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ONTOLOGY REPORT - ANNOTATIONS

Term:chromocenter
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Accession:GO:0010369 term browser browse the term
Definition:A region in which centric, heterochromatic portions from more than one chromosomes form a compact structure.


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chromocenter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AURKB aurora kinase B located_in IEA Ensembl GO_REF:0000107 NCBI chr12:53,410,833...53,426,165
Ensembl chr12:53,410,177...53,423,225 		JBrowse link
G CBX1 chromobox 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr12:24,319,104...24,351,057
Ensembl chr12:24,315,518...24,351,052 		JBrowse link
G CBX3 chromobox 3 located_in ISO (PMID:15322135) MGI PMID:15322135 NCBI chr18:46,193,138...46,205,114
Ensembl chr18:46,193,140...46,204,714 		JBrowse link
G CBX5 chromobox 5 located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:19,446,083...19,484,527
Ensembl chr 5:19,446,086...19,484,463 		JBrowse link
G CDCA8 cell division cycle associated 8 located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:93,750,694...93,764,845
Ensembl chr 6:93,750,689...93,764,836 		JBrowse link
G ESCO2 establishment of sister chromatid cohesion N-acetyltransferase 2 located_in ISO (PMID:22101327) MGI PMID:22101327 NCBI chr14:11,495,297...11,532,898 JBrowse link
G FMR1 Fragile X messenger ribonucleoprotein 1 located_in ISO (PMID:24813610) UniProt PMID:24813610 NCBI chr  X:120,361,232...120,400,282
Ensembl chr  X:120,361,367...120,399,831 		JBrowse link
G INCENP inner centromere protein located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:9,411,942...9,445,825
Ensembl chr 2:9,411,942...9,445,821 		JBrowse link
G MBD5 methyl-CpG binding domain protein 5 located_in
is_active_in		 ISO
IBA		 (PMID:20700456) UniProt
GO_Central		 PMID:20700456 GO_REF:0000033 NCBI chr15:3,649,859...4,096,459
Ensembl chr15:3,659,012...3,725,208 		JBrowse link
G MBD6 methyl-CpG binding domain protein 6 located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:22,790,220...22,799,131
Ensembl chr 5:22,791,437...22,799,126 		JBrowse link
G OIP5 Opa interacting protein 5 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:130,036,478...130,054,058
Ensembl chr 1:130,036,480...130,047,041 		JBrowse link
G SALL1 spalt like transcription factor 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:33,731,666...33,748,698
Ensembl chr 6:33,732,025...33,748,704 		JBrowse link
G SCMH1 Scm polycomb group protein homolog 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:169,999,763...170,189,357
Ensembl chr 6:169,999,792...170,189,353 		JBrowse link
G SOX30 SRY-box transcription factor 30 located_in IEA Ensembl GO_REF:0000107 NCBI chr16:65,642,107...65,677,693
Ensembl chr16:65,642,223...65,678,047 		JBrowse link
G TAF7L TATA-box binding protein associated factor 7 like NOT|located_in ISO (PMID:12665565) MGI PMID:12665565 NCBI chr  X:82,930,258...82,951,065
Ensembl chr  X:82,930,266...82,951,224 		JBrowse link
G TRIM66 tripartite motif containing 66 located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:711,571...769,799
Ensembl chr 9:738,551...764,472 		JBrowse link
perinucleolar chromocenter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PIWIL2 piwi like RNA-mediated gene silencing 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr14:6,560,402...6,632,524
Ensembl chr14:6,560,565...6,632,523 		JBrowse link
G TINF2 TERF1 interacting nuclear factor 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:75,056,790...75,067,895
Ensembl chr 7:75,056,798...75,063,979 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 19750
    cellular anatomical structure 19505
      organelle 13514
        membraneless organelle 4972
          intracellular membraneless organelle 4972
            chromocenter 18
              perinucleolar chromocenter 2
              polytene chromosome chromocenter + 0
paths to the root