ONTOLOGY REPORT - ANNOTATIONS |
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Term: | axis specification |
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Accession: | GO:0009798
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browse the term
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Definition: | The establishment, maintenance and elaboration of a pattern along a line or around a point. |
Synonyms: | related_synonym: | axis determination |
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Apc |
APC regulator of WNT signaling pathway |
acts_upstream_of_or_within |
ISO |
MGI:2449944 (PMID:12645927) |
RGD |
PMID:12645927 |
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NCBI chr18:26,138,382...26,196,021
Ensembl chr18:25,864,222...25,922,696
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Ripply2 |
ripply transcriptional repressor 2 |
acts_upstream_of_or_within |
ISO |
MGI:3513254 (PMID:17531978) |
RGD |
PMID:17531978 |
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NCBI chr 8:87,974,444...87,979,002
Ensembl chr 8:87,974,776...87,978,969
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Wnt6 |
Wnt family member 6 |
acts_upstream_of_or_within |
ISO |
(PMID:11948913) |
RGD |
PMID:11948913 |
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NCBI chr 9:76,329,882...76,343,523
Ensembl chr 9:76,329,882...76,343,523
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Aurka |
aurora kinase A |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:3836420 (PMID:22939930) |
Ensembl RGD |
PMID:22939930 |
GO_REF:0000107 |
NCBI chr 3:181,546,742...181,562,890
Ensembl chr 3:161,128,313...161,144,390
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Bmp4 |
bone morphogenetic protein 4 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:104903 (PMID:10964473) |
Ensembl RGD |
PMID:10964473 |
GO_REF:0000107 |
NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306
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Cdx2 |
caudal type homeo box 2 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr12:12,762,769...12,769,246
Ensembl chr12:7,726,798...7,733,142
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Cdx4 |
caudal type homeo box 4 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr X:72,392,653...72,401,239
Ensembl chr X:68,326,874...68,335,461
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Cer1 |
cerberus 1, DAN family BMP antagonist |
acts_upstream_of_or_within |
ISO |
MGI:107405|MGI:98658 (PMID:15004567), (PMID:18241853) |
RGD |
PMID:15004567 PMID:18241853 |
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NCBI chr 5:97,306,427...97,309,783
Ensembl chr 5:97,306,431...97,309,783
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Cripto |
cripto, EGF-CFC family member |
acts_upstream_of_or_within |
ISO |
MGI:1201414 (PMID:18241853) |
RGD |
PMID:18241853 |
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NCBI chr 8:119,803,182...119,808,714
Ensembl chr 8:110,925,024...110,930,308
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Ctnnb1 |
catenin beta 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2148590 (PMID:10662781) |
Ensembl RGD |
PMID:10662781 |
GO_REF:0000107 |
NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:120,639,995...120,667,111
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Ddit3 |
DNA-damage inducible transcript 3 |
involved_in |
ISO |
(PMID:16434966) |
RGD |
PMID:16434966 |
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NCBI chr 7:65,001,695...65,006,517
Ensembl chr 7:63,116,380...63,121,201
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Gpc3 |
glypican 3 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:88180 (PMID:10964473) |
Ensembl RGD |
PMID:10964473 |
GO_REF:0000107 |
NCBI chr X:136,789,770...137,157,598
Ensembl chr X:131,868,990...132,236,798
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Hey1 |
hes-related family bHLH transcription factor with YRPW motif 1 |
acts_upstream_of_or_within |
ISO |
MGI:1341884 (PMID:15680351) |
RGD |
PMID:15680351 |
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NCBI chr 2:95,003,935...95,006,457
Ensembl chr 2:93,095,498...93,100,312
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Hey2 |
hes-related family bHLH transcription factor with YRPW motif 2 |
acts_upstream_of_or_within |
ISO |
MGI:1341800 (PMID:15680351) |
RGD |
PMID:15680351 |
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NCBI chr 1:28,641,100...28,651,187
Ensembl chr 1:26,822,131...26,832,218
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Ldb1 |
LIM domain binding 1 |
acts_upstream_of_or_within |
ISO |
MGI:2449177 (PMID:12490556) |
RGD |
PMID:12490556 |
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NCBI chr 1:254,813,161...254,838,931
Ensembl chr 1:244,877,173...244,890,013
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Lefty1 |
left right determination factor 1 |
acts_upstream_of_or_within involved_in |
ISO IBA |
MGI:1201414 (PMID:15004567) GO_REF:0000033 |
RGD GO_Central |
PMID:15004567 |
GO_REF:0000033 |
NCBI chr13:92,649,226...92,659,722
Ensembl chr13:92,656,323...92,659,720
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Lefty2 |
Left-right determination factor 2 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr13:92,610,185...92,620,918
Ensembl chr13:92,615,360...92,619,880
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Lhx1 |
LIM homeobox 1 |
involved_in acts_upstream_of_or_within |
ISS ISO |
GO_REF:0000024 MGI:2443342 (PMID:10529425) |
UniProt RGD |
PMID:10529425 |
GO_REF:0000024 |
NCBI chr10:69,894,288...69,901,076
Ensembl chr10:69,396,829...69,403,617
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Nodal |
nodal growth differentiation factor |
acts_upstream_of_or_within |
ISO |
MGI:2158732 (PMID:11311163) |
RGD |
PMID:11311163 |
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NCBI chr20:29,911,258...29,919,659
Ensembl chr20:29,368,436...29,376,837
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Pgap1 |
post-GPI attachment to proteins inositol deacylase 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1856621|MGI:99783 (PMID:10529425) |
Ensembl RGD |
PMID:10529425 |
GO_REF:0000107 |
NCBI chr 9:63,470,023...63,538,772
Ensembl chr 9:55,975,667...56,044,464
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Rnf2 |
ring finger protein 2 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2447529 (PMID:12183370) |
Ensembl RGD |
PMID:12183370 |
GO_REF:0000107 |
NCBI chr13:66,103,943...66,136,038
Ensembl chr13:63,554,862...63,583,099
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Six2 |
SIX homeobox 2 |
involved_in |
ISO |
(PMID:18321982) |
RGD |
PMID:18321982 |
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NCBI chr 6:14,727,756...14,734,219
Ensembl chr 6:8,967,157...8,981,193
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Ski |
Ski proto-oncogene |
acts_upstream_of_or_within |
ISO |
MGI:2177555 (PMID:11731796) |
RGD |
PMID:11731796 |
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NCBI chr 5:170,995,851...171,064,957
Ensembl chr 5:165,714,093...165,782,733
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Tbx18 |
T-box transcription factor 18 |
acts_upstream_of_or_within |
ISO |
MGI:3044914 (PMID:15155583) |
RGD |
PMID:15155583 |
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NCBI chr 8:97,531,960...97,559,988
Ensembl chr 8:88,652,054...88,680,058
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Wls |
Wnt ligand secretion mediator |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:19841259) |
UniProt RGD |
PMID:19841259 |
GO_REF:0000024 |
NCBI chr 2:251,590,653...251,705,991
Ensembl chr 2:248,931,903...249,048,298
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Wnt3 |
Wnt family member 3 |
acts_upstream_of_or_within |
ISO |
MGI:2450902 (PMID:18028899) |
RGD |
PMID:18028899 |
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NCBI chr10:89,180,224...89,224,195
Ensembl chr10:88,680,248...88,724,099
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Cripto |
cripto, EGF-CFC family member |
acts_upstream_of_or_within |
ISO |
MGI:1934206 (PMID:9790191) |
RGD |
PMID:9790191 |
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NCBI chr 8:119,803,182...119,808,714
Ensembl chr 8:110,925,024...110,930,308
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Frs2 |
fibroblast growth factor receptor substrate 2 |
acts_upstream_of_or_within |
ISO |
MGI:3580390 (PMID:15870281) |
RGD |
PMID:15870281 |
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NCBI chr 7:54,597,182...54,678,656
Ensembl chr 7:52,711,257...52,792,743
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Fzd5 |
frizzled class receptor 5 |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:9054360) |
Ensembl RGD |
PMID:9054360 |
GO_REF:0000107 |
NCBI chr 9:73,606,860...73,614,039
Ensembl chr 9:66,113,112...66,121,457
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Tasor |
transcription activation suppressor |
involved_in |
ISO |
(PMID:28839193) |
RGD |
PMID:28839193 |
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NCBI chr16:2,606,807...2,669,902
Ensembl chr16:2,603,936...2,667,292
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Tbx3 |
T-box transcription factor 3 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:9207801) |
UniProt RGD |
PMID:9207801 |
GO_REF:0000024 |
NCBI chr12:42,540,378...42,555,490
Ensembl chr12:36,881,445...36,893,708
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Tcf7l1 |
transcription factor 7 like 1 |
acts_upstream_of_or_within |
ISO |
MGI:3044616 (PMID:14668413) |
RGD |
PMID:14668413 |
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NCBI chr 4:106,238,892...106,404,012
Ensembl chr 4:104,680,739...104,845,287
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Wnt5a |
Wnt family member 5A |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:9054360) |
Ensembl RGD |
PMID:9054360 |
GO_REF:0000107 |
NCBI chr16:3,702,300...3,724,860
Ensembl chr16:3,697,032...3,718,234
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Axin1 |
axin 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (PMID:10330403) |
Ensembl RGD |
PMID:10330403 |
GO_REF:0000107 |
NCBI chr10:15,667,894...15,720,092
Ensembl chr10:15,163,684...15,215,615
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Axin2 |
axin 2 |
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IDA |
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RGD |
PMID:9566905 |
RGD:68736 |
NCBI chr10:93,893,830...93,927,042
Ensembl chr10:93,899,245...93,926,231
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Bmpr1a |
bone morphogenetic protein receptor type 1A |
acts_upstream_of_or_within |
ISO |
MGI:2181295 (PMID:12923052) |
RGD |
PMID:12923052 |
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NCBI chr16:9,740,751...9,786,861
Ensembl chr16:9,736,630...9,780,616
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Ctnnb1 |
catenin beta 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2148594|MGI:2158470 (PMID:12923052) |
Ensembl RGD |
PMID:12923052 |
GO_REF:0000107 |
NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:120,639,995...120,667,111
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Lrp6 |
LDL receptor related protein 6 |
acts_upstream_of_or_within |
ISO |
MGI:2156191 (PMID:18985738) |
RGD |
PMID:18985738 |
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NCBI chr 4:168,997,937...169,131,716
Ensembl chr 4:167,270,353...167,400,497
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Mdfi |
MyoD family inhibitor |
involved_in |
ISO |
(PMID:11238923) |
RGD |
PMID:11238923 |
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NCBI chr 9:13,156,806...13,175,218
Ensembl chr 9:13,156,866...13,175,217
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Pax6 |
paired box 6 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1856155|MGI:1934347 (PMID:10588713) |
Ensembl RGD |
PMID:10588713 |
GO_REF:0000107 |
NCBI chr 3:112,590,034...112,611,771
Ensembl chr 3:92,135,637...92,157,014
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Senp2 |
SUMO specific peptidase 2 |
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IDA |
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RGD |
PMID:10944533 |
RGD:1299408 |
NCBI chr11:92,487,259...92,522,795
Ensembl chr11:78,981,432...79,018,238
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Sfrp1 |
secreted frizzled-related protein 1 |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:9192640) |
Ensembl RGD |
PMID:9192640 |
GO_REF:0000107 |
NCBI chr16:75,278,325...75,316,736
Ensembl chr16:68,575,763...68,614,286
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Vax2 |
ventral anterior homeobox 2 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2159246|MGI:2388160 (PMID:11830578), (PMID:11830579) |
Ensembl RGD |
PMID:11830578 PMID:11830579 |
GO_REF:0000107 |
NCBI chr 4:117,753,180...117,777,242
Ensembl chr 4:116,195,528...116,219,594
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Wnt3 |
Wnt family member 3 |
acts_upstream_of_or_within |
ISO |
MGI:2450902|MGI:2450903 (PMID:12569130) |
RGD |
PMID:12569130 |
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NCBI chr10:89,180,224...89,224,195
Ensembl chr10:88,680,248...88,724,099
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Chrd |
chordin |
involved_in |
ISO |
(PMID:11118896) |
RGD |
PMID:11118896 |
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NCBI chr11:93,676,400...93,685,584
Ensembl chr11:80,171,994...80,180,673
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Chrdl1 |
chordin-like 1 |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:11118896), (PMID:11401399) |
Ensembl RGD |
PMID:11118896 PMID:11401399 |
GO_REF:0000107 |
NCBI chr X:111,685,864...111,789,684
Ensembl chr X:106,889,125...106,992,921
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Cited1 |
Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 |
involved_in |
IDA |
PMID:15843474 |
UniProt |
PMID:15843474 |
RGD:8554075 |
NCBI chr X:71,390,328...71,395,023
Ensembl chr X:67,350,373...67,355,162
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Cobl |
cordon-bleu WH2 repeat protein |
involved_in |
ISO IEA |
(PMID:7586755) GO_REF:0000107 |
RGD Ensembl |
PMID:7586755 |
GO_REF:0000107 |
NCBI chr14:91,041,721...91,274,272
Ensembl chr14:86,828,139...87,060,800
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Ctnnb1 |
catenin beta 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (PMID:9230313) |
Ensembl RGD |
PMID:9230313 |
GO_REF:0000107 |
NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:120,639,995...120,667,111
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Frat1 |
FRAT regulator of WNT signaling pathway 1 |
acts_upstream_of_or_within |
ISO |
(PMID:10534617) |
RGD |
PMID:10534617 |
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NCBI chr 1:250,587,641...250,590,189
Ensembl chr 1:240,638,296...240,640,945
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Fzd5 |
frizzled class receptor 5 |
involved_in |
ISO |
(PMID:12121999) |
RGD |
PMID:12121999 |
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NCBI chr 9:73,606,860...73,614,039
Ensembl chr 9:66,113,112...66,121,457
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Stil |
STIL, centriolar assembly protein |
acts_upstream_of_or_within |
ISO |
MGI:2152962 (PMID:10385121) |
RGD |
PMID:10385121 |
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NCBI chr 5:133,757,598...133,810,493
Ensembl chr 5:128,520,953...128,573,730
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Wnt1 |
Wnt family member 1 |
involved_in |
ISO |
(PMID:2534596) |
RGD |
PMID:2534596 |
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NCBI chr 7:131,817,558...131,821,605
Ensembl chr 7:129,938,604...129,942,651
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Wnt7a |
Wnt family member 7A |
involved_in |
ISO |
(PMID:16826533) |
RGD |
PMID:16826533 |
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NCBI chr 4:125,420,276...125,466,149
Ensembl chr 4:123,863,108...123,908,981
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Ttc8 |
tetratricopeptide repeat domain 8 |
involved_in |
ISO |
(PMID:14520415) |
RGD |
PMID:14520415 |
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NCBI chr 6:118,198,186...118,252,422
Ensembl chr 6:118,198,201...118,252,418
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Irx4 |
iroquois homeobox 4 |
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IEP |
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RGD |
PMID:10882515 |
RGD:1582291 |
NCBI chr 1:31,859,101...31,868,089
Ensembl chr 1:30,030,561...30,039,549
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Wnt8a |
Wnt family member 8A |
acts_upstream_of_or_within |
ISO |
(PMID:16256739) |
RGD |
PMID:16256739 |
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NCBI chr18:26,411,833...26,417,426
Ensembl chr18:26,137,690...26,143,283
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Stc1 |
stanniocalcin 1 |
involved_in |
ISO |
(PMID:16377640) |
RGD |
PMID:16377640 |
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NCBI chr15:50,709,439...50,720,093
Ensembl chr15:44,299,621...44,310,264
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AABR07063281.1 |
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involved_in |
IEA |
GO_REF:0000107 |
Ensembl |
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GO_REF:0000107 |
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Arl13b |
ARF like GTPase 13B |
acts_upstream_of_or_within |
ISO |
MGI:3578151 (PMID:22554696) |
RGD |
PMID:22554696 |
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NCBI chr11:150,100...217,103
Ensembl chr11:150,955...217,197
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Cited2 |
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 |
involved_in |
ISO |
(PMID:15475956) |
RGD |
PMID:15475956 |
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NCBI chr 1:14,132,303...14,134,746
Ensembl chr 1:12,312,160...12,314,897
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Dll1 |
delta like canonical Notch ligand 1 |
involved_in |
ISO IEA |
(PMID:12730124) GO_REF:0000107 |
RGD Ensembl |
PMID:12730124 |
GO_REF:0000107 |
NCBI chr 1:64,985,161...64,993,274
Ensembl chr 1:56,312,066...56,320,179
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Epb41l5 |
erythrocyte membrane protein band 4.1 like 5 |
acts_upstream_of_or_within |
ISO |
MGI:3578147 (PMID:20678497) |
RGD |
PMID:20678497 |
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NCBI chr13:33,221,705...33,321,400
Ensembl chr13:30,669,764...30,768,360
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Ift172 |
intraflagellar transport 172 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2682066|MGI:3829198 (PMID:18930042), (PMID:22554696) |
Ensembl RGD |
PMID:18930042 PMID:22554696 |
GO_REF:0000107 |
NCBI chr 6:30,801,841...30,841,239
Ensembl chr 6:25,081,980...25,120,860
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Ift25 |
intraflagellar transport 25 |
acts_upstream_of_or_within |
ISO |
MGI:4432759|MGI:5426875 (PMID:22595669) |
RGD |
PMID:22595669 |
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NCBI chr 5:122,035,588...122,062,421
Ensembl chr 5:122,035,581...122,062,421
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Mns1 |
meiosis-specific nuclear structural 1 |
acts_upstream_of_or_within |
ISO |
MGI:5425368 (PMID:22396656) |
RGD |
PMID:22396656 |
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NCBI chr 8:82,029,587...82,050,276
Ensembl chr 8:73,148,877...73,176,925
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Notch1 |
notch receptor 1 |
involved_in |
ISO |
UniProtKB:O35516 (PMID:12730124) |
RGD |
PMID:12730124 |
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NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
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Notch2 |
notch receptor 2 |
involved_in |
IEA ISO |
GO_REF:0000107 UniProtKB:Q01705 (PMID:12730124) |
Ensembl RGD |
PMID:12730124 |
GO_REF:0000107 |
NCBI chr 2:188,299,336...188,432,823
Ensembl chr 2:185,610,589...185,744,088
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Pitx2 |
paired-like homeodomain 2 |
involved_in |
ISO |
(PMID:15475956) |
RGD |
PMID:15475956 |
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NCBI chr 2:220,391,417...220,411,588
Ensembl chr 2:217,717,693...217,737,293
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Pkd1l1 |
polycystin 1 like 1, transient receptor potential channel interacting |
involved_in |
ISO |
(PMID:21307093) |
RGD |
PMID:21307093 |
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NCBI chr14:87,766,745...87,888,647
Ensembl chr14:83,545,469...83,638,498
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G |
Smo |
smoothened, frizzled class receptor |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2137553 (PMID:9636176) |
Ensembl RGD |
PMID:9636176 |
GO_REF:0000107 |
NCBI chr 4:59,311,084...59,341,280
Ensembl chr 4:58,343,529...58,373,829
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G |
Zic3 |
Zic family member 3 |
involved_in |
ISO |
MGI:3698161 (PMID:17127413) |
RGD |
PMID:17127413 |
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NCBI chr X:141,159,623...141,165,587
Ensembl chr X:136,124,026...136,134,746
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Fgf10 |
fibroblast growth factor 10 |
acts_upstream_of_or_within |
ISO |
(PMID:15531758) |
RGD |
PMID:15531758 |
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NCBI chr 2:52,533,939...52,610,980
Ensembl chr 2:50,800,992...50,876,866
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C2cd3 |
C2 domain containing 3 centriole elongation regulator |
acts_upstream_of_or_within |
ISO |
(PMID:19004860) |
RGD |
PMID:19004860 |
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NCBI chr 1:164,127,304...164,225,088
Ensembl chr 1:154,715,310...154,812,520
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Ptch1 |
patched 1 |
involved_in |
ISO |
(PMID:11517919) |
RGD |
PMID:11517919 |
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NCBI chr17:1,542,705...1,607,730
Ensembl chr17:1,542,877...1,607,333
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G |
Wdr77 |
WD repeat domain 77 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr 2:196,123,882...196,133,853
Ensembl chr 2:193,435,468...193,445,520
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Pld6 |
phospholipase D family, member 6 |
involved_in |
ISO |
(PMID:21397848) |
RGD |
PMID:21397848 |
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NCBI chr10:45,078,081...45,080,732
Ensembl chr10:44,577,675...44,581,077
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G |
Tdrd1 |
tudor domain containing 1 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr 1:265,876,858...265,924,357
Ensembl chr 1:255,875,887...255,915,871
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G |
Tdrd5 |
tudor domain containing 5 |
involved_in |
IEA ISO ISS |
GO_REF:0000107 (PMID:21383078) GO_REF:0000024 |
Ensembl RGD UniProt |
PMID:21383078 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr13:68,394,180...68,447,745
Ensembl chr13:68,394,061...68,441,319
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G |
Tdrd6 |
tudor domain containing 6 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr 9:17,344,033...17,359,348
Ensembl chr 9:17,344,026...17,359,344
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G |
Tdrd7 |
tudor domain containing 7 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr 5:65,034,317...65,108,165
Ensembl chr 5:60,238,678...60,312,544
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G |
Tdrkh |
tudor and KH domain containing |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr 2:184,736,255...184,760,534
Ensembl chr 2:182,049,215...182,070,755
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G |
Shh |
sonic hedgehog signaling molecule |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (PMID:11044396) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:11044396 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:6,954,017...6,963,170
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G |
Wnt8a |
Wnt family member 8A |
acts_upstream_of_or_within |
ISO |
(PMID:16256739) |
RGD |
PMID:16256739 |
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NCBI chr18:26,411,833...26,417,426
Ensembl chr18:26,137,690...26,143,283
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G |
Nodal |
nodal growth differentiation factor |
acts_upstream_of_or_within |
ISO |
(PMID:14511481) |
RGD |
PMID:14511481 |
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NCBI chr20:29,911,258...29,919,659
Ensembl chr20:29,368,436...29,376,837
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G |
Wnt8a |
Wnt family member 8A |
acts_upstream_of_or_within |
ISO |
(PMID:16256739) |
RGD |
PMID:16256739 |
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NCBI chr18:26,411,833...26,417,426
Ensembl chr18:26,137,690...26,143,283
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G |
Ets2 |
ETS proto-oncogene 2, transcription factor |
acts_upstream_of_or_within |
ISO |
MGI:1891557 (PMID:23552073) |
RGD |
PMID:23552073 |
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NCBI chr11:48,491,057...48,507,843
Ensembl chr11:35,021,596...35,038,319
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G |
Foxa2 |
forkhead box A2 |
involved_in acts_upstream_of_or_within |
ISS ISO |
GO_REF:0000024 (PMID:11291865) MGI:1857725 (PMID:11291865) |
UniProt RGD |
PMID:11291865 |
GO_REF:0000024 |
NCBI chr 3:155,923,305...155,927,508
Ensembl chr 3:135,470,131...135,474,326
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G |
Gdf3 |
growth differentiation factor 3 |
acts_upstream_of_or_within |
ISO |
MGI:3612535 (PMID:16368929) |
RGD |
PMID:16368929 |
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NCBI chr 4:157,503,547...157,507,923
Ensembl chr 4:155,830,909...155,835,937
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G |
Hhex |
hematopoietically expressed homeobox |
acts_upstream_of_or_within |
ISO |
MGI:4999724|MGI:97359 (PMID:21445260) |
RGD |
PMID:21445260 |
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NCBI chr 1:244,602,945...244,608,532
Ensembl chr 1:235,190,455...235,196,042
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G |
Lhx1 |
LIM homeobox 1 |
involved_in acts_upstream_of_or_within |
ISS ISO |
GO_REF:0000024 MGI:1857502|MGI:1857848 (PMID:11291865) |
UniProt RGD |
PMID:11291865 |
GO_REF:0000024 |
NCBI chr10:69,894,288...69,901,076
Ensembl chr10:69,396,829...69,403,617
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G |
Lrp6 |
LDL receptor related protein 6 |
acts_upstream_of_or_within |
ISO |
MGI:98958 (PMID:19795512) |
RGD |
PMID:19795512 |
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NCBI chr 4:168,997,937...169,131,716
Ensembl chr 4:167,270,353...167,400,497
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G |
Nodal |
nodal growth differentiation factor |
acts_upstream_of_or_within |
ISO |
MGI:96086 (PMID:21445260) |
RGD |
PMID:21445260 |
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NCBI chr20:29,911,258...29,919,659
Ensembl chr20:29,368,436...29,376,837
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G |
Otx2 |
orthodenticle homeobox 2 |
involved_in acts_upstream_of_or_within |
ISO |
(PMID:11291865) MGI:1857502 (PMID:11291865) |
RGD |
PMID:11291865 |
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NCBI chr15:24,422,876...24,432,709
Ensembl chr15:21,943,191...21,953,416
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G |
Prickle1 |
prickle planar cell polarity protein 1 |
involved_in |
IEA ISO |
GO_REF:0000107 MGI:4356107 (PMID:19706528) |
Ensembl RGD |
PMID:19706528 |
GO_REF:0000107 |
NCBI chr 7:126,518,587...126,614,581
Ensembl chr 7:124,639,142...124,658,113
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G |
Srf |
serum response factor |
acts_upstream_of_or_within |
ISO |
MGI:2158696 (PMID:9799237) |
RGD |
PMID:9799237 |
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NCBI chr 9:21,924,050...21,933,338
Ensembl chr 9:14,426,472...14,435,733
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G |
Wnt5a |
Wnt family member 5A |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1298218 (PMID:19795512) |
Ensembl RGD |
PMID:19795512 |
GO_REF:0000107 |
NCBI chr16:3,702,300...3,724,860
Ensembl chr16:3,697,032...3,718,234
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G |
Zic3 |
Zic family member 3 |
involved_in |
ISO |
MGI:2180720 (PMID:16397896) |
RGD |
PMID:16397896 |
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NCBI chr X:141,159,623...141,165,587
Ensembl chr X:136,124,026...136,134,746
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G |
Six3 |
SIX homeobox 3 |
involved_in |
ISO |
(PMID:12163408) |
RGD |
PMID:12163408 |
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NCBI chr 6:14,791,937...14,796,365
Ensembl chr 6:9,036,434...9,053,301
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G |
Epb41l5 |
erythrocyte membrane protein band 4.1 like 5 |
acts_upstream_of_or_within |
ISO |
MGI:3822451 (PMID:18794329) |
RGD |
PMID:18794329 |
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NCBI chr13:33,221,705...33,321,400
Ensembl chr13:30,669,764...30,768,360
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G |
Foxa2 |
forkhead box A2 |
acts_upstream_of_or_within |
ISO |
MGI:1857725 (PMID:11291865) |
RGD |
PMID:11291865 |
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NCBI chr 3:155,923,305...155,927,508
Ensembl chr 3:135,470,131...135,474,326
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G |
Gdf3 |
growth differentiation factor 3 |
acts_upstream_of_or_within |
ISO |
MGI:3612535 (PMID:16368929) |
RGD |
PMID:16368929 |
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NCBI chr 4:157,503,547...157,507,923
Ensembl chr 4:155,830,909...155,835,937
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G |
Kdm6a |
lysine demethylase 6A |
acts_upstream_of_or_within |
ISO |
MGI:5448825 (PMID:22949634) |
RGD |
PMID:22949634 |
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NCBI chr X:6,920,374...7,060,027
Ensembl chr X:4,337,750...4,477,062
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G |
Lhx1 |
LIM homeobox 1 |
acts_upstream_of_or_within |
ISO |
MGI:1857502|MGI:1857848 (PMID:11291865) |
RGD |
PMID:11291865 |
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NCBI chr10:69,894,288...69,901,076
Ensembl chr10:69,396,829...69,403,617
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G |
Mesp1 |
mesoderm posterior bHLH transcription factor 1 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr 1:143,147,671...143,149,189
Ensembl chr 1:133,738,357...133,739,875
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G |
Mesp2 |
mesoderm posterior bHLH transcription factor 2 |
involved_in acts_upstream_of_or_within |
IBA ISO |
GO_REF:0000033 MGI:3580268 (PMID:20346937) |
GO_Central RGD |
PMID:20346937 |
GO_REF:0000033 |
NCBI chr 1:143,165,914...143,168,520
Ensembl chr 1:133,756,601...133,759,198
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G |
Nrarp |
Notch-regulated ankyrin repeat protein |
acts_upstream_of_or_within |
ISO |
MGI:5438570 (PMID:21998026) |
RGD |
PMID:21998026 |
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NCBI chr 3:7,992,582...7,995,136
Ensembl chr 3:7,992,552...7,995,133
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G |
Otx2 |
orthodenticle homeobox 2 |
acts_upstream_of_or_within |
ISO |
MGI:1857502 (PMID:11291865) |
RGD |
PMID:11291865 |
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NCBI chr15:24,422,876...24,432,709
Ensembl chr15:21,943,191...21,953,416
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G |
Ripply1 |
ripply transcriptional repressor 1 |
acts_upstream_of_or_within |
ISO |
MGI:2685968 (PMID:20346937) |
RGD |
PMID:20346937 |
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NCBI chr X:103,436,731...103,440,904
Ensembl chr X:103,436,729...103,443,349
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G |
Ripply2 |
ripply transcriptional repressor 2 |
involved_in acts_upstream_of_or_within |
ISO |
(PMID:16326386) MGI:3614797 (PMID:20346937) |
RGD |
PMID:16326386 PMID:20346937 |
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NCBI chr 8:87,974,444...87,979,002
Ensembl chr 8:87,974,776...87,978,969
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G |
Smad4 |
SMAD family member 4 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1858049 (PMID:9420335) |
Ensembl RGD |
PMID:9420335 |
GO_REF:0000107 |
NCBI chr18:69,518,988...69,549,684
Ensembl chr18:67,243,742...67,274,438
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G |
Tbx6 |
T-box transcription factor 6 |
acts_upstream_of_or_within |
ISO |
(PMID:20346937) |
RGD |
PMID:20346937 |
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NCBI chr 1:190,818,397...190,823,824
Ensembl chr 1:181,388,684...181,392,593
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G |
Tmed2 |
transmembrane p24 trafficking protein 2 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:4456438 (PMID:20178780) |
Ensembl RGD |
PMID:20178780 |
GO_REF:0000107 |
NCBI chr12:37,713,522...37,722,606
Ensembl chr12:32,052,543...32,071,903
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G |
Ahi1 |
Abelson helper integration site 1 |
involved_in |
ISS |
GO_REF:0000024 |
UniProt |
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GO_REF:0000024 |
NCBI chr 1:17,580,859...17,711,775
Ensembl chr 1:15,762,462...15,891,041
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G |
Bcor |
BCL6 co-repressor |
involved_in |
ISO |
(PMID:17517692) |
RGD |
PMID:17517692 |
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NCBI chr X:13,282,431...13,402,254
Ensembl chr X:10,687,732...10,729,613
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G |
Neurog1 |
neurogenin 1 |
involved_in |
ISO |
UniProtKB:Q6ZNK6|UniProtKB:Q8TF63 (PMID:23419067) |
RGD |
PMID:23419067 |
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NCBI chr17:8,368,096...8,369,615
Ensembl chr17:8,362,821...8,364,571
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G |
Tifab |
TIFA inhibitor |
involved_in |
ISO |
UniProtKB:Q8TF63|UniProtKB:Q92886 (PMID:23419067) |
RGD |
PMID:23419067 |
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NCBI chr17:8,438,622...8,441,750
Ensembl chr17:8,431,635...8,436,592
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G |
Wt1 |
WT1 transcription factor |
involved_in |
ISO ISS |
(PMID:8395349) GO_REF:0000024 |
RGD UniProt |
PMID:8395349 |
GO_REF:0000024 |
NCBI chr 3:112,019,721...112,068,454
Ensembl chr 3:91,567,001...91,613,643
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G |
Nckap1 |
NCK-associated protein 1 |
acts_upstream_of_or_within |
ISO |
MGI:3578145 (PMID:16831833) |
RGD |
PMID:16831833 |
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NCBI chr 3:85,824,333...85,898,748
Ensembl chr 3:65,417,453...65,492,217
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G |
Pcsk6 |
proprotein convertase subtilisin/kexin type 6 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2181754|MGI:97359 (PMID:10809672) |
Ensembl RGD |
PMID:10809672 |
GO_REF:0000107 |
NCBI chr 1:119,428,978...119,627,626
Ensembl chr 1:119,429,265...119,627,596
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G |
Smad2 |
SMAD family member 2 |
involved_in |
ISO |
(PMID:9436979) |
RGD |
PMID:9436979 |
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NCBI chr18:72,124,792...72,193,345
Ensembl chr18:69,850,377...69,912,323
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G |
Smad6 |
SMAD family member 6 |
involved_in |
ISO |
(PMID:9436979) |
RGD |
PMID:9436979 |
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NCBI chr 8:73,345,457...73,414,985
Ensembl chr 8:64,450,114...64,519,763
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Term paths to the root
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