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ONTOLOGY REPORT - ANNOTATIONS

Term:chromocenter
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Accession:GO:0010369 term browser browse the term
Definition:A region in which centric, heterochromatic portions from more than one chromosomes form a compact structure.


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chromocenter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AURKB aurora kinase B located_in ISO (PMID:19283064) MGI PMID:19283064 NCBI chr 5:33,014,098...33,028,951
Ensembl chr 5:33,014,102...33,033,948 		JBrowse link
G CBX1 chromobox 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:24,363,566...24,369,060
Ensembl chr 9:24,358,885...24,369,060 		JBrowse link
G CBX3 chromobox 3 located_in ISO (PMID:15322135) MGI PMID:15322135 NCBI chr14:39,510,694...39,520,796
Ensembl chr14:39,510,112...39,519,809 		JBrowse link
G CBX5 chromobox 5 located_in IEA Ensembl GO_REF:0000107 NCBI chr27:1,020,500...1,058,027
Ensembl chr27:1,039,594...1,049,788 		JBrowse link
G CDCA8 cell division cycle associated 8 located_in IEA Ensembl GO_REF:0000107 NCBI chr15:4,796,980...4,809,914
Ensembl chr15:4,798,197...4,809,658 		JBrowse link
G ESCO2 establishment of sister chromatid cohesion N-acetyltransferase 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr25:29,785,641...29,812,536
Ensembl chr25:29,787,132...29,811,112 		JBrowse link
G FMR1 Fragile X messenger ribonucleoprotein 1 located_in ISO (PMID:24813610) UniProt PMID:24813610 NCBI chr  X:116,249,079...116,287,008
Ensembl chr  X:116,249,142...116,321,439 		JBrowse link
G INCENP inner centromere protein located_in IEA Ensembl GO_REF:0000107 NCBI chr18:54,361,376...54,384,649
Ensembl chr18:54,361,378...54,384,641 		JBrowse link
G MBD5 methyl-CpG binding domain protein 5 located_in
is_active_in		 ISO
IBA		 (PMID:20700456) UniProt
GO_Central		 PMID:20700456 GO_REF:0000033 NCBI chr19:49,815,388...50,250,071
Ensembl chr19:50,186,364...50,247,398 		JBrowse link
G MBD6 methyl-CpG binding domain protein 6 located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr10:1,611,462...1,620,546
Ensembl chr10:1,613,643...1,619,745 		JBrowse link
G OIP5 Opa interacting protein 5 located_in IEA Ensembl GO_REF:0000107 NCBI chr30:8,377,407...8,396,222
Ensembl chr30:8,381,395...8,396,096 		JBrowse link
G SALL1 spalt like transcription factor 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:64,242,742...64,260,021
Ensembl chr 2:64,243,987...64,259,521 		JBrowse link
G SCMH1 Scm polycomb group protein homolog 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr15:1,917,503...2,056,325
Ensembl chr15:1,917,509...2,058,904 		JBrowse link
G SOX30 SRY-box transcription factor 30 located_in IEA Ensembl GO_REF:0000107 NCBI chr 4:52,587,163...52,615,945
Ensembl chr 4:52,587,355...52,615,945 		JBrowse link
G TAF7L TATA-box binding protein associated factor 7 like NOT|located_in ISO (PMID:12665565) MGI PMID:12665565 NCBI chr  X:75,219,448...75,238,309
Ensembl chr  X:75,220,248...75,239,041 		JBrowse link
G TRIM66 tripartite motif containing 66 located_in IEA Ensembl GO_REF:0000107 NCBI chr21:32,037,874...32,097,362
Ensembl chr21:32,044,841...32,097,357 		JBrowse link
perinucleolar chromocenter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PIWIL2 piwi like RNA-mediated gene silencing 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr25:34,911,120...34,987,287
Ensembl chr25:34,912,358...34,987,339 		JBrowse link
G TINF2 TERF1 interacting nuclear factor 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 8:4,221,183...4,223,863
Ensembl chr 8:4,221,269...4,223,512 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 23074
    cellular anatomical structure 22784
      organelle 17403
        membraneless organelle 6085
          intracellular membraneless organelle 6085
            chromocenter 18
              perinucleolar chromocenter 2
              polytene chromosome chromocenter + 0
paths to the root