Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:response to fungus
go back to main search page
Accession:GO:0009620 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a fungus.
Synonyms:exact_synonym: response to fungi
 alt_id: GO:0009621

GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
response to fungus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg5 autophagy related 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22710871) Ensembl
MGI		 PMID:22710871 GO_REF:0000107 NCBI chrNW_004624780:15,987,483...16,124,158
Ensembl chrNW_004624780:15,987,397...16,124,151 		JBrowse link
G Bak1 BCL2 antagonist/killer 1 acts_upstream_of_or_within ISO (PMID:16893972) MGI PMID:16893972 NCBI chrNW_004624754:23,297,077...23,302,366
Ensembl chrNW_004624754:23,296,800...23,301,223 		JBrowse link
G Bcl10 BCL10 immune signaling adaptor acts_upstream_of_or_within ISO (PMID:16862125) MGI PMID:16862125 NCBI chrNW_004624742:12,210,333...12,222,533
Ensembl chrNW_004624742:12,210,360...12,221,759 		JBrowse link
G Card9 caspase recruitment domain family member 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16862125) Ensembl
MGI		 PMID:16862125 GO_REF:0000107 NCBI chrNW_004624760:1,533,247...1,542,529
Ensembl chrNW_004624760:1,533,390...1,540,162 		JBrowse link
G Il25 interleukin 25 acts_upstream_of_or_within ISO (PMID:12077275) MGI PMID:12077275 NCBI chrNW_004624820:9,188,709...9,192,180
Ensembl chrNW_004624820:9,188,612...9,191,990 		JBrowse link
G Malt1 MALT1 paracaspase acts_upstream_of_or_within ISO (PMID:16862125) MGI PMID:16862125 NCBI chrNW_004624792:4,148,258...4,223,431
Ensembl chrNW_004624792:4,148,453...4,217,548 		JBrowse link
antifungal humoral response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein involved_in ISO PMID:20209079 UniProt PMID:20209079 RGD:10400853 NCBI chrNW_004624745:13,904,912...14,159,374
Ensembl chrNW_004624745:13,902,577...14,159,372 		JBrowse link
G Il36rn interleukin 36 receptor antagonist involved_in ISO (PMID:23147407) UniProt PMID:23147407 NCBI chrNW_004624749:13,137,512...13,145,578
Ensembl chrNW_004624749:13,137,782...13,143,031 		JBrowse link
antifungal innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl10 BCL10 immune signaling adaptor involved_in ISO (PMID:22265677) UniProt PMID:22265677 NCBI chrNW_004624742:12,210,333...12,222,533
Ensembl chrNW_004624742:12,210,360...12,221,759 		JBrowse link
G Card9 caspase recruitment domain family member 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624760:1,533,247...1,542,529
Ensembl chrNW_004624760:1,533,390...1,540,162 		JBrowse link
G Clec4e C-type lectin domain family 4 member E involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624860:4,108,782...4,113,693
Ensembl chrNW_004624860:4,108,640...4,113,839 		JBrowse link
G Clec7a C-type lectin domain containing 7A involved_in ISO (PMID:19136564)
(PMID:17159984), (PMID:32358020)		 ARUK-UCL
UniProt		 PMID:17159984 PMID:19136564 PMID:32358020 NCBI chrNW_004624752:26,871,556...26,885,778
Ensembl chrNW_004624752:26,871,292...26,891,910 		JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 involved_in ISO (PMID:29326275) UniProt PMID:29326275 NCBI chrNW_004624731:1,705,953...1,719,452
Ensembl chrNW_004624731:1,706,043...1,719,452 		JBrowse link
G Defb136 defensin beta 136 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624758:25,439,976...25,440,556
Ensembl chrNW_004624758:25,439,976...25,440,556 		JBrowse link
G LOC101717384 beta-defensin 119 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624741:1,123,271...1,133,739 JBrowse link
G Plcg2 phospholipase C gamma 2 involved_in ISO (PMID:22041900) ARUK-UCL PMID:22041900 NCBI chrNW_004624746:5,678,057...5,824,663
Ensembl chrNW_004624746:5,682,666...5,821,855 		JBrowse link
cellular response to molecule of fungal origin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btk Bruton tyrosine kinase ISO RGD PMID:10744701 RGD:1600536 NCBI chrNW_004624902:1,173,101...1,216,662
Ensembl chrNW_004624902:1,182,682...1,216,171 		JBrowse link
G Clec7a C-type lectin domain containing 7A involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624752:26,871,556...26,885,778
Ensembl chrNW_004624752:26,871,292...26,891,910 		JBrowse link
G LOC106009456 C-type lectin domain family 1 member A-like involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624752:27,050,901...27,062,224 JBrowse link
G Scimp SLP adaptor and CSK interacting membrane protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624786:8,975,216...8,982,825
Ensembl chrNW_004624786:8,974,587...9,007,986 		JBrowse link
G Syk spleen associated tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624868:1,654,079...1,738,648
Ensembl chrNW_004624868:1,653,997...1,701,391 		JBrowse link
defense response to fungus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cotl1 coactosin like F-actin binding protein 1 involved_in ISO (PMID:11785969) UniProt PMID:11785969 NCBI chrNW_004624746:1,485,301...1,510,193
Ensembl chrNW_004624746:1,485,321...1,510,276 		JBrowse link
G Gapdh glyceraldehyde-3-phosphate dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624860:3,257,805...3,261,736
Ensembl chrNW_004624860:3,257,853...3,261,735 		JBrowse link
G Gpr15lg G protein-coupled receptor 15 ligand involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624841:2,845,796...2,852,575
Ensembl chrNW_004624841:2,846,117...2,852,539 		JBrowse link
G Hamp hepcidin antimicrobial peptide acts_upstream_of_or_within ISO (PMID:2995362) MGI PMID:2995362 NCBI chrNW_004624794:8,257,760...8,259,243
Ensembl chrNW_004624794:8,257,760...8,259,264 		JBrowse link
G Hrg histidine rich glycoprotein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:70,070,302...70,086,256 JBrowse link
G Il17a interleukin 17A involved_in ISO (PMID:20554964) UniProt PMID:20554964 NCBI chrNW_004624855:3,911,349...3,914,214
Ensembl chrNW_004624855:3,911,349...3,913,136 		JBrowse link
G Il17ra interleukin 17 receptor A involved_in ISO (PMID:20554964) UniProt PMID:20554964 NCBI chrNW_004624735:10,139,787...10,164,074
Ensembl chrNW_004624735:10,138,418...10,164,198 		JBrowse link
G Il17rc interleukin 17 receptor C involved_in ISO (PMID:20554964) UniProt PMID:20554964 NCBI chrNW_004624731:4,524,090...4,536,879
Ensembl chrNW_004624731:4,525,556...4,536,858 		JBrowse link
G LOC101703821 HLA class II histocompatibility antigen, DQ beta 1 chain ISO Pneumocystis carinii RGD PMID:20377877 RGD:4144112 NCBI chrNW_004624754:23,895,509...23,902,487
Ensembl chrNW_004624754:23,895,607...23,906,713 		JBrowse link
G LOC101705441 neutrophil elastase-like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004625158:12,527...15,343 JBrowse link
G LOC101715199 neutrophil elastase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10714686)
(PMID:10714686), (PMID:11907569)		 Ensembl
MGI		 PMID:10714686 PMID:11907569 GO_REF:0000107 NCBI chrNW_004624828:7,720,020...7,722,842 JBrowse link
G Mpo myeloperoxidase acts_upstream_of_or_within ISO (PMID:10085024) MGI PMID:10085024 NCBI chrNW_004624871:121,026...131,433
Ensembl chrNW_004624871:121,026...131,323 		JBrowse link
G Ncf1 neutrophil cytosolic factor 1 acts_upstream_of_or_within ISO (PMID:16041040)
(PMID:10714686)		 MGI PMID:10714686 PMID:16041040 NCBI chrNW_004624740:13,428,375...13,439,915
Ensembl chrNW_004624740:13,429,476...13,439,807 		JBrowse link
G Nlrp10 NLR family pyrin domain containing 10 involved_in ISO (PMID:23071280) UniProt PMID:23071280 NCBI chrNW_004624766:172,727...177,029 JBrowse link
G Pik3cd phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta acts_upstream_of_or_within ISO (PMID:24009720) MGI PMID:24009720 NCBI chrNW_004624818:2,751,724...2,789,145
Ensembl chrNW_004624818:2,751,724...2,779,999 		JBrowse link
G Rnase7 ribonuclease A family member 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624825:7,034,523...7,036,967
Ensembl chrNW_004624825:7,036,229...7,036,702 		JBrowse link
G Spon2 spondin 2 acts_upstream_of_or_within ISO (PMID:14691481) MGI PMID:14691481 NCBI chrNW_004624755:26,045,617...26,049,951
Ensembl chrNW_004624755:26,045,493...26,053,476 		JBrowse link
G Tgfb1 transforming growth factor beta 1 ISO RGD PMID:16272332 RGD:1579756 NCBI chrNW_004624907:162,567...175,696
Ensembl chrNW_004624907:161,569...176,605 		JBrowse link
G Zbp1 Z-DNA binding protein 1 involved_in ISO (PMID:33109609) UniProt PMID:33109609 NCBI chrNW_004624741:24,022,433...24,033,090 JBrowse link
detection of molecule of fungal origin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec7a C-type lectin domain containing 7A involved_in ISO (PMID:15213161) UniProt PMID:15213161 NCBI chrNW_004624752:26,871,556...26,885,778
Ensembl chrNW_004624752:26,871,292...26,891,910 		JBrowse link
detection of yeast term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec7a C-type lectin domain containing 7A acts_upstream_of_or_within
involved_in		 ISO (PMID:14698225)
(PMID:19136564)		 MGI
ARUK-UCL		 PMID:14698225 PMID:19136564 NCBI chrNW_004624752:26,871,556...26,885,778
Ensembl chrNW_004624752:26,871,292...26,891,910 		JBrowse link
negative regulation of antifungal innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fam3a FAM3 metabolism regulating signaling molecule A involved_in ISO (PMID:18212107) UniProt PMID:18212107 NCBI chrNW_004624946:974,903...981,798
Ensembl chrNW_004624946:972,676...982,049 		JBrowse link
G Usp15 ubiquitin specific peptidase 15 involved_in ISO (PMID:33093067) UniProt PMID:33093067 NCBI chrNW_004624802:5,559,107...5,682,338
Ensembl chrNW_004624802:5,560,574...5,682,300 		JBrowse link
neutrophil-mediated killing of fungus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101705441 neutrophil elastase-like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004625158:12,527...15,343 JBrowse link
G LOC101715199 neutrophil elastase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11907569) Ensembl
MGI		 PMID:11907569 GO_REF:0000107 NCBI chrNW_004624828:7,720,020...7,722,842 JBrowse link
G Ncf1 neutrophil cytosolic factor 1 acts_upstream_of_or_within ISO (PMID:11907569) MGI PMID:11907569 NCBI chrNW_004624740:13,428,375...13,439,915
Ensembl chrNW_004624740:13,429,476...13,439,807 		JBrowse link
positive regulation of antifungal innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pla2g5 phospholipase A2 group V involved_in ISO (PMID:19342668) UniProt PMID:19342668 NCBI chrNW_004624764:5,196,215...5,207,138
Ensembl chrNW_004624764:5,196,215...5,207,232 		JBrowse link
G Spi1 Spi-1 proto-oncogene involved_in ISO (PMID:30911105) ARUK-UCL PMID:30911105 NCBI chrNW_004624767:1,376,649...1,404,382
Ensembl chrNW_004624767:1,394,704...1,404,406 		JBrowse link
G Trim62 tripartite motif containing 62 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624764:16,200,539...16,230,713
Ensembl chrNW_004624764:16,200,539...16,230,780 		JBrowse link
positive regulation of neutrophil mediated killing of fungus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg1 arginase 1 involved_in ISO (PMID:15546957) UniProt PMID:15546957 NCBI chrNW_004624753:5,737,720...5,749,313
Ensembl chrNW_004624753:5,737,237...5,752,966 		JBrowse link
G Pomc proopiomelanocortin involved_in ISO (PMID:10670585) UniProt PMID:10670585 NCBI chrNW_004624738:7,442,223...7,448,513
Ensembl chrNW_004624738:7,442,292...7,445,020 		JBrowse link
response to molecule of fungal origin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec7a C-type lectin domain containing 7A acts_upstream_of_or_within ISO (PMID:12719478) MGI PMID:12719478 NCBI chrNW_004624752:26,871,556...26,885,778
Ensembl chrNW_004624752:26,871,292...26,891,910 		JBrowse link
G Gpx3 glutathione peroxidase 3 ISO fungal nephrotoxin orellanine RGD PMID:18279679 RGD:2312625 NCBI chrNW_004624733:40,957,895...40,963,469
Ensembl chrNW_004624733:40,957,999...40,962,993 		JBrowse link
G Myd88 MYD88 innate immune signal transduction adaptor acts_upstream_of_or_within ISO (PMID:12719478) MGI PMID:12719478 NCBI chrNW_004624731:2,677,259...2,681,408
Ensembl chrNW_004624731:2,677,290...2,681,489 		JBrowse link
G Tlr2 toll like receptor 2 acts_upstream_of_or_within ISO (PMID:12719478) MGI PMID:12719478 NCBI chrNW_004624858:4,931,820...4,984,175
Ensembl chrNW_004624858:4,979,485...4,981,833 		JBrowse link
response to yeast term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein involved_in ISO PMID:20209079 UniProt PMID:20209079 RGD:10400853 NCBI chrNW_004624745:13,904,912...14,159,374
Ensembl chrNW_004624745:13,902,577...14,159,372 		JBrowse link
G Cd86 CD86 molecule ISO RGD PMID:19494083 RGD:2313435 NCBI chrNW_004624912:350,201...432,410
Ensembl chrNW_004624912:350,157...426,712 		JBrowse link
G Clec7a C-type lectin domain containing 7A acts_upstream_of_or_within
involved_in		 ISO (PMID:12719478), (PMID:14707091), (PMID:14726497)
(PMID:19136564)		 MGI
ARUK-UCL		 PMID:12719478 PMID:14707091 PMID:14726497 PMID:19136564 NCBI chrNW_004624752:26,871,556...26,885,778
Ensembl chrNW_004624752:26,871,292...26,891,910 		JBrowse link
G Crk CRK proto-oncogene, adaptor protein ISO RGD PMID:19958054 RGD:4107734 NCBI chrNW_004624786:4,153,783...4,177,611
Ensembl chrNW_004624786:4,153,889...4,177,716 		JBrowse link
G Il6 interleukin 6 ISO Probiotic Saccharomyces boulardii RGD PMID:19375719 RGD:8693605 NCBI chrNW_004624739:7,957,709...7,963,414
Ensembl chrNW_004624739:7,957,674...7,962,318 		JBrowse link
G LOC101705441 neutrophil elastase-like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004625158:12,527...15,343 JBrowse link
G LOC101715199 neutrophil elastase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11907569) Ensembl
MGI		 PMID:11907569 GO_REF:0000107 NCBI chrNW_004624828:7,720,020...7,722,842 JBrowse link
G Mpo myeloperoxidase acts_upstream_of_or_within ISO (PMID:10085024) MGI PMID:10085024 NCBI chrNW_004624871:121,026...131,433
Ensembl chrNW_004624871:121,026...131,323 		JBrowse link
G Ncf1 neutrophil cytosolic factor 1 acts_upstream_of_or_within ISO (PMID:10714686), (PMID:11907569) MGI PMID:10714686 PMID:11907569 NCBI chrNW_004624740:13,428,375...13,439,915
Ensembl chrNW_004624740:13,429,476...13,439,807 		JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 ISO Saccharomyces boulardii RGD PMID:19958054 RGD:4107734 NCBI chrNW_004624815:1,290,106...1,376,961
Ensembl chrNW_004624815:1,289,997...1,369,610 		JBrowse link
G Plcg2 phospholipase C gamma 2 involved_in ISO (PMID:22041900) ARUK-UCL PMID:22041900 NCBI chrNW_004624746:5,678,057...5,824,663
Ensembl chrNW_004624746:5,682,666...5,821,855 		JBrowse link
G Ptx3 pentraxin 3 acts_upstream_of_or_within ISO (PMID:14726497) MGI PMID:14726497 NCBI chrNW_004624730:35,125,536...35,131,645
Ensembl chrNW_004624730:35,125,605...35,131,367 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17653
    biological process involved in interspecies interaction between organisms 1508
      response to other organism 1418
        response to fungus 52
          cellular response to molecule of oomycetes origin 0
          defense response to fungus + 36
          detection of fungus + 1
          response to molecule of fungal origin + 8
          response to symbiotic fungus + 0
          response to yeast + 12
Path 2
Term Annotations click to browse term
  biological_process 17653
    response to stimulus 8924
      response to external stimulus 2265
        response to external biotic stimulus 1421
          response to other organism 1418
            response to fungus 52
              cellular response to molecule of oomycetes origin 0
              defense response to fungus + 36
              detection of fungus + 1
              response to molecule of fungal origin + 8
              response to symbiotic fungus + 0
              response to yeast + 12
paths to the root