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ONTOLOGY REPORT - ANNOTATIONS

Term:chromocenter
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Accession:GO:0010369 term browser browse the term
Definition:A region in which centric, heterochromatic portions from more than one chromosomes form a compact structure.


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chromocenter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AURKB aurora kinase B located_in IEA Ensembl GO_REF:0000107 NCBI chr17:43,447,661...43,453,864
Ensembl chr17:48,180,066...48,186,129 		JBrowse link
G CBX1 chromobox 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr17:9,434,141...9,467,865 JBrowse link
G CBX3 chromobox 3 located_in ISO (PMID:15322135) MGI PMID:15322135 NCBI chr 7:26,847,247...26,859,339
Ensembl chr 7:26,450,411...26,462,350 		JBrowse link
G CBX5 chromobox 5 located_in IEA Ensembl GO_REF:0000107 NCBI chr12:34,463,826...34,521,656
Ensembl chr12:35,218,239...35,236,009 		JBrowse link
G CDCA8 cell division cycle associated 8 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:36,965,470...36,982,761
Ensembl chr 1:38,314,597...38,331,625 		JBrowse link
G ESCO2 establishment of sister chromatid cohesion N-acetyltransferase 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 8:27,049,858...27,080,396
Ensembl chr 8:24,251,557...24,284,001 		JBrowse link
G FMR1 fragile X messenger ribonucleoprotein 1 located_in ISO (PMID:24813610) UniProt PMID:24813610 NCBI chr  X:136,937,889...136,976,828
Ensembl chr  X:147,365,748...147,405,321 		JBrowse link
G INCENP inner centromere protein located_in IEA Ensembl GO_REF:0000107 NCBI chr11:57,488,790...57,519,552
Ensembl chr11:60,846,199...60,874,540 		JBrowse link
G MBD5 methyl-CpG binding domain protein 5 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr2B:11,347,218...11,842,644
Ensembl chr2B:152,754,368...152,874,042 		JBrowse link
G MBD6 methyl-CpG binding domain protein 6 located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr12:31,396,733...31,404,126
Ensembl chr12:31,655,461...31,664,638 		JBrowse link
G OIP5 Opa interacting protein 5 located_in IEA Ensembl GO_REF:0000107 NCBI chr15:20,250,339...20,273,856
Ensembl chr15:38,494,534...38,517,300 		JBrowse link
G PWWP2A PWWP domain containing 2A located_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:155,452,698...155,509,961
Ensembl chr 5:162,085,988...162,130,604 		JBrowse link
G SALL1 spalt like transcription factor 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr16:31,396,399...31,412,753
Ensembl chr16:50,274,090...50,284,819 		JBrowse link
G SCMH1 Scm polycomb group protein homolog 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:40,323,101...40,540,236
Ensembl chr 1:41,639,127...41,776,261 		JBrowse link
G SOX30 SRY-box transcription factor 30 located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:153,022,109...153,067,734
Ensembl chr 5:159,640,126...159,737,776 		JBrowse link
G TAF7L TATA-box binding protein associated factor 7 like NOT|located_in ISO (PMID:12665565) MGI PMID:12665565 NCBI chr  X:90,471,354...90,496,618
Ensembl chr  X:100,607,488...100,631,301 		JBrowse link
G TRIM66 tripartite motif containing 66 located_in IEA Ensembl GO_REF:0000107 NCBI chr11:8,739,892...8,807,121
Ensembl chr11:8,485,319...8,519,067 		JBrowse link
perinucleolar chromocenter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PIWIL2 piwi like RNA-mediated gene silencing 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 8:21,520,166...21,608,374
Ensembl chr 8:18,463,173...18,544,186 		JBrowse link
G TINF2 TERF1 interacting nuclear factor 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr14:5,015,862...5,019,228
Ensembl chr14:23,139,445...23,142,825 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20468
    cellular anatomical structure 20035
      organelle 14984
        membraneless organelle 5824
          intracellular membraneless organelle 5824
            chromocenter 19
              perinucleolar chromocenter 2
              polytene chromosome chromocenter + 0
paths to the root