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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of catabolic process
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Accession:GO:0009894 term browser browse the term
Definition:Any process that modulates the frequency, rate, or extent of the chemical reactions and pathways resulting in the breakdown of substances.
Synonyms:exact_synonym: regulation of breakdown;   regulation of catabolism;   regulation of degradation



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3'-UTR-mediated mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 involved_in ISO (PMID:21336257) RGD PMID:21336257 NCBI chr 1:234,749,138...234,931,219
Ensembl chr 1:234,751,733...234,931,560
JBrowse link
G Dhx36 DEAH-box helicase 36 involved_in ISO
ISS
(PMID:26489465)
GO_REF:0000024
RGD
UniProt
PMID:26489465 GO_REF:0000024 NCBI chr 2:149,006,089...149,044,192
Ensembl chr 2:146,856,469...146,894,572
JBrowse link
G Dnd1 DND microRNA-mediated repression inhibitor 1 involved_in ISO (PMID:28297718) RGD PMID:28297718 NCBI chr18:28,378,692...28,381,316
Ensembl chr18:28,378,692...28,381,316
JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D IMP RGD PMID:20805360 RGD:10042974 NCBI chr14:9,918,630...9,938,072
Ensembl chr14:9,615,479...9,633,786
JBrowse link
G Khsrp KH-type splicing regulatory protein involved_in ISO
ISS
(PMID:16126846), (PMID:28275056)
GO_REF:0000024
RGD
UniProt
PMID:16126846 PMID:28275056 GO_REF:0000024 NCBI chr 9:1,949,557...1,959,400
Ensembl chr 9:1,862,899...1,872,451
JBrowse link
G Mov10 Mov10 RNA helicase involved_in ISO (PMID:24726324) RGD PMID:24726324 NCBI chr 2:194,982,014...195,003,513
Ensembl chr 2:192,293,470...192,315,083
JBrowse link
G Plekhn1 pleckstrin homology domain containing N1 involved_in ISO
IBA
(PMID:29180010)
(PMID:27616329)
GO_REF:0000033
RGD
GO_Central
PMID:27616329 PMID:29180010 GO_REF:0000033 NCBI chr 5:172,087,524...172,095,566
Ensembl chr 5:166,804,837...166,813,155
JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO (PMID:24375645) RGD PMID:24375645 NCBI chr17:18,481,893...18,494,440
Ensembl chr17:18,275,688...18,288,102
JBrowse link
G Rc3h1 ring finger and CCCH-type domains 1 involved_in ISO (PMID:26000482) RGD PMID:26000482 NCBI chr13:75,707,098...75,779,114
Ensembl chr13:73,173,946...73,238,839
JBrowse link
G Tardbp TAR DNA binding protein involved_in ISO (PMID:28335005) RGD PMID:28335005 NCBI chr 5:164,330,452...164,348,435
Ensembl chr 5:159,051,799...159,062,055
JBrowse link
G Trim71 tripartite motif containing 71 involved_in ISO (PMID:23125361) RGD PMID:23125361 NCBI chr 8:123,076,499...123,129,016
Ensembl chr 8:114,199,187...114,250,807
JBrowse link
G Upf1 UPF1, RNA helicase and ATPase involved_in ISO (PMID:24726324) RGD PMID:24726324 NCBI chr16:19,110,531...19,131,327
Ensembl chr16:19,076,322...19,096,568
JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in ISS
IBA
ISO
GO_REF:0000024
GO_REF:0000033
(PMID:19322177), (PMID:23185455), (PMID:26000482), (PMID:26134560)
(PMID:19909337)
UniProt
GO_Central
RGD
PMID:19322177 PMID:19909337 PMID:23185455 PMID:26000482 PMID:26134560 GO_REF:0000024 GO_REF:0000033 NCBI chr 5:142,661,193...142,670,051
Ensembl chr 5:137,376,564...137,385,351
JBrowse link
G Zc3h12d zinc finger CCCH type containing 12D involved_in ISO (PMID:26134560) RGD PMID:26134560 NCBI chr 1:2,313,110...2,348,820
Ensembl chr 1:2,314,324...2,348,819
JBrowse link
G Zfp36 zinc finger protein 36 involved_in ISO
IEA
ISS
(PMID:11719186), (PMID:14679154), (PMID:15187101), (PMID:15634918), (PMID:15687258), (PMID:15766526), (PMID:20221403), (PMID:27193233), (PMID:9703499)
(PMID:17288565), (PMID:22701344), (PMID:27193233)
GO_REF:0000104
GO_REF:0000024
RGD
UniProt
PMID:9703499 PMID:11719186 PMID:14679154 PMID:15187101 PMID:15634918 More... GO_REF:0000024 GO_REF:0000104 NCBI chr 1:92,796,628...92,799,108
Ensembl chr 1:83,669,084...83,671,564
JBrowse link
G Zfp36l1 zinc finger protein 36, C3H type-like 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:20622884), (PMID:22701344), (PMID:24700863), (PMID:24733888), (PMID:27102483)
(PMID:12198173), (PMID:15467755), (PMID:15538381), (PMID:15687258), (PMID:18326031), (PMID:19179481), (PMID:24700863), (PMID:25014217), (PMID:25106868), (PMID:26542173)
UniProt
RGD
PMID:12198173 PMID:15467755 PMID:15538381 PMID:15687258 PMID:18326031 More... GO_REF:0000024 NCBI chr 6:104,663,396...104,669,815
Ensembl chr 6:98,930,718...98,935,748
JBrowse link
G Zfp36l2 zinc finger protein 36, C3H type-like 2 involved_in ISO (PMID:25106868)
(PMID:20622884), (PMID:22701344)
RGD PMID:20622884 PMID:22701344 PMID:25106868 NCBI chr 6:16,242,622...16,246,662
Ensembl chr 6:10,490,032...10,494,064
JBrowse link
3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angel2 angel homolog 2 involved_in ISO
IBA
(PMID:22547059)
GO_REF:0000033
RGD
GO_Central
PMID:22547059 GO_REF:0000033 NCBI chr13:102,509,111...102,529,501
Ensembl chr13:102,510,589...102,529,493
JBrowse link
G Boll boule homolog, RNA binding protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:64,225,411...64,354,394
Ensembl chr 9:56,733,584...56,859,916
JBrowse link
G Dazl deleted in azoospermia-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:18,193,363...18,210,100
Ensembl chr 9:10,695,592...10,712,323
JBrowse link
G Elavl1 ELAV like RNA binding protein 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:27616329)
(PMID:14517288), (PMID:19029303), (PMID:26489465), (PMID:29180010)
UniProt
RGD
PMID:14517288 PMID:19029303 PMID:26489465 PMID:27616329 PMID:29180010 GO_REF:0000024 NCBI chr12:7,441,699...7,482,625
Ensembl chr12:2,645,061...2,684,784
JBrowse link
G Elavl4 ELAV like RNA binding protein 4 involved_in ISO
ISS
(PMID:12034726)
GO_REF:0000024
RGD
UniProt
PMID:12034726 GO_REF:0000024 NCBI chr 5:130,285,418...130,429,106
Ensembl chr 5:125,056,848...125,200,446
JBrowse link
G Hnrnpa0 heterogeneous nuclear ribonucleoprotein A0 involved_in ISO
IBA
(PMID:12456657)
GO_REF:0000033
RGD
GO_Central
PMID:12456657 GO_REF:0000033 NCBI chr17:6,513,129...6,515,786
Ensembl chr17:6,507,275...6,509,375
JBrowse link
G Hnrnpc heterogeneous nuclear ribonucleoprotein C involved_in ISO (PMID:16010978) RGD PMID:16010978 NCBI chr15:27,253,098...27,282,779
Ensembl chr15:24,779,450...24,809,183
JBrowse link
G Mapkapk2 MAPK activated protein kinase 2 involved_in ISO (PMID:14517288), (PMID:15014438), (PMID:20932473) RGD PMID:14517288 PMID:15014438 PMID:20932473 NCBI chr13:45,066,027...45,112,326
Ensembl chr13:42,513,762...42,560,457
JBrowse link
G Myd88 MYD88, innate immune signal transduction adaptor involved_in ISO (PMID:15294994) RGD PMID:15294994 NCBI chr 8:127,952,161...127,956,230
Ensembl chr 8:119,074,437...119,079,415
JBrowse link
G Nicol1 NELL2 interacting cell ontogeny regulator 1 involved_in ISO (PMID:38625739) RGD PMID:38625739 NCBI chr14:76,768,145...76,769,661
Ensembl chr14:76,768,146...76,773,575
JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 IDA RGD PMID:11696543 RGD:10045987 NCBI chr 7:10,493,199...10,502,957
Ensembl chr 7:9,842,574...9,852,397
JBrowse link
G Rbm10 RNA binding motif protein 10 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:19508861)
Ensembl
RGD
PMID:19508861 GO_REF:0000107 NCBI chr  X:4,093,914...4,126,060
Ensembl chr  X:1,540,398...1,572,575
JBrowse link
G Rbm38 RNA binding motif protein 38 involved_in ISO (PMID:17050675) RGD PMID:17050675 NCBI chr 3:182,219,898...182,232,723
Ensembl chr 3:161,801,577...161,814,381
JBrowse link
G Rbm47 RNA binding motif protein 47 involved_in ISO (PMID:34160127)
(PMID:29844590)
RGD PMID:29844590 PMID:34160127 NCBI chr14:42,407,226...42,545,304
Ensembl chr14:42,154,142...42,189,431
JBrowse link
G Tardbp TAR DNA binding protein involved_in ISO (PMID:17481916) RGD PMID:17481916 NCBI chr 5:164,330,452...164,348,435
Ensembl chr 5:159,051,799...159,062,055
JBrowse link
G Tirap TIR domain containing adaptor protein involved_in ISO (PMID:15294994) RGD PMID:15294994 NCBI chr 8:41,789,557...41,805,903
Ensembl chr 8:33,531,725...33,547,432
JBrowse link
G Zfp36 zinc finger protein 36 involved_in ISO
ISS
(PMID:15014438)
GO_REF:0000024
RGD
UniProt
PMID:15014438 GO_REF:0000024 NCBI chr 1:92,796,628...92,799,108
Ensembl chr 1:83,669,084...83,671,564
JBrowse link
CRD-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csde1 cold shock domain containing E1 involved_in ISO
IEA
(PMID:11051545)
GO_REF:0000107
RGD
Ensembl
PMID:11051545 GO_REF:0000107 NCBI chr 2:193,234,546...193,271,301
Ensembl chr 2:190,554,980...190,582,784
JBrowse link
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:19029303) RGD PMID:19029303 NCBI chr13:68,152,813...68,189,580
Ensembl chr13:65,602,323...65,639,069
JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D involved_in ISO (PMID:11051545) RGD PMID:11051545 NCBI chr14:9,918,630...9,938,072
Ensembl chr14:9,615,479...9,633,786
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in IEA
ISO
GO_REF:0000107
(PMID:19029303)
Ensembl
RGD
PMID:19029303 GO_REF:0000107 NCBI chr13:92,609,791...92,618,580
Ensembl chr13:90,074,181...90,086,588
JBrowse link
G Igf2bp1 insulin-like growth factor 2 mRNA binding protein 1 involved_in ISS
IBA
ISO
GO_REF:0000024
GO_REF:0000033
(PMID:19029303), (PMID:29476152)
UniProt
GO_Central
RGD
PMID:19029303 PMID:29476152 GO_REF:0000024 GO_REF:0000033 NCBI chr10:81,405,021...81,447,814
Ensembl chr10:80,908,076...80,951,129
JBrowse link
G Igf2bp2 insulin-like growth factor 2 mRNA binding protein 2 involved_in ISO
IBA
(PMID:29476152)
GO_REF:0000033
RGD
GO_Central
PMID:29476152 GO_REF:0000033 NCBI chr11:92,378,908...92,478,893
Ensembl chr11:78,874,414...78,974,377
JBrowse link
G Igf2bp3 insulin-like growth factor 2 mRNA binding protein 3 involved_in ISO
IBA
(PMID:29476152)
GO_REF:0000033
RGD
GO_Central
PMID:29476152 GO_REF:0000033 NCBI chr 4:78,060,494...78,195,007
Ensembl chr 4:78,060,494...78,194,865
JBrowse link
G Pabpc1 poly(A) binding protein, cytoplasmic 1 involved_in ISO (PMID:11051545) RGD PMID:11051545 NCBI chr 7:69,662,513...69,674,806
Ensembl chr 7:67,777,381...67,789,744
JBrowse link
G Paip1 poly(A) binding protein interacting protein 1 involved_in ISO (PMID:11051545) RGD PMID:11051545 NCBI chr 2:53,255,916...53,282,965
Ensembl chr 2:51,522,921...51,550,241
JBrowse link
G Syncrip synaptotagmin binding, cytoplasmic RNA interacting protein involved_in ISO
IBA
IEA
(PMID:11051545), (PMID:19029303)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:11051545 PMID:19029303 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:98,282,358...98,315,412
Ensembl chr 8:89,402,866...89,435,515
JBrowse link
G Ybx1 Y box binding protein 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:19029303)
UniProt
RGD
PMID:19029303 GO_REF:0000024 NCBI chr 5:138,167,444...138,188,155
Ensembl chr 5:132,882,145...132,898,862
JBrowse link
deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnot7 CCR4-NOT transcription complex, subunit 7 involved_in
acts_upstream_of_or_within
ISO (PMID:31439799)
MGI:109382 (PMID:18625844)
RGD PMID:18625844 PMID:31439799 NCBI chr16:58,478,882...58,498,046
Ensembl chr16:51,775,412...51,794,576
JBrowse link
G Dcp1a decapping mRNA 1A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:5,656,960...5,702,151
Ensembl chr16:5,656,773...5,702,140
JBrowse link
G Dcp1b decapping mRNA 1B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:154,030,181...154,068,038
Ensembl chr 4:152,358,241...152,397,145
JBrowse link
G Dcp2 decapping mRNA 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:36,750,732...36,787,067
Ensembl chr18:36,750,732...36,788,557
JBrowse link
G Dcps decapping enzyme, scavenger involved_in IEA
IBA
GO_REF:0000002
GO_REF:0000033
GO_REF:0000104
InterPro
GO_Central
UniProt
GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 NCBI chr 8:41,729,507...41,782,222
Ensembl chr 8:33,415,671...33,524,389
JBrowse link
G Lsm1 LSM1 homolog, mRNA degradation associated involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:66,277,345...66,288,852
Ensembl chr16:66,277,345...66,288,852
JBrowse link
G Noct nocturnin acts_upstream_of_or_within ISO MGI:1298230 (PMID:18625844) RGD PMID:18625844 NCBI chr 2:137,422,074...137,442,282
Ensembl chr 2:135,271,189...135,291,400
JBrowse link
G Pan3 poly(A) specific ribonuclease subunit PAN3 acts_upstream_of_or_within ISO (PMID:18625844) RGD PMID:18625844 NCBI chr12:7,476,707...7,595,384
Ensembl chr12:7,476,697...7,599,204
JBrowse link
G Patl1 PAT1 homolog 1, processing body mRNA decay factor involved_in ISO
IBA
IEA
ISS
(PMID:20584987), (PMID:20852261)
GO_REF:0000033
GO_REF:0000002
GO_REF:0000024
RGD
GO_Central
InterPro
UniProt
PMID:20584987 PMID:20852261 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 NCBI chr 1:208,831,115...208,862,904
Ensembl chr 1:208,831,115...208,862,857
JBrowse link
G Patl2 PAT1 homolog 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:109,072,958...109,087,425
Ensembl chr 3:109,075,290...109,083,253
JBrowse link
G St3gal4 ST3 beta-galactoside alpha-2,3-sialyltransferase 4 involved_in IEA GO_REF:0000002
GO_REF:0000104
InterPro
UniProt
GO_REF:0000002 GO_REF:0000104 NCBI chr 8:41,673,510...41,723,158
Ensembl chr 8:33,415,671...33,524,389
JBrowse link
miRNA-mediated gene silencing by mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago1 argonaute RISC component 1 NOT|involved_in ISO (PMID:15260970) RGD PMID:15260970 NCBI chr 5:144,006,618...144,064,740
Ensembl chr 5:138,722,111...138,773,546
JBrowse link
G Ago2 argonaute RISC catalytic component 2 involved_in ISO
ISS
IEA
(PMID:15260970), (PMID:17524464), (PMID:18771919)
(PMID:16357216)
GO_REF:0000024
GO_REF:0000104
RGD
UniProt
PMID:15260970 PMID:16357216 PMID:17524464 PMID:18771919 GO_REF:0000024 GO_REF:0000104 NCBI chr 7:106,907,209...106,994,124
Ensembl chr 7:105,029,120...105,104,974
JBrowse link
G Ago3 argonaute RISC catalytic component 3 NOT|involved_in ISO (PMID:15260970) RGD PMID:15260970 NCBI chr 5:143,913,957...143,998,746
Ensembl chr 5:138,639,569...138,714,230
JBrowse link
G Ago4 argonaute RISC component 4 NOT|involved_in ISO (PMID:15260970) RGD PMID:15260970 NCBI chr 5:144,064,949...144,110,422
Ensembl chr 5:138,783,069...138,825,632
JBrowse link
G Cnot6 CCR4-NOT transcription complex, subunit 6 involved_in ISO
IEA
ISS
(PMID:20065043)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:20065043 GO_REF:0000024 GO_REF:0000107 NCBI chr10:33,978,785...34,031,025
Ensembl chr10:33,980,831...34,031,025
JBrowse link
G Cnot7 CCR4-NOT transcription complex, subunit 7 involved_in ISO (PMID:20065043) RGD PMID:20065043 NCBI chr16:58,478,882...58,498,046
Ensembl chr16:51,775,412...51,794,576
JBrowse link
G Cnot8 CCR4-NOT transcription complex, subunit 8 involved_in ISO (PMID:20065043) RGD PMID:20065043 NCBI chr10:42,281,614...42,294,740
Ensembl chr10:42,281,722...42,294,730
JBrowse link
G Mir1 microRNA 1 involved_in ISO (PMID:23499676), (PMID:25802280) RGD PMID:23499676 PMID:25802280 NCBI chr18:2,160,327...2,160,413 JBrowse link
G Mir100 microRNA 100 involved_in ISO (PMID:22684006) RGD PMID:22684006 NCBI chr 8:41,901,225...41,901,304
Ensembl chr 8:41,901,225...41,901,304
JBrowse link
G Mir106a microRNA 106a involved_in ISO (PMID:22912877), (PMID:26265888), (PMID:27325313) RGD PMID:22912877 PMID:26265888 PMID:27325313 NCBI chr  X:137,343,570...137,343,647
Ensembl chr  X:132,422,584...132,422,661
JBrowse link
G Mir106b microRNA 106b involved_in ISO (PMID:27325313) RGD PMID:27325313 NCBI chr12:22,157,053...22,157,134
Ensembl chr12:17,043,344...17,043,425
JBrowse link
G Mir125a microRNA 125a involved_in ISO (PMID:30670152) RGD PMID:30670152 NCBI chr 1:67,350,675...67,350,759
Ensembl chr 1:58,677,626...58,677,710
JBrowse link
G Mir125b1 microRNA 125b-1 involved_in ISO (PMID:28214897) RGD PMID:28214897 NCBI chr 8:50,850,036...50,850,122
Ensembl chr 8:41,952,966...41,953,052
JBrowse link
G Mir125b2 microRNA 125b-2 involved_in ISO (PMID:28214897) RGD PMID:28214897 NCBI chr11:29,732,572...29,732,659 JBrowse link
G Mir128-1 microRNA 128-1 involved_in ISO (PMID:33058756) RGD PMID:33058756 NCBI chr13:42,251,884...42,251,965
Ensembl chr13:39,699,449...39,699,530
JBrowse link
G Mir128-2 microRNA 128-2 involved_in ISO (PMID:33058756) RGD PMID:33058756 NCBI chr 8:120,963,795...120,963,878
Ensembl chr 8:112,085,467...112,085,550
JBrowse link
G Mir130a microRNA 130a involved_in ISO (PMID:30741461) RGD PMID:30741461 NCBI chr 3:90,229,228...90,229,315
Ensembl chr 3:69,822,542...69,822,629
JBrowse link
G Mir130b microRNA 130b involved_in ISO (PMID:24040078) RGD PMID:24040078 NCBI chr11:83,880,163...83,880,244
Ensembl chr11:83,880,163...83,880,244
JBrowse link
G Mir133a1 microRNA 133a-1 involved_in ISO (PMID:32205184) RGD PMID:32205184 NCBI chr18:2,157,872...2,157,958 JBrowse link
G Mir135b microRNA 135b involved_in ISO (PMID:27793001) RGD PMID:27793001 NCBI chr13:43,638,857...43,638,953
Ensembl chr13:43,638,857...43,638,953
JBrowse link
G Mir137 microRNA 137 involved_in ISO (PMID:23275153) RGD PMID:23275153 NCBI chr 2:206,480,881...206,480,982
Ensembl chr 2:206,480,884...206,480,985
JBrowse link
G Mir140 microRNA 140 involved_in ISO (PMID:24928442) RGD PMID:24928442 NCBI chr19:52,375,293...52,375,391
Ensembl chr19:35,465,577...35,465,675
JBrowse link
G Mir142 microRNA 142 involved_in ISO (PMID:24558198), (PMID:26572508), (PMID:31168355) RGD PMID:24558198 PMID:26572508 PMID:31168355 NCBI chr10:73,055,104...73,055,190
Ensembl chr10:72,557,857...72,557,967
JBrowse link
G Mir145 microRNA 145 involved_in ISO (PMID:25323858), (PMID:25704091), (PMID:29883722) RGD PMID:25323858 PMID:25704091 PMID:29883722 NCBI chr18:57,369,983...57,370,070
Ensembl chr18:55,099,640...55,099,727
JBrowse link
G Mir146a microRNA 146a involved_in ISO (PMID:30779466) RGD PMID:30779466 NCBI chr10:28,349,996...28,350,090
Ensembl chr10:27,848,516...27,848,610
JBrowse link
G Mir151 microRNA 151 involved_in ISO (PMID:20305651) RGD PMID:20305651 NCBI chr 7:105,172,377...105,172,473 JBrowse link
G Mir181a2 microRNA 181a-2 involved_in ISO (PMID:22714950), (PMID:25535255) RGD PMID:22714950 PMID:25535255 NCBI chr 3:43,025,563...43,025,679
Ensembl chr 3:22,615,845...22,615,961
JBrowse link
G Mir181b1 microRNA 181b-1 involved_in ISO (PMID:25535255) RGD PMID:25535255 NCBI chr13:52,037,228...52,037,337
Ensembl chr13:49,485,688...49,485,797
JBrowse link
G Mir181b2 microRNA 181b-2 involved_in ISO (PMID:25535255) RGD PMID:25535255 NCBI chr 3:43,026,666...43,026,753
Ensembl chr 3:22,616,948...22,617,035
JBrowse link
G Mir181c microRNA 181c involved_in ISO (PMID:25535255) RGD PMID:25535255 NCBI chr19:40,888,291...40,888,396
Ensembl chr19:23,983,523...23,983,628
JBrowse link
G Mir181d microRNA 181d involved_in ISO (PMID:25535255) RGD PMID:25535255 NCBI chr19:23,983,706...23,983,788
Ensembl chr19:23,983,706...23,983,788
JBrowse link
G Mir185 microRNA 185 involved_in ISO (PMID:23459944), (PMID:23951060), (PMID:26316588), (PMID:29053187) RGD PMID:23459944 PMID:23951060 PMID:26316588 PMID:29053187 NCBI chr11:82,664,716...82,664,795
Ensembl chr11:82,664,716...82,664,795
JBrowse link
G Mir18a microRNA 18a involved_in ISO (PMID:28131417), (PMID:29988076), (PMID:34937502) RGD PMID:28131417 PMID:29988076 PMID:34937502 NCBI chr15:98,587,984...98,588,079
Ensembl chr15:92,180,765...92,180,860
JBrowse link
G Mir190b microRNA 190b involved_in ISO (PMID:32039833) RGD PMID:32039833 NCBI chr 2:175,514,800...175,514,877
Ensembl chr 2:175,514,800...175,514,877
JBrowse link
G Mir191 microRNA 191 involved_in ISO (PMID:31874245) RGD PMID:31874245 NCBI chr 8:118,142,627...118,142,717 JBrowse link
G Mir192 microRNA 192 involved_in ISO (PMID:28483554) RGD PMID:28483554 NCBI chr 1:212,994,209...212,994,318
Ensembl chr 1:203,564,946...203,565,055
JBrowse link
G Mir193a microRNA 193a involved_in ISO (PMID:29725386) RGD PMID:29725386 NCBI chr10:65,170,306...65,170,417
Ensembl chr10:64,672,343...64,672,454
JBrowse link
G Mir195 microRNA 195 involved_in ISO (PMID:31921616) RGD PMID:31921616 NCBI chr10:55,450,495...55,450,581
Ensembl chr10:54,951,838...54,951,924
JBrowse link
G Mir196a1 microRNA 196a-1 acts_upstream_of_or_within ISO (PMID:15105502), (PMID:15361871) RGD PMID:15105502 PMID:15361871 NCBI chr10:81,231,006...81,231,085
Ensembl chr10:81,231,006...81,231,085
JBrowse link
G Mir196a2 microRNA 196a-2 acts_upstream_of_or_within ISO (PMID:15105502), (PMID:15361871) RGD PMID:15105502 PMID:15361871 NCBI chr 7:135,988,876...135,988,985
Ensembl chr 7:134,110,400...134,110,509
JBrowse link
G Mir196b microRNA 196b acts_upstream_of_or_within ISO (PMID:15105502) RGD PMID:15105502 NCBI chr 4:82,661,101...82,661,185
Ensembl chr 4:81,330,487...81,330,571
JBrowse link
G Mir19a microRNA 19a involved_in ISO (PMID:27098600), (PMID:29130787) RGD PMID:27098600 PMID:29130787 NCBI chr15:98,588,131...98,588,212
Ensembl chr15:92,180,912...92,180,993
JBrowse link
G Mir19b1 microRNA 19b-1 involved_in ISO (PMID:27098600) RGD PMID:27098600 NCBI chr15:98,588,433...98,588,519
Ensembl chr15:92,181,214...92,181,300
JBrowse link
G Mir19b2 microRNA 19b-2 involved_in ISO (PMID:27098600) RGD PMID:27098600 NCBI chr  X:137,343,058...137,343,153
Ensembl chr  X:132,422,072...132,422,167
JBrowse link
G Mir1a-1 microRNA 1a-1 involved_in ISO (PMID:23499676), (PMID:25802280) RGD PMID:23499676 PMID:25802280 NCBI chr 3:187,864,685...187,864,769
Ensembl chr 3:167,487,117...167,487,201
JBrowse link
G Mir200b microRNA 200b involved_in ISO (PMID:22522429) RGD PMID:22522429 NCBI chr 5:171,931,495...171,931,589
Ensembl chr 5:166,649,272...166,649,366
JBrowse link
G Mir200c microRNA 200c involved_in ISO (PMID:22522429) RGD PMID:22522429 NCBI chr 4:159,209,965...159,210,033 JBrowse link
G Mir204 microRNA 204 involved_in ISO (PMID:20056717) RGD PMID:20056717 NCBI chr 1:229,743,461...229,743,570
Ensembl chr 1:220,316,931...220,317,040
JBrowse link
G Mir206 microRNA 206 involved_in ISO (PMID:23499676) RGD PMID:23499676 NCBI chr 9:30,590,697...30,590,780
Ensembl chr 9:23,094,249...23,094,332
JBrowse link
G Mir20a microRNA 20a involved_in ISO (PMID:29653364), (PMID:31368162) RGD PMID:29653364 PMID:31368162 NCBI chr15:98,588,303...98,588,387
Ensembl chr15:92,181,084...92,181,168
JBrowse link
G Mir20b microRNA 20b involved_in ISO (PMID:32336590) RGD PMID:32336590 NCBI chr  X:137,343,197...137,343,268
Ensembl chr  X:132,422,211...132,422,282
JBrowse link
G Mir210 microRNA 210 involved_in ISO (PMID:29944867) RGD PMID:29944867 NCBI chr 1:205,755,923...205,756,032
Ensembl chr 1:196,326,337...196,326,454
JBrowse link
G Mir211 microRNA 211 involved_in ISO (PMID:21109473) RGD PMID:21109473 NCBI chr 1:117,777,539...117,777,644
Ensembl chr 1:117,777,539...117,777,644
JBrowse link
G Mir212 microRNA 212 involved_in ISO (PMID:26693054) RGD PMID:26693054 NCBI chr10:60,521,740...60,521,850
Ensembl chr10:60,023,403...60,023,513
JBrowse link
G Mir214 microRNA 214 involved_in ISO (PMID:30703347) RGD PMID:30703347 NCBI chr13:77,121,645...77,121,752
Ensembl chr13:74,588,372...74,588,481
JBrowse link
G Mir223 microRNA 223 involved_in ISO (PMID:23459944), (PMID:30807577), (PMID:34637033) RGD PMID:23459944 PMID:30807577 PMID:34637033 NCBI chr  X:65,151,383...65,151,492
Ensembl chr  X:61,141,887...61,141,996
JBrowse link
G Mir23a microRNA 23a involved_in ISO (PMID:26400397) RGD PMID:26400397 NCBI chr19:40,859,769...40,859,843
Ensembl chr19:23,954,997...23,955,071
JBrowse link
G Mir24-2 microRNA 24-2 involved_in ISO (PMID:30378100) RGD PMID:30378100 NCBI chr19:40,859,455...40,859,562
Ensembl chr19:23,954,683...23,954,790
JBrowse link
G Mir26b microRNA 26b involved_in ISO (PMID:25536365) RGD PMID:25536365 NCBI chr 9:83,425,709...83,425,793
Ensembl chr 9:75,976,596...75,976,680
JBrowse link
G Mir27a microRNA 27a involved_in ISO (PMID:25915942), (PMID:26400397) RGD PMID:25915942 PMID:26400397 NCBI chr19:40,859,603...40,859,689
Ensembl chr19:23,954,831...23,954,917
JBrowse link
G Mir27b microRNA 27b involved_in ISO (PMID:30729664) RGD PMID:30729664 NCBI chr17:1,819,147...1,819,243
Ensembl chr17:1,813,426...1,813,529
JBrowse link
G Mir29b1 microRNA 29b-1 involved_in ISO (PMID:26175849) RGD PMID:26175849 NCBI chr 4:60,618,334...60,618,414
Ensembl chr 4:59,650,986...59,651,067
JBrowse link
G Mir29b2 microRNA 29b-2 involved_in ISO (PMID:26175849) RGD PMID:26175849 NCBI chr13:109,098,831...109,098,911
Ensembl chr13:106,570,367...106,570,456
JBrowse link
G Mir30b microRNA 30b involved_in ISO (PMID:23968872) RGD PMID:23968872 NCBI chr 7:102,021,543...102,021,629
Ensembl chr 7:100,132,589...100,132,675
JBrowse link
G Mir320a microRNA 320a involved_in ISO (PMID:32271402) RGD PMID:32271402 NCBI chr15:51,926,088...51,926,169
Ensembl chr15:45,516,392...45,516,473
JBrowse link
G Mir322 microRNA 322 involved_in ISO (PMID:29130787) RGD PMID:29130787 NCBI chr  X:137,726,147...137,726,241
Ensembl chr  X:132,806,594...132,806,688
JBrowse link
G Mir326 microRNA 326 involved_in ISO (PMID:24279830) RGD PMID:24279830 NCBI chr 1:153,854,029...153,854,123
Ensembl chr 1:153,854,029...153,854,123
JBrowse link
G Mir337 microRNA 337 involved_in ISO (PMID:22723956) RGD PMID:22723956 NCBI chr 6:134,321,142...134,321,238
Ensembl chr 6:128,538,902...128,538,998
JBrowse link
G Mir340 microRNA 340 involved_in ISO (PMID:28413603) RGD PMID:28413603 NCBI chr10:34,393,568...34,393,665
Ensembl chr10:34,393,568...34,393,665
JBrowse link
G Mir342 microRNA 342 involved_in ISO (PMID:23951060) RGD PMID:23951060 NCBI chr 6:133,329,655...133,329,753
Ensembl chr 6:127,565,269...127,565,367
JBrowse link
G Mir34b microRNA 34b involved_in ISO (PMID:22336710) RGD PMID:22336710 NCBI chr 8:60,306,609...60,306,692
Ensembl chr 8:51,410,244...51,410,327
JBrowse link
G Mir3582 microRNA 3582 involved_in ISO (PMID:32205184) RGD PMID:32205184 NCBI chr18:2,157,853...2,157,970
Ensembl chr18:1,885,063...1,885,180
JBrowse link
G Mir365b microRNA 365b involved_in ISO (PMID:30910589) RGD PMID:30910589 NCBI chr10:64,686,255...64,686,340
Ensembl chr10:64,686,252...64,686,351
JBrowse link
G Mir423 microRNA 423 involved_in ISO (PMID:32264887) RGD PMID:32264887 NCBI chr10:61,914,142...61,914,220
Ensembl chr10:61,914,133...61,914,226
JBrowse link
G Mir486 microRNA 486 involved_in ISO (PMID:25857263) RGD PMID:25857263
G Mir497 microRNA 497 involved_in ISO (PMID:29969696) RGD PMID:29969696 NCBI chr10:55,450,171...55,450,239
Ensembl chr10:54,951,505...54,951,584
JBrowse link
G Mir544 microRNA 544 involved_in ISO (PMID:27186677) RGD PMID:27186677 NCBI chr 6:128,743,530...128,743,607
Ensembl chr 6:128,743,530...128,743,607
JBrowse link
G Mir665 microRNA 665 involved_in ISO (PMID:34454184) RGD PMID:34454184 NCBI chr 6:128,539,440...128,539,533
Ensembl chr 6:128,539,440...128,539,533
JBrowse link
G Mir708 microRNA 708 involved_in ISO (PMID:26932538) RGD PMID:26932538 NCBI chr 1:160,011,158...160,011,245
Ensembl chr 1:150,599,876...150,599,963
JBrowse link
G Mir9-3 microRNA 9-3 involved_in ISO (PMID:26315535), (PMID:29584810) RGD PMID:26315535 PMID:29584810 NCBI chr 1:142,849,400...142,849,489 JBrowse link
G Mir93 microRNA 93 involved_in ISO (PMID:24606633), (PMID:28797104) RGD PMID:24606633 PMID:28797104 NCBI chr12:22,156,844...22,156,930
Ensembl chr12:17,043,135...17,043,221
JBrowse link
G Mir96 microRNA 96 involved_in ISO (PMID:23459944) RGD PMID:23459944 NCBI chr 4:58,788,411...58,788,516
Ensembl chr 4:58,788,411...58,788,516
JBrowse link
G Mir98 microRNA 98 involved_in ISO (PMID:27860183), (PMID:28251559), (PMID:30195495) RGD PMID:27860183 PMID:28251559 PMID:30195495 NCBI chr  X:24,460,648...24,460,755
Ensembl chr  X:20,981,235...20,981,342
JBrowse link
G Mirlet7a1 microRNA let-7a-1 involved_in ISO (PMID:17671087), (PMID:30467960) RGD PMID:17671087 PMID:30467960 NCBI chr17:16,320,133...16,320,226
Ensembl chr17:16,113,768...16,113,867
JBrowse link
G Mirlet7b microRNA let-7b involved_in ISO (PMID:29471394) RGD PMID:29471394 NCBI chr 7:118,684,038...118,684,122
Ensembl chr 7:116,804,186...116,804,270
JBrowse link
G Mirlet7c1 microRNA let-7c-1 involved_in ISO (PMID:19841744) RGD PMID:19841744 NCBI chr11:16,201,163...16,201,256
Ensembl chr11:16,201,158...16,201,265
JBrowse link
G Mirlet7c2 microRNA let7c-2 involved_in ISO (PMID:17671087), (PMID:30467960) RGD PMID:17671087 PMID:30467960 NCBI chr 7:118,683,623...118,683,717
Ensembl chr 7:116,803,771...116,803,865
JBrowse link
G Mov10 Mov10 RNA helicase involved_in ISO (PMID:16289642) RGD PMID:16289642 NCBI chr 2:194,982,014...195,003,513
Ensembl chr 2:192,293,470...192,315,083
JBrowse link
mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alkbh5 alkB homolog 5, RNA demethylase involved_in ISS
ISO
GO_REF:0000024
(PMID:36859428)
(PMID:34048572), (PMID:37257451)
UniProt
RGD
PMID:34048572 PMID:36859428 PMID:37257451 GO_REF:0000024 NCBI chr10:45,844,411...45,865,853
Ensembl chr10:45,343,395...45,366,331
JBrowse link
G Celf1 CUGBP, Elav-like family member 1 involved_in IDA PMID:30508596 ARUK-UCL PMID:30508596 RGD:38501076 NCBI chr 3:76,924,591...76,999,429
Ensembl chr 3:76,924,613...76,999,426
JBrowse link
G Cnot6l CCR4-NOT transcription complex, subunit 6-like acts_upstream_of_or_within ISO (PMID:17452450) RGD PMID:17452450 NCBI chr14:13,410,499...13,502,511
Ensembl chr14:13,411,281...13,498,203
JBrowse link
G Elavl1 ELAV like RNA binding protein 1 IMP RGD PMID:26682942 RGD:329961560 NCBI chr12:7,441,699...7,482,625
Ensembl chr12:2,645,061...2,684,784
JBrowse link
G Fto FTO, alpha-ketoglutarate dependent dioxygenase involved_in ISO
IEA
ISS
(PMID:28002401), (PMID:30197295)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:28002401 PMID:30197295 GO_REF:0000024 GO_REF:0000107 NCBI chr19:31,456,749...31,865,011
Ensembl chr19:15,349,696...15,692,083
JBrowse link
G Fxr1 FMR1 autosomal homolog 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:30067974)
UniProt
Ensembl
RGD
PMID:30067974 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:118,812,287...118,865,813
Ensembl chr 2:116,884,248...116,937,590
JBrowse link
G Fxr2 FMR1 autosomal homolog 2 involved_in ISO (PMID:21658585) RGD PMID:21658585 NCBI chr10:54,849,345...54,869,713
Ensembl chr10:54,350,131...54,370,964
JBrowse link
G Gigyf2 GRB10 interacting GYF protein 2 involved_in ISO (PMID:27157137) RGD PMID:27157137 NCBI chr 9:95,449,143...95,574,927
Ensembl chr 9:88,001,301...88,125,715
JBrowse link
G Hnrnpr heterogeneous nuclear ribonucleoprotein R IMP RGD PMID:15798208 RGD:9854643 NCBI chr 5:153,826,482...153,872,272
Ensembl chr 5:148,543,044...148,574,867
JBrowse link
G Mettl14 methyltransferase 14, N6-adenosine-methyltransferase non-catalytic subunit involved_in ISO (PMID:24394384), (PMID:28965759) RGD PMID:24394384 PMID:28965759 NCBI chr 2:214,215,165...214,231,412
Ensembl chr 2:211,530,602...211,546,821
JBrowse link
G Mettl16 methyltransferase 16, RNA N6-adenosine involved_in ISO (PMID:29262316) RGD PMID:29262316 NCBI chr10:60,139,317...60,185,438
Ensembl chr10:59,640,972...59,687,061
JBrowse link
G Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (PMID:24394384), (PMID:25456834), (PMID:25569111), (PMID:28637692), (PMID:28792938), (PMID:28965759) RGD PMID:24394384 PMID:25456834 PMID:25569111 PMID:28637692 PMID:28792938 More... NCBI chr15:27,476,659...27,491,134
Ensembl chr15:25,003,172...25,014,041
JBrowse link
G Mir144 microRNA 144 involved_in ISO MGI:3619412|MGI:5562734 (PMID:30971389) RGD PMID:30971389 NCBI chr10:63,459,397...63,459,479
Ensembl chr10:62,961,348...62,961,430
JBrowse link
G Mir451a microRNA 451a involved_in ISO MGI:2676829|MGI:5562734 (PMID:30971389) RGD PMID:30971389 NCBI chr10:63,459,569...63,459,640
Ensembl chr10:62,961,520...62,961,591
JBrowse link
G Nanos1 nanos C2HC-type zinc finger 1 involved_in ISO (PMID:24736845) RGD PMID:24736845 NCBI chr 1:269,883,713...269,887,611
Ensembl chr 1:259,897,939...259,898,730
JBrowse link
G Nanos2 nanos C2HC-type zinc finger 2 involved_in ISO (PMID:24736845) RGD PMID:24736845 NCBI chr 1:87,763,716...87,765,176
Ensembl chr 1:78,635,668...78,637,128
JBrowse link
G Nanos3 nanos C2HC-type zinc finger 3 involved_in ISO (PMID:24736845) RGD PMID:24736845 NCBI chr19:23,978,465...23,988,933
Ensembl chr19:23,985,504...23,988,932
JBrowse link
G Pum1 pumilio RNA-binding family member 1 involved_in ISO (PMID:25768905) RGD PMID:25768905 NCBI chr 5:148,120,712...148,238,468
Ensembl chr 5:142,837,127...142,954,039
JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO (PMID:29104163) RGD PMID:29104163 NCBI chr17:18,481,893...18,494,440
Ensembl chr17:18,275,688...18,288,102
JBrowse link
G Rida reactive intermediate imine deaminase A homolog involved_in ISO
IEA
ISS
(PMID:30930054)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:30930054 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:65,691,429...65,705,257
Ensembl chr 7:65,691,435...65,705,716
JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:29353861)
Ensembl
RGD
PMID:29353861 GO_REF:0000107 NCBI chr18:1,387,360...1,509,218
Ensembl chr18:1,115,905...1,235,571
JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 involved_in ISO (PMID:29353861) RGD PMID:29353861 NCBI chr 6:45,407,823...45,502,773
Ensembl chr 6:39,679,082...39,774,031
JBrowse link
G Ythdf1 YTH N6-methyladenosine RNA binding protein F1 involved_in ISO
IBA
(PMID:32492408)
(PMID:32943573)
GO_REF:0000033
RGD
GO_Central
PMID:32492408 PMID:32943573 GO_REF:0000033 NCBI chr 3:188,402,228...188,417,740
Ensembl chr 3:168,024,663...168,040,172
JBrowse link
G Ythdf2 YTH N6-methyladenosine RNA binding protein F2 involved_in ISO
IBA
(PMID:27558897), (PMID:28106072), (PMID:30559377), (PMID:30930054), (PMID:32169943), (PMID:32492408)
(PMID:29855337), (PMID:30065315), (PMID:30150673), (PMID:31959747), (PMID:32943573)
GO_REF:0000033
RGD
GO_Central
PMID:27558897 PMID:28106072 PMID:29855337 PMID:30065315 PMID:30150673 More... GO_REF:0000033 NCBI chr 5:149,665,467...149,693,127
Ensembl chr 5:144,381,431...144,408,144
JBrowse link
G Ythdf3 YTH N6-methyladenosine RNA binding protein F3 involved_in ISO
IBA
(PMID:28106072), (PMID:32492408)
(PMID:32943573)
GO_REF:0000033
RGD
GO_Central
PMID:28106072 PMID:32492408 PMID:32943573 GO_REF:0000033 NCBI chr 2:100,266,942...100,300,896
Ensembl chr 2:98,350,588...98,384,606
JBrowse link
mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 acts_upstream_of_or_within ISO (PMID:15480992) RGD PMID:15480992 NCBI chr 4:157,472,879...157,500,496
Ensembl chr 4:155,800,887...155,827,390
JBrowse link
G Axin2 axin 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:17072303)
Ensembl
RGD
PMID:17072303 GO_REF:0000107 NCBI chr10:93,893,830...93,927,042
Ensembl chr10:93,899,245...93,926,231
JBrowse link
G Cirbp cold inducible RNA binding protein involved_in ISS
ISO
GO_REF:0000024
(PMID:11574538)
UniProt
RGD
PMID:11574538 GO_REF:0000024 NCBI chr 7:10,184,515...10,189,623
Ensembl chr 7:9,424,178...9,538,818
JBrowse link
G Dicer1 dicer 1 ribonuclease III acts_upstream_of_or_within ISO MGI:3589208 (PMID:22844247) RGD PMID:22844247 NCBI chr 6:129,392,298...129,457,252
Ensembl chr 6:123,631,250...123,693,965
JBrowse link
G Dnd1 DND microRNA-mediated repression inhibitor 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:28,378,692...28,381,316
Ensembl chr18:28,378,692...28,381,316
JBrowse link
G E2f1 E2F transcription factor 1 involved_in ISO
IEA
(PMID:15766563)
GO_REF:0000107
RGD
Ensembl
PMID:15766563 GO_REF:0000107 NCBI chr 3:163,524,739...163,535,563
Ensembl chr 3:143,049,478...143,075,361
JBrowse link
G Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 involved_in ISO (PMID:24335285), (PMID:32354837) RGD PMID:24335285 PMID:32354837 NCBI chr14:78,056,115...78,099,846
Ensembl chr14:78,056,297...78,098,793
JBrowse link
G Elavl1 ELAV like RNA binding protein 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(PMID:24394384), (PMID:27609837)
(PMID:14976220), (PMID:21613615)
(PMID:21613615)
(PMID:19029303), (PMID:31358969)
UniProt
RGD
PMID:14976220 PMID:19029303 PMID:21613615 PMID:24394384 PMID:27609837 More... GO_REF:0000024 NCBI chr12:7,441,699...7,482,625
Ensembl chr12:2,645,061...2,684,784
JBrowse link
G Fam76b family with sequence similarity 76, member B involved_in ISO (PMID:38421448) RGD PMID:38421448 NCBI chr 8:18,971,357...18,993,442
Ensembl chr 8:10,688,963...10,711,861
JBrowse link
G Fus Fus RNA binding protein acts_upstream_of_or_within ISO (PMID:27378374) RGD PMID:27378374 NCBI chr 1:192,007,011...192,020,887
Ensembl chr 1:182,576,545...182,590,414
JBrowse link
G Gdnf glial cell derived neurotrophic factor involved_in ISO
IEA
ISS
(PMID:12358785)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:12358785 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:58,621,327...58,647,242
Ensembl chr 2:56,895,010...56,917,209
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in ISO (PMID:17174306) RGD PMID:17174306 NCBI chr13:92,609,791...92,618,580
Ensembl chr13:90,074,181...90,086,588
JBrowse link
G Ikbke inhibitor of nuclear factor kappa B kinase subunit epsilon involved_in ISO MGI:3707541 (PMID:21822257) RGD PMID:21822257 NCBI chr13:45,264,404...45,290,737
Ensembl chr13:42,712,159...42,737,143
JBrowse link
G Larp1 La ribonucleoprotein 1, translational regulator involved_in ISO (PMID:25940091), (PMID:28673543) RGD PMID:25940091 PMID:28673543 NCBI chr10:42,691,833...42,746,816
Ensembl chr10:42,191,325...42,243,371
JBrowse link
G Larp1bl La ribonucleoprotein 1B like involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:123,969,408...124,031,645
Ensembl chr 2:124,008,367...124,030,654
JBrowse link
G Mapkapk2 MAPK activated protein kinase 2 acts_upstream_of_or_within ISO MGI:2179724 (PMID:11741878) RGD PMID:11741878 NCBI chr13:45,066,027...45,112,326
Ensembl chr13:42,513,762...42,560,457
JBrowse link
G Meioc meiosis specific with coiled-coil domain involved_in IBA
ISO
GO_REF:0000033
(PMID:26742488)
GO_Central
RGD
PMID:26742488 GO_REF:0000033 NCBI chr10:87,628,807...87,646,485
Ensembl chr10:87,628,875...87,646,752
JBrowse link
G Mettl14 methyltransferase 14, N6-adenosine-methyltransferase non-catalytic subunit involved_in ISO (PMID:29290617) RGD PMID:29290617 NCBI chr 2:214,215,165...214,231,412
Ensembl chr 2:211,530,602...211,546,821
JBrowse link
G Mtor mechanistic target of rapamycin kinase IMP RGD PMID:21073857 RGD:10040969 NCBI chr 5:164,167,985...164,277,438
Ensembl chr 5:158,884,804...158,994,311
JBrowse link
G Noct nocturnin involved_in ISS
ISO
GO_REF:0000024
(PMID:22073225)
UniProt
RGD
PMID:22073225 GO_REF:0000024 NCBI chr 2:137,422,074...137,442,282
Ensembl chr 2:135,271,189...135,291,400
JBrowse link
G Nrde2 NRDE-2, necessary for RNA interference, domain containing involved_in ISO (PMID:30842217) RGD PMID:30842217 NCBI chr 6:119,405,103...119,446,861
Ensembl chr 6:119,404,334...119,448,915
JBrowse link
G Qki QKI, KH domain containing RNA binding involved_in IMP
ISO
(PMID:32732889) RGD PMID:32732889 PMID:16855020 RGD:10045995 NCBI chr 1:52,935,357...53,047,338
Ensembl chr 1:50,387,698...50,498,831
JBrowse link
G Rbm10 RNA binding motif protein 10 IMP RGD PMID:19508861 RGD:151667451 NCBI chr  X:4,093,914...4,126,060
Ensembl chr  X:1,540,398...1,572,575
JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO
IBA
(PMID:29104163)
GO_REF:0000033
RGD
GO_Central
PMID:29104163 GO_REF:0000033 NCBI chr17:18,481,893...18,494,440
Ensembl chr17:18,275,688...18,288,102
JBrowse link
G Rbm46 RNA binding motif protein 46 acts_upstream_of_or_within ISO (PMID:25397698) RGD PMID:25397698 NCBI chr 2:168,198,324...168,242,011
Ensembl chr 2:168,198,463...168,242,011
JBrowse link
G Secisbp2 SECIS binding protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:27956496)
Ensembl
RGD
PMID:27956496 GO_REF:0000107 NCBI chr17:13,690,263...13,721,303
Ensembl chr17:13,538,513...13,569,523
JBrowse link
G Slc11a1 solute carrier family 11 member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857755 (PMID:9009318)
Ensembl
RGD
PMID:9009318 GO_REF:0000107 NCBI chr 9:83,406,327...83,417,252
Ensembl chr 9:75,957,316...75,968,101
JBrowse link
G Srsf1 serine and arginine rich splicing factor 1 involved_in ISO (PMID:21822258) RGD PMID:21822258 NCBI chr10:73,335,519...73,342,549
Ensembl chr10:72,839,274...72,845,336
JBrowse link
G Taf15 TATA-box binding protein associated factor 15 acts_upstream_of_or_within ISO (PMID:27378374) RGD PMID:27378374 NCBI chr10:68,272,921...68,304,951
Ensembl chr10:68,272,969...68,304,949
JBrowse link
G Tent5a terminal nucleotidyltransferase 5A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:95,102,349...95,109,100
Ensembl chr 8:86,225,357...86,229,045
JBrowse link
G Tent5b terminal nucleotidyltransferase 5B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:145,695,358...145,702,668
Ensembl chr 5:145,695,362...145,706,073
Ensembl chr11:145,695,362...145,706,073
JBrowse link
G Tent5c terminal nucleotidyltransferase 5C involved_in ISO
IBA
IEA
ISS
(PMID:28931820)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024
RGD
GO_Central
Ensembl
UniProt
PMID:28931820 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:187,853,026...187,875,260
Ensembl chr 2:187,853,024...187,894,744
JBrowse link
G Tent5d terminal nucleotidyltransferase 5D involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:72,901,287...72,974,562
Ensembl chr  X:72,901,241...72,970,573
JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 involved_in ISO
ISS
(PMID:18794151)
GO_REF:0000024
RGD
UniProt
PMID:18794151 GO_REF:0000024 NCBI chr 5:143,729,821...143,772,105
Ensembl chr 5:138,445,295...138,487,477
JBrowse link
G Traf2 Tnf receptor-associated factor 2 involved_in ISO (PMID:21822258) RGD PMID:21822258 NCBI chr 3:28,740,098...28,764,752
Ensembl chr 3:8,341,951...8,366,538
JBrowse link
G Traf3ip2 Traf3 interacting protein 2 involved_in ISO (PMID:17785852), (PMID:21822258) RGD PMID:17785852 PMID:21822258 NCBI chr20:44,565,992...44,609,240
Ensembl chr20:43,011,450...43,054,667
JBrowse link
G Traf5 TNF receptor-associated factor 5 involved_in ISO (PMID:21822258) RGD PMID:21822258 NCBI chr13:103,569,944...103,618,747
Ensembl chr13:103,572,314...103,618,709
JBrowse link
G Vegfa vascular endothelial growth factor A IDA RGD PMID:12881220 RGD:1580563 NCBI chr 9:22,452,854...22,468,194
Ensembl chr 9:14,955,300...14,970,641
JBrowse link
G Vip vasoactive intestinal peptide involved_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 1:44,470,232...44,478,561
Ensembl chr 1:42,065,120...42,073,216
JBrowse link
G Ybx1 Y box binding protein 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:31358969)
UniProt
RGD
PMID:31358969 GO_REF:0000024 NCBI chr 5:138,167,444...138,188,155
Ensembl chr 5:132,882,145...132,898,862
JBrowse link
G Ybx2 Y box binding protein 2 acts_upstream_of_or_within ISO MGI:3576937 (PMID:17035640) RGD PMID:17035640 NCBI chr10:55,158,420...55,164,077
Ensembl chr10:54,659,719...54,665,371
JBrowse link
G Zar1 zygote arrest 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:36264786)
UniProt
RGD
PMID:36264786 GO_REF:0000024 NCBI chr14:35,193,446...35,197,382
Ensembl chr14:35,193,446...35,197,382
JBrowse link
G Zc3h14 zinc finger CCCH type containing 14 involved_in ISS
ISO
GO_REF:0000024
(PMID:27563065)
UniProt
RGD
PMID:27563065 GO_REF:0000024 NCBI chr 6:123,736,120...123,773,775
Ensembl chr 6:118,006,458...118,044,105
JBrowse link
negative regulation of 3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mettl16 methyltransferase 16, RNA N6-adenosine involved_in ISO (PMID:28525753) RGD PMID:28525753 NCBI chr10:60,139,317...60,185,438
Ensembl chr10:59,640,972...59,687,061
JBrowse link
G Qki QKI, KH domain containing RNA binding involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:31868295)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:31868295 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:52,935,357...53,047,338
Ensembl chr 1:50,387,698...50,498,831
JBrowse link
G Zfp36 zinc finger protein 36 involved_in ISO (PMID:21606497) RGD PMID:21606497 NCBI chr 1:92,796,628...92,799,108
Ensembl chr 1:83,669,084...83,671,564
JBrowse link
negative regulation of aggrephagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hdac6 histone deacetylase 6 involved_in ISO (PMID:31857589) RGD PMID:31857589 NCBI chr  X:17,222,538...17,244,373
Ensembl chr  X:14,551,044...14,572,441
JBrowse link
G Lypla1 lysophospholipase 1 involved_in ISO (PMID:37802024) RGD PMID:37802024 NCBI chr 5:19,477,408...19,506,568
Ensembl chr 5:14,679,606...14,708,746
JBrowse link
negative regulation of apoptotic DNA fragmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dffa DNA fragmentation factor subunit alpha acts_upstream_of_or_within
involved_in
ISO (PMID:15572351)
MGI:2179456 (PMID:10601318), (PMID:14663139)
(PMID:11371636)
RGD PMID:10601318 PMID:11371636 PMID:14663139 PMID:15572351 NCBI chr 5:164,823,807...164,836,729
Ensembl chr 5:159,540,715...159,553,633
JBrowse link
G Dffb DNA fragmentation factor subunit beta involved_in ISO
IEA
(PMID:11371636)
GO_REF:0000107
RGD
Ensembl
PMID:11371636 GO_REF:0000107 NCBI chr 5:169,804,873...169,817,157
Ensembl chr 5:164,522,463...164,534,628
JBrowse link
G Nmnat1 nicotinamide nucleotide adenylyltransferase 1 IMP RGD PMID:27184051 RGD:13781945 NCBI chr 5:165,193,301...165,211,213
Ensembl chr 5:159,910,242...159,928,180
JBrowse link
G Pam16 presequence translocase associated motor 16 IDA RGD PMID:24069394 RGD:13462066 NCBI chr10:10,942,534...10,950,654
Ensembl chr10:10,943,001...10,950,649
JBrowse link
negative regulation of arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 involved_in ISO (PMID:19278978) RGD PMID:19278978 NCBI chr13:47,708,157...47,807,389
Ensembl chr13:45,156,146...45,255,246
JBrowse link
negative regulation of autophagosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Becn1 beclin 1 acts_upstream_of_or_within ISO MGI:2683833 (PMID:27994061) RGD PMID:27994061 NCBI chr10:86,731,649...86,747,002
Ensembl chr10:86,231,388...86,246,742
JBrowse link
G Ehmt2 euchromatic histone lysine methyltransferase 2 acts_upstream_of_or_within ISO (PMID:23918802) RGD PMID:23918802 NCBI chr20:3,924,263...3,941,238
Ensembl chr20:3,919,624...3,941,547
JBrowse link
G Fez1 fasciculation and elongation protein zeta 1 involved_in ISO
ISS
(PMID:25495476)
GO_REF:0000024
RGD
GO_Central
PMID:25495476 GO_REF:0000024 NCBI chr 8:44,733,288...44,778,519
Ensembl chr 8:36,544,535...36,589,683
JBrowse link
G Fez2 fasciculation and elongation protein zeta 2 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:25495476)
GO_Central
Ensembl
RGD
PMID:25495476 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:22,406,685...22,446,745
Ensembl chr 6:16,654,614...16,694,626
JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in ISO (PMID:23916833) RGD PMID:23916833 NCBI chr 7:124,706,246...124,867,234
Ensembl chr 7:122,826,696...122,987,703
JBrowse link
G Mtm1 myotubularin 1 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:2450997 (PMID:23695157)
GO_Central
RGD
PMID:23695157 GO_REF:0000033 NCBI chr 6:6,234,917...6,252,874
Ensembl chr 6:488,969...506,860
JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator involved_in ISS
ISO
GO_REF:0000024
(PMID:20181828)
UniProt
RGD
PMID:20181828 GO_REF:0000024 NCBI chr 1:190,643,866...190,645,901
Ensembl chr 1:181,213,368...181,215,281
JBrowse link
G Phf23 PHD finger protein 23 involved_in ISO
IBA
IEA
ISS
(PMID:25484098)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024
RGD
GO_Central
Ensembl
PMID:25484098 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr10:55,217,351...55,221,471
Ensembl chr10:54,717,724...54,722,782
JBrowse link
G Pink1 PTEN induced kinase 1 involved_in ISO (PMID:19279012) RGD PMID:19279012 NCBI chr 5:155,813,838...155,825,950
Ensembl chr 5:150,530,523...150,542,635
JBrowse link
G Scfd1 sec1 family domain containing 1 involved_in ISO (PMID:21242315) RGD PMID:21242315 NCBI chr 6:74,531,225...74,609,463
Ensembl chr 6:68,795,878...68,874,078
JBrowse link
G Sec22b SEC22 homolog B, vesicle trafficking protein involved_in ISO (PMID:21242315) RGD PMID:21242315 NCBI chr 2:188,188,783...188,209,565
Ensembl chr 2:185,500,004...185,522,026
JBrowse link
G Smcr8 SMCR8-C9orf72 complex subunit involved_in ISO (PMID:28195531) RGD PMID:28195531 NCBI chr10:45,957,146...45,968,388
Ensembl chr10:45,457,605...45,468,876
JBrowse link
G Tmem39a transmembrane protein 39a involved_in ISO
IBA
ISS
(PMID:31806350)
GO_REF:0000033
GO_REF:0000024
RGD
GO_Central
UniProt
PMID:31806350 GO_REF:0000024 GO_REF:0000033 NCBI chr11:75,666,154...75,695,486
Ensembl chr11:62,160,631...62,189,964
JBrowse link
negative regulation of autophagosome maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec16a C-type lectin domain containing 16A involved_in ISO (PMID:28223137) RGD PMID:28223137 NCBI chr10:5,434,725...5,631,246
Ensembl chr10:4,928,030...5,123,578
JBrowse link
G Phf23 PHD finger protein 23 involved_in ISO
IBA
IEA
ISS
(PMID:25484098)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024
RGD
GO_Central
Ensembl
PMID:25484098 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr10:55,217,351...55,221,471
Ensembl chr10:54,717,724...54,722,782
JBrowse link
G Rubcn rubicon autophagy regulator involved_in ISO
IBA
(PMID:21062745)
GO_REF:0000033
RGD
GO_Central
PMID:21062745 GO_REF:0000033 NCBI chr11:81,420,261...81,469,415
Ensembl chr11:67,907,516...67,964,314
JBrowse link
G Tmem39a transmembrane protein 39a involved_in ISO
IBA
ISS
(PMID:31806350)
GO_REF:0000033
GO_REF:0000024
RGD
GO_Central
UniProt
PMID:31806350 GO_REF:0000024 GO_REF:0000033 NCBI chr11:75,666,154...75,695,486
Ensembl chr11:62,160,631...62,189,964
JBrowse link
G Ubqln4 ubiquilin 4 involved_in ISO (PMID:23459205) RGD PMID:23459205 NCBI chr 2:176,310,524...176,325,724
Ensembl chr 2:174,012,777...174,028,059
JBrowse link
negative regulation of autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra1a adrenoceptor alpha 1A involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:27994061)
Ensembl
RGD
PMID:27994061 GO_REF:0000107 NCBI chr15:45,005,648...45,111,416
Ensembl chr15:40,832,534...40,927,500
JBrowse link
G Akt1 AKT serine/threonine kinase 1 involved_in ISO
IEA
(PMID:18387192)
GO_REF:0000107
RGD
Ensembl
PMID:18387192 GO_REF:0000107 NCBI chr 6:137,534,810...137,555,131
Ensembl chr 6:131,713,720...131,733,921
JBrowse link
G Bcl2 BCL2, apoptosis regulator involved_in ISO
IEA
ISS
(PMID:21358617)
(PMID:36812915)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:21358617 PMID:36812915 GO_REF:0000024 GO_REF:0000107 NCBI chr13:23,204,464...23,366,900
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743
JBrowse link
G Becn1 beclin 1 acts_upstream_of_or_within ISO (PMID:27994061) RGD PMID:27994061 NCBI chr10:86,731,649...86,747,002
Ensembl chr10:86,231,388...86,246,742
JBrowse link
G Bmf Bcl2 modifying factor involved_in ISO
IBA
IEA
(PMID:23629966)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:23629966 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:125,953,466...125,974,087
Ensembl chr 3:105,499,538...105,520,145
JBrowse link
G Cptp ceramide-1-phosphate transfer protein involved_in ISS
ISO
GO_REF:0000024
(PMID:29164996)
UniProt
RGD
PMID:29164996 GO_REF:0000024 NCBI chr 5:171,757,181...171,761,271
Ensembl chr 5:166,474,966...166,479,017
JBrowse link
G Dap death-associated protein involved_in ISO
IBA
(PMID:20537536)
GO_REF:0000033
RGD
GO_Central
PMID:20537536 GO_REF:0000033 NCBI chr 2:83,910,113...83,962,673
Ensembl chr 2:82,199,280...82,251,752
JBrowse link
G Dapl1 death associated protein-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:43,960,993...43,980,940
Ensembl chr 3:43,960,810...43,980,940
JBrowse link
G Eif4e eukaryotic translation initiation factor 4E NOT|involved_in ISO (PMID:18426977) RGD PMID:18426977 NCBI chr 2:229,736,309...229,772,628
Ensembl chr 2:227,066,673...227,098,683
JBrowse link
G Eif4g1 eukaryotic translation initiation factor 4 gamma 1 involved_in ISO (PMID:18426977) RGD PMID:18426977 NCBI chr11:93,726,322...93,746,387
Ensembl chr11:80,221,919...80,241,941
JBrowse link
G Eif4g2 eukaryotic translation initiation factor 4, gamma 2 involved_in ISO (PMID:18426977) RGD PMID:18426977 NCBI chr 1:174,616,102...174,628,252
Ensembl chr 1:165,181,434...165,193,588
JBrowse link
G Eif4g3 eukaryotic translation initiation factor 4 gamma, 3 NOT|involved_in ISO (PMID:18426977) RGD PMID:18426977 NCBI chr 5:150,197,410...150,418,862
Ensembl chr 5:150,195,226...150,418,363
JBrowse link
G Ep300 E1A binding protein p300 involved_in ISO (PMID:32561715) RGD PMID:32561715 NCBI chr 7:114,987,857...115,058,652
Ensembl chr 7:113,106,247...113,136,088
Ensembl chr 7:113,106,247...113,136,088
JBrowse link
G Erfe erythroferrone involved_in ISS
ISO
GO_REF:0000024
(PMID:24187137)
UniProt
RGD
PMID:24187137 GO_REF:0000024 NCBI chr 9:99,404,512...99,412,383
Ensembl chr 9:91,956,977...91,964,846
JBrowse link
G Foxk1 forkhead box K1 involved_in ISO (PMID:25402684) RGD PMID:25402684 NCBI chr12:17,223,599...17,288,564
Ensembl chr12:12,115,950...12,175,089
JBrowse link
G Foxk2 forkhead box K2 involved_in ISO (PMID:25402684) RGD PMID:25402684 NCBI chr10:107,040,933...107,090,860
Ensembl chr10:106,542,566...106,592,563
JBrowse link
G Gata4 GATA binding protein 4 IMP RGD PMID:19901028 RGD:5131537 NCBI chr15:41,635,572...41,707,252
Ensembl chr15:37,459,601...37,505,636
JBrowse link
G Golga2 golgin A2 involved_in ISO (PMID:22735382) RGD PMID:22735382 NCBI chr 3:15,583,862...15,604,279
Ensembl chr 3:15,584,039...15,604,279
JBrowse link
G Herc1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 acts_upstream_of_or_within ISO MGI:3613033 (PMID:20041218) RGD PMID:20041218 NCBI chr 8:75,796,347...75,965,347
Ensembl chr 8:66,856,935...67,070,312
JBrowse link
G Il10 interleukin 10 involved_in ISO (PMID:26962683) RGD PMID:26962683 NCBI chr13:45,024,921...45,029,586
Ensembl chr13:42,472,839...42,477,313
JBrowse link
G Il10ra interleukin 10 receptor subunit alpha involved_in ISO (PMID:26962683) RGD PMID:26962683 NCBI chr 8:54,459,754...54,474,786
Ensembl chr 8:45,563,137...45,578,061
JBrowse link
G Il3 interleukin 3 acts_upstream_of_or_within ISO (PMID:15680329) RGD PMID:15680329 NCBI chr10:38,906,460...38,908,810
Ensembl chr10:38,405,716...38,408,066
JBrowse link
G Kdm4a lysine demethylase 4A involved_in ISO (PMID:25660547) RGD PMID:25660547 NCBI chr 5:136,958,178...137,004,942
Ensembl chr 5:131,672,754...131,719,501
JBrowse link
G Klhl22 kelch-like family member 22 involved_in ISS
ISO
GO_REF:0000024
(PMID:29769719)
UniProt
RGD
PMID:29769719 GO_REF:0000024 NCBI chr11:96,695,168...96,736,079
Ensembl chr11:83,190,891...83,231,770
JBrowse link
G Lep leptin involved_in ISO
ISS
(PMID:25060689)
GO_REF:0000024
RGD
UniProt
PMID:25060689 GO_REF:0000024 NCBI chr 4:58,626,529...58,640,663
Ensembl chr 4:57,661,131...57,675,262
JBrowse link
G Lepr leptin receptor involved_in ISO
IEA
ISS
(PMID:25060689)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:25060689 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:121,409,735...121,593,201
Ensembl chr 5:116,289,823...116,475,908
JBrowse link
G Mcl1 MCL1 apoptosis regulator, BCL2 family member involved_in ISO (PMID:24113155) RGD PMID:24113155 NCBI chr 2:185,884,840...185,912,532
Ensembl chr 2:183,219,220...183,222,303
JBrowse link
G Mir223 microRNA 223 IDA RGD PMID:29608885 RGD:21408565 NCBI chr  X:65,151,383...65,151,492
Ensembl chr  X:61,141,887...61,141,996
JBrowse link
G Mtmr9 myotubularin related protein 9 involved_in ISO UniProtKB:Q96EF0-1 (PMID:22647598) RGD PMID:22647598 NCBI chr15:37,769,161...37,791,195
Ensembl chr15:37,769,078...37,791,244
JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in IMP
ISO
IEA
ISS
(PMID:21258367)
GO_REF:0000117
(PMID:22424946), (PMID:22576015), (PMID:30704899), (PMID:32561715)
GO_REF:0000024
RGD
UniProt
PMID:21258367 PMID:22424946 PMID:22576015 PMID:30704899 PMID:32561715 More... GO_REF:0000024 GO_REF:0000117, RGD:10040964 NCBI chr 5:164,167,985...164,277,438
Ensembl chr 5:158,884,804...158,994,311
JBrowse link
G Nampt nicotinamide phosphoribosyltransferase IMP RGD PMID:26601421 RGD:13781888 NCBI chr 6:55,152,756...55,189,547
Ensembl chr 6:49,424,332...49,462,100
JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator involved_in ISS
ISO
IMP
GO_REF:0000024
(PMID:20181828)
UniProt
RGD
PMID:20181828 PMID:20181828 GO_REF:0000024, RGD:14390062 NCBI chr 1:190,643,866...190,645,901
Ensembl chr 1:181,213,368...181,215,281
JBrowse link
G Ptk2 protein tyrosine kinase 2 acts_upstream_of_or_within ISO (PMID:27994061) RGD PMID:27994061 NCBI chr 7:107,015,730...107,220,865
Ensembl chr 7:105,126,728...105,331,783
JBrowse link
G Ptpn22 protein tyrosine phosphatase, non-receptor type 22 involved_in ISO (PMID:23991106) RGD PMID:23991106 NCBI chr 2:194,055,165...194,103,209
Ensembl chr 2:191,366,808...191,414,779
JBrowse link
G Rasip1 Ras interacting protein 1 involved_in ISO (PMID:22354037) RGD PMID:22354037 NCBI chr 1:105,233,599...105,246,028
Ensembl chr 1:96,091,074...96,109,562
JBrowse link
G Rnf5 ring finger protein 5 acts_upstream_of_or_within ISO MGI:3775796 (PMID:23093945) RGD PMID:23093945 NCBI chr20:4,150,032...4,152,593
Ensembl chr20:4,145,507...4,147,985
JBrowse link
G Rptor regulatory associated protein of MTOR, complex 1 involved_in ISO (PMID:32561715) RGD PMID:32561715 NCBI chr10:105,376,943...105,675,416
Ensembl chr10:104,878,487...105,176,983
JBrowse link
G Rraga Ras-related GTP binding A involved_in ISO
IBA
IEA
ISS
(PMID:25936802)
(PMID:23263183)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024
RGD
GO_Central
Ensembl
UniProt
PMID:23263183 PMID:25936802 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:106,159,335...106,160,930
Ensembl chr 5:101,112,859...101,114,510
JBrowse link
G Rragb Ras-related GTP binding B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:21,560,313...21,610,550
Ensembl chr  X:18,184,992...18,234,639
JBrowse link
G Rragc Ras-related GTP binding C involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:141,433,014...141,452,546
Ensembl chr 5:136,148,276...136,167,767
JBrowse link
G Rragd Ras-related GTP binding D involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:52,170,234...52,205,700
Ensembl chr 5:47,373,463...47,409,356
JBrowse link
G Rubcn rubicon autophagy regulator involved_in ISO (PMID:19270696) RGD PMID:19270696 NCBI chr11:81,420,261...81,469,415
Ensembl chr11:67,907,516...67,964,314
JBrowse link
G Sirt2 sirtuin 2 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:20543840)
UniProt
Ensembl
RGD
PMID:20543840 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:93,181,472...93,204,499
Ensembl chr 1:84,052,903...84,076,975
JBrowse link
G Slc7a5 solute carrier family 7 member 5 IMP RGD PMID:25049270 RGD:151361107 NCBI chr19:66,843,808...66,872,412
Ensembl chr19:49,935,220...49,963,823
JBrowse link
G Stat3 signal transducer and activator of transcription 3 involved_in ISO
IEA
(PMID:26962683)
GO_REF:0000107
RGD
Ensembl
PMID:26962683 GO_REF:0000107 NCBI chr10:86,311,528...86,363,513
Ensembl chr10:85,811,218...85,863,057
JBrowse link
G Stk38l serine/threonine kinase 38 like involved_in ISO (PMID:35670107) RGD PMID:35670107 NCBI chr 4:179,616,288...179,693,177
Ensembl chr 4:179,634,275...179,690,983
JBrowse link
G Tbc1d14 TBC1 domain family, member 14 involved_in IEA
ISO
GO_REF:0000107
(PMID:22613832)
Ensembl
RGD
PMID:22613832 GO_REF:0000107 NCBI chr14:74,172,652...74,272,182
Ensembl chr14:74,172,664...74,272,183
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO UniProtKB:P05067|UniProtKB:P49768 (PMID:28802038) RGD PMID:28802038 NCBI chr 9:20,145,215...20,151,797
Ensembl chr 9:12,647,259...12,654,170
JBrowse link
G Trim27 tripartite motif-containing 27 involved_in ISO (PMID:35670107) RGD PMID:35670107 NCBI chr17:48,233,999...48,246,348
Ensembl chr17:43,538,285...43,550,643
JBrowse link
G Vhl von Hippel-Lindau tumor suppressor involved_in ISO (PMID:30902965) RGD PMID:30902965 NCBI chr 4:148,328,099...148,334,992
Ensembl chr 4:146,772,468...146,779,377
JBrowse link
G Washc1 WASH complex subunit 1 involved_in ISO (PMID:23974797) RGD PMID:23974797 NCBI chr 9:113,169,730...113,179,829
Ensembl chr 9:105,722,899...105,733,009
JBrowse link
G Wdr6 WD repeat domain 6 involved_in ISO
IEA
(PMID:22354037)
GO_REF:0000107
RGD
Ensembl
PMID:22354037 GO_REF:0000107 NCBI chr 8:118,146,608...118,153,024
Ensembl chr 8:109,268,079...109,274,499
JBrowse link
G Wnk1 WNK lysine deficient protein kinase 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:27911840)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:27911840 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:154,800,590...154,926,147
Ensembl chr 4:153,128,334...153,253,905
JBrowse link
G Zkscan3 zinc finger with KRAB and SCAN domains 3 involved_in ISO (PMID:23434374) RGD PMID:23434374 NCBI chr17:47,912,816...47,928,553
Ensembl chr17:43,217,222...43,232,827
JBrowse link
negative regulation of catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zdhhc7 zinc finger DHHC-type palmitoyltransferase 7 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:25301068)
UniProt
Ensembl
RGD
PMID:25301068 GO_REF:0000024 GO_REF:0000107 NCBI chr19:48,139,309...48,156,673
Ensembl chr19:48,139,527...48,156,673
JBrowse link
negative regulation of chaperone-mediated autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctsa cathepsin A involved_in ISO UniProtKB:P10619 (PMID:12505983) RGD PMID:12505983 NCBI chr 3:173,988,443...173,994,320
Ensembl chr 3:153,568,381...153,576,215
JBrowse link
G Snca synuclein alpha involved_in ISO
IEA
(PMID:20697033)
GO_REF:0000107
RGD
Ensembl
PMID:20697033 GO_REF:0000107 NCBI chr 4:91,026,474...91,127,444
Ensembl chr 4:89,696,420...89,796,262
JBrowse link
negative regulation of collagen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cst3 cystatin C involved_in ISO (PMID:10545518) RGD PMID:10545518 NCBI chr 3:156,790,061...156,794,116
Ensembl chr 3:136,336,920...136,340,822
JBrowse link
negative regulation of deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 involved_in ISO (PMID:32354837) RGD PMID:32354837 NCBI chr14:78,056,115...78,099,846
Ensembl chr14:78,056,297...78,098,793
JBrowse link
negative regulation of DNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rgn regucalcin IDA RGD PMID:2001740 RGD:9590215 NCBI chr  X:4,172,537...4,190,112
Ensembl chr  X:1,619,032...1,634,450
JBrowse link
negative regulation of elastin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cst3 cystatin C involved_in ISO (PMID:10545518) RGD PMID:10545518 NCBI chr 3:156,790,061...156,794,116
Ensembl chr 3:136,336,920...136,340,822
JBrowse link
negative regulation of ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp11 aquaporin 11 involved_in ISS
ISO
GO_REF:0000024
(PMID:18606867)
UniProt
RGD
PMID:18606867 GO_REF:0000024 NCBI chr 1:161,457,752...161,467,918
Ensembl chr 1:152,046,517...152,056,725
JBrowse link
G Sgta small glutamine rich tetratricopeptide repeat co-chaperone alpha involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:23129660)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:23129660 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:9,304,381...9,321,157
Ensembl chr 7:8,653,778...8,670,458
JBrowse link
G Svip small VCP interacting protein involved_in IDA
IBA
ISO
IEA
PMID:17000876
GO_REF:0000033
(PMID:17872946)
GO_REF:0000107
GO_Central
RGD
Ensembl
PMID:17872946 PMID:17000876 GO_REF:0000033 GO_REF:0000107, RGD:10047192 NCBI chr 1:101,587,128...101,592,818
Ensembl chr 1:101,587,128...101,593,116
JBrowse link
G Ubxn1 UBX domain protein 1 involved_in ISO (PMID:21135095) RGD PMID:21135095 NCBI chr 1:215,194,418...215,198,343
Ensembl chr 1:205,745,120...205,816,520
JBrowse link
G Ubxn2a UBX domain protein 2A involved_in ISS
ISO
GO_REF:0000024
(PMID:26265139)
UniProt
RGD
PMID:26265139 GO_REF:0000024 NCBI chr 6:27,884,364...27,912,767
Ensembl chr 6:27,884,680...27,912,649
Ensembl chr20:27,884,680...27,912,649
JBrowse link
G Usp14 ubiquitin specific peptidase 14 involved_in ISO
IBA
(PMID:19135427)
GO_REF:0000033
RGD
GO_Central
PMID:19135427 GO_REF:0000033 NCBI chr18:1,018,111...1,057,727
Ensembl chr18:1,019,400...1,057,519
JBrowse link
G Usp25 ubiquitin specific peptidase 25 involved_in ISO (PMID:22590560) RGD PMID:22590560 NCBI chr11:29,088,283...29,198,323
Ensembl chr11:15,603,881...15,711,348
JBrowse link
negative regulation of fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acacb acetyl-CoA carboxylase beta involved_in ISO (PMID:12920182), (PMID:15677334) RGD PMID:12920182 PMID:15677334 NCBI chr12:48,026,394...48,138,214
Ensembl chr12:42,366,548...42,457,655
JBrowse link
G Akt1 AKT serine/threonine kinase 1 involved_in ISO
IEA
(PMID:16814735)
GO_REF:0000107
RGD
Ensembl
PMID:16814735 GO_REF:0000107 NCBI chr 6:137,534,810...137,555,131
Ensembl chr 6:131,713,720...131,733,921
JBrowse link
G Cnr1 cannabinoid receptor 1 IMP RGD PMID:19724020 RGD:2314644 NCBI chr 5:53,204,867...53,230,396
Ensembl chr 5:48,408,574...48,435,099
JBrowse link
G Dbi diazepam binding inhibitor IDA RGD PMID:11485163 RGD:2316274 NCBI chr13:33,794,231...33,802,632
Ensembl chr13:31,206,988...31,268,693
JBrowse link
G Mfsd2a MFSD2 lysolipid transporter A, lysophospholipid acts_upstream_of_or_within ISO (PMID:23209793) RGD PMID:23209793 NCBI chr 5:140,510,933...140,525,828
Ensembl chr 5:135,225,816...135,240,690
JBrowse link
G Pink1 PTEN induced kinase 1 HMP RGD PMID:25421206 RGD:11560775 NCBI chr 5:155,813,838...155,825,950
Ensembl chr 5:150,530,523...150,542,635
JBrowse link
G Plin5 perilipin 5 involved_in ISS
ISO
GO_REF:0000024
(PMID:21885430), (PMID:22532565), (PMID:22675471)
UniProt
RGD
PMID:21885430 PMID:22532565 PMID:22675471 GO_REF:0000024 NCBI chr 9:1,026,910...1,033,352
Ensembl chr 9:939,747...946,120
JBrowse link
negative regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Etfbkmt electron transfer flavoprotein subunit beta lysine methyltransferase involved_in ISO
IBA
ISS
(PMID:25416781)
GO_REF:0000033
(PMID:25023281)
GO_REF:0000024
RGD
GO_Central
UniProt
PMID:25023281 PMID:25416781 GO_REF:0000024 GO_REF:0000033 NCBI chr 4:183,871,819...183,936,843
Ensembl chr 4:182,140,559...182,150,305
JBrowse link
negative regulation of glucose catabolic process to lactate via pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc25a12 solute carrier family 25 member 12 IMP RGD PMID:19764902 RGD:13628741 NCBI chr 3:76,504,868...76,599,536
Ensembl chr 3:56,097,269...56,192,100
JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase acts_upstream_of_or_within ISO (PMID:20935145) RGD PMID:20935145 NCBI chr 4:161,613,306...161,632,248
Ensembl chr 4:159,927,139...159,946,029
Ensembl chr 6:159,927,139...159,946,029
JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:20935145)
Ensembl
RGD
PMID:20935145 GO_REF:0000107 NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,300,048...54,311,524
JBrowse link
negative regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra1b adrenoceptor alpha 1B acts_upstream_of_or_within ISO MGI:2148638 (PMID:14581480) RGD PMID:14581480 NCBI chr10:28,756,461...28,874,831
Ensembl chr10:28,255,025...28,312,919
JBrowse link
G Ins2 insulin 2 involved_in ISO (PMID:381941) RGD PMID:381941 NCBI chr 1:207,272,738...207,421,998
Ensembl chr 1:197,843,281...197,864,775
JBrowse link
G Ppp1r3b protein phosphatase 1, regulatory subunit 3B involved_in ISO (PMID:22225877) RGD PMID:22225877 NCBI chr16:63,533,318...63,545,683
Ensembl chr16:56,829,660...56,842,406
JBrowse link
negative regulation of glycolytic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 involved_in ISO (PMID:17828264) RGD PMID:17828264 NCBI chr 1:211,588,473...211,604,401
Ensembl chr 1:202,159,082...202,175,012
JBrowse link
G Cbfa2t3 CBFA2/RUNX1 partner transcriptional co-repressor 3 involved_in ISO (PMID:23840896) RGD PMID:23840896 NCBI chr19:67,584,319...67,658,533
Ensembl chr19:50,680,729...50,749,610
JBrowse link
G Ddit4 DNA-damage-inducible transcript 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:20176937)
Ensembl
RGD
PMID:20176937 GO_REF:0000107 NCBI chr20:28,434,938...28,437,037
Ensembl chr20:27,891,998...27,894,105
JBrowse link
G Fbp1 fructose-bisphosphatase 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:19881551), (PMID:25043030)
UniProt
Ensembl
RGD
PMID:19881551 PMID:25043030 GO_REF:0000024 GO_REF:0000107 NCBI chr17:2,212,941...2,235,749
Ensembl chr17:2,208,031...2,230,071
JBrowse link
G Flcn folliculin involved_in ISO (PMID:34381247) RGD PMID:34381247 NCBI chr10:45,088,164...45,107,581
Ensembl chr10:44,588,624...44,607,769
JBrowse link
G Git1 GIT ArfGAP 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:32460388)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:32460388 GO_REF:0000024 GO_REF:0000107 NCBI chr10:62,840,165...62,854,508
Ensembl chr10:62,342,299...62,356,373
JBrowse link
G Hdac4 histone deacetylase 4 involved_in IEA
ISO
GO_REF:0000107
(PMID:19109424)
Ensembl
RGD
PMID:19109424 GO_REF:0000107 NCBI chr 9:99,950,972...100,200,994
Ensembl chr 9:92,507,611...92,750,164
JBrowse link
G Ier3 immediate early response 3 acts_upstream_of_or_within ISO MGI:3773690 (PMID:19096392) RGD PMID:19096392 NCBI chr20:2,933,173...2,934,377
Ensembl chr20:2,928,378...2,929,583
JBrowse link
G Mtch2 mitochondrial carrier 2 acts_upstream_of_or_within ISO MGI:2449949|MGI:5566664 (PMID:26219591) RGD PMID:26219591 NCBI chr 3:97,286,388...97,306,028
Ensembl chr 3:76,830,413...76,850,189
JBrowse link
G Myog myogenin IDA RGD PMID:10225962 RGD:9686132 NCBI chr13:48,297,476...48,300,065
Ensembl chr13:45,745,436...45,748,039
JBrowse link
G Ncor1 nuclear receptor co-repressor 1 involved_in ISO
IEA
(PMID:19955185)
GO_REF:0000107
RGD
Ensembl
PMID:19955185 GO_REF:0000107 NCBI chr10:47,498,852...47,641,612
Ensembl chr10:46,999,536...47,141,032
JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator involved_in ISO
ISS
(PMID:30451898)
GO_REF:0000024
RGD
UniProt
PMID:30451898 GO_REF:0000024 NCBI chr 1:190,643,866...190,645,901
Ensembl chr 1:181,213,368...181,215,281
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha involved_in ISO (PMID:19955185) RGD PMID:19955185 NCBI chr 7:118,712,261...118,780,723
Ensembl chr 7:116,832,756...116,895,346
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha IMP RGD PMID:22343369 RGD:7242186 NCBI chr14:63,073,505...63,729,215
Ensembl chr14:58,861,144...59,512,656
JBrowse link
G Sik2 salt-inducible kinase 2 involved_in ISO (PMID:21084751) RGD PMID:21084751 NCBI chr 8:60,121,913...60,221,707
Ensembl chr 8:51,225,543...51,325,415
JBrowse link
G Sirt6 sirtuin 6 involved_in ISO (PMID:26456828)
(PMID:20141841), (PMID:23217706)
RGD PMID:20141841 PMID:23217706 PMID:26456828 NCBI chr 7:8,733,056...8,738,543
Ensembl chr 7:8,082,364...8,098,914
JBrowse link
G Stat3 signal transducer and activator of transcription 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:22891351)
Ensembl
RGD
PMID:22891351 GO_REF:0000107 NCBI chr10:86,311,528...86,363,513
Ensembl chr10:85,811,218...85,863,057
JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase acts_upstream_of_or_within
involved_in
ISO
IBA
(PMID:20935145)
GO_REF:0000033
RGD
GO_Central
PMID:20935145 GO_REF:0000033 NCBI chr 4:161,613,306...161,632,248
Ensembl chr 4:159,927,139...159,946,029
Ensembl chr 6:159,927,139...159,946,029
JBrowse link
G Trim63 tripartite motif containing 63 involved_in ISO (PMID:34244144) RGD PMID:34244144 NCBI chr 5:151,817,209...151,831,026
Ensembl chr 5:146,533,507...146,547,322
JBrowse link
negative regulation of glycolytic process through fructose-6-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pfkfb1 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 involved_in ISO MGI:97592 (PMID:15331593), (PMID:16155866) RGD PMID:15331593 PMID:16155866 NCBI chr  X:22,936,038...22,989,691
Ensembl chr  X:19,508,546...19,562,182
JBrowse link
G Ppp2ca protein phosphatase 2 catalytic subunit alpha involved_in ISO MGI:4950915 (PMID:32192773) RGD PMID:32192773 NCBI chr10:36,856,534...36,878,789
Ensembl chr10:36,358,101...36,377,862
JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha involved_in IEA
ISO
GO_REF:0000107
MGI:3610390 (PMID:16155866), (PMID:23292513)
Ensembl
RGD
PMID:16155866 PMID:23292513 GO_REF:0000107 NCBI chr19:41,059,843...41,083,189
Ensembl chr19:24,155,090...24,178,430
JBrowse link
G Slc4a1 solute carrier family 4 member 1 (Diego blood group) involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:18698006)
Ensembl
RGD
PMID:18698006 GO_REF:0000107 NCBI chr10:87,807,010...87,823,274
Ensembl chr10:87,306,872...87,323,117
JBrowse link
negative regulation of hydrogen peroxide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hp haptoglobin involved_in ISO (PMID:19740759) RGD PMID:19740759 NCBI chr19:54,449,151...54,453,701
Ensembl chr19:37,539,627...37,544,523
JBrowse link
G Mt3 metallothionein 3 IDA RGD PMID:12058024 RGD:625483 NCBI chr19:10,854,676...10,856,080
Ensembl chr19:10,848,755...10,850,158
JBrowse link
negative regulation of lipid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acacb acetyl-CoA carboxylase beta involved_in ISO (PMID:15677334) RGD PMID:15677334 NCBI chr12:48,026,394...48,138,214
Ensembl chr12:42,366,548...42,457,655
JBrowse link
G Adora1 adenosine A1 receptor IDA RGD PMID:15220221 RGD:1625243 NCBI chr13:48,210,922...48,247,826
Ensembl chr13:45,658,872...45,695,801
JBrowse link
G Adra2a adrenoceptor alpha 2A involved_in ISO UniProtKB:P25962 (PMID:10948198) RGD PMID:10948198 NCBI chr 1:263,066,780...263,069,580
Ensembl chr 1:253,060,218...253,064,365
JBrowse link
G Alk ALK receptor tyrosine kinase involved_in ISO (PMID:32442405) RGD PMID:32442405 NCBI chr 6:28,631,431...29,351,321
Ensembl chr 6:22,880,625...23,598,034
JBrowse link
G Apoa2 apolipoprotein A2 involved_in ISO (PMID:14967812) RGD PMID:14967812 NCBI chr13:86,176,767...86,178,819
Ensembl chr13:83,644,470...83,646,355
JBrowse link
G Apoc1 apolipoprotein C1 involved_in ISO
IBA
(PMID:15576844)
GO_REF:0000033
RGD
GO_Central
PMID:15576844 GO_REF:0000033 NCBI chr 1:88,475,018...88,479,052
Ensembl chr 1:79,346,136...79,350,375
JBrowse link
G Apoc3 apolipoprotein C3 involved_in ISO (PMID:15576844) RGD PMID:15576844 NCBI chr 8:55,428,172...55,430,352
Ensembl chr 8:46,531,478...46,533,583
JBrowse link
G Bscl2 BSCL2 lipid droplet biogenesis associated, seipin involved_in ISS
ISO
GO_REF:0000024
(PMID:22269949)
UniProt
RGD
PMID:22269949 GO_REF:0000024 NCBI chr 1:215,160,764...215,172,540
Ensembl chr 1:205,733,872...205,743,421
JBrowse link
G Cidea cell death-inducing DFFA-like effector a involved_in ISO (PMID:15919794), (PMID:26118629)
(PMID:12910269)
RGD PMID:12910269 PMID:15919794 PMID:26118629 NCBI chr18:63,164,817...63,190,384
Ensembl chr18:60,894,874...60,920,481
JBrowse link
G Cidec cell death-inducing DFFA-like effector c involved_in ISO
IEA
ISS
(PMID:18334488), (PMID:23399566)
(PMID:22144693), (PMID:23481402)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:18334488 PMID:22144693 PMID:23399566 PMID:23481402 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:148,124,924...148,137,806
Ensembl chr 4:146,569,289...146,582,173
JBrowse link
G Crtc3 CREB regulated transcription coactivator 3 acts_upstream_of_or_within ISO MGI:4879976 (PMID:21164481) RGD PMID:21164481 NCBI chr 1:143,962,038...144,064,324
Ensembl chr 1:134,554,696...134,655,500
JBrowse link
G Endou endonuclease, poly(U)-specific involved_in ISO FB:FBgn0030251 (PMID:37803019) RGD PMID:37803019 NCBI chr 7:130,723,972...130,745,672
Ensembl chr 7:128,844,862...128,866,596
JBrowse link
G Fmc1 formation of mitochondrial complex V assembly factor 1 acts_upstream_of_or_within ISO (PMID:25912136) RGD PMID:25912136 NCBI chr 4:68,241,009...68,249,045
Ensembl chr 4:67,274,104...67,282,140
JBrowse link
G Gimap5 GTPase, IMAP family member 5 IMP RGD PMID:18465680 RGD:2293508 NCBI chr 4:79,025,151...79,031,917
Ensembl chr 4:77,687,564...77,703,086
JBrowse link
G Hcar1 hydroxycarboxylic acid receptor 1 involved_in ISO (PMID:19047060) RGD PMID:19047060 NCBI chr12:38,371,593...38,374,847
Ensembl chr12:32,711,027...32,712,082
JBrowse link
G Hcar2 hydroxycarboxylic acid receptor 2 involved_in IDA PMID:19141678 UniProt PMID:19141678 RGD:8553927 NCBI chr12:38,387,163...38,389,149
Ensembl chr12:32,726,184...32,728,504
JBrowse link
G Il1b interleukin 1 beta involved_in ISO (PMID:19032770) RGD PMID:19032770 NCBI chr 3:137,030,200...137,036,581
Ensembl chr 3:116,577,010...116,583,415
JBrowse link
G Ins2 insulin 2 involved_in ISO (PMID:24675707) RGD PMID:24675707 NCBI chr 1:207,272,738...207,421,998
Ensembl chr 1:197,843,281...197,864,775
JBrowse link
G Pde3b phosphodiesterase 3B involved_in IEA
ISO
GO_REF:0000107
(PMID:11641262)
Ensembl
RGD
PMID:11641262 GO_REF:0000107 NCBI chr 1:178,041,207...178,204,503
Ensembl chr 1:168,607,022...168,769,334
JBrowse link
G Plin1 perilipin 1 involved_in ISO (PMID:21701568) RGD PMID:21701568 NCBI chr 1:143,073,612...143,086,199
Ensembl chr 1:133,664,892...133,676,828
JBrowse link
G Plin5 perilipin 5 involved_in ISO (PMID:21885430) RGD PMID:21885430 NCBI chr 9:1,026,910...1,033,352
Ensembl chr 9:939,747...946,120
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:15878856)
UniProt
RGD
PMID:15878856 GO_REF:0000024 NCBI chr 2:55,967,766...56,003,450
Ensembl chr 2:54,240,137...54,275,978
JBrowse link
G Tnf tumor necrosis factor involved_in ISO (PMID:19032770) RGD PMID:19032770 NCBI chr20:3,626,685...3,629,303
Ensembl chr20:3,622,011...3,624,629
JBrowse link
negative regulation of low-density lipoprotein particle receptor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 involved_in ISO
IEA
(PMID:22848640)
GO_REF:0000107
RGD
Ensembl
PMID:22848640 GO_REF:0000107 NCBI chr 8:78,986,252...79,022,638
Ensembl chr 8:70,105,253...70,141,658
JBrowse link
G Furin furin (paired basic amino acid cleaving enzyme) involved_in ISO
IEA
(PMID:16912035)
GO_REF:0000107
RGD
Ensembl
PMID:16912035 GO_REF:0000107 NCBI chr 1:143,757,389...143,770,430
Ensembl chr 1:134,348,144...134,364,314
JBrowse link
negative regulation of lysosomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Laptm4b lysosomal protein transmembrane 4 beta involved_in ISO
IEA
ISS
(PMID:25588945)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:25588945 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:65,434,525...65,477,386
Ensembl chr 7:65,434,394...65,477,383
JBrowse link
G Mgat3 beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase acts_upstream_of_or_within ISS
ISO
GO_REF:0000024
MGI:1857830 (PMID:25592972), (PMID:26467158)
UniProt
RGD
PMID:25592972 PMID:26467158 GO_REF:0000024 NCBI chr 7:111,708,353...111,761,825
Ensembl chr 7:111,675,730...111,762,026
JBrowse link
G Usp8 ubiquitin specific peptidase 8 involved_in ISO (PMID:27444016) RGD PMID:27444016 NCBI chr 3:113,962,136...114,009,683
Ensembl chr 3:113,962,164...114,009,666
JBrowse link
G Vps35 VPS35 retromer complex component involved_in ISO (PMID:26203154) RGD PMID:26203154 NCBI chr19:37,938,989...37,974,887
Ensembl chr19:21,765,749...21,801,618
JBrowse link
negative regulation of macroautophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmox1 heme oxygenase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2429784 (PMID:20705711)
Ensembl
RGD
PMID:20705711 GO_REF:0000107 NCBI chr19:13,452,365...13,479,823
Ensembl chr19:13,467,244...13,474,079
JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in ISO (PMID:19640926) RGD PMID:19640926 NCBI chr 7:124,706,246...124,867,234
Ensembl chr 7:122,826,696...122,987,703
JBrowse link
G Lzts1 leucine zipper tumor suppressor 1 involved_in ISO (PMID:22354037) RGD PMID:22354037 NCBI chr16:25,309,502...25,364,942
Ensembl chr16:20,542,809...20,598,203
JBrowse link
G Mtor mechanistic target of rapamycin kinase acts_upstream_of_or_within
involved_in
ISO
IBA
IEA
(PMID:25327288)
(PMID:16714284), (PMID:23274896)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:16714284 PMID:23274896 PMID:25327288 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:164,167,985...164,277,438
Ensembl chr 5:158,884,804...158,994,311
JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 acts_upstream_of_or_within ISO MGI:1857409|MGI:1891828 (PMID:17468177) RGD PMID:17468177 NCBI chr18:3,654,237...3,699,853
Ensembl chr18:3,379,482...3,425,049
JBrowse link
G Nrbp2 nuclear receptor binding protein 2 involved_in ISO (PMID:22354037) RGD PMID:22354037 NCBI chr 7:109,679,330...109,685,656
Ensembl chr 7:107,799,497...107,805,230
JBrowse link
G Pink1 PTEN induced kinase 1 involved_in ISO (PMID:19279012) RGD PMID:19279012 NCBI chr 5:155,813,838...155,825,950
Ensembl chr 5:150,530,523...150,542,635
JBrowse link
G Poldip2 DNA polymerase delta interacting protein 2 acts_upstream_of_or_within ISO MGI:4044390 (PMID:24797518) RGD PMID:24797518 NCBI chr10:63,905,287...63,915,655
Ensembl chr10:63,407,213...63,417,605
JBrowse link
G Qsox1 quiescin sulfhydryl oxidase 1 involved_in ISO (PMID:24475161) RGD PMID:24475161 NCBI chr13:70,500,060...70,537,711
Ensembl chr13:67,949,780...67,987,459
JBrowse link
G Smcr8 SMCR8-C9orf72 complex subunit involved_in ISO (PMID:28195531) RGD PMID:28195531 NCBI chr10:45,957,146...45,968,388
Ensembl chr10:45,457,605...45,468,876
JBrowse link
G Tsc1 TSC complex subunit 1 involved_in IMP PMID:23435171 ParkinsonsUK-UCL PMID:23435171 RGD:10448950 NCBI chr 3:32,367,434...32,416,565
Ensembl chr 3:11,979,729...12,015,674
JBrowse link
G Tsc2 TSC complex subunit 2 IMP RGD PMID:24599401 RGD:11568679 NCBI chr10:14,125,679...14,160,317
Ensembl chr10:13,621,136...13,655,951
JBrowse link
G Usp36 ubiquitin specific peptidase 36 involved_in ISO (PMID:22622177) RGD PMID:22622177 NCBI chr10:103,995,970...104,027,492
Ensembl chr10:103,497,349...103,528,877
JBrowse link
negative regulation of membrane protein ectodomain proteolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il10 interleukin 10 involved_in ISO
ISS
(PMID:18383040)
GO_REF:0000024
RGD
UniProt
PMID:18383040 GO_REF:0000024 NCBI chr13:45,024,921...45,029,586
Ensembl chr13:42,472,839...42,477,313
JBrowse link
G Lrig2 leucine-rich repeats and immunoglobulin-like domains 2 acts_upstream_of_or_within ISO (PMID:26651291) RGD PMID:26651291 NCBI chr 2:191,947,322...192,012,996
Ensembl chr 2:191,949,819...192,012,579
JBrowse link
G Ptpn3 protein tyrosine phosphatase, non-receptor type 3 involved_in ISO (PMID:12207026) RGD PMID:12207026 NCBI chr 5:76,703,687...76,822,584
Ensembl chr 5:71,911,135...72,065,443
JBrowse link
G Timp1 TIMP metallopeptidase inhibitor 1 involved_in ISO
IBA
(PMID:12714508)
GO_REF:0000033
RGD
GO_Central
PMID:12714508 GO_REF:0000033 NCBI chr  X:3,766,509...3,772,578
Ensembl chr  X:1,212,972...1,217,664
JBrowse link
G Timp2 TIMP metallopeptidase inhibitor 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:104,041,604...104,089,214
Ensembl chr10:103,531,505...103,590,611
JBrowse link
G Timp3 TIMP metallopeptidase inhibitor 3 involved_in ISO
IBA
IEA
(PMID:18383040)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:18383040 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:19,408,539...19,459,558
Ensembl chr 7:17,521,919...17,571,839
JBrowse link
G Timp4 TIMP metallopeptidase inhibitor 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:149,978,667...149,985,350
Ensembl chr 4:148,304,490...148,312,558
JBrowse link
negative regulation of miRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Qki QKI, KH domain containing RNA binding involved_in ISS
ISO
GO_REF:0000024
(PMID:31792053)
UniProt
RGD
PMID:31792053 GO_REF:0000024 NCBI chr 1:52,935,357...53,047,338
Ensembl chr 1:50,387,698...50,498,831
JBrowse link
G Tent2 terminal nucleotidyltransferase 2 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:23200856), (PMID:31792053)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:23200856 PMID:31792053 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:26,115,150...26,167,465
Ensembl chr 2:24,380,225...24,432,099
JBrowse link
negative regulation of mitochondrial RNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrpprc leucine-rich pentatricopeptide repeat containing involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1916394|MGI:3857306|MGI:5438913 (PMID:21880015), (PMID:22045337)
Ensembl
RGD
PMID:21880015 PMID:22045337 GO_REF:0000107 NCBI chr 6:15,612,638...15,695,113
Ensembl chr 6:9,859,867...9,942,293
JBrowse link
G Slirp SRA stem-loop interacting RNA binding protein acts_upstream_of_or_within ISO MGI:1919666 (PMID:22045337) RGD PMID:22045337 NCBI chr 6:107,088,760...107,097,791
Ensembl chr 6:107,088,403...107,097,791
JBrowse link
negative regulation of mitophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec16a C-type lectin domain containing 16A acts_upstream_of_or_within ISO MGI:5648633 (PMID:24949970) RGD PMID:24949970 NCBI chr10:5,434,725...5,631,246
Ensembl chr10:4,928,030...5,123,578
JBrowse link
G Fbxl4 F-box and leucine-rich repeat protein 4 involved_in IEA
ISO
GO_REF:0000107
(PMID:38992176)
Ensembl
RGD
PMID:38992176 GO_REF:0000107 NCBI chr 5:40,752,513...40,826,154
Ensembl chr 5:35,955,812...36,029,443
JBrowse link
G Pink1 PTEN induced kinase 1 involved_in ISO (PMID:19279012) RGD PMID:19279012 NCBI chr 5:155,813,838...155,825,950
Ensembl chr 5:150,530,523...150,542,635
JBrowse link
G Pptc7 protein phosphatase targeting COQ7 involved_in IEA
ISO
GO_REF:0000107
(PMID:38992176)
Ensembl
RGD
PMID:38992176 GO_REF:0000107 NCBI chr12:39,910,728...39,949,101
Ensembl chr12:34,249,977...34,288,339
JBrowse link
G Rnf41 ring finger protein 41 acts_upstream_of_or_within ISO MGI:1921624 (PMID:24949970) RGD PMID:24949970 NCBI chr 7:1,422,651...1,461,700
Ensembl chr 7:838,203...865,511
JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase acts_upstream_of_or_within ISO MGI:5319187 (PMID:22044588) RGD PMID:22044588 NCBI chr 4:161,613,306...161,632,248
Ensembl chr 4:159,927,139...159,946,029
Ensembl chr 6:159,927,139...159,946,029
JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857263 (PMID:22044588)
Ensembl
RGD
PMID:22044588 GO_REF:0000107 NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,300,048...54,311,524
JBrowse link
G Tspo translocator protein involved_in ISO (PMID:25470454) RGD PMID:25470454 NCBI chr 7:116,600,214...116,610,461
Ensembl chr 7:114,720,188...114,730,450
JBrowse link
G Usp30 ubiquitin specific peptidase 30 IMP RGD PMID:24896179 RGD:13208875 NCBI chr12:48,161,905...48,215,878
Ensembl chr12:42,501,348...42,555,616
JBrowse link
negative regulation of mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fxr1 FMR1 autosomal homolog 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:25225333)
Ensembl
RGD
PMID:25225333 GO_REF:0000107 NCBI chr 2:118,812,287...118,865,813
Ensembl chr 2:116,884,248...116,937,590
JBrowse link
G Pkp1 plakophilin 1 involved_in ISO (PMID:25225333) RGD PMID:25225333 NCBI chr13:49,861,340...49,909,162
Ensembl chr13:47,309,614...47,357,465
JBrowse link
G Pkp3 plakophilin 3 involved_in ISO (PMID:25225333) RGD PMID:25225333 NCBI chr 1:205,617,511...205,628,441
Ensembl chr 1:196,187,835...196,198,844
JBrowse link
negative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csde1 cold shock domain containing E1 involved_in ISO
IEA
(PMID:11051545)
GO_REF:0000107
RGD
Ensembl
PMID:11051545 GO_REF:0000107 NCBI chr 2:193,234,546...193,271,301
Ensembl chr 2:190,554,980...190,582,784
JBrowse link
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:19029303) RGD PMID:19029303 NCBI chr13:68,152,813...68,189,580
Ensembl chr13:65,602,323...65,639,069
JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D involved_in ISO (PMID:11051545) RGD PMID:11051545 NCBI chr14:9,918,630...9,938,072
Ensembl chr14:9,615,479...9,633,786
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in ISO
IEA
(PMID:19029303)
GO_REF:0000107
RGD
Ensembl
PMID:19029303 GO_REF:0000107 NCBI chr13:92,609,791...92,618,580
Ensembl chr13:90,074,181...90,086,588
JBrowse link
G Igf2bp1 insulin-like growth factor 2 mRNA binding protein 1 involved_in ISO (PMID:19029303) RGD PMID:19029303 NCBI chr10:81,405,021...81,447,814
Ensembl chr10:80,908,076...80,951,129
JBrowse link
G Pabpc1 poly(A) binding protein, cytoplasmic 1 involved_in ISO (PMID:11051545) RGD PMID:11051545 NCBI chr 7:69,662,513...69,674,806
Ensembl chr 7:67,777,381...67,789,744
JBrowse link
G Paip1 poly(A) binding protein interacting protein 1 involved_in ISO (PMID:11051545) RGD PMID:11051545 NCBI chr 2:53,255,916...53,282,965
Ensembl chr 2:51,522,921...51,550,241
JBrowse link
G Syncrip synaptotagmin binding, cytoplasmic RNA interacting protein involved_in ISO
IEA
(PMID:11051545), (PMID:19029303)
GO_REF:0000107
RGD
Ensembl
PMID:11051545 PMID:19029303 GO_REF:0000107 NCBI chr 8:98,282,358...98,315,412
Ensembl chr 8:89,402,866...89,435,515
JBrowse link
G Ybx1 Y box binding protein 1 involved_in ISO (PMID:19029303) RGD PMID:19029303 NCBI chr 5:138,167,444...138,188,155
Ensembl chr 5:132,882,145...132,898,862
JBrowse link
negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A1cf APOBEC1 complementation factor involved_in ISO (PMID:12881431) RGD PMID:12881431 NCBI chr 1:229,736,037...229,823,499
Ensembl chr 1:229,736,106...229,824,354
JBrowse link
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 involved_in ISO
IEA
(PMID:12881431)
GO_REF:0000107
RGD
Ensembl
PMID:12881431 GO_REF:0000107 NCBI chr 4:157,472,879...157,500,496
Ensembl chr 4:155,800,887...155,827,390
JBrowse link
G Dhx34 DExH-box helicase 34 involved_in ISO (PMID:23828042) RGD PMID:23828042 NCBI chr 1:86,009,047...86,034,477
Ensembl chr 1:76,880,867...76,905,113
JBrowse link
G Hnrnpab heterogeneous nuclear ribonucleoprotein A/B involved_in ISO (PMID:12881431) RGD PMID:12881431 NCBI chr10:36,358,004...36,363,898
Ensembl chr10:35,857,041...35,863,344
JBrowse link
G Nbas NBAS subunit of NRZ tethering complex involved_in ISO (PMID:23828042) RGD PMID:23828042 NCBI chr 6:36,048,357...36,353,206
Ensembl chr 6:36,048,191...36,352,984
JBrowse link
G Pabpc1 poly(A) binding protein, cytoplasmic 1 involved_in ISO
ISS
(PMID:18447585)
GO_REF:0000024
RGD
UniProt
PMID:18447585 GO_REF:0000024 NCBI chr 7:69,662,513...69,674,806
Ensembl chr 7:67,777,381...67,789,744
JBrowse link
G Secisbp2 SECIS binding protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4433050 (PMID:24274065)
Ensembl
RGD
PMID:24274065 GO_REF:0000107 NCBI chr17:13,690,263...13,721,303
Ensembl chr17:13,538,513...13,569,523
JBrowse link
G Syncrip synaptotagmin binding, cytoplasmic RNA interacting protein involved_in ISO (PMID:12881431) RGD PMID:12881431 NCBI chr 8:98,282,358...98,315,412
Ensembl chr 8:89,402,866...89,435,515
JBrowse link
G Upf3a UPF3A, regulator of nonsense mediated mRNA decay involved_in ISO MGI:107995|MGI:1915384 (PMID:27040500) RGD PMID:27040500 NCBI chr16:82,459,651...82,470,686
Ensembl chr16:75,757,441...75,769,345
JBrowse link
negative regulation of nuclear-transcribed mRNA poly(A) tail shortening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tent4a terminal nucleotidyltransferase 4A involved_in ISO (PMID:30026317) RGD PMID:30026317 NCBI chr 1:33,765,949...33,799,405
Ensembl chr 1:33,765,672...33,799,433
JBrowse link
G Tent4b terminal nucleotidyltransferase 4B involved_in ISO (PMID:30026317) RGD PMID:30026317 NCBI chr19:18,807,616...18,868,969
Ensembl chr19:18,807,525...18,869,537
JBrowse link
G Tob1 transducer of ErbB-2.1 involved_in ISO
IEA
ISS
(PMID:18377426)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:18377426 GO_REF:0000024 GO_REF:0000107 NCBI chr10:79,659,993...79,662,031
Ensembl chr10:79,160,154...79,165,215
JBrowse link
negative regulation of ornithine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Oaz1 ornithine decarboxylase antizyme 1 IDA RGD PMID:8166639 RGD:401851045 NCBI chr 7:9,534,530...9,536,990
Ensembl chr 7:8,883,851...8,886,310
JBrowse link
negative regulation of pentose-phosphate shunt term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldob aldolase, fructose-bisphosphate B involved_in IEA
ISO
GO_REF:0000107
(PMID:35122041)
Ensembl
RGD
PMID:35122041 GO_REF:0000107 NCBI chr 5:68,684,541...68,697,582
Ensembl chr 5:63,889,046...63,902,116
JBrowse link
G Tp53 tumor protein p53 involved_in ISO
IEA
(PMID:21336310)
GO_REF:0000107
RGD
Ensembl
PMID:21336310 GO_REF:0000107 NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,300,048...54,311,524
JBrowse link
negative regulation of phosphatidylcholine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoc1 apolipoprotein C1 involved_in ISO (PMID:2302419) RGD PMID:2302419 NCBI chr 1:88,475,018...88,479,052
Ensembl chr 1:79,346,136...79,350,375
JBrowse link
negative regulation of proteasomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alad aminolevulinate dehydratase involved_in ISO (PMID:8175643) RGD PMID:8175643 NCBI chr 5:80,977,562...80,987,901
Ensembl chr 5:75,961,993...75,972,474
JBrowse link
G F8a1 coagulation factor VIII-associated 1 involved_in ISO
ISS
(PMID:27815841)
GO_REF:0000024
RGD
UniProt
PMID:27815841 GO_REF:0000024 NCBI chr  X:155,977,859...155,979,373
Ensembl chr  X:150,916,679...150,960,168
JBrowse link
G Gabarapl2 GABA type A receptor associated protein like 2 involved_in ISO (PMID:21669198) RGD PMID:21669198 NCBI chr19:56,819,826...56,830,662
Ensembl chr19:39,910,534...39,924,628
JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 involved_in IMP
ISO
PMID:17517623
(PMID:17517623)
RGD PMID:17517623 PMID:17517623 RGD:13514081 NCBI chr 9:22,930,249...22,935,929
Ensembl chr 9:15,433,691...15,438,488
JBrowse link
G Lamp3 lysosomal-associated membrane protein 3 involved_in ISO (PMID:25681212) RGD PMID:25681212 NCBI chr11:94,657,817...94,726,451
Ensembl chr11:81,193,649...81,221,784
JBrowse link
G LOC134484027 40-kDa huntingtin-associated protein involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024
G Marchf7 membrane associated ring-CH-type finger 7 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:29295817)
UniProt
Ensembl
RGD
PMID:29295817 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:65,090,640...65,128,768
Ensembl chr 3:44,681,632...44,720,168
JBrowse link
G Ophn1 oligophrenin 1 involved_in IBA
ISO
GO_REF:0000033
(PMID:21874017)
GO_Central
RGD
PMID:21874017 GO_REF:0000033 NCBI chr  X:63,599,746...63,976,678
Ensembl chr  X:63,603,042...63,976,633
JBrowse link
G Prkcg protein kinase C, gamma involved_in ISS
ISO
GO_REF:0000024
(PMID:23185022)
UniProt
RGD
PMID:23185022 GO_REF:0000024 NCBI chr 1:74,748,272...74,777,611
Ensembl chr 1:65,832,855...65,859,384
JBrowse link
G Psme3ip1 proteasome activator subunit 3 interacting protein 1 involved_in ISO (PMID:29934401) RGD PMID:29934401 NCBI chr19:10,401,400...10,430,059
Ensembl chr19:10,401,532...10,429,987
JBrowse link
G Psmf1 proteasome inhibitor subunit 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:10764772)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:10764772 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:160,695,744...160,720,915
Ensembl chr 3:140,235,373...140,260,546
JBrowse link
G Sco1 synthesis of cytochrome C oxidase 1 acts_upstream_of_or_within ISO MGI:2176228|MGI:5758867 (PMID:25683716) RGD PMID:25683716 NCBI chr10:52,243,664...52,256,250
Ensembl chr10:51,744,656...51,757,237
JBrowse link
G Usp19 ubiquitin specific peptidase 19 involved_in ISO (PMID:25088257) RGD PMID:25088257 NCBI chr 8:118,069,227...118,080,283
Ensembl chr 8:109,190,724...109,201,741
JBrowse link
negative regulation of proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag5 BAG cochaperone 5 involved_in ISO (PMID:24475098) RGD PMID:24475098 NCBI chr 6:136,589,623...136,593,278
Ensembl chr 6:130,768,141...130,772,970
JBrowse link
G Bag6 BAG cochaperone 6 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:18678708)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:18678708 GO_REF:0000024 GO_REF:0000107 NCBI chr20:3,680,607...3,693,329
Ensembl chr20:3,675,938...3,688,657
JBrowse link
G Camlg calcium modulating ligand involved_in ISO UniProtKB:Q9H9V4 (PMID:20553626) RGD PMID:20553626 NCBI chr17:8,997,868...9,009,140
Ensembl chr17:8,992,696...9,003,552
JBrowse link
G Ccar2 cell cycle and apoptosis regulator 2 involved_in ISO (PMID:23398316) RGD PMID:23398316 NCBI chr15:45,212,797...45,228,001
Ensembl chr15:45,212,803...45,227,636
JBrowse link
G Clec16a C-type lectin domain containing 16A acts_upstream_of_or_within ISO MGI:5648633 (PMID:24949970) RGD PMID:24949970 NCBI chr10:5,434,725...5,631,246
Ensembl chr10:4,928,030...5,123,578
JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 involved_in ISO UniProtKB:P19784|UniProtKB:P25686|UniProtKB:P67870 (PMID:28031292) RGD PMID:28031292 NCBI chr 3:161,170,295...161,217,073
Ensembl chr 3:140,709,991...140,756,696
JBrowse link
G Csnk2a2 casein kinase 2 alpha 2 involved_in ISO UniProtKB:P25686|UniProtKB:P67870|UniProtKB:P68400 (PMID:28031292) RGD PMID:28031292 NCBI chr19:9,562,340...9,602,136
Ensembl chr19:9,556,260...9,596,080
JBrowse link
G Csnk2b casein kinase 2 beta involved_in ISO
IEA
(PMID:28031292)
GO_REF:0000107
RGD
Ensembl
PMID:28031292 GO_REF:0000107 NCBI chr20:3,704,833...3,709,999
Ensembl chr20:3,698,733...3,707,133
JBrowse link
G Ddrgk1 DDRGK domain containing 1 involved_in ISO (PMID:28263186) RGD PMID:28263186 NCBI chr 3:138,315,006...138,336,691
Ensembl chr 3:117,861,653...117,882,680
JBrowse link
G Eif3h eukaryotic translation initiation factor 3, subunit H involved_in ISO
IEA
(PMID:32269044)
GO_REF:0000107
RGD
Ensembl
PMID:32269044 GO_REF:0000107 NCBI chr 7:84,980,891...85,064,284
Ensembl chr 7:83,091,039...83,174,451
JBrowse link
G ENSRNOG00000069696 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 2:11,225,135...11,226,004 JBrowse link
G Fhit fragile histidine triad diadenosine triphosphatase involved_in ISO
IBA
IEA
ISS
(PMID:15313915)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024
RGD
GO_Central
Ensembl
UniProt
PMID:15313915 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr15:16,365,401...17,872,901
Ensembl chr15:13,934,995...15,442,340
JBrowse link
G Gipc1 GIPC PDZ domain containing family, member 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:11546783)
Ensembl
RGD
PMID:11546783 GO_REF:0000107 NCBI chr19:41,380,125...41,392,078
Ensembl chr19:24,453,123...24,486,997
JBrowse link
G Hfe homeostatic iron regulator involved_in ISO
IEA
(PMID:24904118)
GO_REF:0000107
GO:0010628 (PMID:24904118)
RGD
Ensembl
PMID:24904118 GO_REF:0000107 NCBI chr17:41,841,302...41,849,359
Ensembl chr17:41,413,451...41,421,502
JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:24613385)
UniProt
Ensembl
RGD
PMID:24613385 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:22,930,249...22,935,929
Ensembl chr 9:15,433,691...15,438,488
JBrowse link
G Klhl40 kelch-like family member 40 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:24960163)
GO_Central
RGD
PMID:24960163 GO_REF:0000033 NCBI chr 8:130,318,793...130,324,309
Ensembl chr 8:121,441,287...121,446,800
JBrowse link
G Map1a microtubule-associated protein 1A involved_in ISO (PMID:26609151) RGD PMID:26609151 NCBI chr 3:128,716,907...128,736,638
Ensembl chr 3:108,263,151...108,282,899
JBrowse link
G Mtm1 myotubularin 1 acts_upstream_of_or_within ISO MGI:2450997 (PMID:23695157) RGD PMID:23695157 NCBI chr 6:6,234,917...6,252,874
Ensembl chr 6:488,969...506,860
JBrowse link
G N4bp1 Nedd4 binding protein 1 involved_in IBA
ISO
GO_REF:0000033
(PMID:17592138)
GO_Central
RGD
PMID:17592138 GO_REF:0000033 NCBI chr19:36,396,082...36,446,835
Ensembl chr19:20,222,776...20,273,570
JBrowse link
G Nop53 NOP53 ribosome biogenesis factor involved_in ISO (PMID:22522597) RGD PMID:22522597 NCBI chr 1:85,757,271...85,765,089
Ensembl chr 1:76,629,069...76,636,902
JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase involved_in IEA
ISO
GO_REF:0000107
(PMID:26678539)
Ensembl
RGD
PMID:26678539 GO_REF:0000107 NCBI chr  X:70,811,317...70,856,123
Ensembl chr  X:66,771,349...66,816,146
JBrowse link
G Park7 Parkinsonism associated deglycase acts_upstream_of ISO (PMID:17015834) RGD PMID:17015834 NCBI chr 5:166,636,551...166,659,825
Ensembl chr 5:161,353,719...161,376,970
JBrowse link
G Pbk PDZ binding kinase acts_upstream_of_or_within ISO MGI:5293435 (PMID:21715333) RGD PMID:21715333 NCBI chr15:40,022,873...40,034,014
Ensembl chr15:40,023,002...40,034,014
JBrowse link
G Phf20l1 PHD finger protein 20-like 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:24492612)
UniProt
Ensembl
RGD
PMID:24492612 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:100,219,598...100,285,580
Ensembl chr 7:98,330,580...98,396,526
JBrowse link
G Rgs19 regulator of G-protein signaling 19 involved_in ISO (PMID:11546783) RGD PMID:11546783 NCBI chr 3:189,182,041...189,190,494
Ensembl chr 3:168,804,874...168,810,097
JBrowse link
G Rpl11 ribosomal protein L11 involved_in ISS
ISO
GO_REF:0000024
(PMID:21804542)
UniProt
RGD
PMID:21804542 GO_REF:0000024 NCBI chr 5:153,557,592...153,561,230
Ensembl chr 5:148,274,069...148,277,599
JBrowse link
G Rybp RING1 and YY1 binding protein involved_in ISO (PMID:27060496) RGD PMID:27060496 NCBI chr 4:134,432,663...134,484,732
Ensembl chr 4:132,876,361...132,928,316
JBrowse link
G Senp1 SUMO specific peptidase 1 acts_upstream_of_or_within ISO MGI:3818522 (PMID:17981124) RGD PMID:17981124 NCBI chr 7:131,042,237...131,105,826
Ensembl chr 7:129,165,774...129,221,598
JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:16611981)
Ensembl
RGD
PMID:16611981 GO_REF:0000107 NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
G Smarcc1 SWI/SNF related BAF chromatin remodeling complex subunit C1 acts_upstream_of_or_within ISO (PMID:22285184) RGD PMID:22285184 NCBI chr 8:118,986,917...119,093,161
Ensembl chr 8:110,111,122...110,214,720
JBrowse link
G Taf9 TATA-box binding protein associated factor 9 involved_in ISO
IEA
(PMID:11278372)
GO_REF:0000107
RGD
Ensembl
PMID:11278372 GO_REF:0000107 NCBI chr 2:33,528,388...33,532,395
Ensembl chr 2:31,794,142...31,798,769
JBrowse link
G Tlk2 tousled-like kinase 2 involved_in ISO (PMID:20016786) RGD PMID:20016786 NCBI chr10:90,154,449...90,248,562
Ensembl chr10:90,156,813...90,248,561
JBrowse link
G Trim39 tripartite motif-containing 39 involved_in ISO
IEA
IBA
ISS
(PMID:23213251)
GO_REF:0000107
GO_REF:0000033
GO_REF:0000024
RGD
Ensembl
GO_Central
UniProt
PMID:23213251 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr20:2,008,528...2,022,383
Ensembl chr20:1,983,533...2,020,117
JBrowse link
G Ttc36 tetratricopeptide repeat domain 36 acts_upstream_of_or_within ISO MGI:5588394 (PMID:31537781) RGD PMID:31537781 NCBI chr 8:54,009,522...54,013,129 JBrowse link
G Ubxn1 UBX domain protein 1 involved_in ISS
IBA
ISO
GO_REF:0000024
GO_REF:0000033
(PMID:20351172)
UniProt
GO_Central
RGD
PMID:20351172 GO_REF:0000024 GO_REF:0000033 NCBI chr 1:215,194,418...215,198,343
Ensembl chr 1:205,745,120...205,816,520
JBrowse link
G Uchl5 ubiquitin C-terminal hydrolase L5 involved_in ISO (PMID:23770237) RGD PMID:23770237 NCBI chr13:58,070,947...58,106,825
Ensembl chr13:55,520,729...55,556,502
JBrowse link
G Usp26 ubiquitin specific peptidase 26 involved_in ISO (PMID:28839133) RGD PMID:28839133 NCBI chr  X:136,237,504...136,284,646
Ensembl chr  X:131,319,194...131,363,970
JBrowse link
G Usp38 ubiquitin specific peptidase 38 involved_in ISO (PMID:34102342) RGD PMID:34102342 NCBI chr19:43,910,459...43,941,875
Ensembl chr19:27,006,046...27,037,437
JBrowse link
G Usp7 ubiquitin specific peptidase 7 involved_in ISO
IEA
(PMID:26678539)
GO_REF:0000107
RGD
Ensembl
PMID:26678539 GO_REF:0000107 NCBI chr10:7,335,508...7,432,018
Ensembl chr10:6,828,795...6,925,355
JBrowse link
G Usp9x ubiquitin specific peptidase 9, X-linked involved_in ISO (PMID:33378666) RGD PMID:33378666 NCBI chr  X:12,261,633...12,399,780
Ensembl chr  X:9,588,825...9,696,711
JBrowse link
G Wac WW domain containing adaptor with coiled-coil involved_in ISO (PMID:22354037) RGD PMID:22354037 NCBI chr17:60,617,702...60,677,771
Ensembl chr17:55,923,123...55,982,301
JBrowse link
negative regulation of protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrb1 adhesion G protein-coupled receptor B1 involved_in IEA
ISO
GO_REF:0000107
(PMID:25751059)
Ensembl
RGD
PMID:25751059 GO_REF:0000107 NCBI chr 7:108,293,681...108,365,892
Ensembl chr 7:106,404,958...106,476,902
JBrowse link
G Agap2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 acts_upstream_of_or_within ISO (PMID:18374643) RGD PMID:18374643 NCBI chr 7:64,782,618...64,799,624
Ensembl chr 7:62,897,282...62,914,295
JBrowse link
G Atraid all-trans retinoic acid-induced differentiation factor involved_in ISO (PMID:21723284) RGD PMID:21723284 NCBI chr 6:25,315,236...25,319,821 JBrowse link
G Azin1 antizyme inhibitor 1 involved_in IDA
IBA
ISS
ISO
IEA
downregulates antizyme degradation of ODC
GO_REF:0000033
GO_REF:0000024
(PMID:17900240)
GO_REF:0000107
GO_Central
UniProt
RGD
Ensembl
PMID:17900240 PMID:8631929 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107, RGD:633334 NCBI chr 7:69,654,773...69,681,578
Ensembl chr 7:69,654,663...69,681,578
JBrowse link
G Azin2 antizyme inhibitor 2 involved_in ISO
IBA
IEA
ISS
(PMID:17900240)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024
RGD
GO_Central
Ensembl
UniProt
PMID:17900240 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:141,281,310...141,310,415
Ensembl chr 5:141,281,249...141,310,397
JBrowse link
G Cdk2 cyclin dependent kinase 2 involved_in ISO (PMID:15750306) RGD PMID:15750306 NCBI chr 7:1,714,392...1,721,964
Ensembl chr 7:1,129,811...1,137,403
JBrowse link
G Cdk5rap3 CDK5 regulatory subunit associated protein 3 involved_in ISO
IEA
ISS
(PMID:16173922)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:16173922 GO_REF:0000024 GO_REF:0000107 NCBI chr10:81,894,393...81,903,581
Ensembl chr10:81,894,393...81,903,590
JBrowse link
G Cyp51 cytochrome P450, family 51 involved_in ISO (PMID:20876579) RGD PMID:20876579 NCBI chr 4:30,991,693...31,010,147
Ensembl chr 4:30,036,865...30,055,410
Ensembl chr 6:30,036,865...30,055,410
JBrowse link
G Dab2ip DAB2 interacting protein involved_in ISO
IEA
ISS
(PMID:19903888)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:19903888 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:39,312,745...39,483,730
Ensembl chr 3:18,915,290...19,086,280
JBrowse link
G Dedd death effector domain-containing acts_upstream_of_or_within ISO MGI:3707325 (PMID:21135503) RGD PMID:21135503 NCBI chr13:86,286,341...86,301,789
Ensembl chr13:83,756,108...83,769,332
JBrowse link
G Dysf dysferlin acts_upstream_of_or_within ISO (PMID:20724702) RGD PMID:20724702 NCBI chr 4:118,048,460...118,248,273
Ensembl chr 4:116,490,616...116,690,709
JBrowse link
G Egfr epidermal growth factor receptor involved_in ISO (PMID:17115032) RGD PMID:17115032 NCBI chr14:95,378,626...95,551,358
Ensembl chr14:91,177,067...91,344,382
JBrowse link
G Fbxo43 F-box protein 43 acts_upstream_of_or_within ISO (PMID:16966421) RGD PMID:16966421 NCBI chr 7:69,218,298...69,231,873
Ensembl chr 7:67,333,162...67,346,751
JBrowse link
G Flna filamin A involved_in ISO (PMID:18322202) RGD PMID:18322202 NCBI chr  X:157,159,051...157,185,559
Ensembl chr  X:152,007,758...152,031,052
JBrowse link
G Fmn2 formin 2 involved_in ISO (PMID:23375502) RGD PMID:23375502 NCBI chr13:88,986,863...89,303,789
Ensembl chr13:86,453,926...86,771,411
JBrowse link
G Fyn FYN proto-oncogene, Src family tyrosine kinase involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:16841086)
Ensembl
RGD
PMID:16841086 GO_REF:0000107 NCBI chr20:44,322,635...44,514,498
Ensembl chr20:42,766,369...42,959,911
JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:95822 (PMID:15317856)
Ensembl
RGD
PMID:15317856 GO_REF:0000107 NCBI chr10:6,136,458...6,560,003
Ensembl chr10:5,631,369...6,044,637
JBrowse link
G Grin2c glutamate ionotropic receptor NMDA type subunit 2C involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:95820 (PMID:15317856)
Ensembl
RGD
PMID:15317856 GO_REF:0000107 NCBI chr10:100,987,410...101,006,064
Ensembl chr10:100,488,431...100,506,427
JBrowse link
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase involved_in IEA
ISO
GO_REF:0000107
(PMID:20876579)
Ensembl
RGD
PMID:20876579 GO_REF:0000107 NCBI chr 2:29,732,163...29,754,276
Ensembl chr 2:27,997,525...28,019,703
JBrowse link
G Ins2 insulin 2 involved_in ISO (PMID:15185208) RGD PMID:15185208 NCBI chr 1:207,272,738...207,421,998
Ensembl chr 1:197,843,281...197,864,775
JBrowse link
G Irak3 interleukin-1 receptor-associated kinase 3 involved_in ISO (PMID:17379480), (PMID:18156187) RGD PMID:17379480 PMID:18156187 NCBI chr 7:57,538,522...57,600,166
Ensembl chr 7:55,653,962...55,713,121
JBrowse link
G Ldc1 leucine decarboxylase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:142,551,120...142,563,217
Ensembl chr 5:142,552,008...142,563,074
JBrowse link
G Mad2l1 mitotic arrest deficient 2 like 1 involved_in ISO (PMID:11459825) RGD PMID:11459825 NCBI chr 4:97,236,419...97,247,603
Ensembl chr 4:95,906,817...95,913,470
JBrowse link
G Mad2l2 mitotic arrest deficient 2 like 2 involved_in ISO
ISS
(PMID:11459826)
GO_REF:0000024
RGD
UniProt
PMID:11459826 GO_REF:0000024 NCBI chr 5:163,846,678...163,859,851
Ensembl chr 5:158,563,567...158,576,693
JBrowse link
G Mdm4 MDM4 regulator of p53 involved_in ISO
IEA
(PMID:10608892)
GO_REF:0000107
RGD
Ensembl
PMID:10608892 GO_REF:0000107 NCBI chr13:46,922,236...47,068,241
Ensembl chr13:44,406,213...44,474,226
JBrowse link
G Mycbp2 MYC binding protein 2 acts_upstream_of_or_within ISO (PMID:19398581) RGD PMID:19398581 NCBI chr15:86,352,061...86,590,126
Ensembl chr15:79,937,354...80,175,498
JBrowse link
G Nell1 neural EGFL like 1 involved_in ISO
ISS
(PMID:21723284)
GO_REF:0000024
RGD
UniProt
PMID:21723284 GO_REF:0000024 NCBI chr 1:99,709,305...100,573,872
Ensembl chr 1:99,709,793...100,573,860
JBrowse link
G Nos2 nitric oxide synthase 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:18003616)
Ensembl
RGD
PMID:18003616 GO_REF:0000107 NCBI chr10:64,313,335...64,349,221
Ensembl chr10:63,815,308...63,851,210
JBrowse link
G Nqo1 NAD(P)H quinone dehydrogenase 1 involved_in ISO
ISS
(PMID:15687255)
GO_REF:0000024
RGD
UniProt
PMID:15687255 GO_REF:0000024 NCBI chr19:52,205,374...52,220,267
Ensembl chr19:35,295,573...35,310,557
JBrowse link
G Nrg1 neuregulin 1 acts_upstream_of_or_within ISO (PMID:20448149) RGD PMID:20448149 NCBI chr16:65,954,084...67,007,484
Ensembl chr16:59,250,854...60,296,884
JBrowse link
G Park7 Parkinsonism associated deglycase involved_in ISO (PMID:24899725) RGD PMID:24899725 NCBI chr 5:166,636,551...166,659,825
Ensembl chr 5:161,353,719...161,376,970
JBrowse link
G Phb1 prohibitin 1 involved_in ISO (PMID:24732013) RGD PMID:24732013 NCBI chr10:81,102,043...81,114,815
Ensembl chr10:80,605,251...80,618,042
JBrowse link
G Phf20l1 PHD finger protein 20-like 1 involved_in ISO (PMID:29358331) RGD PMID:29358331 NCBI chr 7:100,219,598...100,285,580
Ensembl chr 7:98,330,580...98,396,526
JBrowse link
G Pin1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 involved_in ISO (PMID:11533658) RGD PMID:11533658 NCBI chr 8:27,465,538...27,477,016
Ensembl chr 8:19,189,373...19,200,785
JBrowse link
G Prkcg protein kinase C, gamma involved_in ISO (PMID:15808853) RGD PMID:15808853 NCBI chr 1:74,748,272...74,777,611
Ensembl chr 1:65,832,855...65,859,384
JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit acts_upstream_of_or_within ISO (PMID:15923614) RGD PMID:15923614 NCBI chr 1:212,354,336...212,364,815
Ensembl chr 1:202,924,945...202,935,484
JBrowse link
G Rgp1 RGP1 homolog, RAB6A GEF complex partner 1 involved_in ISO (PMID:23091056) RGD PMID:23091056 NCBI chr 5:57,834,467...57,843,087
Ensembl chr 5:57,834,629...57,843,086
JBrowse link
G Ric1 RIC1 homolog, RAB6A GEF complex partner 1 involved_in ISO (PMID:23091056) RGD PMID:23091056 NCBI chr 1:227,285,510...227,384,553
Ensembl chr 1:227,285,210...227,382,863
JBrowse link
G Rilp Rab interacting lysosomal protein involved_in ISO (PMID:17010938) RGD PMID:17010938 NCBI chr10:60,853,316...60,857,096
Ensembl chr10:60,355,278...60,358,781
JBrowse link
G Serpine2 serpin family E member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2387774 (PMID:15509762), (PMID:16319172)
Ensembl
RGD
PMID:15509762 PMID:16319172 GO_REF:0000107 NCBI chr 9:88,573,138...88,637,252
Ensembl chr 9:81,124,804...81,188,826
JBrowse link
G Sf3b3 splicing factor 3b, subunit 3 involved_in ISO (PMID:23951410) RGD PMID:23951410 NCBI chr19:38,782,749...38,820,271
Ensembl chr19:38,783,040...38,820,245
JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO MGI:1857796 (PMID:16611981) RGD PMID:16611981 NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
G Sirt2 sirtuin 2 involved_in ISO
IEA
ISS
(PMID:20543840)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:20543840 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:93,181,472...93,204,499
Ensembl chr 1:84,052,903...84,076,975
JBrowse link
G Smad3 SMAD family member 3 involved_in IDA
IMP
PMID:16690606
PMID:20097766
CACAO
BHF-UCL
PMID:16690606 PMID:20097766 RGD:15023472, RGD:11079190 NCBI chr 8:73,022,204...73,132,324
Ensembl chr 8:64,110,039...64,236,960
JBrowse link
G Smad4 SMAD family member 4 involved_in IMP PMID:20097766 BHF-UCL PMID:20097766 RGD:11079190 NCBI chr18:69,518,988...69,549,684
Ensembl chr18:67,243,742...67,274,438
JBrowse link
G Snx12 sorting nexin 12 involved_in ISO (PMID:22719997) RGD PMID:22719997 NCBI chr  X:66,226,995...66,356,945
Ensembl chr  X:66,227,053...66,356,950
JBrowse link
G Snx3 sorting nexin 3 involved_in ISO (PMID:18767904) RGD PMID:18767904 NCBI chr20:47,574,051...47,607,577
Ensembl chr20:45,992,720...46,025,379
JBrowse link
G Tmem132a transmembrane protein 132A involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:5548753 (PMID:33324648)
Ensembl
RGD
PMID:33324648 GO_REF:0000107 NCBI chr 1:216,931,962...216,943,644
Ensembl chr 1:207,507,077...207,518,758
JBrowse link
G Trim40 tripartite motif-containing 40 involved_in ISO (PMID:21474709) RGD PMID:21474709 NCBI chr20:1,680,554...1,691,123
Ensembl chr20:1,676,270...1,685,214
JBrowse link
negative regulation of receptor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mtmr2 myotubularin related protein 2 involved_in IMP PMID:20410104 BHF-UCL PMID:20410104 RGD:8553482 NCBI chr 8:18,899,303...18,949,767
Ensembl chr 8:10,617,993...10,668,172
JBrowse link
negative regulation of RNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nrde2 NRDE-2, necessary for RNA interference, domain containing involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:119,405,103...119,446,861
Ensembl chr 6:119,404,334...119,448,915
JBrowse link
negative regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pabpn1l PABPN1 like acts_upstream_of_or_within ISO (PMID:32558204) RGD PMID:32558204 NCBI chr19:67,578,494...67,581,938
Ensembl chr19:50,669,967...50,673,366
JBrowse link
G Styx serine/threonine/tyrosine interacting protein involved_in ISO
IBA
(PMID:28007894)
GO_REF:0000033
RGD
GO_Central
PMID:28007894 GO_REF:0000033 NCBI chr15:21,043,738...21,075,515
Ensembl chr15:18,564,633...18,593,524
JBrowse link
negative regulation of triglyceride catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoc3 apolipoprotein C3 involved_in ISO
IBA
(PMID:18635818), (PMID:3973011)
GO_REF:0000033
RGD
GO_Central
PMID:3973011 PMID:18635818 GO_REF:0000033 NCBI chr 8:55,428,172...55,430,352
Ensembl chr 8:46,531,478...46,533,583
JBrowse link
G Gpld1 glycosylphosphatidylinositol specific phospholipase D1 involved_in ISS
ISO
GO_REF:0000024
(PMID:16219662)
UniProt
RGD
PMID:16219662 GO_REF:0000024 NCBI chr17:40,512,659...40,560,483
Ensembl chr17:40,084,617...40,126,939
JBrowse link
G Pik3cg phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma IMP RGD PMID:21435395 RGD:6482711 NCBI chr 6:54,494,247...54,529,563
Ensembl chr 6:48,766,864...48,802,043
JBrowse link
G Plin5 perilipin 5 involved_in ISS
ISO
GO_REF:0000024
(PMID:22675471), (PMID:23345411)
UniProt
RGD
PMID:22675471 PMID:23345411 GO_REF:0000024 NCBI chr 9:1,026,910...1,033,352
Ensembl chr 9:939,747...946,120
JBrowse link
G Sorl1 sortilin related receptor 1 involved_in ISO (PMID:27322061) RGD PMID:27322061 NCBI chr 8:51,238,713...51,401,458
Ensembl chr 8:42,341,704...42,504,513
JBrowse link
negative regulation of type 2 mitophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Htra2 HtrA serine peptidase 2 involved_in ISO (PMID:24709290) RGD PMID:24709290 NCBI chr 4:117,114,631...117,117,793
Ensembl chr 4:115,556,916...115,560,095
JBrowse link
G Vps13c vacuolar protein sorting 13 homolog C involved_in ISO
ISS
(PMID:26942284)
GO_REF:0000024
RGD
ParkinsonsUK-UCL
PMID:26942284 GO_REF:0000024 NCBI chr 8:77,359,499...77,533,009
Ensembl chr 8:68,478,395...68,651,895
JBrowse link
negative regulation of ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anks1a ankyrin repeat and sterile alpha motif domain containing 1A acts_upstream_of_or_within ISO (PMID:20100865) RGD PMID:20100865 NCBI chr20:5,965,421...6,118,875
Ensembl chr20:5,963,678...6,117,148
JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A involved_in
acts_upstream_of_or_within
ISO (PMID:16173922)
(PMID:23277542)
(PMID:18560357)
RGD PMID:16173922 PMID:18560357 PMID:23277542 NCBI chr 5:109,100,763...109,114,448
Ensembl chr 5:103,984,949...104,003,149
JBrowse link
G Hfe homeostatic iron regulator involved_in ISO (PMID:24904118) RGD PMID:24904118 NCBI chr17:41,841,302...41,849,359
Ensembl chr17:41,413,451...41,421,502
JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 involved_in ISO (PMID:21628596) RGD PMID:21628596 NCBI chr 4:68,399,358...68,586,404
Ensembl chr 4:67,440,501...67,619,223
JBrowse link
G Pdcl3 phosducin-like 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23792958)
GO_REF:0000107
RGD
Ensembl
PMID:23792958 GO_REF:0000107 NCBI chr 9:41,234,322...41,243,769
Ensembl chr 9:41,234,234...41,243,735
JBrowse link
G Pml PML nuclear body scaffold involved_in ISO (PMID:15195100) RGD PMID:15195100 NCBI chr 8:67,523,164...67,557,801
Ensembl chr 8:58,628,837...58,658,971
JBrowse link
G Prmt6 protein arginine methyltransferase 6 involved_in ISO (PMID:26070566) RGD PMID:26070566 NCBI chr 2:200,615,780...200,620,790
Ensembl chr 2:197,927,220...197,933,648
JBrowse link
G Psen1 presenilin 1 involved_in ISO (PMID:20208556) RGD PMID:20208556 NCBI chr 6:109,054,160...109,106,191
Ensembl chr 6:103,323,120...103,371,650
JBrowse link
G Psen2 presenilin 2 involved_in ISO (PMID:20208556) RGD PMID:20208556 NCBI chr13:94,499,451...94,528,419
Ensembl chr13:91,967,983...91,993,174
JBrowse link
G Qrich2 glutamine rich 2 involved_in ISO (PMID:30683861) RGD PMID:30683861 NCBI chr10:102,168,103...102,196,497
Ensembl chr10:101,669,224...101,697,656
JBrowse link
G Rpl11 ribosomal protein L11 involved_in ISO (PMID:18560357) RGD PMID:18560357 NCBI chr 5:153,557,592...153,561,230
Ensembl chr 5:148,274,069...148,277,599
JBrowse link
G Rpl23 ribosomal protein L23 involved_in ISO (PMID:15314173) RGD PMID:15314173 NCBI chr10:83,268,223...83,272,184
Ensembl chr10:82,771,538...82,775,870
JBrowse link
G Rpl5 ribosomal protein L5 involved_in ISO (PMID:18560357) RGD PMID:18560357 NCBI chr14:1,988,792...1,995,236
Ensembl chr14:1,843,770...1,850,290
JBrowse link
G Rps7 ribosomal protein S7 involved_in ISO (PMID:17310983) RGD PMID:17310983 NCBI chr 6:50,994,581...50,999,447
Ensembl chr 6:45,223,980...45,271,145
Ensembl chr 5:45,223,980...45,271,145
JBrowse link
G Sgta small glutamine rich tetratricopeptide repeat co-chaperone alpha involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:23129660)
UniProt
Ensembl
RGD
PMID:23129660 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:9,304,381...9,321,157
Ensembl chr 7:8,653,778...8,670,458
JBrowse link
G Sufu SUFU negative regulator of hedgehog signaling acts_upstream_of_or_within ISO MGI:1343085 (PMID:19684112) RGD PMID:19684112 NCBI chr 1:255,199,108...255,296,983
Ensembl chr 1:245,257,768...245,355,577
JBrowse link
G Svip small VCP interacting protein involved_in IDA PMID:17000876 ParkinsonsUK-UCL PMID:17000876 RGD:10047192 NCBI chr 1:101,587,128...101,592,818
Ensembl chr 1:101,587,128...101,593,116
JBrowse link
G Taf1 TATA-box binding protein associated factor 1 involved_in ISO (PMID:17237821) RGD PMID:17237821 NCBI chr  X:70,680,901...70,756,535
Ensembl chr  X:66,640,982...66,716,543
JBrowse link
G Trim39 tripartite motif-containing 39 involved_in ISO (PMID:19100260) RGD PMID:19100260 NCBI chr20:2,008,528...2,022,383
Ensembl chr20:1,983,533...2,020,117
JBrowse link
G Usp14 ubiquitin specific peptidase 14 involved_in ISO (PMID:19135427) RGD PMID:19135427 NCBI chr18:1,018,111...1,057,727
Ensembl chr18:1,019,400...1,057,519
JBrowse link
G Usp5 ubiquitin specific peptidase 5 involved_in ISO (PMID:24424410) RGD PMID:24424410 NCBI chr 4:159,305,927...159,321,345
Ensembl chr 4:157,619,643...157,634,711
JBrowse link
G Wnt1 Wnt family member 1 acts_upstream_of_or_within ISO (PMID:16601693) RGD PMID:16601693 NCBI chr 7:131,817,558...131,821,605
Ensembl chr 7:129,938,604...129,942,651
JBrowse link
nuclear polyadenylation-dependent mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 involved_in ISO (PMID:16934922) RGD PMID:16934922 NCBI chr14:107,078,486...107,109,628
Ensembl chr14:102,877,553...102,908,696
JBrowse link
nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnot1 CCR4-NOT transcription complex, subunit 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:9,255,190...9,346,574
Ensembl chr19:9,255,194...9,346,574
JBrowse link
G Cnot6l CCR4-NOT transcription complex, subunit 6-like acts_upstream_of_or_within ISO (PMID:17452450) RGD PMID:17452450 NCBI chr14:13,410,499...13,502,511
Ensembl chr14:13,411,281...13,498,203
JBrowse link
G Pabpn1l PABPN1 like involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:6509577 (PMID:32558204)
GO_Central
RGD
PMID:32558204 GO_REF:0000033 NCBI chr19:67,578,494...67,581,938
Ensembl chr19:50,669,967...50,673,366
JBrowse link
G Pde12 phosphodiesterase 12 involved_in ISO
IBA
IEA
(PMID:21245038)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:21245038 GO_REF:0000033 GO_REF:0000107 NCBI chr16:1,926,807...1,932,383
Ensembl chr16:1,915,386...1,925,887
JBrowse link
G Rc3h1 ring finger and CCCH-type domains 1 involved_in ISO
IBA
(PMID:26000482)
GO_REF:0000033
RGD
GO_Central
PMID:26000482 GO_REF:0000033 NCBI chr13:75,707,098...75,779,114
Ensembl chr13:73,173,946...73,238,839
JBrowse link
G Rc3h2 ring finger and CCCH-type domains 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:41,531,319...41,596,496
Ensembl chr 3:21,110,679...21,179,933
JBrowse link
G Zfp36 zinc finger protein 36 involved_in
acts_upstream_of_or_within
ISO (PMID:23644599)
(PMID:15814898)
RGD PMID:15814898 PMID:23644599 NCBI chr 1:92,796,628...92,799,108
Ensembl chr 1:83,669,084...83,671,564
JBrowse link
G Zfp36l1 zinc finger protein 36, C3H type-like 1 acts_upstream_of_or_within ISO (PMID:15814898) RGD PMID:15814898 NCBI chr 6:104,663,396...104,669,815
Ensembl chr 6:98,930,718...98,935,748
JBrowse link
G Zfp36l2 zinc finger protein 36, C3H type-like 2 acts_upstream_of_or_within ISO (PMID:15814898) RGD PMID:15814898 NCBI chr 6:16,242,622...16,246,662
Ensembl chr 6:10,490,032...10,494,064
JBrowse link
nuclear-transcribed mRNA poly(A) tail shortening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnot2 CCR4-NOT transcription complex, subunit 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:54,016,447...54,117,511
Ensembl chr 7:52,130,441...52,223,575
JBrowse link
G Cnot3 CCR4-NOT transcription complex, subunit 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:74,471,284...74,487,527
Ensembl chr 1:65,555,924...65,572,167
JBrowse link
G Cnot6 CCR4-NOT transcription complex, subunit 6 involved_in ISO
IEA
ISS
(PMID:20595389)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:20595389 GO_REF:0000024 GO_REF:0000107 NCBI chr10:33,978,785...34,031,025
Ensembl chr10:33,980,831...34,031,025
JBrowse link
G Cnot7 CCR4-NOT transcription complex, subunit 7 acts_upstream_of_or_within
involved_in
ISO (PMID:18625844)
(PMID:21336257)
RGD PMID:18625844 PMID:21336257 NCBI chr16:58,478,882...58,498,046
Ensembl chr16:51,775,412...51,794,576
JBrowse link
G Mlh1 mutL homolog 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857946 (PMID:11337385)
Ensembl
RGD
PMID:11337385 GO_REF:0000107 NCBI chr 8:120,074,871...120,112,109
Ensembl chr 8:111,196,468...111,233,617
JBrowse link
G Pan2 poly(A) specific ribonuclease subunit PAN2 involved_in IEA
IBA
GO_REF:0000104
GO_REF:0000033
UniProt
GO_Central
GO_REF:0000033 GO_REF:0000104 NCBI chr 7:729,146...747,744
Ensembl chr 7:729,562...747,744
JBrowse link
G Pan3 poly(A) specific ribonuclease subunit PAN3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:7,476,707...7,595,384
Ensembl chr12:7,476,697...7,599,204
JBrowse link
G Parn poly(A)-specific ribonuclease acts_upstream_of_or_within
involved_in
ISO
IBA
(PMID:18337750)
GO_REF:0000033
RGD
GO_Central
PMID:18337750 GO_REF:0000033 NCBI chr10:1,410,636...1,548,573
Ensembl chr10:1,410,642...1,548,560
JBrowse link
G Pnldc1 PARN like ribonuclease domain containing exonuclease 1 involved_in ISO
IBA
(PMID:27515512)
GO_REF:0000033
RGD
GO_Central
PMID:27515512 GO_REF:0000033 NCBI chr 1:50,390,884...50,409,457
Ensembl chr 1:47,843,224...47,861,674
JBrowse link
G Samd4a sterile alpha motif domain containing 4A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:22,616,200...22,831,872
Ensembl chr15:20,134,377...20,348,380
JBrowse link
G Samd4b sterile alpha motif domain containing 4B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:83,689,413...83,728,652
Ensembl chr 1:83,689,413...83,713,853
JBrowse link
G Zfp36 zinc finger protein 36 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:15814898)
(PMID:23644599)
Ensembl
RGD
PMID:15814898 PMID:23644599 GO_REF:0000107 NCBI chr 1:92,796,628...92,799,108
Ensembl chr 1:83,669,084...83,671,564
JBrowse link
piRNA-mediated gene silencing by mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnot7 CCR4-NOT transcription complex, subunit 7 involved_in ISO UniProtKB:Q9JMB7 (PMID:24787618) RGD PMID:24787618 NCBI chr16:58,478,882...58,498,046
Ensembl chr16:51,775,412...51,794,576
JBrowse link
G Gtsf1 gametocyte specific factor 1 involved_in ISO (PMID:29437694) RGD PMID:29437694 NCBI chr 7:136,417,793...136,436,849
Ensembl chr 7:134,539,329...134,557,424
JBrowse link
G Piwil1 piwi-like RNA-mediated gene silencing 1 involved_in ISO (PMID:24787618), (PMID:25582079) RGD PMID:24787618 PMID:25582079 NCBI chr12:33,585,747...33,606,715
Ensembl chr12:27,949,744...27,970,580
JBrowse link
G Piwil2 piwi-like RNA-mediated gene silencing 2 involved_in ISO (PMID:29437694) RGD PMID:29437694 NCBI chr15:51,841,104...51,907,729
Ensembl chr15:45,431,703...45,497,702
JBrowse link
G Piwil4 piwi-like RNA-mediated gene silencing 4 involved_in ISO (PMID:29437694) RGD PMID:29437694 NCBI chr 8:19,817,985...19,861,327
Ensembl chr 8:11,536,520...11,579,761
JBrowse link
polyuridylation-dependent mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dis3l2 DIS3-like 3'-5' exoribonuclease 2 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 9:94,802,056...95,184,523
Ensembl chr 9:87,356,457...87,736,616
JBrowse link
G Tut4 terminal uridylyl transferase 4 involved_in ISO (PMID:28792939) RGD PMID:28792939 NCBI chr 5:128,354,975...128,535,288
Ensembl chr 5:123,203,003...123,306,465
JBrowse link
G Tut7 terminal uridylyl transferase 7 involved_in ISO (PMID:28792939) RGD PMID:28792939 NCBI chr17:4,854,553...4,908,758
Ensembl chr17:4,849,283...4,903,169
JBrowse link
positive regulation of 3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid5a AT-rich interaction domain 5A involved_in ISO (PMID:32209697) RGD PMID:32209697 NCBI chr 9:46,030,513...46,058,729
Ensembl chr 9:38,534,590...38,547,597
JBrowse link
G Elavl4 ELAV like RNA binding protein 4 involved_in ISO
ISS
(PMID:18218628)
GO_REF:0000024
RGD
UniProt
PMID:18218628 GO_REF:0000024 NCBI chr 5:130,285,418...130,429,106
Ensembl chr 5:125,056,848...125,200,446
JBrowse link
G Larp4b La ribonucleoprotein 4B involved_in ISO (PMID:26001795) RGD PMID:26001795 NCBI chr17:61,138,663...61,217,423
Ensembl chr17:61,138,709...61,187,960
JBrowse link
G Qki QKI, KH domain containing RNA binding involved_in ISO (PMID:28188285) RGD PMID:28188285 NCBI chr 1:52,935,357...53,047,338
Ensembl chr 1:50,387,698...50,498,831
JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO (PMID:24356969) RGD PMID:24356969 NCBI chr17:18,481,893...18,494,440
Ensembl chr17:18,275,688...18,288,102
JBrowse link
G Tent4a terminal nucleotidyltransferase 4A involved_in ISO (PMID:30026317) RGD PMID:30026317 NCBI chr 1:33,765,949...33,799,405
Ensembl chr 1:33,765,672...33,799,433
JBrowse link
G Tent4b terminal nucleotidyltransferase 4B involved_in ISO (PMID:30026317) RGD PMID:30026317 NCBI chr19:18,807,616...18,868,969
Ensembl chr19:18,807,525...18,869,537
JBrowse link
positive regulation of aggrephagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag3 BAG cochaperone 3 involved_in ISO (PMID:18006506) RGD PMID:18006506 NCBI chr 1:192,533,460...192,557,281
Ensembl chr 1:183,102,871...183,126,858
JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:22017874)
UniProt
RGD
PMID:22017874 GO_REF:0000024 NCBI chr 3:161,170,295...161,217,073
Ensembl chr 3:140,709,991...140,756,696
JBrowse link
G Hspb8 heat shock protein family B (small) member 8 involved_in ISO (PMID:18006506) RGD PMID:18006506 NCBI chr12:40,176,405...40,205,002
Ensembl chr12:40,176,532...40,191,185
JBrowse link
G Htt huntingtin involved_in IEA
ISO
GO_REF:0000107
(PMID:25686248)
Ensembl
RGD
PMID:25686248 GO_REF:0000107 NCBI chr14:80,070,456...80,219,668
Ensembl chr14:75,845,836...75,995,070
JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in IEA
ISO
GO_REF:0000107
(PMID:31857589)
Ensembl
RGD
PMID:31857589 GO_REF:0000107 NCBI chr 1:212,325,089...212,332,640
Ensembl chr 1:202,895,751...202,903,458
JBrowse link
G Zdhhc19 zinc finger DHHC-type palmitoyltransferase 19 involved_in ISO (PMID:37802024) RGD PMID:37802024 NCBI chr11:68,277,847...68,289,110
Ensembl chr11:68,277,848...68,288,954
JBrowse link
positive regulation of anaphase-promoting complex-dependent catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc20 cell division cycle 20 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:131,966,203...131,970,406
Ensembl chr 5:131,966,215...131,970,512
JBrowse link
G Fzr1 fizzy and cell division cycle 20 related 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:8,332,029...8,343,953
Ensembl chr 7:8,332,029...8,343,952
JBrowse link
positive regulation of apoptotic DNA fragmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bax BCL2 associated X, apoptosis regulator involved_in ISO (PMID:11350920) RGD PMID:11350920 NCBI chr 1:105,076,472...105,081,906
Ensembl chr 1:95,938,808...95,945,368
JBrowse link
G Endog endonuclease G IMP RGD PMID:16407272 RGD:9685355 NCBI chr 3:13,449,113...13,451,715
Ensembl chr 3:13,449,086...13,451,932
JBrowse link
G Gata5 GATA binding protein 5 IMP RGD PMID:25726415 RGD:155260369 NCBI chr 3:187,796,140...187,804,327
Ensembl chr 3:167,418,565...167,426,751
JBrowse link
G Hsf1 heat shock transcription factor 1 IMP RGD PMID:21192280 RGD:10403035 NCBI chr 7:110,076,710...110,103,665
Ensembl chr 7:108,196,056...108,223,011
JBrowse link
G Igfbp3 insulin-like growth factor binding protein 3 IMP RGD PMID:15125883 RGD:10402776 NCBI chr14:86,270,208...86,277,944
Ensembl chr14:82,056,347...82,064,083
JBrowse link
G Il6 interleukin 6 involved_in ISO (PMID:28433754) RGD PMID:28433754 NCBI chr 4:5,889,999...5,894,575
Ensembl chr 4:5,213,394...5,219,178
JBrowse link
positive regulation of autophagosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07028769.1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107
G Atg2a autophagy related 2A involved_in ISO (PMID:30952800), (PMID:31271352) RGD PMID:30952800 PMID:31271352 NCBI chr 1:203,542,559...203,562,242
Ensembl chr 1:203,542,559...203,562,242
JBrowse link
G Atg7 autophagy related 7 IMP RGD PMID:33372336 RGD:407571673 NCBI chr 4:149,390,000...149,597,534
Ensembl chr 4:147,718,752...147,925,593
JBrowse link
G Becn1 beclin 1 IMP RGD