMID:25762865) RGD PMID:23993976 PMID:25762865 NCBI chr13:49,485,688...49,485,797
Ensembl chr13:49,485,688...49,485,797
JBrowse link
G Mir181b2 microRNA 181b-2 involved_in ISO (PMID:23993976), (PMID:25762865) RGD PMID:23993976 PMID:25762865 NCBI chr 3:22,616,948...22,617,035
Ensembl chr 3:22,616,948...22,617,035
JBrowse link
G Mir181c microRNA 181c involved_in ISO (PMID:21112091) RGD PMID:21112091 NCBI chr19:23,983,523...23,983,628
Ensembl chr19:23,983,523...23,983,628
JBrowse link
G Mir181d microRNA 181d involved_in ISO (PMID:23993976) RGD PMID:23993976 NCBI chr19:23,983,706...23,983,788
Ensembl chr19:23,983,706...23,983,788
JBrowse link
G Mir182 microRNA 182 involved_in ISO (PMID:23823476) RGD PMID:23823476 NCBI chr 4:58,784,818...58,784,879
Ensembl chr 4:58,784,818...58,784,879
JBrowse link
G Mir186 microRNA 186 acts_upstream_of_or_within ISO (PMID:32109384) RGD PMID:32109384 NCBI chr 2:246,582,806...246,582,891
Ensembl chr 2:246,582,806...246,582,891
JBrowse link
G Mir19b1 microRNA 19b-1 involved_in ISO (PMID:21796614), (PMID:22105995) RGD PMID:21796614 PMID:22105995 NCBI chr15:92,181,214...92,181,300
Ensembl chr15:92,181,214...92,181,300
JBrowse link
G Mir19b2 microRNA 19b-2 involved_in ISO (PMID:21796614), (PMID:22105995) RGD PMID:21796614 PMID:22105995 NCBI chr  X:132,422,072...132,422,167
Ensembl chr  X:132,422,072...132,422,167
JBrowse link
G Mir1a-1 microRNA 1a-1 involved_in ISO (PMID:19933931), (PMID:21051663), (PMID:24804980) RGD PMID:19933931 PMID:21051663 PMID:24804980 NCBI chr 3:167,487,117...167,487,201
Ensembl chr 3:167,487,117...167,487,201
JBrowse link
G Mir200b microRNA 200b involved_in ISO (PMID:30923833) RGD PMID:30923833 NCBI chr 5:166,649,272...166,649,366
Ensembl chr 5:166,649,272...166,649,366
JBrowse link
G Mir200c microRNA 200c involved_in ISO RNAcentral:URS000003E1A9_9606 (PMID:21224847), (PMID:29331391), (PMID:30923833) RGD PMID:21224847 PMID:29331391 PMID:30923833 NCBI chr 4:157,523,679...157,523,747 JBrowse link
G Mir204 microRNA 204 involved_in ISO (PMID:22982025), (PMID:23221074) RGD PMID:22982025 PMID:23221074 NCBI chr 1:220,316,931...220,317,040
Ensembl chr 1:220,316,931...220,317,040
JBrowse link
G Mir205 microRNA 205 involved_in ISO (PMID:19665999), (PMID:23800974), (PMID:25012146), (PMID:26781079), (PMID:30923833) RGD PMID:19665999 PMID:23800974 PMID:25012146 PMID:26781079 PMID:30923833 NCBI chr13:105,035,878...105,035,985
Ensembl chr13:105,035,878...105,035,985
JBrowse link
G Mir208a microRNA 208a involved_in ISO (PMID:20190813) RGD PMID:20190813 NCBI chr15:28,425,570...28,425,652 JBrowse link
G Mir20a microRNA 20a involved_in ISO (PMID:19390056), (PMID:23562609) RGD PMID:19390056 PMID:23562609 NCBI chr15:92,181,084...92,181,168
Ensembl chr15:92,181,084...92,181,168
JBrowse link
G Mir21 microRNA 21 involved_in ISO (PMID:17363372), (PMID:18372920), (PMID:18384814), (PMID:19013014), (PMID:20826792), (PMID:21078976), (PMID:21328460), (PMID:21562928), (PMID:21636785), (PMID:21817107), (PMID:22034194), (PMID:23578931), (PMID:25327529), (PMID:27895788), (PMID:28270521) RGD PMID:17363372 PMID:18372920 PMID:18384814 PMID:19013014 PMID:20826792 More... NCBI chr10:71,902,600...71,902,691
Ensembl chr10:71,405,257...71,405,348
JBrowse link
G Mir210 microRNA 210 involved_in ISO (PMID:18417479) RGD PMID:18417479 NCBI chr 1:196,326,343...196,326,452
Ensembl chr 1:196,326,337...196,326,454
JBrowse link
G Mir212 microRNA 212 involved_in ISO (PMID:22880819) RGD PMID:22880819 NCBI chr10:60,023,403...60,023,513
Ensembl chr10:60,023,403...60,023,513
JBrowse link
G Mir214 microRNA 214 involved_in ISO (PMID:22336710) RGD PMID:22336710 NCBI chr13:74,588,374...74,588,481
Ensembl chr13:74,588,372...74,588,481