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ONTOLOGY REPORT - ANNOTATIONS

Term:chromocenter
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Accession:GO:0010369 term browser browse the term
Definition:A region in which centric, heterochromatic portions from more than one chromosomes form a compact structure.

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chromocenter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aurkb aurora kinase B located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:1,435,601...1,437,423
Ensembl chrNW_004936595:1,435,852...1,440,351 		JBrowse link
G Cbx1 chromobox 1 located_in ISO (PMID:15322135), (PMID:17261847) MGI PMID:15322135 PMID:17261847 NCBI chrNW_004936490:13,242,949...13,261,195
Ensembl chrNW_004936490:13,242,949...13,261,195 		JBrowse link
G Cbx3 chromobox 3 located_in ISO (PMID:15322135) MGI PMID:15322135 NCBI chrNW_004936478:2,981,218...2,989,329
Ensembl chrNW_004936478:2,981,228...2,989,324 		JBrowse link
G Cbx5 chromobox 5 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:11,441,770...11,480,924
Ensembl chrNW_004936512:11,450,060...11,480,727 		JBrowse link
G Cdca8 cell division cycle associated 8 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:19,895,681...19,912,451
Ensembl chrNW_004936474:19,895,640...19,912,933 		JBrowse link
G Esco2 establishment of sister chromatid cohesion N-acetyltransferase 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936675:670,915...697,696
Ensembl chrNW_004936675:670,915...697,668 		JBrowse link
G Fmr1 Fragile X messenger ribonucleoprotein 1 located_in ISO (PMID:24813610) UniProt PMID:24813610 NCBI chrNW_004936513:1,290,038...1,327,850
Ensembl chrNW_004936513:1,289,558...1,327,856 		JBrowse link
G Incenp inner centromere protein located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936581:999,148...1,028,157
Ensembl chrNW_004936581:999,497...1,025,062 		JBrowse link
G LOC101974652 PWWP domain-containing protein 2A-like located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004938008:6...1,284 JBrowse link
G Mbd5 methyl-CpG binding domain protein 5 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936469:28,748,499...28,889,679
Ensembl chrNW_004936469:28,744,814...28,802,776 		JBrowse link
G Mbd6 methyl-CpG binding domain protein 6 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936646:1,669,281...1,678,512 JBrowse link
G Oip5 Opa interacting protein 5 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:4,692,482...4,705,643
Ensembl chrNW_004936471:4,692,099...4,705,984 		JBrowse link
G Pwwp2a PWWP domain containing 2A located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936515:3,399,339...3,436,003 JBrowse link
G Sall1 spalt like transcription factor 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:4,106,663...4,121,356
Ensembl chrNW_004936475:4,106,084...4,121,413 		JBrowse link
G Scmh1 Scm polycomb group protein homolog 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:22,648,156...22,784,399
Ensembl chrNW_004936474:22,647,334...22,774,405 		JBrowse link
G Sox30 SRY-box transcription factor 30 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936515:5,501,315...5,537,946
Ensembl chrNW_004936515:5,458,393...5,537,946 		JBrowse link
G Taf7l TATA-box binding protein associated factor 7 like NOT|located_in ISO (PMID:12665565) MGI PMID:12665565 NCBI chrNW_004936813:357,571...378,479
Ensembl chrNW_004936813:357,571...372,736 		JBrowse link
G Trim66 tripartite motif containing 66 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936528:9,358,976...9,410,425
Ensembl chrNW_004936528:9,358,950...9,529,842 		JBrowse link
perinucleolar chromocenter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Piwil2 piwi like RNA-mediated gene silencing 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936555:6,078,681...6,133,184
Ensembl chrNW_004936555:6,078,681...6,133,020 		JBrowse link
G Tinf2 TERF1 interacting nuclear factor 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936722:320,171...323,703
Ensembl chrNW_004936722:320,917...324,492 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 18223
    cellular anatomical structure 18002
      organelle 13362
        membraneless organelle 4797
          intracellular membraneless organelle 4797
            chromocenter 20
              perinucleolar chromocenter 2
              polytene chromosome chromocenter + 0
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