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ONTOLOGY REPORT - ANNOTATIONS

Term:chromocenter
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Accession:GO:0010369 term browser browse the term
Definition:A region in which centric, heterochromatic portions from more than one chromosomes form a compact structure.


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chromocenter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aurkb aurora kinase B located_in IDA (PMID:19283064) MGI PMID:19283064 NCBI chr11:68,936,477...68,942,490
Ensembl chr11:68,936,473...68,942,490 		JBrowse link
G Cbx1 chromobox 1 located_in IDA (PMID:15322135), (PMID:17261847) MGI PMID:15322135 PMID:17261847 NCBI chr11:96,679,506...96,699,808
Ensembl chr11:96,679,953...96,699,466 		JBrowse link
G Cbx3 chromobox 3 located_in IDA (PMID:15322135) MGI PMID:15322135 NCBI chr 6:51,447,596...51,460,684
Ensembl chr 6:51,447,340...51,460,684 		JBrowse link
G Cbx5 chromobox 5 located_in IDA (PMID:17284516), (PMID:20219459), (PMID:22101327) MGI PMID:17284516 PMID:20219459 PMID:22101327 NCBI chr15:103,099,973...103,148,337
Ensembl chr15:103,099,971...103,148,243 		JBrowse link
G Cdca8 cell division cycle associated 8 located_in IDA (PMID:19283064) MGI PMID:19283064 NCBI chr 4:124,812,258...124,830,710
Ensembl chr 4:124,812,258...124,833,104 		JBrowse link
G Esco2 establishment of sister chromatid cohesion N-acetyltransferase 2 located_in IDA (PMID:22101327) MGI PMID:22101327 NCBI chr14:66,056,476...66,071,418
Ensembl chr14:66,056,487...66,071,443 		JBrowse link
G Fmr1 fragile X messenger ribonucleoprotein 1 located_in IDA (PMID:24813610) UniProt PMID:24813610 NCBI chr  X:67,722,144...67,761,569
Ensembl chr  X:67,722,147...67,761,569 		JBrowse link
G Incenp inner centromere protein located_in IDA (PMID:19283064) MGI PMID:19283064 NCBI chr19:9,849,659...9,876,853
Ensembl chr19:9,849,660...9,876,915 		JBrowse link
G Mbd5 methyl-CpG binding domain protein 5 located_in
is_active_in		 ISO
IBA		 GO_Central GO_REF:0000033 GO_REF:0000119 NCBI chr 2:48,839,511...49,209,702
Ensembl chr 2:48,839,520...49,215,417 		JBrowse link
G Mbd6 methyl-CpG binding domain protein 6 located_in
is_active_in		 ISO
IBA		 GO_Central GO_REF:0000033 GO_REF:0000119 NCBI chr10:127,117,825...127,126,738
Ensembl chr10:127,117,825...127,124,887 		JBrowse link
G Oip5 Opa interacting protein 5 located_in IDA (PMID:17284516) MGI PMID:17284516 NCBI chr 2:119,440,013...119,448,986
Ensembl chr 2:119,439,993...119,448,950 		JBrowse link
G Sall1 spalt like transcription factor 1 located_in ISO GO_Central GO_REF:0000119 NCBI chr 8:89,753,867...89,770,790
Ensembl chr 8:89,753,863...89,770,790 		JBrowse link
G Scmh1 Scm polycomb group homolog 1 located_in IDA (PMID:17215307) MGI PMID:17215307 NCBI chr 4:120,262,347...120,387,397
Ensembl chr 4:120,262,478...120,387,383 		JBrowse link
G Sox30 SRY (sex determining region Y)-box 30 located_in IDA (PMID:29848638) UniProt PMID:29848638 NCBI chr11:45,869,873...45,908,824
Ensembl chr11:45,871,137...45,908,821 		JBrowse link
G Taf7l TATA-box binding protein associated factor 7 like NOT|located_in IDA (PMID:12665565) MGI PMID:12665565 NCBI chr  X:133,360,865...133,377,254
Ensembl chr  X:133,360,867...133,377,239 		JBrowse link
G Trim66 tripartite motif-containing 66 located_in IDA (PMID:15322135) MGI PMID:15322135 NCBI chr 7:109,048,208...109,115,948
Ensembl chr 7:109,048,213...109,107,341 		JBrowse link
perinucleolar chromocenter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Piwil2 piwi-like RNA-mediated gene silencing 2 located_in IDA (PMID:21539824) MGI PMID:21539824 NCBI chr14:70,609,926...70,674,338
Ensembl chr14:70,609,926...70,666,832 		JBrowse link
G Tinf2 Terf1 (TRF1)-interacting nuclear factor 2 located_in ISO GO_Central GO_REF:0000119 NCBI chr14:55,912,120...55,919,265
Ensembl chr14:55,912,146...55,919,277 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 28568
    cellular anatomical structure 19603
      organelle 13749
        membraneless organelle 5095
          intracellular membraneless organelle 5095
            chromocenter 18
              perinucleolar chromocenter 2
              polytene chromosome chromocenter + 0
paths to the root