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ONTOLOGY REPORT - ANNOTATIONS

Term:response to radiation
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Accession:GO:0009314 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation.
Comment:Note that 'radiation' refers to electromagnetic radiation of any wavelength.
Synonyms:exact_synonym: response to electromagnetic radiation stimulus;   response to radiation stimulus


show annotations for term's descendants           Sort by:
response to radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2l1 Bcl2-like 1 acts_upstream_of_or_within ISO MGI:2158303 (PMID:14517295) RGD PMID:14517295 NCBI chr 3:161,713,777...161,764,844
Ensembl chr 3:141,253,523...141,303,479
Ensembl chr 1:141,253,523...141,303,479 		JBrowse link
G Cdc25a cell division cycle 25A involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:21376736)		 UniProt
Ensembl
RGD		 PMID:21376736 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:118,742,824...118,761,190
Ensembl chr 8:109,864,478...109,882,701 		JBrowse link
G Col3a1 collagen type III alpha 1 chain involved_in ISO (PMID:14736764) RGD PMID:14736764 NCBI chr 9:54,866,646...54,902,578
Ensembl chr 9:47,374,593...47,410,547 		JBrowse link
G Fancg FA complementation group G acts_upstream_of_or_within ISO MGI:2183264 (PMID:11719385) RGD PMID:11719385 NCBI chr 5:62,027,494...62,037,202
Ensembl chr 5:57,231,685...57,240,029 		JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:1856266 (PMID:12833143) RGD PMID:12833143 NCBI chr14:32,901,615...32,978,895
Ensembl chr14:32,548,877...32,624,652 		JBrowse link
G Krt14 keratin 14 acts_upstream_of_or_within ISO (PMID:30305288) RGD PMID:30305288 NCBI chr10:85,638,182...85,642,450
Ensembl chr10:85,066,802...85,171,799 		JBrowse link
G Mbd4 methyl-CpG binding domain 4 DNA glycosylase acts_upstream_of_or_within ISO MGI:2183491 (PMID:14562041) RGD PMID:14562041 NCBI chr 4:150,565,646...150,577,433
Ensembl chr 4:148,894,280...148,904,982 		JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor acts_upstream_of_or_within ISO MGI:2447604 (PMID:14517295) RGD PMID:14517295 NCBI chr 7:95,483,105...95,488,031
Ensembl chr 7:93,593,705...93,598,630 		JBrowse link
G Ogg1 8-oxoguanine DNA glycosylase involved_in ISS
ISO		 GO_REF:0000024
(PMID:17148573)		 UniProt
RGD		 PMID:17148573 GO_REF:0000024 NCBI chr 4:148,030,237...148,037,599
Ensembl chr 4:146,474,750...146,484,766 		JBrowse link
G Plk3 polo-like kinase 3 involved_in ISS
ISO		 GO_REF:0000024
(PMID:21376736)		 UniProt
RGD		 PMID:21376736 GO_REF:0000024 NCBI chr 5:135,843,725...135,848,900
Ensembl chr 5:130,607,142...130,612,317 		JBrowse link
G Polh DNA polymerase eta involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:22,275,929...22,310,576
Ensembl chr 9:14,777,888...14,812,723 		JBrowse link
G Smc1a structural maintenance of chromosomes 1A involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:11877377)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:11877377 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:24,582,732...24,627,462
Ensembl chr  X:21,103,282...21,148,056 		JBrowse link
G Snai2 snail family transcriptional repressor 2 acts_upstream_of_or_within ISO MGI:2447176 (PMID:12833143) RGD PMID:12833143 NCBI chr11:99,686,934...99,690,349
Ensembl chr11:86,181,909...86,186,200 		JBrowse link
G Txn1 thioredoxin 1 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:11118054), (PMID:9108029)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:9108029 PMID:11118054 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:77,507,455...77,519,685
Ensembl chr 5:72,711,933...72,724,629 		JBrowse link
absorption of visible light term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rho rhodopsin involved_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 4:150,653,205...150,658,367
Ensembl chr 4:148,980,611...148,985,773 		JBrowse link
background adaptation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gnat1 G protein subunit alpha transducin 1 acts_upstream_of_or_within ISO MGI:2152779 (PMID:24373883) RGD PMID:24373883 NCBI chr 8:117,229,575...117,234,311
Ensembl chr 8:108,350,935...108,355,671 		JBrowse link
G Gnat2 G protein subunit alpha transducin 2 acts_upstream_of_or_within ISO MGI:3588845 (PMID:24373883) RGD PMID:24373883 NCBI chr 2:198,414,568...198,431,532
Ensembl chr 2:195,726,762...195,735,866 		JBrowse link
cellular response to gamma radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase involved_in ISO (PMID:16213212), (PMID:9925639) RGD PMID:9925639 PMID:16213212 NCBI chr 8:62,724,939...62,829,040
Ensembl chr 8:53,831,093...53,932,437 		JBrowse link
G Atr ATR serine/threonine kinase involved_in ISO (PMID:9925639) RGD PMID:9925639 NCBI chr 8:105,306,299...105,403,742
Ensembl chr 8:96,426,724...96,524,136 		JBrowse link
G Bcl2l1 Bcl2-like 1 acts_upstream_of_or_within ISO (PMID:15231831) RGD PMID:15231831 NCBI chr 3:161,713,777...161,764,844
Ensembl chr 3:141,253,523...141,303,479
Ensembl chr 1:141,253,523...141,303,479 		JBrowse link
G Cdkn1a cyclin-dependent kinase inhibitor 1A acts_upstream_of_or_within ISO (PMID:10710310) RGD PMID:10710310 NCBI chr20:7,150,820...7,161,373
Ensembl chr20:7,149,217...7,159,585 		JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A involved_in ISO (PMID:19057511) RGD PMID:19057511 NCBI chr 5:109,100,763...109,114,448
Ensembl chr 5:103,984,949...104,003,149 		JBrowse link
G Chek2 checkpoint kinase 2 acts_upstream_of_or_within ISO MGI:2386905 (PMID:10710310) RGD PMID:10710310 NCBI chr12:51,448,838...51,481,159
Ensembl chr12:45,788,827...45,821,286 		JBrowse link
G Cryab crystallin, alpha B acts_upstream_of_or_within ISO (PMID:23542032) RGD PMID:23542032 NCBI chr 8:59,989,885...59,995,532
Ensembl chr 8:51,093,441...51,099,157 		JBrowse link
G Cyba cytochrome b-245 alpha chain IEP RGD PMID:18640264 RGD:2317861 NCBI chr19:67,396,143...67,404,214
Ensembl chr19:50,487,597...50,495,721 		JBrowse link
G Ddias DNA damage-induced apoptosis suppressor acts_upstream_of_or_within ISO (PMID:17515607) RGD PMID:17515607 NCBI chr 1:156,318,559...156,342,869
Ensembl chr 1:146,906,154...146,930,462 		JBrowse link
G Egr1 early growth response 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:19057511)		 Ensembl
RGD		 PMID:19057511 GO_REF:0000107 NCBI chr18:26,737,078...26,740,877
Ensembl chr18:26,462,981...26,466,766 		JBrowse link
G Elk1 ETS transcription factor ELK1 IDA RGD PMID:17949253 RGD:7488908 NCBI chr  X:3,692,367...3,709,252
Ensembl chr  X:1,139,756...1,155,713 		JBrowse link
G Gtf2h5 general transcription factor IIH subunit 5 acts_upstream_of_or_within ISO MGI:5514340 (PMID:23637614) RGD PMID:23637614 NCBI chr 1:49,061,904...49,068,612
Ensembl chr 1:46,656,859...46,664,939 		JBrowse link
G H2ax H2A.X variant histone IDA RGD PMID:17552875 RGD:8693710 NCBI chr 8:53,568,718...53,570,072
Ensembl chr 8:44,671,786...44,673,239
Ensembl chr 4:44,671,786...44,673,239 		JBrowse link
G Hras HRas proto-oncogene, GTPase involved_in ISO (PMID:16213212) RGD PMID:16213212 NCBI chr 1:205,712,625...205,729,406
Ensembl chr 1:196,296,263...196,300,615 		JBrowse link
G Hsf1 heat shock transcription factor 1 involved_in ISO (PMID:26359349) RGD PMID:26359349 NCBI chr 7:110,076,710...110,103,665
Ensembl chr 7:108,196,056...108,223,011 		JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 IEP RGD PMID:20470193 RGD:11354917 NCBI chr 3:38,453,016...38,457,475
Ensembl chr 3:18,055,405...18,059,891 		JBrowse link
G Kdm1a lysine demethylase 1A acts_upstream_of_or_within ISO (PMID:24217620) RGD PMID:24217620 NCBI chr 5:154,066,436...154,121,913
Ensembl chr 5:148,782,976...148,838,319 		JBrowse link
G Map3k20 mitogen-activated protein kinase kinase kinase 20 involved_in ISO (PMID:11836244) RGD PMID:11836244 NCBI chr 3:77,538,146...77,697,540
Ensembl chr 3:57,130,551...57,289,626 		JBrowse link
G Mdm2 MDM2 proto-oncogene involved_in ISO (PMID:16213212) RGD PMID:16213212 NCBI chr 7:55,176,558...55,201,757
Ensembl chr 7:53,290,664...53,314,915 		JBrowse link
G Mir21 microRNA 21 involved_in ISO (PMID:19826040) RGD PMID:19826040 NCBI chr10:71,902,600...71,902,691
Ensembl chr10:71,405,257...71,405,348 		JBrowse link
G Nox4 NADPH oxidase 4 IEP RGD PMID:18640264 RGD:2317861 NCBI chr 1:150,313,736...150,491,480
Ensembl chr 1:140,901,097...141,077,406 		JBrowse link
G Rad51 RAD51 recombinase IEP RGD PMID:9885240 RGD:9831175 NCBI chr 3:126,554,210...126,578,888
Ensembl chr 3:106,100,381...106,125,035 		JBrowse link
G Rnf4 ring finger protein 4 IMP RGD PMID:22661230 RGD:9480235 NCBI chr14:80,625,864...80,647,138
Ensembl chr14:76,401,299...76,422,566 		JBrowse link
G Rpl13a ribosomal protein L13A IEP RGD PMID:10483362 RGD:11036101 NCBI chr 1:104,746,223...104,748,975
Ensembl chr 1:95,609,370...95,620,463 		JBrowse link
G Rpl26 ribosomal protein L26 involved_in ISO
IEA		 (PMID:16213212)
GO_REF:0000107		 RGD
Ensembl		 PMID:16213212 GO_REF:0000107 NCBI chr10:54,109,692...54,112,822
Ensembl chr10:53,610,421...53,613,966 		JBrowse link
G Tlk2 tousled-like kinase 2 involved_in ISO (PMID:12660173) RGD PMID:12660173 NCBI chr10:90,648,623...90,748,427
Ensembl chr10:90,156,813...90,248,561 		JBrowse link
G Tmem109 transmembrane protein 109 acts_upstream_of_or_within
involved_in		 ISO
IBA
IEA		 (PMID:23542032)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000002		 RGD
GO_Central
Ensembl
InterPro		 PMID:23542032 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:216,944,516...216,955,091
Ensembl chr 1:207,519,624...207,530,215 		JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:16213212)
(PMID:10710310)
GO_REF:0000107		 RGD
Ensembl		 PMID:10710310 PMID:16213212 GO_REF:0000107 NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO (PMID:18045533) RGD PMID:18045533 NCBI chr 8:118,585,082...118,586,382
Ensembl chr 8:109,706,613...109,708,796 		JBrowse link
G Tspyl5 TSPY-like 5 involved_in ISO (PMID:20079711) RGD PMID:20079711 NCBI chr 7:66,766,695...66,770,702
Ensembl chr 7:64,884,225...64,885,457 		JBrowse link
G Wrn WRN RecQ like helicase involved_in ISO (PMID:21639834) RGD PMID:21639834 NCBI chr16:65,466,552...65,602,951
Ensembl chr16:58,763,504...58,895,450 		JBrowse link
G Xrcc5 X-ray repair cross complementing 5 involved_in ISO (PMID:26359349) RGD PMID:26359349 NCBI chr 9:81,404,507...81,493,293
Ensembl chr 9:73,955,216...74,044,018 		JBrowse link
G Xrcc6 X-ray repair cross complementing 6 involved_in ISO (PMID:26359349) RGD PMID:26359349 NCBI chr 7:115,423,026...115,443,884
Ensembl chr 7:113,543,057...113,563,762 		JBrowse link
G Yap1 Yes1 associated transcriptional regulator involved_in ISO
IEA
ISS		 (PMID:18280240)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:18280240 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:13,380,551...13,451,640
Ensembl chr 8:5,095,722...5,167,010 		JBrowse link
G Zmpste24 zinc metallopeptidase STE24 acts_upstream_of_or_within ISO MGI:2180033 (PMID:15980864) RGD PMID:15980864 NCBI chr 5:139,912,395...139,945,532
Ensembl chr 5:134,627,229...134,660,110 		JBrowse link
cellular response to high light intensity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt2 AKT serine/threonine kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2158456 (PMID:17202487)		 Ensembl
RGD		 PMID:17202487 GO_REF:0000107 NCBI chr 1:92,004,705...92,061,420
Ensembl chr 1:82,883,547...82,933,817 		JBrowse link
G Slc24a4 solute carrier family 24 member 4 involved_in ISO (PMID:28650316) RGD PMID:28650316 NCBI chr 6:127,044,470...127,184,684
Ensembl chr 6:121,280,031...121,414,949 		JBrowse link
cellular response to ionizing radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase IMP RGD PMID:28007901 RGD:12879399 NCBI chr 8:62,724,939...62,829,040
Ensembl chr 8:53,831,093...53,932,437 		JBrowse link
G Babam2 BRISC and BRCA1 A complex member 2 involved_in ISO
IEA		 (PMID:14636569)
GO_REF:0000107		 RGD
Ensembl		 PMID:14636569 GO_REF:0000107 NCBI chr 6:30,089,065...30,467,508
Ensembl chr 6:24,369,022...24,833,951 		JBrowse link
G Bard1 BRCA1 associated RING domain 1 involved_in ISO
IEA		 (PMID:14636569)
GO_REF:0000107		 RGD
Ensembl		 PMID:14636569 GO_REF:0000107 NCBI chr 9:80,069,960...80,144,167
Ensembl chr 9:72,623,155...72,694,265 		JBrowse link
G Bbc3 Bcl-2 binding component 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1096393|MGI:98834 (PMID:16286009)		 Ensembl
RGD		 PMID:16286009 GO_REF:0000107 NCBI chr 1:86,141,450...86,150,666
Ensembl chr 1:77,014,543...77,022,509 		JBrowse link
G Blm BLM RecQ like helicase involved_in ISO (PMID:23509288) RGD PMID:23509288 NCBI chr 1:143,819,072...143,905,300
Ensembl chr 1:134,409,857...134,484,312 		JBrowse link
G Brca1 BRCA1, DNA repair associated involved_in ISO
IEA		 (PMID:14636569)
GO_REF:0000107		 RGD
Ensembl		 PMID:14636569 GO_REF:0000107 NCBI chr10:86,917,693...86,978,012
Ensembl chr10:86,418,000...86,477,304 		JBrowse link
G Brca2 BRCA2, DNA repair associated involved_in ISO
IEA		 (PMID:14636569)
GO_REF:0000107		 RGD
Ensembl		 PMID:14636569 GO_REF:0000107 NCBI chr12:4,895,092...4,939,340
Ensembl chr12:59,819...100,567 		JBrowse link
G Brcc3 BRCA1/BRCA2-containing complex subunit 3 involved_in ISO (PMID:14636569) RGD PMID:14636569 NCBI chr 9:2,073,927...2,076,469
Ensembl chr 9:1,986,575...1,991,080 		JBrowse link
G Cdkn1a cyclin-dependent kinase inhibitor 1A involved_in ISO (PMID:20160708) RGD PMID:20160708 NCBI chr20:7,150,820...7,161,373
Ensembl chr20:7,149,217...7,159,585 		JBrowse link
G Clock clock circadian regulator involved_in IEA
ISO		 GO_REF:0000107
(PMID:21659603)		 Ensembl
RGD		 PMID:21659603 GO_REF:0000107 NCBI chr14:32,262,747...32,346,872
Ensembl chr14:31,908,566...31,990,400 		JBrowse link
G Ect2 epithelial cell transforming 2 involved_in ISO (PMID:21373644) RGD PMID:21373644 NCBI chr 2:111,904,522...111,966,786
Ensembl chr 2:109,975,813...110,037,911 		JBrowse link
G Eef1d eukaryotic translation elongation factor 1 delta involved_in ISO
IEA		 (PMID:8168075)
GO_REF:0000107		 RGD
Ensembl		 PMID:8168075 GO_REF:0000107 NCBI chr 7:109,462,645...109,478,021
Ensembl chr 7:107,581,930...107,608,799 		JBrowse link
G Fbxo4 F-box protein 4 acts_upstream_of_or_within ISO (PMID:21911473) RGD PMID:21911473 NCBI chr 2:54,902,394...54,915,388
Ensembl chr 2:53,174,798...53,187,792 		JBrowse link
G Fignl1 fidgetin-like 1 involved_in ISO
ISS		 (PMID:23754376)
GO_REF:0000024		 RGD
UniProt		 PMID:23754376 GO_REF:0000024 NCBI chr14:90,573,090...90,595,342
Ensembl chr14:86,368,675...86,377,455 		JBrowse link
G Gadd45a growth arrest and DNA-damage-inducible, alpha involved_in IEA
ISO		 GO_REF:0000107
(PMID:20160708)		 Ensembl
RGD		 PMID:20160708 GO_REF:0000107 NCBI chr 4:97,484,497...97,486,799
Ensembl chr 4:96,154,789...96,157,115 		JBrowse link
G Grb2 growth factor receptor bound protein 2 involved_in ISO
IEA		 (PMID:20160708)
GO_REF:0000107		 RGD
Ensembl		 PMID:20160708 GO_REF:0000107 NCBI chr10:101,380,354...101,448,138
Ensembl chr10:100,869,718...100,949,309 		JBrowse link
G Hus1 HUS1 checkpoint clamp component involved_in ISO (PMID:21659603) RGD PMID:21659603 NCBI chr14:87,902,458...87,917,221
Ensembl chr14:83,688,708...83,703,442 		JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in ISO (PMID:20687897) RGD PMID:20687897 NCBI chr 3:126,822,280...126,919,532
Ensembl chr 3:106,368,455...106,467,911 		JBrowse link
G Ints7 integrator complex subunit 7 involved_in ISO (PMID:21659603) RGD PMID:21659603 NCBI chr13:105,686,208...105,739,609
Ensembl chr13:103,155,090...103,208,592 		JBrowse link
G Itgb1 integrin subunit beta 1 IEP RGD PMID:19714308 RGD:2312872 NCBI chr19:73,602,277...73,650,271
Ensembl chr19:56,705,171...56,753,195 		JBrowse link
G Itgb6 integrin subunit beta 6 acts_upstream_of_or_within ISO (PMID:17916808) RGD PMID:17916808 NCBI chr 3:65,454,964...65,579,179
Ensembl chr 3:45,048,044...45,121,671 		JBrowse link
G Kdm4d lysine demethylase 4D acts_upstream_of_or_within ISO (PMID:24550317) RGD PMID:24550317 NCBI chr 8:19,561,253...19,586,412
Ensembl chr 8:11,268,859...11,305,290 		JBrowse link
G Lig4 DNA ligase 4 involved_in ISO UniProtKB:G5EGA3 (PMID:29463814) RGD PMID:29463814 NCBI chr16:86,220,345...86,228,930
Ensembl chr16:79,518,312...79,527,040 		JBrowse link
G Mapk14 mitogen activated protein kinase 14 involved_in ISO
IEA		 (PMID:20160708)
GO_REF:0000107		 RGD
Ensembl		 PMID:20160708 GO_REF:0000107 NCBI chr20:6,751,288...6,812,294
Ensembl chr20:6,749,670...6,810,589 		JBrowse link
G Mfn2 mitofusin 2 IEP RGD PMID:26415228 RGD:13204741 NCBI chr 5:163,587,463...163,617,363
Ensembl chr 5:158,304,287...158,335,342 		JBrowse link
G Mgmt O-6-methylguanine-DNA methyltransferase IEP RGD PMID:9780001 RGD:2316946 NCBI chr 1:201,140,832...201,367,481
Ensembl chr 1:191,710,930...191,937,756 		JBrowse link
G Mir21 microRNA 21 involved_in ISO (PMID:22836756) RGD PMID:22836756 NCBI chr10:71,902,600...71,902,691
Ensembl chr10:71,405,257...71,405,348 		JBrowse link
G Nampt nicotinamide phosphoribosyltransferase IEP RGD PMID:27681750 RGD:13781886 NCBI chr 6:55,152,756...55,189,547
Ensembl chr 6:49,424,332...49,462,100 		JBrowse link
G Net1 neuroepithelial cell transforming 1 involved_in ISO (PMID:21373644) RGD PMID:21373644 NCBI chr17:71,251,145...71,280,345
Ensembl chr17:66,340,728...66,370,441 		JBrowse link
G Rad1 RAD1 checkpoint DNA exonuclease involved_in ISO (PMID:21659603) RGD PMID:21659603 NCBI chr 2:61,188,755...61,196,868
Ensembl chr 2:59,461,607...59,469,689 		JBrowse link
G Rad51 RAD51 recombinase involved_in ISO (PMID:14636569), (PMID:23509288), (PMID:23754376) RGD PMID:14636569 PMID:23509288 PMID:23754376 NCBI chr 3:126,554,210...126,578,888
Ensembl chr 3:106,100,381...106,125,035 		JBrowse link
G Rad51ap1 RAD51 associated protein 1 involved_in ISO (PMID:23754376) RGD PMID:23754376 NCBI chr 4:161,445,610...161,458,661
Ensembl chr 4:159,759,459...159,772,524 		JBrowse link
G Rad9a RAD9 checkpoint clamp component A involved_in ISO
IBA		 (PMID:21659603)
GO_REF:0000033		 RGD
GO_Central		 PMID:21659603 GO_REF:0000033 NCBI chr 1:210,917,970...210,983,038
Ensembl chr 1:201,487,136...201,553,608 		JBrowse link
G Rad9b RAD9 checkpoint clamp component B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:39,878,221...39,909,254
Ensembl chr12:34,218,024...34,248,372 		JBrowse link
G Rhno1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 involved_in ISO
IEA		 (PMID:21659603)
GO_REF:0000002		 RGD
InterPro		 PMID:21659603 GO_REF:0000002 NCBI chr 4:163,320,141...163,325,527
Ensembl chr 4:161,634,048...161,639,371 		JBrowse link
G Rhob ras homolog family member B involved_in ISO
ISS		 (PMID:21373644)
GO_REF:0000024		 RGD
UniProt		 PMID:21373644 GO_REF:0000024 NCBI chr 6:37,083,030...37,085,204
Ensembl chr 6:31,363,548...31,366,108 		JBrowse link
G Rpl26 ribosomal protein L26 involved_in ISO (PMID:16213212) RGD PMID:16213212 NCBI chr10:54,109,692...54,112,822
Ensembl chr10:53,610,421...53,613,966 		JBrowse link
G Sirt1 sirtuin 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:17612497)		 Ensembl
RGD		 PMID:17612497 GO_REF:0000107 NCBI chr20:25,305,953...25,328,000
Ensembl chr20:25,306,917...25,329,260 		JBrowse link
G Snai2 snail family transcriptional repressor 2 acts_upstream_of_or_within ISO MGI:2181667|MGI:98834 (PMID:16286009) RGD PMID:16286009 NCBI chr11:99,686,934...99,690,349
Ensembl chr11:86,181,909...86,186,200 		JBrowse link
G Spidr scaffold protein involved in DNA repair involved_in ISO (PMID:23509288), (PMID:23754376) RGD PMID:23509288 PMID:23754376 NCBI chr11:98,270,779...98,511,760
Ensembl chr11:84,766,593...85,007,600 		JBrowse link
G Swi5 SWI5 homologous recombination repair protein involved_in ISS
ISO		 GO_REF:0000024
(PMID:23754376)		 UniProt
RGD		 PMID:23754376 GO_REF:0000024 NCBI chr 3:35,972,436...35,981,658
Ensembl chr 3:15,564,715...15,583,805 		JBrowse link
G Tank TRAF family member-associated NFKB activator involved_in ISO (PMID:25861989) RGD PMID:25861989 NCBI chr 3:66,522,834...66,598,864
Ensembl chr 3:46,114,274...46,190,264 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 acts_upstream_of_or_within IEP
ISO		 MGI:3513111 (PMID:17916808) RGD PMID:17916808 PMID:25600523 RGD:11073671 NCBI chr 1:90,324,312...90,340,627
Ensembl chr 1:81,196,532...81,212,847 		JBrowse link
G Tnf tumor necrosis factor involved_in ISO (PMID:22836756) RGD PMID:22836756 NCBI chr20:3,626,685...3,629,303
Ensembl chr20:3,622,011...3,624,629 		JBrowse link
G Tnks1bp1 tankyrase 1 binding protein 1 involved_in ISO
IBA		 (PMID:25749521)
GO_REF:0000033		 RGD
GO_Central		 PMID:25749521 GO_REF:0000033 NCBI chr 3:90,542,006...90,566,720
Ensembl chr 3:70,137,837...70,160,038 		JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within		 ISO (PMID:20160708)
(PMID:16213212)
MGI:1096393|MGI:2181667 (PMID:16286009)		 RGD PMID:16213212 PMID:16286009 PMID:20160708 NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
cellular response to light stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crb1 crumbs cell polarity complex component 1 acts_upstream_of_or_within ISO (PMID:17234588) RGD PMID:17234588 NCBI chr13:53,352,932...53,540,019
Ensembl chr13:50,800,959...50,989,261 		JBrowse link
G Gpr52 G protein-coupled receptor 52 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:75,333,683...75,338,407
Ensembl chr13:72,800,127...72,806,180 		JBrowse link
G Gpr88 G-protein coupled receptor 88 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:206,876,373...206,885,034
Ensembl chr 2:204,191,427...204,199,733 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha IEP RGD PMID:17475674 RGD:9068879 NCBI chr 6:98,357,788...98,405,068
Ensembl chr 6:92,624,390...92,669,261 		JBrowse link
G Kcne1 potassium voltage-gated channel subfamily E regulatory subunit 1 IEP RGD PMID:24202060 RGD:12910722 NCBI chr11:45,066,875...45,080,024
Ensembl chr11:31,580,742...31,593,901 		JBrowse link
G Opn1mw opsin 1, medium wave sensitive involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:157,056,355...157,076,716
Ensembl chr  X:151,905,096...151,925,388 		JBrowse link
G Opn1sw opsin 1, short wave sensitive involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:58,942,685...58,945,825
Ensembl chr 4:57,977,313...57,980,457 		JBrowse link
G Opn3 opsin 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:90,121,560...90,152,076
Ensembl chr13:87,589,333...87,619,847 		JBrowse link
G Opn4 opsin 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:9,926,638...9,935,810
Ensembl chr16:9,920,491...10,005,711 		JBrowse link
G Opn5 opsin 5 involved_in IBA
ISO		 GO_REF:0000033
(PMID:31607531)		 GO_Central
RGD		 PMID:31607531 GO_REF:0000033 NCBI chr 9:25,865,610...25,913,315
Ensembl chr 9:18,368,416...18,415,476 		JBrowse link
G Rgr retinal G protein coupled receptor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:12,821,858...12,836,665
Ensembl chr16:12,801,594...12,816,223 		JBrowse link
G Rho rhodopsin involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
(PMID:21052544)		 GO_Central
Ensembl
RGD		 PMID:21052544 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:150,653,205...150,658,367
Ensembl chr 4:148,980,611...148,985,773 		JBrowse link
G Rp1 RP1, axonemal microtubule associated acts_upstream_of_or_within ISO (PMID:21052544) RGD PMID:21052544 NCBI chr 5:19,918,728...20,380,811
Ensembl chr 5:15,121,133...15,579,363 		JBrowse link
G Rpgr retinitis pigmentosa GTPase regulator acts_upstream_of_or_within ISO MGI:2386674 (PMID:10725384) RGD PMID:10725384 NCBI chr  X:15,238,961...15,299,004
Ensembl chr  X:12,566,645...12,747,882 		JBrowse link
G Rrh retinal pigment epithelium derived rhodopsin homolog involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:221,036,436...221,048,627
Ensembl chr 2:218,362,200...218,374,599 		JBrowse link
G Trpm1 transient receptor potential cation channel, subfamily M, member 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:19896109)
(PMID:19861548)
MGI:4421441 (PMID:19966281), (PMID:21052544)		 RGD PMID:19861548 PMID:19896109 PMID:19966281 PMID:21052544 NCBI chr 1:127,130,686...127,247,219
Ensembl chr 1:117,718,896...117,834,605 		JBrowse link
cellular response to radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hsf1 heat shock transcription factor 1 IDA microwave RGD PMID:21241601 RGD:10403031 NCBI chr 7:110,076,710...110,103,665
Ensembl chr 7:108,196,056...108,223,011 		JBrowse link
G Irs1 insulin receptor substrate 1 IEP RGD PMID:17427956 RGD:10045897 NCBI chr 9:91,001,137...91,053,959
Ensembl chr 9:83,548,944...83,606,122 		JBrowse link
G Mtch2 mitochondrial carrier 2 acts_upstream_of_or_within ISO MGI:2449949|MGI:5566664 (PMID:26219591) RGD PMID:26219591 NCBI chr 3:97,286,388...97,306,028
Ensembl chr 3:76,830,413...76,850,189 		JBrowse link
G Nsmce3 NSE3 homolog, SMC5-SMC6 complex component involved_in ISO (PMID:27427983) RGD PMID:27427983 NCBI chr 1:127,812,572...127,813,899 JBrowse link
cellular response to UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp1 aquaporin 1 involved_in ISO
ISS		 (PMID:19424603)
GO_REF:0000024		 RGD
UniProt		 PMID:19424603 GO_REF:0000024 NCBI chr 4:85,812,784...85,824,964
Ensembl chr 4:84,482,512...84,494,690 		JBrowse link
G Atf4 activating transcription factor 4 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 7:113,684,681...113,686,739
Ensembl chr 7:111,804,183...111,806,446 		JBrowse link
G Atr ATR serine/threonine kinase involved_in ISO (PMID:9925639) RGD PMID:9925639 NCBI chr 8:105,306,299...105,403,742
Ensembl chr 8:96,426,724...96,524,136 		JBrowse link
G Aurkb aurora kinase B involved_in ISO
IEA
ISS		 (PMID:20959462)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:20959462 GO_REF:0000024 GO_REF:0000107 NCBI chr10:54,243,116...54,249,675
Ensembl chr10:53,745,142...53,750,837 		JBrowse link
G Bak1 BCL2-antagonist/killer 1 involved_in ISO (PMID:15901672) RGD PMID:15901672 NCBI chr20:5,102,334...5,111,615
Ensembl chr20:5,100,480...5,109,264 		JBrowse link
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO MGI:98834 (PMID:14963330) RGD PMID:14963330 NCBI chr 1:105,076,472...105,081,906
Ensembl chr 1:95,938,808...95,945,368 		JBrowse link
G Bmf Bcl2 modifying factor involved_in ISO
IEA		 (PMID:23629966)
GO_REF:0000107		 RGD
Ensembl		 PMID:23629966 GO_REF:0000107 NCBI chr 3:125,953,466...125,974,087
Ensembl chr 3:105,499,538...105,520,145 		JBrowse link
G Casp9 caspase 9 involved_in ISO (PMID:15657060) RGD PMID:15657060 Ensembl chr 5:154,109,046...154,126,626 JBrowse link
G Cops9 COP9 signalosome subunit 9 involved_in ISO (PMID:26456823) RGD PMID:26456823 NCBI chr 9:100,657,276...100,662,206
Ensembl chr 9:93,209,843...93,213,317 		JBrowse link
G Crebbp CREB binding protein involved_in IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(PMID:24939902)		 Ensembl
UniProt
RGD		 PMID:24939902 GO_REF:0000024 GO_REF:0000107 NCBI chr10:11,842,307...11,968,266
Ensembl chr10:11,335,953...11,461,888 		JBrowse link
G Cul4a cullin 4A involved_in ISO (PMID:22118460) RGD PMID:22118460 NCBI chr16:83,086,688...83,124,503
Ensembl chr16:76,384,546...76,422,330 		JBrowse link
G Ddb1 damage-specific DNA binding protein 1 involved_in ISO (PMID:22118460) RGD PMID:22118460 NCBI chr 1:216,677,810...216,703,605
Ensembl chr 1:207,252,890...207,278,676 		JBrowse link
G Ddb2 damage specific DNA binding protein 2 involved_in ISO (PMID:22118460) RGD PMID:22118460 NCBI chr 3:97,640,923...97,667,617
Ensembl chr 3:77,185,109...77,207,631 		JBrowse link
G Ddias DNA damage-induced apoptosis suppressor acts_upstream_of_or_within ISO (PMID:17515607) RGD PMID:17515607 NCBI chr 1:156,318,559...156,342,869
Ensembl chr 1:146,906,154...146,930,462 		JBrowse link
G Dhx36 DEAH-box helicase 36 involved_in ISO
ISS		 (PMID:27940037)
GO_REF:0000024		 RGD
UniProt		 PMID:27940037 GO_REF:0000024 NCBI chr 2:149,006,089...149,044,192
Ensembl chr 2:146,856,469...146,894,572 		JBrowse link
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in ISO (PMID:12176355) RGD PMID:12176355 NCBI chr 3:125,810,207...125,895,574
Ensembl chr 3:105,356,261...105,441,630 		JBrowse link
G Eif2s1 eukaryotic translation initiation factor 2 subunit alpha involved_in ISS
ISO		 GO_REF:0000024
(PMID:12176355)		 UniProt
RGD		 PMID:12176355 GO_REF:0000024 NCBI chr 6:103,405,880...103,430,549
Ensembl chr 6:97,672,766...97,706,225 		JBrowse link
G Ep300 E1A binding protein p300 involved_in ISO (PMID:24939902) RGD PMID:24939902 NCBI chr 7:114,987,857...115,058,652
Ensembl chr 7:113,106,247...113,136,088
Ensembl chr 7:113,106,247...113,136,088 		JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit involved_in ISO UniProtKB:Q15554 (PMID:17055345), (PMID:32034146) RGD PMID:17055345 PMID:32034146 NCBI chr10:2,926,085...2,958,176
Ensembl chr10:2,419,038...2,448,369
Ensembl chr10:2,419,038...2,448,369 		JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 involved_in ISO (PMID:17873522) RGD PMID:17873522 NCBI chr 2:172,447,738...172,609,591
Ensembl chr 2:170,149,694...170,309,941 		JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in ISO (PMID:18026119) RGD PMID:18026119 NCBI chr 3:126,822,280...126,919,532
Ensembl chr 3:106,368,455...106,467,911 		JBrowse link
G Kdm1a lysine demethylase 1A acts_upstream_of_or_within ISO (PMID:24217620) RGD PMID:24217620 NCBI chr 5:154,066,436...154,121,913
Ensembl chr 5:148,782,976...148,838,319 		JBrowse link
G Mapk13 mitogen activated protein kinase 13 involved_in ISO
IEA		 (PMID:9218798)
GO_REF:0000107		 RGD
Ensembl		 PMID:9218798 GO_REF:0000107 NCBI chr20:6,836,979...6,847,197
Ensembl chr20:6,835,320...6,844,222 		JBrowse link
G Mapk9 mitogen-activated protein kinase 9 IMP RGD PMID:8875991 RGD:2304246 NCBI chr10:34,670,750...34,711,972
Ensembl chr10:34,169,675...34,210,178 		JBrowse link
G Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (PMID:28297716) RGD PMID:28297716 NCBI chr15:27,476,659...27,491,134
Ensembl chr15:25,003,172...25,014,041 		JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor involved_in ISO (PMID:17873522) RGD PMID:17873522 NCBI chr 7:95,483,105...95,488,031
Ensembl chr 7:93,593,705...93,598,630 		JBrowse link
G N4bp1 Nedd4 binding protein 1 involved_in ISO (PMID:17592138) RGD PMID:17592138 NCBI chr19:36,396,082...36,446,835
Ensembl chr19:20,222,776...20,273,570 		JBrowse link
G Nedd4 NEDD4 E3 ubiquitin protein ligase involved_in ISO
IEA		 (PMID:17996703)
GO_REF:0000107		 RGD
Ensembl		 PMID:17996703 GO_REF:0000107 NCBI chr 8:82,264,751...82,349,642
Ensembl chr 8:73,383,695...73,468,951 		JBrowse link
G Nfatc4 nuclear factor of activated T-cells 4 acts_upstream_of_or_within ISO MGI:97583 (PMID:17242187) RGD PMID:17242187 NCBI chr15:33,256,912...33,284,522
Ensembl chr15:29,305,535...29,314,610 		JBrowse link
G Noc2l NOC2-like nucleolar associated transcriptional repressor involved_in ISO (PMID:20959462) RGD PMID:20959462 NCBI chr 5:172,102,369...172,114,168
Ensembl chr 5:166,820,161...166,831,949 		JBrowse link
G Npm1 nucleophosmin 1 involved_in ISO (PMID:19160485) RGD PMID:19160485 NCBI chr10:18,245,739...18,255,913
Ensembl chr10:17,739,941...17,751,645
Ensembl chr  X:17,739,941...17,751,645 		JBrowse link
G Nsmce3 NSE3 homolog, SMC5-SMC6 complex component involved_in ISO (PMID:27427983) RGD PMID:27427983 NCBI chr 1:127,812,572...127,813,899 JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 involved_in ISO (PMID:24289924) RGD PMID:24289924 NCBI chr13:94,839,484...94,871,295
Ensembl chr13:92,307,586...92,339,404 		JBrowse link
G Pbk PDZ binding kinase acts_upstream_of_or_within ISO MGI:5293435 (PMID:21715333) RGD PMID:21715333 NCBI chr15:44,198,506...44,209,572
Ensembl chr15:40,023,002...40,034,014 		JBrowse link
G Pcna proliferating cell nuclear antigen involved_in IEP
ISS
ISO		 GO_REF:0000024
(PMID:24939902)		 UniProt
RGD		 PMID:24939902 PMID:8905661 GO_REF:0000024, RGD:10448977 NCBI chr 3:139,951,948...139,955,820
Ensembl chr 3:119,498,810...119,502,995 		JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:103296|MGI:2149414 (PMID:17242187)		 Ensembl
RGD		 PMID:17242187 GO_REF:0000107 NCBI chr 2:34,612,946...34,697,660
Ensembl chr 2:32,882,032...32,963,631 		JBrowse link
G Pold1 DNA polymerase delta 1, catalytic subunit involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:24939902)		 UniProt
Ensembl
RGD		 PMID:24939902 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:104,161,984...104,178,074
Ensembl chr 1:95,025,499...95,036,465 		JBrowse link
G Polk DNA polymerase kappa involved_in ISO (PMID:28297716) RGD PMID:28297716 NCBI chr 2:29,556,831...29,616,960
Ensembl chr 2:27,822,679...27,882,313 		JBrowse link
G Ppp1r15a protein phosphatase 1, regulatory subunit 15A IEP RGD PMID:9811446 RGD:9999409 NCBI chr 1:105,136,521...105,139,596
Ensembl chr 1:96,000,058...96,003,171 		JBrowse link
G Prkcd protein kinase C, delta involved_in ISO
IEA
ISS		 (PMID:17303575)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:17303575 GO_REF:0000024 GO_REF:0000107 NCBI chr16:5,775,681...5,806,122
Ensembl chr16:5,769,215...5,799,352 		JBrowse link
G Ptn pleiotrophin IEP RGD PMID:17925408 RGD:10044023 NCBI chr 4:66,260,764...66,342,614
Ensembl chr 4:65,293,734...65,375,456 		JBrowse link
G Ptprk protein tyrosine phosphatase, receptor type, K involved_in ISO (PMID:16849327) RGD PMID:16849327 NCBI chr 1:18,557,091...19,056,297
Ensembl chr 1:16,850,576...17,103,605 		JBrowse link
G Rbx1 ring-box 1 involved_in ISO (PMID:22118460) RGD PMID:22118460 NCBI chr 7:114,870,893...114,881,194
Ensembl chr 7:112,990,835...113,001,051 		JBrowse link
G Rhbdd1 rhomboid domain containing 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:19358743)		 UniProt
RGD		 PMID:19358743 GO_REF:0000024 NCBI chr 9:91,076,786...91,196,719
Ensembl chr 9:83,630,063...83,748,689 		JBrowse link
G Rhno1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 involved_in ISO (PMID:21659603) RGD PMID:21659603 NCBI chr 4:163,320,141...163,325,527
Ensembl chr 4:161,634,048...161,639,371 		JBrowse link
G Rnf168 ring finger protein 168 acts_upstream_of_or_within ISO (PMID:24217620) RGD PMID:24217620 NCBI chr11:81,991,352...82,013,306
Ensembl chr11:68,486,321...68,508,277 		JBrowse link
G Rpl26 ribosomal protein L26 involved_in ISO (PMID:16213212) RGD PMID:16213212 NCBI chr10:54,109,692...54,112,822
Ensembl chr10:53,610,421...53,613,966 		JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 involved_in ISO (PMID:18026119) RGD PMID:18026119 NCBI chr 1:105,038,487...105,051,851
Ensembl chr 1:95,901,701...95,915,342 		JBrowse link
G Sde2 SDE2 telomere maintenance homolog involved_in IEA
ISO		 GO_REF:0000107
(PMID:27906959)		 Ensembl
RGD		 PMID:27906959 GO_REF:0000107 NCBI chr13:95,110,598...95,126,929
Ensembl chr13:92,578,874...92,595,140 		JBrowse link
G Smpd1 sphingomyelin phosphodiesterase 1 involved_in ISO (PMID:17303575) RGD PMID:17303575 NCBI chr 1:169,304,772...169,308,615
Ensembl chr 1:159,892,859...159,896,794 		JBrowse link
G Taf1 TATA-box binding protein associated factor 1 involved_in ISO (PMID:24289924) RGD PMID:24289924 NCBI chr  X:70,680,901...70,756,535
Ensembl chr  X:66,640,982...66,716,543 		JBrowse link
G Tmem161a transmembrane protein 161A involved_in ISO (PMID:16551573) RGD PMID:16551573 NCBI chr16:19,272,433...19,282,173
Ensembl chr16:19,238,487...19,248,087 		JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within		 ISO (PMID:16213212), (PMID:23629966)
(PMID:23629966)
MGI:99702 (PMID:14963330)		 RGD PMID:14963330 PMID:16213212 PMID:23629966 NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
G Tp53inp1 tumor protein p53 inducible nuclear protein 1 acts_upstream_of_or_within ISO (PMID:11557757) RGD PMID:11557757 NCBI chr 5:29,051,267...29,069,486
Ensembl chr 5:24,260,568...24,267,968 		JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO (PMID:20511593) RGD PMID:20511593 NCBI chr 8:118,585,082...118,586,382
Ensembl chr 8:109,706,613...109,708,796 		JBrowse link
G Triap1 TP53 regulated inhibitor of apoptosis 1 involved_in ISO (PMID:15735003) RGD PMID:15735003 NCBI chr12:46,928,273...46,930,766
Ensembl chr12:41,267,549...41,270,042 		JBrowse link
G Usp28 ubiquitin specific peptidase 28 involved_in ISO (PMID:17873522) RGD PMID:17873522 NCBI chr 8:58,222,258...58,282,711
Ensembl chr 8:49,325,867...49,386,229 		JBrowse link
G Yy1 YY1 transcription factor involved_in ISO (PMID:18026119) RGD PMID:18026119 NCBI chr 6:133,471,615...133,500,875
Ensembl chr 6:127,707,596...127,732,747 		JBrowse link
G Zbtb1 zinc finger and BTB domain containing 1 involved_in ISO (PMID:24657165) RGD PMID:24657165 NCBI chr 6:100,832,506...100,864,019
Ensembl chr 6:95,096,387...95,118,996 		JBrowse link
cellular response to UV-A term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cers1 ceramide synthase 1 involved_in ISO (PMID:19800881) RGD PMID:19800881 NCBI chr16:19,131,271...19,146,480
Ensembl chr16:19,104,466...19,112,519 		JBrowse link
G Mme membrane metallo-endopeptidase involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:20876573)		 UniProt
Ensembl
RGD		 PMID:20876573 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:149,806,826...149,957,381
Ensembl chr 2:147,722,086...147,803,792 		JBrowse link
G Mmp1 matrix metallopeptidase 1 involved_in ISO (PMID:31380578) RGD PMID:31380578 NCBI chr 8:12,943,453...12,963,966
Ensembl chr 8:4,658,588...4,679,097 		JBrowse link
G Mmp2 matrix metallopeptidase 2 involved_in IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(PMID:31380578)		 Ensembl
UniProt
RGD		 PMID:31380578 GO_REF:0000024 GO_REF:0000107 NCBI chr19:30,327,643...30,355,856
Ensembl chr19:14,154,657...14,182,870 		JBrowse link
G Mmp3 matrix metallopeptidase 3 involved_in ISO
IEA
ISS		 (PMID:31380578)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:31380578 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:12,925,267...12,938,828
Ensembl chr 8:4,640,416...4,653,961 		JBrowse link
G Mmp9 matrix metallopeptidase 9 involved_in ISO
IEA		 (PMID:31380578)
GO_REF:0000107		 RGD
Ensembl		 PMID:31380578 GO_REF:0000107 NCBI chr 3:174,103,474...174,111,434
Ensembl chr 3:153,683,858...153,692,120 		JBrowse link
G Opn1sw opsin 1, short wave sensitive involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:31380578)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:31380578 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:58,942,685...58,945,825
Ensembl chr 4:57,977,313...57,980,457 		JBrowse link
G Opn3 opsin 3 involved_in ISO (PMID:31380578) RGD PMID:31380578 NCBI chr13:90,121,560...90,152,076
Ensembl chr13:87,589,333...87,619,847 		JBrowse link
G Opn5 opsin 5 involved_in ISO (PMID:31380578) RGD PMID:31380578 NCBI chr 9:25,865,610...25,913,315
Ensembl chr 9:18,368,416...18,415,476 		JBrowse link
G Ppid peptidylprolyl isomerase D involved_in ISS
ISO		 GO_REF:0000024
(PMID:23220213)		 UniProt
RGD		 PMID:23220213 GO_REF:0000024 NCBI chr 2:167,025,985...167,037,998
Ensembl chr 2:164,727,779...164,740,221 		JBrowse link
G Timp1 TIMP metallopeptidase inhibitor 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:31380578)		 UniProt
RGD		 PMID:31380578 GO_REF:0000024 NCBI chr  X:3,766,509...3,772,578
Ensembl chr  X:1,212,972...1,217,664 		JBrowse link
cellular response to UV-B term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdkn1a cyclin-dependent kinase inhibitor 1A involved_in ISO (PMID:25329316) RGD PMID:25329316 NCBI chr20:7,150,820...7,161,373
Ensembl chr20:7,149,217...7,159,585 		JBrowse link
G Crip1 cysteine rich protein 1 involved_in ISO
ISS		 (PMID:20415737) RGD PMID:20415737 PMID:20415737 RGD:8553326 NCBI chr 6:138,047,801...138,055,672
Ensembl chr 6:132,226,746...132,234,620 		JBrowse link
G Hyal1 hyaluronidase 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:21699545)		 UniProt
Ensembl
RGD		 PMID:21699545 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:117,129,311...117,133,162
Ensembl chr 8:108,250,667...108,260,210 		JBrowse link
G Hyal2 hyaluronidase 2 involved_in ISO
ISS
IEA		 (PMID:21699545)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:21699545 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:117,121,802...117,125,494
Ensembl chr 8:108,243,133...108,246,850 		JBrowse link
G Hyal3 hyaluronidase 3 involved_in ISO
IEA		 (PMID:21699545)
GO_REF:0000107		 RGD
Ensembl		 PMID:21699545 GO_REF:0000107 NCBI chr 8:117,133,028...117,138,663
Ensembl chr 8:108,250,667...108,260,647 		JBrowse link
G Map3k20 mitogen-activated protein kinase kinase kinase 20 involved_in ISS
ISO		 GO_REF:0000024
(PMID:35857590)
(PMID:32289254)		 UniProt
RGD		 PMID:32289254 PMID:35857590 GO_REF:0000024 NCBI chr 3:77,538,146...77,697,540
Ensembl chr 3:57,130,551...57,289,626 		JBrowse link
G Mapk11 mitogen-activated protein kinase 11 involved_in ISO (PMID:35857590) RGD PMID:35857590 NCBI chr 7:122,098,120...122,105,023
Ensembl chr 7:120,218,478...120,225,395 		JBrowse link
G Mapk14 mitogen activated protein kinase 14 involved_in IEA
ISO		 GO_REF:0000107
(PMID:35857590)		 Ensembl
RGD		 PMID:35857590 GO_REF:0000107 NCBI chr20:6,751,288...6,812,294
Ensembl chr20:6,749,670...6,810,589 		JBrowse link
G Mfap4 microfibril associated protein 4 involved_in ISO (PMID:22355679) RGD PMID:22355679 NCBI chr10:46,666,552...46,669,613
Ensembl chr10:46,167,217...46,170,155 		JBrowse link
G Mme membrane metallo-endopeptidase involved_in ISO
IEA
ISS		 (PMID:20876573)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:20876573 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:149,806,826...149,957,381
Ensembl chr 2:147,722,086...147,803,792 		JBrowse link
G Nlrp1a NLR family, pyrin domain containing 1A involved_in ISO (PMID:30096351) RGD PMID:30096351 NCBI chr10:56,277,134...56,332,229
Ensembl chr10:55,778,560...55,825,180 		JBrowse link
G Rpl13a ribosomal protein L13A IEP RGD PMID:10483362 RGD:11036101 NCBI chr 1:104,746,223...104,748,975
Ensembl chr 1:95,609,370...95,620,463 		JBrowse link
G Rpl35 ribosomal protein L35 IEP RGD PMID:10483362 RGD:11036101 NCBI chr 3:43,162,960...43,166,485
Ensembl chr 3:22,753,253...22,756,243 		JBrowse link
G Stk11 serine/threonine kinase 11 involved_in ISO (PMID:25329316) RGD PMID:25329316 NCBI chr 7:10,225,204...10,241,965
Ensembl chr 7:9,575,269...9,591,315 		JBrowse link
cellular response to UV-C term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ei24 EI24, autophagy associated transmembrane protein acts_upstream_of_or_within ISO MGI:98834 (PMID:24014029) RGD PMID:24014029 NCBI chr 8:44,683,138...44,699,502
Ensembl chr 8:36,494,289...36,510,571 		JBrowse link
G Mdm2 MDM2 proto-oncogene IEP RGD PMID:14558917 RGD:2317408 NCBI chr 7:55,176,558...55,201,757
Ensembl chr 7:53,290,664...53,314,915 		JBrowse link
G Pierce1 piercer of microtubule wall 1 acts_upstream_of_or_within ISO (PMID:21159655) RGD PMID:21159655 NCBI chr 3:32,195,024...32,201,111
Ensembl chr 3:11,797,031...11,801,568 		JBrowse link
G Polh DNA polymerase eta acts_upstream_of_or_within ISO MGI:1347081|MGI:3614412 (PMID:17114294) RGD PMID:17114294 NCBI chr 9:22,275,929...22,310,576
Ensembl chr 9:14,777,888...14,812,723 		JBrowse link
G Poli DNA polymerase iota acts_upstream_of_or_within ISO MGI:1891457|MGI:3055735 (PMID:17114294) RGD PMID:17114294 NCBI chr18:66,389,214...66,409,734
Ensembl chr18:64,116,774...64,163,418 		JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:108090 (PMID:24014029)		 Ensembl
RGD		 PMID:24014029 GO_REF:0000107 NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
cellular response to X-ray term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase involved_in ISO (PMID:26323318) RGD PMID:26323318 NCBI chr 8:62,724,939...62,829,040
Ensembl chr 8:53,831,093...53,932,437 		JBrowse link
G Ccnd2 cyclin D2 acts_upstream_of_or_within ISO MGI:2180642 (PMID:23714078) RGD PMID:23714078 NCBI chr 4:161,653,048...161,675,422
Ensembl chr 4:159,962,363...159,989,495 		JBrowse link
G Dbn1 drebrin 1 IEP RGD PMID:23578130 RGD:10398817 NCBI chr17:9,155,729...9,170,121
Ensembl chr17:9,150,659...9,164,984 		JBrowse link
G Dnm2 dynamin 2 IEP RGD PMID:15994918 RGD:9685147 NCBI chr 8:28,254,344...28,336,297
Ensembl chr 8:19,978,400...20,060,157 		JBrowse link
G Hamp hepcidin antimicrobial peptide IEP RGD PMID:17090718 RGD:11041722 NCBI chr 1:95,298,332...95,300,271
Ensembl chr 1:86,170,901...86,172,891 		JBrowse link
G Kat5 lysine acetyltransferase 5 IEP RGD PMID:15985650 RGD:2316135 NCBI chr 1:212,325,089...212,332,640
Ensembl chr 1:202,895,751...202,903,458 		JBrowse link
G Lcn2 lipocalin 2 IEP RGD PMID:23331620 RGD:126790570 NCBI chr 3:36,078,432...36,081,851
Ensembl chr 3:15,680,687...15,684,095 		JBrowse link
G Nipbl NIPBL, cohesin loading factor involved_in ISO (PMID:17468178) RGD PMID:17468178 NCBI chr 2:59,126,676...59,314,841
Ensembl chr 2:57,399,445...57,565,899 		JBrowse link
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 involved_in ISO (PMID:26323318) RGD PMID:26323318 NCBI chr13:45,897,275...45,926,491
Ensembl chr13:43,345,115...43,370,229 		JBrowse link
G Prap1 proline-rich acidic protein 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:32629119)		 UniProt
RGD		 PMID:32629119 GO_REF:0000024 NCBI chr 1:204,312,723...204,316,519
Ensembl chr 1:194,883,078...194,886,872 		JBrowse link
G Sfrp1 secreted frizzled-related protein 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:19778523)		 Ensembl
RGD		 PMID:19778523 GO_REF:0000107 NCBI chr16:75,278,325...75,316,736
Ensembl chr16:68,575,763...68,614,286 		JBrowse link
G Sfrp2 secreted frizzled-related protein 2 involved_in ISO (PMID:19778523) RGD PMID:19778523 NCBI chr 2:171,387,536...171,395,081
Ensembl chr 2:169,089,517...169,097,063 		JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 IEP RGD PMID:21915754 RGD:9586753 NCBI chr 3:128,620,320...128,724,716
Ensembl chr 3:108,169,980...108,269,822 		JBrowse link
G Xrcc5 X-ray repair cross complementing 5 IDA RGD PMID:11966321 RGD:727219 NCBI chr 9:81,404,507...81,493,293
Ensembl chr 9:73,955,216...74,044,018 		JBrowse link
G Xrcc6 X-ray repair cross complementing 6 IDA RGD PMID:11175667 RGD:2317102 NCBI chr 7:115,423,026...115,443,884
Ensembl chr 7:113,543,057...113,563,762 		JBrowse link
cone photoresponse recovery term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc24a4 solute carrier family 24 member 4 involved_in ISO (PMID:28650316) RGD PMID:28650316 NCBI chr 6:127,044,470...127,184,684
Ensembl chr 6:121,280,031...121,414,949 		JBrowse link
dark adaptation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gnb5 G protein subunit beta 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:23555598)		 Ensembl
RGD		 PMID:23555598 GO_REF:0000107 NCBI chr 8:84,956,629...84,985,576
Ensembl chr 8:76,073,306...76,105,069 		JBrowse link
G Rgs9 regulator of G-protein signaling 9 acts_upstream_of_or_within ISO (PMID:23555598) RGD PMID:23555598 NCBI chr10:94,696,556...94,770,387
Ensembl chr10:94,197,054...94,270,892 		JBrowse link
G Tent2 terminal nucleotidyltransferase 2 IEP RGD PMID:23700402 RGD:11041783 NCBI chr 2:26,115,150...26,167,465
Ensembl chr 2:24,380,225...24,432,099 		JBrowse link
detection of light stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gnat1 G protein subunit alpha transducin 1 acts_upstream_of_or_within ISO MGI:2152779|MGI:95779 (PMID:19815523) RGD PMID:19815523 NCBI chr 8:117,229,575...117,234,311
Ensembl chr 8:108,350,935...108,355,671 		JBrowse link
G Gnat2 G protein subunit alpha transducin 2 acts_upstream_of_or_within ISO MGI:3588845|MGI:95778 (PMID:19815523) RGD PMID:19815523 NCBI chr 2:198,414,568...198,431,532
Ensembl chr 2:195,726,762...195,735,866 		JBrowse link
G Pde6b phosphodiesterase 6B acts_upstream_of_or_within ISO MGI:1856373 (PMID:11747369) RGD PMID:11747369 NCBI chr14:1,468,302...1,511,435
Ensembl chr14:1,323,310...1,366,450 		JBrowse link
G Rho rhodopsin acts_upstream_of_or_within ISO MGI:2181812 (PMID:11747369) RGD PMID:11747369 NCBI chr 4:150,653,205...150,658,367
Ensembl chr 4:148,980,611...148,985,773 		JBrowse link
detection of light stimulus involved in visual perception term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp8a2 ATPase phospholipid transporting 8A2 involved_in ISO (PMID:24413176) RGD PMID:24413176 NCBI chr15:37,993,507...38,526,408
Ensembl chr15:33,819,755...34,350,223 		JBrowse link
G Best1 bestrophin 1 acts_upstream_of_or_within ISO MGI:3795281 (PMID:16636205) RGD PMID:16636205 NCBI chr 1:216,054,395...216,071,012
Ensembl chr 1:206,629,500...206,646,063 		JBrowse link
G Cacna1f calcium voltage-gated channel subunit alpha1 F involved_in ISO (PMID:7571473) RGD PMID:7571473 NCBI chr  X:17,539,992...17,568,308
Ensembl chr  X:14,868,024...14,896,413 		JBrowse link
G Cacna2d4 calcium voltage-gated channel auxiliary subunit alpha2delta 4 involved_in ISO (PMID:17033974) RGD PMID:17033974 NCBI chr 4:154,080,877...154,197,369
Ensembl chr 4:152,408,657...152,521,268 		JBrowse link
G Cacnb4 calcium voltage-gated channel auxiliary subunit beta 4 acts_upstream_of_or_within ISO MGI:1856936 (PMID:16636205) RGD PMID:16636205 NCBI chr 3:57,315,900...57,578,271
Ensembl chr 3:36,910,427...37,168,944 		JBrowse link
G Ccdc66 coiled-coil domain containing 66 involved_in ISO (PMID:21680557) RGD PMID:21680557 NCBI chr16:2,668,810...2,700,717
Ensembl chr16:2,662,131...2,694,023 		JBrowse link
G Cep250 centrosomal protein 250 involved_in ISO (PMID:30998843) RGD PMID:30998843 NCBI chr 3:164,931,033...164,976,210
Ensembl chr 3:144,471,214...144,516,125 		JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 involved_in ISO (PMID:15557452) RGD PMID:15557452 NCBI chr19:9,732,646...9,798,864
Ensembl chr19:9,726,595...9,791,173 		JBrowse link
G Crb1 crumbs cell polarity complex component 1 acts_upstream_of_or_within ISO (PMID:22447858) RGD PMID:22447858 NCBI chr13:53,352,932...53,540,019
Ensembl chr13:50,800,959...50,989,261 		JBrowse link
G Gja10 gap junction protein, alpha 10 acts_upstream_of_or_within ISO MGI:3043946 (PMID:16820008) RGD PMID:16820008 NCBI chr 5:51,787,407...51,799,827
Ensembl chr 5:46,992,946...46,996,570 		JBrowse link
G Gnat1 G protein subunit alpha transducin 1 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:17584859)
MGI:2152779 (PMID:18171936)
GO_REF:0000033		 RGD
GO_Central		 PMID:17584859 PMID:18171936 GO_REF:0000033 NCBI chr 8:117,229,575...117,234,311
Ensembl chr 8:108,350,935...108,355,671 		JBrowse link
G Gnat2 G protein subunit alpha transducin 2 involved_in
acts_upstream_of_or_within		 ISO (PMID:12077706)
MGI:3588845 (PMID:17065522)		 RGD PMID:12077706 PMID:17065522 NCBI chr 2:198,414,568...198,431,532
Ensembl chr 2:195,726,762...195,735,866 		JBrowse link
G Gnat3 G protein subunit alpha transducin 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:18,054,551...18,104,332
Ensembl chr 4:17,162,490...17,212,283 		JBrowse link
G Grm6 glutamate metabotropic receptor 6 involved_in ISS
ISO		 GO_REF:0000024
(PMID:17405131)		 UniProt
RGD		 PMID:17405131 GO_REF:0000024 NCBI chr10:35,669,003...35,683,729
Ensembl chr10:35,167,985...35,182,717 		JBrowse link
G Gucy2f guanylate cyclase 2F involved_in ISO (PMID:17255100) RGD PMID:17255100 NCBI chr  X:110,507,183...110,605,017
Ensembl chr  X:105,710,356...105,808,183 		JBrowse link
G Prph2 peripherin 2 acts_upstream_of_or_within ISO MGI:1856523|MGI:6367783|MGI:6367794|MGI:97998 (PMID:26420485), (PMID:28053051) RGD PMID:26420485 PMID:28053051 NCBI chr 9:21,563,770...21,579,074
Ensembl chr 9:14,066,156...14,081,454 		JBrowse link
G Rbp4 retinol binding protein 4 acts_upstream_of_or_within ISO MGI:2445721 (PMID:12484775) RGD PMID:12484775 NCBI chr 1:245,306,349...245,313,551
Ensembl chr 1:235,893,917...235,901,399 		JBrowse link
G Reep6 receptor accessory protein 6 involved_in ISO
ISS		 (PMID:27889058)
GO_REF:0000024		 RGD
UniProt		 PMID:27889058 GO_REF:0000024 NCBI chr 7:10,024,601...10,031,507
Ensembl chr 7:9,373,927...9,380,597 		JBrowse link
G Rgs9bp regulator of G protein signaling 9 binding protein involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:3028628 (PMID:14625292)		 GO_Central
RGD		 PMID:14625292 GO_REF:0000033 NCBI chr 1:97,386,326...97,387,039
Ensembl chr 1:88,249,438...88,250,151 		JBrowse link
G Rom1 retinal outer segment membrane protein 1 acts_upstream_of_or_within ISO MGI:102791 (PMID:28053051) RGD PMID:28053051 NCBI chr 1:215,253,155...215,255,163
Ensembl chr 1:205,824,052...205,826,175 		JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 involved_in ISO (PMID:15557452) RGD PMID:15557452 NCBI chr 2:251,425,228...251,457,209
Ensembl chr 2:248,766,612...248,798,403 		JBrowse link
G Rpgrip1 RPGR interacting protein 1 involved_in ISO (PMID:21521437) RGD PMID:21521437 NCBI chr15:27,282,997...27,341,021
Ensembl chr15:24,814,614...24,868,605 		JBrowse link
G Sema5a semaphorin 5A acts_upstream_of_or_within ISO MGI:107555 (PMID:21835343) RGD PMID:21835343 NCBI chr 2:85,020,724...85,451,938
Ensembl chr 2:83,309,843...83,741,084 		JBrowse link
G Sema5b semaphorin 5B acts_upstream_of_or_within ISO MGI:107556 (PMID:21835343) RGD PMID:21835343 NCBI chr11:78,607,805...78,730,724
Ensembl chr11:65,102,031...65,225,311 		JBrowse link
G Tulp1 TUB like protein 1 involved_in ISO (PMID:15557452) RGD PMID:15557452 NCBI chr20:6,413,901...6,425,833
Ensembl chr20:6,412,171...6,424,073 		JBrowse link
detection of UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fech ferrochelatase acts_upstream_of_or_within ISO MGI:2384729 (PMID:12149233) RGD PMID:12149233 NCBI chr18:60,215,325...60,248,525
Ensembl chr18:57,945,122...57,979,348 		JBrowse link
detection of visible light term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpr52 G protein-coupled receptor 52 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr13:75,333,683...75,338,407
Ensembl chr13:72,800,127...72,806,180 		JBrowse link
G Gpr88 G-protein coupled receptor 88 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:206,876,373...206,885,034
Ensembl chr 2:204,191,427...204,199,733 		JBrowse link
G Irx6 iroquois homeobox 6 acts_upstream_of_or_within ISO MGI:5448232 (PMID:23172916) RGD PMID:23172916 NCBI chr19:30,503,416...30,509,396
Ensembl chr19:14,330,440...14,336,403 		JBrowse link
G Opn1mw opsin 1, medium wave sensitive involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:157,056,355...157,076,716
Ensembl chr  X:151,905,096...151,925,388 		JBrowse link
G Opn1sw opsin 1, short wave sensitive involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:58,942,685...58,945,825
Ensembl chr 4:57,977,313...57,980,457 		JBrowse link
G Opn3 opsin 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr13:90,121,560...90,152,076
Ensembl chr13:87,589,333...87,619,847 		JBrowse link
G Opn4 opsin 4 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr16:9,926,638...9,935,810
Ensembl chr16:9,920,491...10,005,711 		JBrowse link
G Opn5 opsin 5 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 9:25,865,610...25,913,315
Ensembl chr 9:18,368,416...18,415,476 		JBrowse link
G Rgr retinal G protein coupled receptor involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr16:12,821,858...12,836,665
Ensembl chr16:12,801,594...12,816,223 		JBrowse link
G Rrh retinal pigment epithelium derived rhodopsin homolog involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:221,036,436...221,048,627
Ensembl chr 2:218,362,200...218,374,599 		JBrowse link
DNA synthesis involved in UV-damage excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pola1 DNA polymerase alpha 1, catalytic subunit NOT|involved_in ISO
ISS		 (PMID:1730053)
GO_REF:0000024		 RGD
UniProt		 PMID:1730053 GO_REF:0000024 NCBI chr  X:62,028,475...62,342,455
Ensembl chr  X:58,034,619...58,348,536 		JBrowse link
G Pold3 DNA polymerase delta 3, accessory subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:163,830,217...163,870,015
Ensembl chr 1:154,418,084...154,456,665 		JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO MGI:3052754 (PMID:23993650) RGD PMID:23993650 NCBI chr 8:118,585,082...118,586,382
Ensembl chr 8:109,706,613...109,708,796 		JBrowse link
entrainment of circadian clock by photoperiod term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aanat aralkylamine N-acetyltransferase TAS RGD PMID:8770929 RGD:1298540 NCBI chr10:102,323,647...102,330,639
Ensembl chr10:101,827,301...101,831,801 		JBrowse link
G Atoh7 atonal bHLH transcription factor 7 involved_in ISO (PMID:26392540) RGD PMID:26392540 NCBI chr20:25,529,528...25,529,977
Ensembl chr20:25,530,826...25,531,275 		JBrowse link
G Bhlhe40 basic helix-loop-helix family, member e40 involved_in IEA
ISO		 GO_REF:0000107
(PMID:18411297)		 Ensembl
RGD		 PMID:18411297 GO_REF:0000107 NCBI chr 4:143,174,450...143,180,150
Ensembl chr 4:141,618,476...141,624,774 		JBrowse link
G Crtc1 CREB regulated transcription coactivator 1 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:23993098)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:23993098 GO_REF:0000024 GO_REF:0000107 NCBI chr16:19,022,171...19,080,880
Ensembl chr16:18,988,250...19,043,381 		JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in ISS
ISO
IBA		 GO_REF:0000024
(PMID:23616524)
GO_REF:0000033		 UniProt
RGD
GO_Central		 PMID:23616524 GO_REF:0000024 GO_REF:0000033 NCBI chr 7:20,417,526...20,481,791
Ensembl chr 7:18,529,823...18,594,091 		JBrowse link
G Cry2 cryptochrome circadian regulator 2 involved_in ISS
IEA
ISO
IBA		 GO_REF:0000024
GO_REF:0000107
(PMID:23616524)
GO_REF:0000033		 UniProt
Ensembl
RGD
GO_Central		 PMID:23616524 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:98,830,479...98,860,437
Ensembl chr 3:78,374,995...78,404,965 		JBrowse link
G Fbxl21 F-box and leucine-rich repeat protein 21 involved_in IBA
ISO		 GO_REF:0000033
(PMID:23452855), (PMID:23452856)		 GO_Central
RGD		 PMID:23452855 PMID:23452856 GO_REF:0000033 NCBI chr17:8,063,731...8,082,920
Ensembl chr17:8,060,414...8,073,359 		JBrowse link
G Fbxl3 F-box and leucine-rich repeat protein 3 involved_in IBA
ISO		 GO_REF:0000033
(PMID:23452855), (PMID:23452856), (PMID:23616524)		 GO_Central
RGD		 PMID:23452855 PMID:23452856 PMID:23616524 GO_REF:0000033 NCBI chr15:86,321,504...86,341,387
Ensembl chr15:79,906,795...79,927,867 		JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:19217292)		 UniProt
RGD		 PMID:19217292 GO_REF:0000024 NCBI chr 6:47,469,162...47,470,995
Ensembl chr 6:41,728,946...41,744,400 		JBrowse link
G Mta1 metastasis associated 1 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:24089055)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:24089055 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:137,999,845...138,038,696
Ensembl chr 6:132,178,853...132,217,641 		JBrowse link
G Nr2f6 nuclear receptor subfamily 2, group F, member 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3574037 (PMID:15741322)		 Ensembl
RGD		 PMID:15741322 GO_REF:0000107 NCBI chr16:18,080,003...18,087,449
Ensembl chr16:18,046,013...18,053,459 		JBrowse link
G Opn5 opsin 5 involved_in ISO (PMID:26392540), (PMID:30240620), (PMID:31607531) RGD PMID:26392540 PMID:30240620 PMID:31607531 NCBI chr 9:25,865,610...25,913,315
Ensembl chr 9:18,368,416...18,415,476 		JBrowse link
G Pde6b phosphodiesterase 6B involved_in ISO (PMID:30240620) RGD PMID:30240620 NCBI chr14:1,468,302...1,511,435
Ensembl chr14:1,323,310...1,366,450 		JBrowse link
G Per1 period circadian regulator 1 involved_in IEA
IBA
ISO
ISS		 GO_REF:0000107
GO_REF:0000033
(PMID:15888647)
GO_REF:0000024		 Ensembl
GO_Central
RGD
UniProt		 PMID:15888647 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr10:54,299,002...54,313,804
Ensembl chr10:53,805,535...53,814,431 		JBrowse link
G Per2 period circadian regulator 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:99,454,828...99,497,069
Ensembl chr 9:92,007,296...92,049,459 		JBrowse link
G Per3 period circadian regulator 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:166,740,914...166,778,243
Ensembl chr 5:161,459,533...161,495,607 		JBrowse link
G Pml PML nuclear body scaffold involved_in ISO (PMID:22274616) RGD PMID:22274616 NCBI chr 8:67,523,164...67,557,801
Ensembl chr 8:58,628,837...58,658,971 		JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha involved_in ISS
ISO		 GO_REF:0000024
(PMID:21712997)		 UniProt
RGD		 PMID:21712997 GO_REF:0000024 NCBI chr 1:210,914,576...210,918,193
Ensembl chr 1:201,485,085...201,497,327 		JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta involved_in ISS
ISO		 GO_REF:0000024
(PMID:21712997)		 UniProt
RGD		 PMID:21712997 GO_REF:0000024 NCBI chr 6:29,681,099...29,712,835
Ensembl chr 6:23,960,998...23,992,824 		JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma involved_in ISS
ISO		 GO_REF:0000024
(PMID:21712997)		 UniProt
RGD		 PMID:21712997 GO_REF:0000024 NCBI chr12:40,043,822...40,061,301
Ensembl chr12:34,383,072...34,400,553 		JBrowse link
G Rbm4 RNA binding motif protein 4 involved_in ISO (PMID:17264215) RGD PMID:17264215 NCBI chr 1:211,507,845...211,516,907
Ensembl chr 1:202,085,279...202,105,380 		JBrowse link
G Rbm4b RNA binding motif protein 4B involved_in ISS
ISO		 GO_REF:0000024
(PMID:17264215)		 UniProt
RGD		 PMID:17264215 GO_REF:0000024 NCBI chr 1:211,477,337...211,487,428
Ensembl chr 1:202,047,927...202,058,020 		JBrowse link
G Sik1 salt-inducible kinase 1 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:23993098)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:23993098 GO_REF:0000024 GO_REF:0000107 NCBI chr20:9,947,104...9,958,729
Ensembl chr20:9,947,396...9,958,991 		JBrowse link
G Tp53 tumor protein p53 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:24051492)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:24051492 GO_REF:0000024 GO_REF:0000107 NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:23213472)		 UniProt
RGD		 PMID:23213472 GO_REF:0000024 NCBI chr 8:53,308,264...53,336,800
Ensembl chr 8:44,411,607...44,438,331 		JBrowse link
G protein-coupled opsin signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gnat1 G protein subunit alpha transducin 1 IMP RGD PMID:11931744 RGD:1599009 NCBI chr 8:117,229,575...117,234,311
Ensembl chr 8:108,350,935...108,355,671 		JBrowse link
G Grk1 G protein-coupled receptor kinase 1 TAS RGD PMID:9147475 RGD:729748 NCBI chr16:82,821,184...82,837,971
Ensembl chr16:76,123,842...76,135,792 		JBrowse link
G Pcp2 Purkinje cell protein 2 acts_upstream_of_or_within ISO MGI:3579782 (PMID:18768681) RGD PMID:18768681 NCBI chr12:6,479,554...6,481,550
Ensembl chr12:1,681,659...1,683,899 		JBrowse link
G Rho rhodopsin IDA RGD PMID:8814134 RGD:6893595 NCBI chr 4:150,653,205...150,658,367
Ensembl chr 4:148,980,611...148,985,773 		JBrowse link
light adaption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Frmpd1 FERM and PDZ domain containing 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:36787362)
GO_REF:0000107		 RGD
Ensembl		 PMID:36787362 GO_REF:0000107 NCBI chr 5:64,238,730...64,340,778
Ensembl chr 5:59,443,076...59,545,080 		JBrowse link
G Gnb5 G protein subunit beta 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:23555598)		 Ensembl
RGD		 PMID:23555598 GO_REF:0000107 NCBI chr 8:84,956,629...84,985,576
Ensembl chr 8:76,073,306...76,105,069 		JBrowse link
G Rgs9 regulator of G-protein signaling 9 acts_upstream_of_or_within ISO (PMID:23555598) RGD PMID:23555598 NCBI chr10:94,696,556...94,770,387
Ensembl chr10:94,197,054...94,270,892 		JBrowse link
long-day photoperiodism term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agrp agouti related neuropeptide IEP RGD PMID:19490367 RGD:6480663 NCBI chr19:50,357,899...50,396,758
Ensembl chr19:33,447,992...33,449,584 		JBrowse link
negative regulation of response to gamma radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prkdc protein kinase, DNA-activated, catalytic subunit IMP RGD PMID:22981234 RGD:8696027 NCBI chr11:98,544,952...98,762,499
Ensembl chr11:85,040,792...85,257,952 		JBrowse link
optokinetic behavior term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxa1 homeobox A1 involved_in ISO (PMID:16155570) RGD PMID:16155570 NCBI chr 4:82,586,505...82,589,209
Ensembl chr 4:81,255,883...81,258,504 		JBrowse link
G Opn4 opsin 4 involved_in ISS
ISO		 GO_REF:0000024
(PMID:26392540)		 UniProt
RGD		 PMID:26392540 GO_REF:0000024 NCBI chr16:9,926,638...9,935,810
Ensembl chr16:9,920,491...10,005,711 		JBrowse link
photoperiodism term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aanat aralkylamine N-acetyltransferase IDA RGD PMID:12358739 RGD:628397 NCBI chr10:102,323,647...102,330,639
Ensembl chr10:101,827,301...101,831,801 		JBrowse link
G Drd4 dopamine receptor D4 IEP RGD PMID:18321474 RGD:2301031 NCBI chr 1:205,825,937...205,829,124
Ensembl chr 1:196,396,366...196,399,553 		JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit IEP RGD PMID:16962714 RGD:2293767 NCBI chr 6:30,017,952...30,039,269
Ensembl chr 6:24,300,956...24,320,034 		JBrowse link
G Nmu neuromedin U IEP RGD PMID:17726140 RGD:1642120 NCBI chr14:32,198,789...32,226,397
Ensembl chr14:31,844,728...31,872,192 		JBrowse link
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 IEP RGD PMID:21076970 RGD:10448986 NCBI chr10:84,224,599...84,231,812
Ensembl chr10:83,728,318...83,735,705 		JBrowse link
phototransduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arrb1 arrestin, beta 1 acts_upstream_of_or_within ISO MGI:2388373 (PMID:11853756) RGD PMID:11853756 NCBI chr 1:163,249,654...163,321,711
Ensembl chr 1:153,838,078...153,904,061 		JBrowse link
G Asic2 acid sensing ion channel subunit 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3043849 (PMID:14762118)		 Ensembl
RGD		 PMID:14762118 GO_REF:0000107 NCBI chr10:66,368,308...67,438,237
Ensembl chr10:65,870,594...66,940,424 		JBrowse link
G Cabp4 calcium binding protein 4 acts_upstream_of_or_within ISO MGI:3056615 (PMID:16249514) RGD PMID:16249514 NCBI chr 1:210,857,223...210,872,431
Ensembl chr 1:201,428,672...201,433,172 		JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 acts_upstream_of_or_within ISO MGI:3527896 (PMID:15634774) RGD PMID:15634774 NCBI chr19:9,732,646...9,798,864
Ensembl chr19:9,726,595...9,791,173 		JBrowse link
G Gnat1 G protein subunit alpha transducin 1 acts_upstream_of_or_within ISO MGI:2152779 (PMID:11095744), (PMID:11853756), (PMID:15073279), (PMID:16249514), (PMID:17881533), (PMID:18367617) RGD PMID:11095744 PMID:11853756 PMID:15073279 PMID:16249514 PMID:17881533 More... NCBI chr 8:117,229,575...117,234,311
Ensembl chr 8:108,350,935...108,355,671 		JBrowse link
G Gnat2 G protein subunit alpha transducin 2 acts_upstream_of_or_within ISO MGI:3588845|MGI:5051274 (PMID:17408617), (PMID:18171936), (PMID:29518352) RGD PMID:17408617 PMID:18171936 PMID:29518352 NCBI chr 2:198,414,568...198,431,532
Ensembl chr 2:195,726,762...195,735,866 		JBrowse link
G Gngt1 G protein subunit gamma transducin 1 acts_upstream_of_or_within ISO MGI:3783323 (PMID:18367617) RGD PMID:18367617 NCBI chr 4:32,960,945...32,963,930
Ensembl chr 4:32,006,267...32,009,252 		JBrowse link
G Gpr52 G protein-coupled receptor 52 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:75,333,683...75,338,407
Ensembl chr13:72,800,127...72,806,180 		JBrowse link
G Gpr88 G-protein coupled receptor 88 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:206,876,373...206,885,034
Ensembl chr 2:204,191,427...204,199,733 		JBrowse link
G Guca1a guanylate cyclase activator 1A acts_upstream_of_or_within ISO MGI:2664159 (PMID:11493703), (PMID:15173221) RGD PMID:11493703 PMID:15173221 NCBI chr 9:21,080,782...21,096,221
Ensembl chr 9:13,588,525...13,598,565 		JBrowse link
G Guca1b guanylate cyclase activator 1B acts_upstream_of_or_within ISO MGI:2664160 (PMID:11493703), (PMID:15173221) RGD PMID:11493703 PMID:15173221 NCBI chr 9:21,097,274...21,105,107
Ensembl chr 9:13,599,619...13,607,455 		JBrowse link
G Lrit1 leucine-rich repeat, Ig-like and transmembrane domains 1 acts_upstream_of_or_within ISO (PMID:29590623) RGD PMID:29590623 NCBI chr16:12,842,339...12,850,266
Ensembl chr16:12,822,076...12,831,772 		JBrowse link
G Opn1mw opsin 1, medium wave sensitive involved_in IEA
IBA		 GO_REF:0000043
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000043 NCBI chr  X:157,056,355...157,076,716
Ensembl chr  X:151,905,096...151,925,388 		JBrowse link
G Opn1sw opsin 1, short wave sensitive involved_in IEA
IBA		 GO_REF:0000043
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000043 NCBI chr 4:58,942,685...58,945,825
Ensembl chr 4:57,977,313...57,980,457 		JBrowse link
G Opn3 opsin 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:90,121,560...90,152,076
Ensembl chr13:87,589,333...87,619,847 		JBrowse link
G Opn4 opsin 4 involved_in IDA
IBA
ISO
IEA		 GO_REF:0000033
(PMID:12808468)
GO_REF:0000043
(PMID:15674244)		 GO_Central
RGD
UniProt		 PMID:12808468 PMID:15674244 PMID:11834834 GO_REF:0000033 GO_REF:0000043, RGD:633348 NCBI chr16:9,926,638...9,935,810
Ensembl chr16:9,920,491...10,005,711 		JBrowse link
G Opn5 opsin 5 involved_in ISO
IBA		 (PMID:30936473)
GO_REF:0000033		 RGD
GO_Central		 PMID:30936473 GO_REF:0000033 NCBI chr 9:25,865,610...25,913,315
Ensembl chr 9:18,368,416...18,415,476 		JBrowse link
G Plcb4 phospholipase C, beta 4 NAS RGD PMID:7688223 RGD:633574 NCBI chr 3:143,405,721...143,775,129
Ensembl chr 3:122,953,196...123,322,392 		JBrowse link
G Rcvrn recoverin acts_upstream_of_or_within ISO MGI:3584102 (PMID:15173221) RGD PMID:15173221 NCBI chr10:52,887,667...52,895,413
Ensembl chr10:52,388,706...52,396,453 		JBrowse link
G Rgr retinal G protein coupled receptor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:12,821,858...12,836,665
Ensembl chr16:12,801,594...12,816,223 		JBrowse link
G Rho rhodopsin acts_upstream_of_or_within
involved_in		 ISO
IBA
IEA		 MGI:2181812 (PMID:16723493)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:16723493 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:150,653,205...150,658,367
Ensembl chr 4:148,980,611...148,985,773 		JBrowse link
G Rrh retinal pigment epithelium derived rhodopsin homolog involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:221,036,436...221,048,627
Ensembl chr 2:218,362,200...218,374,599 		JBrowse link
G Slc24a4 solute carrier family 24 member 4 acts_upstream_of ISO (PMID:28650316) RGD PMID:28650316 NCBI chr 6:127,044,470...127,184,684
Ensembl chr 6:121,280,031...121,414,949 		JBrowse link
phototransduction, UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Opn5 opsin 5 involved_in ISO (PMID:22043319) RGD PMID:22043319 NCBI chr 9:25,865,610...25,913,315
Ensembl chr 9:18,368,416...18,415,476 		JBrowse link
phototransduction, visible light term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aipl1 aryl hydrocarbon receptor-interacting protein-like 1 acts_upstream_of_or_within ISO MGI:3054784 (PMID:15365173) RGD PMID:15365173 NCBI chr10:57,154,226...57,163,455
Ensembl chr10:56,655,693...56,664,922 		JBrowse link
G Chrm1 cholinergic receptor, muscarinic 1 involved_in ISO (PMID:12196552) RGD PMID:12196552 NCBI chr 1:214,996,180...215,012,136
Ensembl chr 1:205,567,220...205,582,356 		JBrowse link
G Gnat1 G protein subunit alpha transducin 1 involved_in ISO
IBA		 (PMID:17584859)
GO_REF:0000033		 RGD
GO_Central		 PMID:17584859 GO_REF:0000033 NCBI chr 8:117,229,575...117,234,311
Ensembl chr 8:108,350,935...108,355,671 		JBrowse link
G Gnat3 G protein subunit alpha transducin 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:18,054,551...18,104,332
Ensembl chr 4:17,162,490...17,212,283 		JBrowse link
G Pde6c phosphodiesterase 6C acts_upstream_of_or_within ISO MGI:2657247 (PMID:16723493) RGD PMID:16723493 NCBI chr 1:245,322,015...245,377,874
Ensembl chr 1:235,909,775...235,965,315 		JBrowse link
G Pnpla2 patatin-like phospholipase domain containing 2 acts_upstream_of
involved_in		 ISO
IEA		 MGI:2445721 (PMID:12484775)
GO_REF:0000107		 RGD
Ensembl		 PMID:12484775 GO_REF:0000107 NCBI chr 1:205,982,279...205,987,361
Ensembl chr 1:196,552,723...196,557,805 		JBrowse link
G Rbp4 retinol binding protein 4 acts_upstream_of ISO MGI:2445721 (PMID:12484775) RGD PMID:12484775 NCBI chr 1:245,306,349...245,313,551
Ensembl chr 1:235,893,917...235,901,399 		JBrowse link
G Ttr transthyretin acts_upstream_of
involved_in		 ISO
IEA		 MGI:2445721 (PMID:12484775)
GO_REF:0000107		 RGD
Ensembl		 PMID:12484775 GO_REF:0000107 NCBI chr18:12,216,684...12,225,972
Ensembl chr18:11,943,789...11,951,008 		JBrowse link
red, far-red light phototransduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rho rhodopsin IDA RGD PMID:2525480 RGD:6893558 NCBI chr 4:150,653,205...150,658,367
Ensembl chr 4:148,980,611...148,985,773 		JBrowse link
regulation of cellular response to X-ray term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 involved_in ISO (PMID:19735555) RGD PMID:19735555 NCBI chr17:73,544,234...73,575,670
Ensembl chr17:68,643,873...68,665,391 		JBrowse link
regulation of mRNA stability involved in cellular response to UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Npm1 nucleophosmin 1 involved_in ISO (PMID:12080348) RGD PMID:12080348 NCBI chr10:18,245,739...18,255,913
Ensembl chr10:17,739,941...17,751,645
Ensembl chr  X:17,739,941...17,751,645 		JBrowse link
regulation of opsin-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aipl1 aryl hydrocarbon receptor-interacting protein-like 1 acts_upstream_of_or_within ISO MGI:3054784|MGI:3054793 (PMID:15365173), (PMID:15365178) RGD PMID:15365173 PMID:15365178 NCBI chr10:57,154,226...57,163,455
Ensembl chr10:56,655,693...56,664,922 		JBrowse link
G Grk1 G protein-coupled receptor kinase 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:15946941)		 UniProt
Ensembl
RGD		 PMID:15946941 GO_REF:0000024 GO_REF:0000107 NCBI chr16:82,821,184...82,837,971
Ensembl chr16:76,123,842...76,135,792 		JBrowse link
regulation of translation involved in cellular response to UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rpl26 ribosomal protein L26 involved_in ISO
IEA		 (PMID:16213212)
GO_REF:0000107		 RGD
Ensembl		 PMID:16213212 GO_REF:0000107 NCBI chr10:54,109,692...54,112,822
Ensembl chr10:53,610,421...53,613,966 		JBrowse link
response to blue light term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cpt1b carnitine palmitoyltransferase 1B involved_in ISS
ISO		 GO_REF:0000024
(PMID:32040503)		 UniProt
RGD		 PMID:32040503 GO_REF:0000024 NCBI chr 7:122,370,974...122,380,473
Ensembl chr 7:120,491,354...120,500,404 		JBrowse link
G Dct dopachrome tautomerase involved_in ISO (PMID:28842328) RGD PMID:28842328 NCBI chr15:101,469,159...101,508,029
Ensembl chr15:95,062,003...95,100,836 		JBrowse link
G Kcnj10 potassium inwardly-rectifying channel, subfamily J, member 10 IEP RGD PMID:18450590 RGD:2326038 NCBI chr13:87,334,510...87,367,747
Ensembl chr13:84,802,009...84,835,461 		JBrowse link
G Lcn2 lipocalin 2 IEP RGD PMID:30574656 RGD:126781752 NCBI chr 3:36,078,432...36,081,851
Ensembl chr 3:15,680,687...15,684,095 		JBrowse link
G Opn3 opsin 3 involved_in ISO (PMID:28842328), (PMID:30168605)
(PMID:32040503)		 RGD PMID:28842328 PMID:30168605 PMID:32040503 NCBI chr13:90,121,560...90,152,076
Ensembl chr13:87,589,333...87,619,847 		JBrowse link
G Tyr tyrosinase involved_in ISO (PMID:28842328) RGD PMID:28842328 NCBI chr 1:150,527,687...150,622,857
Ensembl chr 1:141,115,036...141,210,207 		JBrowse link
response to gamma radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 acts_upstream_of_or_within ISO MGI:2157186 (PMID:15480992) RGD PMID:15480992 NCBI chr 4:157,472,879...157,500,496
Ensembl chr 4:155,800,887...155,827,390 		JBrowse link
G Bak1 BCL2-antagonist/killer 1 acts_upstream_of_or_within ISO MGI:2159364 (PMID:17068116) RGD PMID:17068116 NCBI chr20:5,102,334...5,111,615
Ensembl chr20:5,100,480...5,109,264 		JBrowse link
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO MGI:1857429 (PMID:17068116) RGD PMID:17068116 NCBI chr 1:105,076,472...105,081,906
Ensembl chr 1:95,938,808...95,945,368 		JBrowse link
G Bcl2 BCL2, apoptosis regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2156165 (PMID:10815637), (PMID:17068116), (PMID:8170972), (PMID:8372353)		 Ensembl
RGD		 PMID:8170972 PMID:8372353 PMID:10815637 PMID:17068116 GO_REF:0000107 NCBI chr13:23,204,464...23,366,900
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743 		JBrowse link
G Brca2 BRCA2, DNA repair associated involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2177233|MGI:2653913|MGI:2653914 (PMID:9126738), (PMID:9699678)		 Ensembl
RGD		 PMID:9126738 PMID:9699678 GO_REF:0000107 NCBI chr12:4,895,092...4,939,340
Ensembl chr12:59,819...100,567 		JBrowse link
G Casp6 caspase 6 IEP RGD PMID:10590178 RGD:2301333 NCBI chr 2:221,140,287...221,152,727
Ensembl chr 2:218,466,076...218,478,502 		JBrowse link
G Cav1 caveolin 1 IEP RGD PMID:17993744 RGD:2289115 NCBI chr 4:46,606,538...46,639,616
Ensembl chr 4:45,634,918...45,673,705 		JBrowse link
G Cbl Cbl proto-oncogene IEP RGD PMID:16301331 RGD:1579837 NCBI chr 8:53,384,656...53,468,067
Ensembl chr 8:44,489,410...44,571,176 		JBrowse link
G Ccl2 C-C motif chemokine ligand 2 IEP RGD PMID:19084914 RGD:2306303 NCBI chr10:67,503,077...67,504,875
Ensembl chr10:67,005,424...67,007,226 		JBrowse link
G Ccl7 C-C motif chemokine ligand 7 IEP RGD PMID:20185578 RGD:5134998 NCBI chr10:67,514,095...67,515,945
Ensembl chr10:67,016,446...67,018,303 		JBrowse link
G Ccn2 cellular communication network factor 2 IEP RGD PMID:34036875 RGD:597830143 NCBI chr 1:22,621,498...22,624,614
Ensembl chr 1:20,802,199...20,805,734 		JBrowse link
G Chek2 checkpoint kinase 2 acts_upstream_of_or_within ISO (PMID:14744935) RGD PMID:14744935 NCBI chr12:51,448,838...51,481,159
Ensembl chr12:45,788,827...45,821,286 		JBrowse link
G Cxcl1 C-X-C motif chemokine ligand 1 IEP RGD PMID:20185578 RGD:5134998 NCBI chr14:17,477,542...17,479,321
Ensembl chr14:17,193,365...17,195,215 		JBrowse link
G Cxcl10 C-X-C motif chemokine ligand 10 IEP RGD PMID:19084914 RGD:2306303 NCBI chr14:15,989,066...15,991,263
Ensembl chr14:15,704,758...15,706,975 		JBrowse link
G Cxcl2 C-X-C motif chemokine ligand 2 IEP RGD PMID:20185578 RGD:5134998 NCBI chr14:17,465,210...17,467,255
Ensembl chr14:17,181,062...17,183,075 		JBrowse link
G Cxcl6 C-X-C motif chemokine ligand 6 IEP RGD PMID:20185578 RGD:5134998 NCBI chr14:17,594,959...17,596,417
Ensembl chr14:17,310,426...17,313,093 		JBrowse link
G Cyp11a1 cytochrome P450, family 11, subfamily a, polypeptide 1 IEP 137 cesium RGD PMID:18046538 RGD:4831839 NCBI chr 8:67,318,665...67,330,196
Ensembl chr 8:58,404,669...58,434,338 		JBrowse link
G Dcun1d3 defective in cullin neddylation 1 domain containing 3 involved_in ISO
ISS		 (PMID:18823379)
GO_REF:0000024		 RGD
UniProt		 PMID:18823379 GO_REF:0000024 NCBI chr 1:183,674,364...183,717,002
Ensembl chr 1:66,494,848...66,496,343
Ensembl chr 1:66,494,848...66,496,343 		JBrowse link
G Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 IEP RGD PMID:19169047 RGD:9685443 NCBI chr 1:249,374,810...249,502,310
Ensembl chr 1:239,425,430...239,552,317 		JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor acts_upstream_of_or_within ISO MGI:1932102 (PMID:15340056) RGD PMID:15340056 NCBI chr16:7,771,311...7,841,895
Ensembl chr16:7,765,013...7,835,587 		JBrowse link
G Fancd2 FA complementation group D2 involved_in ISO
IEA		 (PMID:12874027)
GO_REF:0000107		 RGD
Ensembl		 PMID:12874027 GO_REF:0000107 NCBI chr 4:148,234,633...148,299,035
Ensembl chr 4:146,679,179...146,743,412 		JBrowse link
G Gata3 GATA binding protein 3 IEP RGD PMID:19084914 RGD:2306303 NCBI chr17:73,544,234...73,575,670
Ensembl chr17:68,643,873...68,665,391 		JBrowse link
G Gpx1 glutathione peroxidase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:104887|MGI:98352 (PMID:15182862)		 Ensembl
RGD		 PMID:15182862 GO_REF:0000107 NCBI chr 8:117,905,462...117,906,588
Ensembl chr 8:109,026,905...109,028,024 		JBrowse link
G Il1a interleukin 1 alpha IEP RGD PMID:16524844 RGD:2311096 NCBI chr 3:136,979,804...136,990,236
Ensembl chr 3:116,526,604...116,536,822 		JBrowse link
G Il1b interleukin 1 beta IEP RGD PMID:16524844 PMID:34036875 RGD:2311096, RGD:597830143 NCBI chr 3:137,030,200...137,036,581
Ensembl chr 3:116,577,010...116,583,415 		JBrowse link
G Il6 interleukin 6 IEP RGD PMID:34036875 RGD:597830143 NCBI chr 4:5,889,999...5,894,575
Ensembl chr 4:5,213,394...5,219,178 		JBrowse link
G Il6r interleukin 6 receptor IEP RGD PMID:14751512 RGD:1625440 NCBI chr 2:177,582,020...177,646,705
Ensembl chr 2:175,298,686...175,347,536 		JBrowse link
G Lig4 DNA ligase 4 acts_upstream_of_or_within ISO MGI:1857732 (PMID:10911993), (PMID:9823897) RGD PMID:9823897 PMID:10911993 NCBI chr16:86,220,345...86,228,930
Ensembl chr16:79,518,312...79,527,040 		JBrowse link
G Men1 menin 1 involved_in ISO
IEA		 (PMID:12874027)
GO_REF:0000107		 RGD
Ensembl		 PMID:12874027 GO_REF:0000107 NCBI chr 1:213,068,166...213,074,132
Ensembl chr 1:203,639,000...203,644,871 		JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 IEP RGD PMID:14994994 RGD:10414067 NCBI chr13:94,839,484...94,871,295
Ensembl chr13:92,307,586...92,339,404 		JBrowse link
G Pml PML nuclear body scaffold acts_upstream_of_or_within ISO MGI:104662|MGI:2429949 (PMID:11025664), (PMID:9806545) RGD PMID:9806545 PMID:11025664 NCBI chr 8:67,523,164...67,557,801
Ensembl chr 8:58,628,837...58,658,971 		JBrowse link
G Polb DNA polymerase beta IEP RGD PMID:12425958 RGD:8694104 NCBI chr16:76,081,903...76,105,174
Ensembl chr16:69,379,400...69,404,812 		JBrowse link
G Polg DNA polymerase gamma, catalytic subunit IEP RGD PMID:12425958 RGD:8694104 NCBI chr 1:142,792,119...142,808,933
Ensembl chr 1:133,382,766...133,398,567 		JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:20647423)		 UniProt
RGD		 PMID:20647423 GO_REF:0000024 NCBI chr 2:55,967,766...56,003,450
Ensembl chr 2:54,240,137...54,275,978 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO MGI:2383951 (PMID:9768755) RGD PMID:9768755 NCBI chr11:98,544,952...98,762,499
Ensembl chr11:85,040,792...85,257,952 		JBrowse link
G Ptprc protein tyrosine phosphatase, receptor type, C IDA RGD PMID:17290791 RGD:1599984 NCBI chr13:52,147,717...52,259,810
Ensembl chr13:49,596,193...49,708,692 		JBrowse link
G Smad3 SMAD family member 3 IEP RGD PMID:34036875 RGD:597830143 NCBI chr 8:73,022,204...73,132,324
Ensembl chr 8:64,110,039...64,236,960 		JBrowse link
G Socs3 suppressor of cytokine signaling 3 IEP RGD PMID:14751512 PMID:16937495 RGD:1625440, RGD:2298916 NCBI chr10:103,692,579...103,695,975
Ensembl chr10:103,193,537...103,197,787 		JBrowse link
G Sod2 superoxide dismutase 2 acts_upstream_of_or_within ISO MGI:104887|MGI:98352 (PMID:15182862) RGD PMID:15182862 NCBI chr 1:50,043,323...50,050,168
Ensembl chr 1:47,636,528...47,645,189 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 IEP RGD PMID:34036875 RGD:597830143 NCBI chr 1:90,324,312...90,340,627
Ensembl chr 1:81,196,532...81,212,847 		JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase acts_upstream_of_or_within ISO MGI:4391656 (PMID:23726973) RGD PMID:23726973 NCBI chr 4:161,613,306...161,632,248
Ensembl chr 4:159,927,139...159,946,029
Ensembl chr 6:159,927,139...159,946,029 		JBrowse link
G Top1 DNA topoisomerase I IEP RGD PMID:2853856 RGD:2317066 NCBI chr 3:169,713,195...169,796,330
Ensembl chr 3:149,293,403...149,376,623 		JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within		 ISO (PMID:7958916)
MGI:1857590 (PMID:14744935), (PMID:17068116)		 RGD PMID:7958916 PMID:14744935 PMID:17068116 NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
G Xrcc2 X-ray repair cross complementing 2 acts_upstream_of_or_within ISO MGI:3654106 (PMID:16777961) RGD PMID:16777961 NCBI chr 4:10,157,130...10,237,089
Ensembl chr 4:9,423,898...9,442,482 		JBrowse link
G Xrcc4 X-ray repair cross complementing 4 acts_upstream_of_or_within ISO MGI:1926771 (PMID:9875844) RGD PMID:9875844 NCBI chr 2:22,686,506...22,932,929
Ensembl chr 2:20,951,200...21,197,808 		JBrowse link
response to high light intensity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mmp9 matrix metallopeptidase 9 IEP RGD PMID:17854381 RGD:8547925 NCBI chr 3:174,103,474...174,111,434
Ensembl chr 3:153,683,858...153,692,120 		JBrowse link
G Rdh13 retinol dehydrogenase 13 acts_upstream_of_or_within ISO MGI:5467544 (PMID:22605914) RGD PMID:22605914 NCBI chr 1:78,415,765...78,444,116
Ensembl chr 1:69,373,113...69,400,908 		JBrowse link
G Scn11a sodium voltage-gated channel alpha subunit 11 involved_in IEA
ISO		 GO_REF:0000107
MGI:5608917 (PMID:31534133)		 Ensembl
RGD		 PMID:31534133 GO_REF:0000107 NCBI chr 8:128,374,441...128,444,718
Ensembl chr 8:119,496,769...119,567,044 		JBrowse link
response to ionizing radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1b ATP-binding cassette, sub-family B member 1B IEP RGD PMID:16494520 RGD:1598565 NCBI chr 4:26,197,706...26,280,156
Ensembl chr 4:25,242,798...25,325,199 		JBrowse link
G Abcg5 ATP binding cassette subfamily G member 5 IEP RGD PMID:17132608 RGD:1598660 NCBI chr 6:15,717,936...15,743,376
Ensembl chr 6:9,965,118...9,990,563 		JBrowse link
G Abraxas1 abraxas 1, BRCA1 A complex subunit involved_in IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(PMID:17525340), (PMID:17643121), (PMID:19261748)		 Ensembl
UniProt
RGD		 PMID:17525340 PMID:17643121 PMID:19261748 GO_REF:0000024 GO_REF:0000107 NCBI chr14:9,100,650...9,115,012
Ensembl chr14:8,796,266...8,810,622 		JBrowse link
G Aen apoptosis enhancing nuclease involved_in ISS
ISO		 GO_REF:0000024
(PMID:16171785)		 UniProt
RGD		 PMID:16171785 GO_REF:0000024 NCBI chr 1:142,224,499...142,233,902
Ensembl chr 1:132,815,142...132,824,523 		JBrowse link
G Alad aminolevulinate dehydratase IEP 131Iodine RGD PMID:17916974 RGD:4144160 NCBI chr 5:80,977,562...80,987,901
Ensembl chr 5:75,961,993...75,972,474 		JBrowse link
G Atm ATM serine/threonine kinase involved_in
acts_upstream_of_or_within		 ISO (PMID:11375976), (PMID:9733515)
MGI:3605986|MGI:894697|MGI:99702 (PMID:10639175), (PMID:19061978)		 RGD PMID:9733515 PMID:10639175 PMID:11375976 PMID:19061978 NCBI chr 8:62,724,939...62,829,040
Ensembl chr 8:53,831,093...53,932,437 		JBrowse link
G Babam1 BRISC and BRCA1 A complex member 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:19261748), (PMID:19261749)		 UniProt
RGD		 PMID:19261748 PMID:19261749 GO_REF:0000024 NCBI chr16:18,102,885...18,108,916
Ensembl chr16:18,068,884...18,074,923 		JBrowse link
G Babam2 BRISC and BRCA1 A complex member 2 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000104
(PMID:19261748), (PMID:19261749)		 UniProt
RGD		 PMID:19261748 PMID:19261749 GO_REF:0000024 GO_REF:0000104 NCBI chr 6:30,089,065...30,467,508
Ensembl chr 6:24,369,022...24,833,951 		JBrowse link
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO MGI:107202|MGI:1857429 (PMID:10639175), (PMID:15578100) RGD PMID:10639175 PMID:15578100 NCBI chr 1:105,076,472...105,081,906
Ensembl chr 1:95,938,808...95,945,368 		JBrowse link
G Brat1 BRCA1-associated ATM activator 1 involved_in ISO (PMID:16452482) RGD PMID:16452482 NCBI chr12:19,043,004...19,065,686
Ensembl chr12:13,928,898...13,941,248 		JBrowse link
G Brca1 BRCA1, DNA repair associated involved_in ISO (PMID:17525340), (PMID:17643121), (PMID:19261748) RGD PMID:17525340 PMID:17643121 PMID:19261748 NCBI chr10:86,917,693...86,978,012
Ensembl chr10:86,418,000...86,477,304 		JBrowse link
G Brcc3 BRCA1/BRCA2-containing complex subunit 3 involved_in ISO
ISS		 (PMID:17525341), (PMID:19261746), (PMID:19261748)
GO_REF:0000024		 RGD
UniProt		 PMID:17525341 PMID:19261746 PMID:19261748 GO_REF:0000024 NCBI chr 9:2,073,927...2,076,469
Ensembl chr 9:1,986,575...1,991,080 		JBrowse link
G Brcc3dc BRCA1/BRCA2-containing complex, subunit 3, domain containing involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 7:45,901,321...45,903,078
Ensembl chr 7:44,005,646...44,016,670 		JBrowse link
G Brsk1 BR serine/threonine kinase 1 NOT|involved_in ISO (PMID:15150265) RGD PMID:15150265 NCBI chr 1:78,162,944...78,193,598
Ensembl chr 1:69,134,565...69,160,365 		JBrowse link
G Brsk2 BR serine/threonine kinase 2 NOT|involved_in ISS PMID:15150265 UniProt PMID:15150265 RGD:8554801 NCBI chr 1:206,465,040...206,518,156
Ensembl chr 1:197,035,633...197,088,092 		JBrowse link
G C1h10orf90 similar to human chromosome 10 open reading frame 90 involved_in ISO (PMID:20154723) RGD PMID:20154723 NCBI chr 1:198,489,686...198,723,260
Ensembl chr 1:189,059,746...189,293,435 		JBrowse link
G Ccr5 C-C motif chemokine receptor 5 IEP RGD PMID:16937495 RGD:2298916 NCBI chr 8:132,629,097...132,660,980
Ensembl chr 8:123,752,325...123,759,260 		JBrowse link
G Clk2 CDC-like kinase 2 involved_in ISO (PMID:20682768) RGD PMID:20682768 NCBI chr 2:176,868,423...176,880,412
Ensembl chr 2:174,570,653...174,588,985 		JBrowse link
G Cop1 COP1, E3 ubiquitin ligase involved_in ISO (PMID:19805145) RGD PMID:19805145 NCBI chr13:73,954,058...74,095,283
Ensembl chr13:71,429,961...71,538,890 		JBrowse link
G Cyp11a1 cytochrome P450, family 11, subfamily a, polypeptide 1 IEP enriched uranium RGD PMID:18821396 RGD:4770368 NCBI chr 8:67,318,665...67,330,196
Ensembl chr 8:58,404,669...58,434,338 		JBrowse link
G Cyp17a1 cytochrome P450, family 17, subfamily a, polypeptide 1 IEP enriched uranium RGD PMID:18821396 RGD:4770368 NCBI chr 1:255,476,861...255,484,547
Ensembl chr 1:245,535,462...245,541,573 		JBrowse link
G Cyp19a1 cytochrome P450, family 19, subfamily a, polypeptide 1 IEP enriched uranium RGD PMID:18821396 RGD:4770368 NCBI chr 8:63,449,148...63,476,534
Ensembl chr 8:54,553,165...54,580,758 		JBrowse link
G Cyp2r1 cytochrome P450, family 2, subfamily r, polypeptide 1 IEP RGD PMID:16806633 RGD:1601035 NCBI chr 1:178,166,984...178,232,191
Ensembl chr 1:168,751,038...168,797,759 		JBrowse link
G Dclre1c DNA cross-link repair 1C involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2667614 (PMID:12504013), (PMID:12615897)		 Ensembl
RGD		 PMID:12504013 PMID:12615897 GO_REF:0000107 NCBI chr17:79,684,988...79,718,399
Ensembl chr17:74,776,935...74,809,186 		JBrowse link
G Dnmt1 DNA methyltransferase 1 IEP RGD PMID:17148264 RGD:1601086 NCBI chr 8:27,716,797...27,763,405
Ensembl chr 8:19,440,611...19,486,659 		JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha IEP RGD PMID:17148264 RGD:1601086 NCBI chr 6:32,507,316...32,621,678
Ensembl chr 6:26,822,609...26,896,687 		JBrowse link
G Dnmt3b DNA methyltransferase 3 beta IEP RGD PMID:17148264 RGD:1601086 NCBI chr 3:162,590,777...162,629,313
Ensembl chr 3:142,130,592...142,169,124 		JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 involved_in ISO (PMID:19234442) RGD PMID:19234442 NCBI chr 5:9,646,599...9,884,609
Ensembl chr 5:4,955,543...5,101,483 		JBrowse link
G Eya3 EYA transcriptional coactivator and phosphatase 3 involved_in ISO (PMID:19234442) RGD PMID:19234442 NCBI chr 5:150,090,535...150,218,855
Ensembl chr 5:144,806,577...144,934,518 		JBrowse link
G Icam1 intercellular adhesion molecule 1 IEP gamma irradiation RGD PMID:20385203 RGD:4145425 NCBI chr 8:27,829,688...27,841,618
Ensembl chr 8:19,553,645...19,565,438 		JBrowse link
G Inip INTS3 and NABP interacting protein involved_in ISO (PMID:19605351), (PMID:19683501) RGD PMID:19605351 PMID:19683501 NCBI chr 5:79,443,317...79,457,552
Ensembl chr 5:74,648,392...74,662,628 		JBrowse link
G Ints3 integrator complex subunit 3 involved_in ISO (PMID:19605351), (PMID:19683501) RGD PMID:19605351 PMID:19683501 NCBI chr 2:178,157,015...178,209,263
Ensembl chr 2:175,859,440...175,911,709 		JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISO
IEA		 (PMID:18397884)
GO_REF:0000107		 RGD
Ensembl		 PMID:18397884 GO_REF:0000107 NCBI chr 1:212,325,089...212,332,640
Ensembl chr 1:202,895,751...202,903,458 		JBrowse link
G Krt14 keratin 14 IEP RGD PMID:12793764 RGD:1600177 NCBI chr10:85,638,182...85,642,450
Ensembl chr10:85,066,802...85,171,799 		JBrowse link
G Lig4 DNA ligase 4 acts_upstream_of_or_within ISO MGI:1857732 (PMID:10823907), (PMID:21390131) RGD PMID:10823907 PMID:21390131 NCBI chr16:86,220,345...86,228,930
Ensembl chr16:79,518,312...79,527,040 		JBrowse link
G Lzic leucine zipper and CTNNBIP1 domain containing IEP RGD PMID:19444910 RGD:2314410 NCBI chr 5:165,211,359...165,224,569
Ensembl chr 5:159,920,439...159,939,685 		JBrowse link
G Mecp2 methyl CpG binding protein 2 IEP RGD PMID:17148264 RGD:1601086 NCBI chr  X:156,932,481...156,995,981
Ensembl chr  X:151,789,930...151,844,689 		JBrowse link
G Mrnip MRN complex interacting protein involved_in ISO (PMID:27568553) RGD PMID:27568553 NCBI chr10:35,002,440...35,026,555
Ensembl chr10:34,501,384...34,525,469 		JBrowse link
G Mta1 metastasis associated 1 involved_in ISO
IBA
IEA
ISS		 (PMID:19805145)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024		 RGD
GO_Central
Ensembl
UniProt		 PMID:19805145 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:137,999,845...138,038,696
Ensembl chr 6:132,178,853...132,217,641 		JBrowse link
G Nabp1 nucleic acid binding protein 1 involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:19605351), (PMID:19683501)		 UniProt
GO_Central
RGD		 PMID:19605351 PMID:19683501 GO_REF:0000024 GO_REF:0000033 NCBI chr 9:57,570,326...57,625,926
Ensembl chr 9:50,126,726...50,134,107 		JBrowse link
G Nabp2 nucleic acid binding protein 2 involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000107
(PMID:19605351), (PMID:19683501)		 UniProt
GO_Central
Ensembl
RGD		 PMID:19605351 PMID:19683501 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:1,415,491...1,421,113
Ensembl chr 7:830,949...838,027 		JBrowse link
G Nek1 NIMA-related kinase 1 acts_upstream_of_or_within ISO MGI:1858122 (PMID:15604234) RGD PMID:15604234 NCBI chr16:34,009,092...34,137,418
Ensembl chr16:28,998,231...29,117,723 		JBrowse link
G Nes nestin IEP RGD PMID:12445635 RGD:1642076 NCBI chr 2:175,735,715...175,745,631
Ensembl chr 2:173,438,734...173,447,777 		JBrowse link
G Nhej1 nonhomologous end-joining factor 1 involved_in ISO
IEA
ISS		 (PMID:16439205)
GO_REF:0000107		 RGD
Ensembl		 PMID:16439205 PMID:16439205 GO_REF:0000107, RGD:8553261 NCBI chr 9:83,974,995...84,071,161
Ensembl chr 9:76,526,324...76,622,444 		JBrowse link
G Paxip1 PAX interacting protein 1 involved_in ISO (PMID:15456759) RGD PMID:15456759 NCBI chr 4:8,258,930...8,310,490
Ensembl chr 4:7,525,004...7,576,548 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO MGI:1857934 (PMID:20150414) RGD PMID:20150414 NCBI chr11:98,544,952...98,762,499
Ensembl chr11:85,040,792...85,257,952 		JBrowse link
G Rad54b RAD54 homolog B acts_upstream_of_or_within ISO MGI:107202|MGI:3617695|MGI:894697 (PMID:16428451), (PMID:19061978) RGD PMID:16428451 PMID:19061978 NCBI chr 5:29,829,465...29,901,967
Ensembl chr 5:25,032,066...25,104,616 		JBrowse link
G Rad54l RAD54 like acts_upstream_of_or_within ISO MGI:107202|MGI:2183934|MGI:3605986 (PMID:16428451), (PMID:19061978), (PMID:20150414) RGD PMID:16428451 PMID:19061978 PMID:20150414 NCBI chr 5:134,812,158...134,841,821
Ensembl chr 5:129,575,378...129,605,070 		JBrowse link
G Rfwd3 ring finger and WD repeat domain 3 involved_in ISO (PMID:20173098) RGD PMID:20173098 NCBI chr19:56,145,221...56,177,871
Ensembl chr19:39,236,787...39,268,479 		JBrowse link
G Rnf168 ring finger protein 168 involved_in ISO
IEA
ISS		 (PMID:19203578), (PMID:19203579)
GO_REF:0000104
GO_REF:0000024		 RGD
UniProt		 PMID:19203578 PMID:19203579 GO_REF:0000024 GO_REF:0000104 NCBI chr11:81,991,352...82,013,306
Ensembl chr11:68,486,321...68,508,277 		JBrowse link
G Rnf8 ring finger protein 8 involved_in ISO
ISS		 (PMID:18001824), (PMID:18001825)
GO_REF:0000024		 RGD
UniProt		 PMID:18001824 PMID:18001825 GO_REF:0000024 NCBI chr20:7,683,890...7,708,437
Ensembl chr20:7,682,322...7,708,491 		JBrowse link
G Rrm1 ribonucleotide reductase catalytic subunit M1 IEP RGD PMID:19444910 RGD:2314410 NCBI chr 1:166,235,904...166,260,206
Ensembl chr 1:156,823,960...156,848,261 		JBrowse link
G Smpd1 sphingomyelin phosphodiesterase 1 involved_in ISO (PMID:8706124) RGD PMID:8706124 NCBI chr 1:169,304,772...169,308,615
Ensembl chr 1:159,892,859...159,896,794 		JBrowse link
G Star steroidogenic acute regulatory protein IEP enriched uranium RGD PMID:18821396 RGD:4770368 NCBI chr16:72,969,824...72,974,447
Ensembl chr16:66,264,807...66,271,672 		JBrowse link
G Stk11 serine/threonine kinase 11 involved_in ISS
ISO		 GO_REF:0000024
(PMID:12234250)		 UniProt
RGD		 PMID:12234250 GO_REF:0000024 NCBI chr 7:10,225,204...10,241,965
Ensembl chr 7:9,575,269...9,591,315 		JBrowse link
G Ticrr TOPBP1-interacting checkpoint and replication regulator involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:143,006,989...143,048,836
Ensembl chr 1:133,597,716...133,639,523 		JBrowse link
G Top2a DNA topoisomerase II alpha IEP RGD PMID:22965249 RGD:13432139 NCBI chr10:84,441,954...84,473,093
Ensembl chr10:83,945,735...83,976,874 		JBrowse link
G Topbp1 DNA topoisomerase II binding protein 1 involved_in ISO (PMID:12773567) RGD PMID:12773567 NCBI chr 8:112,766,791...112,815,203
Ensembl chr 8:103,887,865...103,931,674 		JBrowse link
G Tp53bp2 tumor protein p53 binding protein, 2 acts_upstream_of_or_within ISO MGI:3625686 (PMID:16702401) RGD PMID:16702401 NCBI chr13:96,620,429...96,677,090
Ensembl chr13:94,088,709...94,145,432 		JBrowse link
G Uimc1 ubiquitin interaction motif containing 1 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:17525340), (PMID:17525341), (PMID:17525342), (PMID:17643121), (PMID:19261748)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:17525340 PMID:17525341 PMID:17525342 PMID:17643121 PMID:19261748 GO_REF:0000024 GO_REF:0000107 NCBI chr17:9,528,923...9,597,967
Ensembl chr17:9,527,794...9,592,799 		JBrowse link
G Usp28 ubiquitin specific peptidase 28 involved_in ISO
ISS		 (PMID:16901786)
GO_REF:0000024		 RGD
UniProt		 PMID:16901786 GO_REF:0000024 NCBI chr 8:58,222,258...58,282,711
Ensembl chr 8:49,325,867...49,386,229 		JBrowse link
G Vcam1 vascular cell adhesion molecule 1 IEP RGD PMID:19714308 RGD:2312872 NCBI chr 2:206,723,050...206,742,783
Ensembl chr 2:204,038,114...204,057,958 		JBrowse link
G Xrcc4 X-ray repair cross complementing 4 acts_upstream_of_or_within ISO MGI:1926771|MGI:3047571|MGI:3641440 (PMID:17713479) RGD PMID:17713479 NCBI chr 2:22,686,506...22,932,929
Ensembl chr 2:20,951,200...21,197,808 		JBrowse link
G Xrcc6 X-ray repair cross complementing 6 acts_upstream_of_or_within ISO MGI:2179954|MGI:3625858 (PMID:15979950), (PMID:21568942) RGD PMID:15979950 PMID:21568942 NCBI chr 7:115,423,026...115,443,884
Ensembl chr 7:113,543,057...113,563,762 		JBrowse link
response to light intensity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdnf brain-derived neurotrophic factor IEP RGD PMID:21076359 RGD:8655612 NCBI chr 3:116,619,633...116,670,212
Ensembl chr 3:96,165,042...96,215,615 		JBrowse link
G Cat catalase IEP RGD PMID:17514533 RGD:9107626 NCBI chr 3:110,297,340...110,329,526
Ensembl chr 3:89,842,399...89,874,478 		JBrowse link
G Cntf ciliary neurotrophic factor IEP RGD PMID:21076359 RGD:8655612 NCBI chr 1:219,312,512...219,314,535
Ensembl chr 1:209,887,854...209,889,877 		JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO MGI:5750095 (PMID:32889171) RGD PMID:32889171 NCBI chr 4:75,109,358...77,366,258
Ensembl chr 4:74,109,472...76,362,027 		JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO (PMID:22411800) RGD PMID:22411800 NCBI chr 7:86,265,651...86,544,488
Ensembl chr 7:84,375,784...84,655,357 		JBrowse link
G Frmpd1 FERM and PDZ domain containing 1 acts_upstream_of_or_within ISO (PMID:36787362) RGD PMID:36787362 NCBI chr 5:64,238,730...64,340,778
Ensembl chr 5:59,443,076...59,545,080 		JBrowse link
G Gnat1 G protein subunit alpha transducin 1 acts_upstream_of_or_within IDA
ISO		 MGI:2152779 (PMID:20844144), (PMID:24373883), (PMID:24396062), (PMID:30799247), (PMID:33593858) RGD PMID:20844144 PMID:24373883 PMID:24396062 PMID:30799247 PMID:33593858 More... RGD:1599009 NCBI chr 8:117,229,575...117,234,311
Ensembl chr 8:108,350,935...108,355,671 		JBrowse link
G Gnat2 G protein subunit alpha transducin 2 acts_upstream_of_or_within IDA
ISO		 MGI:3588845|MGI:5051274 (PMID:20844144), (PMID:24373883), (PMID:24396062), (PMID:24403163), (PMID:29518352), (PMID:30225342), (PMID:33593858) RGD PMID:20844144 PMID:24373883 PMID:24396062 PMID:24403163 PMID:29518352 More... RGD:2302146 NCBI chr 2:198,414,568...198,431,532
Ensembl chr 2:195,726,762...195,735,866 		JBrowse link
G Gpsm2 G-protein signaling modulator 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:36787362)
GO_REF:0000107		 RGD
Ensembl		 PMID:36787362 GO_REF:0000107 NCBI chr 2:199,015,250...199,063,788
Ensembl chr 2:196,327,149...196,375,154 		JBrowse link
G Kcnc1 potassium voltage-gated channel subfamily C member 1 IEP RGD PMID:18708127 RGD:9685740 NCBI chr 1:106,039,247...106,081,034
Ensembl chr 1:96,902,953...96,944,744 		JBrowse link
G Kcnc2 potassium voltage-gated channel subfamily C member 2 IEP RGD PMID:18708127 RGD:9685740 NCBI chr 7:49,586,274...49,770,212
Ensembl chr 7:47,700,288...47,883,968 		JBrowse link
G Mt-nd3 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 3 IEP RGD PMID:15277468 RGD:2302310 NCBI chr MT:9,451...9,798
Ensembl chr MT:9,451...9,798 		JBrowse link
G Rho rhodopsin acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:4947230 (PMID:32960171)
GO_REF:0000107		 RGD
Ensembl		 PMID:32960171 GO_REF:0000107 NCBI chr 4:150,653,205...150,658,367
Ensembl chr 4:148,980,611...148,985,773 		JBrowse link
response to light stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aanat aralkylamine N-acetyltransferase involved_in IEP
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:18001324 GO_REF:0000033, RGD:2301033 NCBI chr10:102,323,647...102,330,639
Ensembl chr10:101,827,301...101,831,801 		JBrowse link
G Asns asparagine synthetase (glutamine-hydrolyzing) IEP transpupillary thermotherapy laser RGD PMID:16885923 RGD:2302304 NCBI chr 4:36,752,061...36,769,970
Ensembl chr 4:35,785,237...35,803,423 		JBrowse link
G Bbs10 Bardet-Biedl syndrome 10 acts_upstream_of_or_within ISO (PMID:36700052) RGD PMID:36700052 NCBI chr 7:48,637,324...48,640,395
Ensembl chr 7:46,750,993...46,754,141 		JBrowse link
G Bdnf brain-derived neurotrophic factor IEP RGD PMID:17640634 RGD:8655603 NCBI chr 3:116,619,633...116,670,212
Ensembl chr 3:96,165,042...96,215,615 		JBrowse link
G Bhlhe40 basic helix-loop-helix family, member e40 involved_in IEP
IDA		 PMID:12397359 RGD
UniProt		 PMID:12397359 PMID:12397359 RGD:625726, RGD:625726 NCBI chr 4:143,174,450...143,180,150
Ensembl chr 4:141,618,476...141,624,774 		JBrowse link
G Clock clock circadian regulator IEP RGD PMID:10471199 RGD:10401879 NCBI chr14:32,262,747...32,346,872
Ensembl chr14:31,908,566...31,990,400 		JBrowse link
G Clu clusterin IEP RGD PMID:11803476 RGD:9062370 NCBI chr15:44,336,619...44,375,861
Ensembl chr15:40,174,617...40,200,315 		JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:29561690)		 UniProt
RGD		 PMID:29561690 GO_REF:0000024 NCBI chr 7:20,417,526...20,481,791
Ensembl chr 7:18,529,823...18,594,091 		JBrowse link
G Cry2 cryptochrome circadian regulator 2 involved_in ISO
ISS		 (PMID:15751956)
(PMID:29561690)
GO_REF:0000024		 RGD
UniProt		 PMID:15751956 PMID:29561690 GO_REF:0000024 NCBI chr 3:98,830,479...98,860,437
Ensembl chr 3:78,374,995...78,404,965 		JBrowse link
G Dnm2 dynamin 2 IEP RGD PMID:22666495 RGD:9685159 NCBI chr 8:28,254,344...28,336,297
Ensembl chr 8:19,978,400...20,060,157 		JBrowse link
G Drd2 dopamine receptor D2 acts_upstream_of_or_within ISO MGI:2387895 (PMID:16715079) RGD PMID:16715079 NCBI chr 8:58,605,403...58,669,339
Ensembl chr 8:49,708,927...49,772,875 		JBrowse link
G Drd4 dopamine receptor D4 IEP RGD PMID:19482058 RGD:401960072 NCBI chr 1:205,825,937...205,829,124
Ensembl chr 1:196,396,366...196,399,553 		JBrowse link
G Dusp1 dual specificity phosphatase 1 IEP RGD PMID:15527789 RGD:2298681 NCBI chr10:17,184,853...17,187,646 JBrowse link
G Dynlrb1 dynein light chain roadblock-type 1 IEP RGD PMID:10816553 RGD:633064 NCBI chr 3:164,197,892...164,224,409
Ensembl chr 3:143,742,586...143,764,227 		JBrowse link
G Elk1 ETS transcription factor ELK1 IDA RGD PMID:10383826 RGD:7488912 NCBI chr  X:3,692,367...3,709,252
Ensembl chr  X:1,139,756...1,155,713 		JBrowse link
G Fech ferrochelatase acts_upstream_of_or_within ISO MGI:1858114 (PMID:1939658) RGD PMID:1939658 NCBI chr18:60,215,325...60,248,525
Ensembl chr18:57,945,122...57,979,348 		JBrowse link
G Fmr1 fragile X messenger ribonucleoprotein 1 IEP RGD PMID:15564573 RGD:1601175 NCBI chr  X:152,284,857...152,322,686
Ensembl chr  X:147,240,301...147,278,050 		JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit IEP RGD PMID:11146118 RGD:2293791 NCBI chr 6:110,852,188...110,855,054
Ensembl chr 6:105,121,170...105,124,036 		JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit IEP RGD PMID:11146118 RGD:2293791 NCBI chr 6:30,017,952...30,039,269
Ensembl chr 6:24,300,956...24,320,034 		JBrowse link
G Gh1 growth hormone 1 IDA RGD PMID:19091612 RGD:2315626 NCBI chr10:91,727,883...91,729,860
Ensembl chr10:91,228,103...91,230,078 		JBrowse link
G Gja10 gap junction protein, alpha 10 acts_upstream_of_or_within ISO MGI:3043946 (PMID:16820008) RGD PMID:16820008 NCBI chr 5:51,787,407...51,799,827
Ensembl chr 5:46,992,946...46,996,570 		JBrowse link
G Gnat1 G protein subunit alpha transducin 1 acts_upstream_of_or_within ISO MGI:2152779|MGI:95779 (PMID:19815523), (PMID:21124780) RGD PMID:19815523 PMID:21124780 NCBI chr 8:117,229,575...117,234,311
Ensembl chr 8:108,350,935...108,355,671 		JBrowse link
G Gnat2 G protein subunit alpha transducin 2 acts_upstream_of_or_within ISO MGI:3588845|MGI:95778 (PMID:19815523), (PMID:21124780), (PMID:29456141) RGD PMID:19815523 PMID:21124780 PMID:29456141 NCBI chr 2:198,414,568...198,431,532
Ensembl chr 2:195,726,762...195,735,866 		JBrowse link
G Gpr179 G protein-coupled receptor 179 acts_upstream_of_or_within ISO MGI:5431477 (PMID:22865473) RGD PMID:22865473 NCBI chr10:82,820,954...82,836,833
Ensembl chr10:82,337,771...82,340,448 		JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A IEP RGD PMID:19850826 RGD:2325946 NCBI chr10:6,136,458...6,560,003
Ensembl chr10:5,631,369...6,044,637 		JBrowse link
G Grk1 G protein-coupled receptor kinase 1 acts_upstream_of_or_within IEP
ISO		 MGI:2668595 (PMID:10097103) RGD PMID:10097103 PMID:3950623 RGD:1600007 NCBI chr16:82,821,184...82,837,971
Ensembl chr16:76,123,842...76,135,792 		JBrowse link
G Junb JunB proto-oncogene, AP-1 transcription factor subunit IEP RGD PMID:11146118 RGD:2293791 NCBI chr19:40,081,126...40,082,910
Ensembl chr19:23,176,294...23,178,035 		JBrowse link
G Jund JunD proto-oncogene, AP-1 transcription factor subunit IEP RGD PMID:11146118 RGD:2293791 NCBI chr16:18,768,093...18,769,771
Ensembl chr16:18,734,122...18,735,799 		JBrowse link
G Kmt2a lysine methyltransferase 2A acts_upstream_of_or_within ISO MGI:3839794 (PMID:25834037) RGD PMID:25834037 NCBI chr 8:54,013,547...54,089,219
Ensembl chr 8:45,118,814...45,193,181 		JBrowse link
G Large1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO MGI:3510641 (PMID:22865473) RGD PMID:22865473 NCBI chr19:11,609,004...12,057,174
Ensembl chr19:11,603,129...12,048,930 		JBrowse link
G Lrit1 leucine-rich repeat, Ig-like and transmembrane domains 1 acts_upstream_of_or_within ISO (PMID:29590623) RGD PMID:29590623 NCBI chr16:12,842,339...12,850,266
Ensembl chr16:12,822,076...12,831,772 		JBrowse link
G Lrit3 leucine-rich repeat, Ig-like and transmembrane domains 3 acts_upstream_of_or_within ISO (PMID:31959619) RGD PMID:31959619 NCBI chr 2:221,011,458...221,034,568
Ensembl chr 2:218,337,819...218,357,307 		JBrowse link
G Mapk10 mitogen activated protein kinase 10 involved_in ISS
ISO		 GO_REF:0000024
(PMID:22441692)		 UniProt
RGD		 PMID:22441692 GO_REF:0000024 NCBI chr14:6,802,247...7,094,103
Ensembl chr14:6,497,707...6,786,201 		JBrowse link
G Mat2a methionine adenosyltransferase 2A IEP RGD PMID:15504733 RGD:1598692 NCBI chr 4:106,048,043...106,053,612
Ensembl chr 4:104,488,466...104,495,493 		JBrowse link
G Myo15a myosin XVA IDA RGD PMID:21479269 RGD:150429616 NCBI chr10:45,776,907...45,835,473
Ensembl chr10:45,278,737...45,335,340 		JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 IEP RGD PMID:17640634 RGD:8655603 NCBI chr17:5,560,558...5,875,899
Ensembl chr17:5,559,043...5,869,136 		JBrowse link
G Ogg1 8-oxoguanine DNA glycosylase IEP RGD PMID:15979612 RGD:8694099 NCBI chr 4:148,030,237...148,037,599
Ensembl chr 4:146,474,750...146,484,766 		JBrowse link
G Polg DNA polymerase gamma, catalytic subunit IEP RGD PMID:15979612 RGD:8694099 NCBI chr 1:142,792,119...142,808,933
Ensembl chr 1:133,382,766...133,398,567 		JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma involved_in ISO (PMID:19041764) RGD PMID:19041764 NCBI chr 4:150,095,743...150,221,104
Ensembl chr 4:148,423,194...148,548,468 		JBrowse link
G Rho rhodopsin acts_upstream_of_or_within ISO MGI:2181812 (PMID:16723493) RGD PMID:16723493 NCBI chr 4:150,653,205...150,658,367
Ensembl chr 4:148,980,611...148,985,773 		JBrowse link
G Ric8a RIC8 guanine nucleotide exchange factor A acts_upstream_of_or_within ISO MGI:3608888 (PMID:16221497) RGD PMID:16221497 NCBI chr 1:205,364,796...205,371,102
Ensembl chr 1:195,935,349...195,941,467 		JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 IEP RGD PMID:17389522 RGD:9585654 NCBI chr 2:251,425,228...251,457,209
Ensembl chr 2:248,766,612...248,798,403 		JBrowse link
G Slc1a2 solute carrier family 1 member 2 acts_upstream_of_or_within ISO MGI:2449707 (PMID:9539795) RGD PMID:9539795 NCBI chr 3:109,460,109...109,590,445
Ensembl chr 3:89,005,129...89,126,498 		JBrowse link
G Slc1a3 solute carrier family 1 member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1931872 (PMID:9539795)		 Ensembl
RGD		 PMID:9539795 GO_REF:0000107 NCBI chr 2:59,482,707...59,557,808
Ensembl chr 2:57,755,497...57,830,605 		JBrowse link
G Slc4a10 solute carrier family 4 member 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3774019 (PMID:18165320)		 Ensembl
RGD		 PMID:18165320 GO_REF:0000107 NCBI chr 3:67,050,925...67,367,637
Ensembl chr 3:46,665,265...46,957,268 		JBrowse link
G Syne1 spectrin repeat containing nuclear envelope protein 1 IEP RGD PMID:8700883 RGD:632616 NCBI chr 1:43,917,640...44,388,802
Ensembl chr 1:41,512,030...41,983,322 		JBrowse link
G Th tyrosine hydroxylase IEP RGD PMID:21185915 RGD:5128767 NCBI chr 1:207,500,959...207,508,276
Ensembl chr 1:198,071,503...198,109,767 		JBrowse link
response to low light intensity stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmgcs1 3-hydroxy-3-methylglutaryl-CoA synthase 1 IEP RGD PMID:1683769 RGD:2326143 NCBI chr 2:53,379,457...53,399,807
Ensembl chr 2:51,649,497...51,667,100 		JBrowse link
G Prph2 peripherin 2 IEP RGD PMID:8320859 RGD:8553226 NCBI chr 9:21,563,770...21,579,074
Ensembl chr 9:14,066,156...14,081,454 		JBrowse link
response to UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brsk1 BR serine/threonine kinase 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:15150265) RGD PMID:15150265 NCBI chr 1:78,162,944...78,193,598
Ensembl chr 1:69,134,565...69,160,365 		JBrowse link
G Brsk2 BR serine/threonine kinase 2 involved_in ISS PMID:15150265 UniProt PMID:15150265 RGD:8554801 NCBI chr 1:206,465,040...206,518,156
Ensembl chr 1:197,035,633...197,088,092 		JBrowse link
G C1h10orf90 similar to human chromosome 10 open reading frame 90 involved_in ISO (PMID:20843368) RGD PMID:20843368 NCBI chr 1:198,489,686...198,723,260
Ensembl chr 1:189,059,746...189,293,435 		JBrowse link
G Casp3 caspase 3 acts_upstream_of_or_within ISO MGI:109383 (PMID:11092819), (PMID:16469926) RGD PMID:11092819 PMID:16469926 NCBI chr16:52,395,539...52,413,794
Ensembl chr16:45,662,910...45,684,648 		JBrowse link
G Casp7 caspase 7 acts_upstream_of_or_within ISO MGI:107739 (PMID:16469926) RGD PMID:16469926 NCBI chr 1:265,442,647...265,481,938
Ensembl chr 1:255,437,172...255,476,729 		JBrowse link
G Casp9 caspase 9 acts_upstream_of_or_within ISO MGI:2158755 (PMID:11092819) RGD PMID:11092819 Ensembl chr 5:154,109,046...154,126,626 JBrowse link
G Cat catalase IEP RGD PMID:12592055 RGD:9179775 NCBI chr 3:110,297,340...110,329,526
Ensembl chr 3:89,842,399...89,874,478 		JBrowse link
G Ccar2 cell cycle and apoptosis regulator 2 involved_in ISO (PMID:23352644) RGD PMID:23352644 NCBI chr15:51,622,519...51,637,911
Ensembl chr15:45,212,803...45,227,636 		JBrowse link
G Cdkn1a cyclin-dependent kinase inhibitor 1A acts_upstream_of_or_within ISO MGI:1933751 (PMID:12952892) RGD PMID:12952892 NCBI chr20:7,150,820...7,161,373
Ensembl chr20:7,149,217...7,159,585 		JBrowse link
G Cdkn2d cyclin dependent kinase inhibitor 2D involved_in ISO (PMID:15750620) RGD PMID:15750620 NCBI chr 8:28,108,036...28,110,809
Ensembl chr 8:19,831,866...19,834,674 		JBrowse link
G Cirbp cold inducible RNA binding protein involved_in ISS
ISO		 GO_REF:0000024
(PMID:11574538)		 UniProt
RGD		 PMID:11574538 GO_REF:0000024 NCBI chr 7:10,184,515...10,189,623
Ensembl chr 7:9,424,178...9,538,818 		JBrowse link
G Col6a1 collagen type VI alpha 1 chain acts_upstream_of_or_within ISO (PMID:21459131) RGD PMID:21459131 NCBI chr20:11,905,690...11,924,111
Ensembl chr20:11,905,957...11,924,597 		JBrowse link
G Col6a2 collagen type VI alpha 2 chain acts_upstream_of_or_within ISO (PMID:21459131) RGD PMID:21459131 NCBI chr20:12,021,182...12,048,932
Ensembl chr20:12,021,767...12,057,564 		JBrowse link
G Col6a3 collagen type VI alpha 3 chain acts_upstream_of_or_within ISO (PMID:21459131) RGD PMID:21459131 NCBI chr 9:98,809,171...98,887,060
Ensembl chr 9:91,361,583...91,439,471 		JBrowse link
G Ddb2 damage specific DNA binding protein 2 involved_in ISO
IBA		 (PMID:12732143)
GO_REF:0000033		 RGD
GO_Central		 PMID:12732143 GO_REF:0000033 NCBI chr 3:97,640,923...97,667,617
Ensembl chr 3:77,185,109...77,207,631 		JBrowse link
G Dtl denticleless E3 ubiquitin protein ligase homolog involved_in ISO (PMID:18794347) RGD PMID:18794347 NCBI chr13:105,646,908...105,685,921
Ensembl chr13:103,117,186...103,154,890 		JBrowse link
G Elane elastase, neutrophil expressed involved_in ISO (PMID:11928814) RGD PMID:11928814 NCBI chr 7:10,467,877...10,469,725
Ensembl chr 7:9,817,252...9,819,100 		JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit acts_upstream_of_or_within ISO MGI:2183949 (PMID:17020410) RGD PMID:17020410 NCBI chr 1:88,161,342...88,175,102
Ensembl chr 1:79,033,326...79,047,102 		JBrowse link
G Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit involved_in ISO (PMID:17509950) RGD PMID:17509950 NCBI chr18:24,157,831...24,188,543
Ensembl chr18:23,883,580...23,914,329 		JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit involved_in ISO (PMID:16678501) RGD PMID:16678501 NCBI chr10:2,926,085...2,958,176
Ensembl chr10:2,419,038...2,448,369
Ensembl chr10:2,419,038...2,448,369 		JBrowse link
G Ercc5 ERCC excision repair 5, endonuclease involved_in
acts_upstream_of_or_within		 ISO (PMID:16167068), (PMID:8710877)
MGI:3043589 (PMID:15082767)		 RGD PMID:8710877 PMID:15082767 PMID:16167068 NCBI chr 9:53,801,471...53,846,611
Ensembl chr 9:46,309,389...46,354,472 		JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor acts_upstream_of_or_within ISO MGI:1932102 (PMID:10843671), (PMID:15340056) RGD PMID:10843671 PMID:15340056 NCBI chr16:7,771,311...7,841,895
Ensembl chr16:7,765,013...7,835,587 		JBrowse link
G Ercc8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit involved_in
acts_upstream_of_or_within		 ISO (PMID:7664335)
MGI:2449180 (PMID:15340056)
(PMID:12732143)		 RGD PMID:7664335 PMID:12732143 PMID:15340056 NCBI chr 2:41,380,901...41,418,294
Ensembl chr 2:39,647,452...39,684,859 		JBrowse link
G Gnat2 G protein subunit alpha transducin 2 acts_upstream_of_or_within ISO MGI:3588845 (PMID:32049342) RGD PMID:32049342 NCBI chr 2:198,414,568...198,431,532
Ensembl chr 2:195,726,762...195,735,866 		JBrowse link
G Hus1 HUS1 checkpoint clamp component acts_upstream_of_or_within ISO MGI:1927769 (PMID:11790307), (PMID:12529385) RGD PMID:11790307 PMID:12529385 NCBI chr14:87,902,458...87,917,221
Ensembl chr14:83,688,708...83,703,442 		JBrowse link
G Map2k7 mitogen activated protein kinase kinase 7 involved_in ISO
IEA		 (PMID:9535930)
GO_REF:0000107		 RGD
Ensembl		 PMID:9535930 GO_REF:0000107 NCBI chr12:7,389,032...7,398,377
Ensembl chr12:2,591,219...2,604,222 		JBrowse link
G Map4k3 mitogen-activated protein kinase kinase kinase kinase 3 involved_in ISO
IEA
ISS		 (PMID:9275185)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:9275185 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:20,029,246...20,198,583
Ensembl chr 6:14,277,121...14,446,334 		JBrowse link
G Mapk8 mitogen-activated protein kinase 8 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:14967141)
GO_REF:0000107		 RGD
Ensembl		 PMID:14967141 GO_REF:0000107 NCBI chr16:8,645,171...8,728,225
Ensembl chr16:8,638,924...8,721,981 		JBrowse link
G Men1 menin 1 involved_in ISO
IEA		 (PMID:16690369)
GO_REF:0000107		 RGD
Ensembl		 PMID:16690369 GO_REF:0000107 NCBI chr 1:213,068,166...213,074,132
Ensembl chr 1:203,639,000...203,644,871 		JBrowse link
G Msh6 mutS homolog 6 acts_upstream_of_or_within ISO MGI:1858014 (PMID:14632208) RGD PMID:14632208 NCBI chr 6:12,316,190...12,333,505
Ensembl chr 6:6,562,632...6,579,956 		JBrowse link
G Pclaf PCNA clamp associated factor involved_in ISO
ISS		 (PMID:23000965)
GO_REF:0000024		 RGD
UniProt		 PMID:23000965 GO_REF:0000024 NCBI chr 8:75,311,028...75,328,108
Ensembl chr 8:66,420,587...66,432,994
Ensembl chr 8:66,420,587...66,432,994 		JBrowse link
G Pmaip1 phorbol-12-myristate-13-acetate-induced protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2678372 (PMID:12952892)		 Ensembl
RGD		 PMID:12952892 GO_REF:0000107 NCBI chr18:62,255,970...62,262,384
Ensembl chr18:59,986,017...59,992,429 		JBrowse link
G Pml PML nuclear body scaffold acts_upstream_of_or_within ISO MGI:104662 (PMID:15626733) RGD PMID:15626733 NCBI chr 8:67,523,164...67,557,801
Ensembl chr 8:58,628,837...58,658,971 		JBrowse link
G Primpol primase and DNA directed polymerase involved_in ISO
IBA		 (PMID:24240614), (PMID:24267451)
GO_REF:0000033		 RGD
GO_Central		 PMID:24240614 PMID:24267451 GO_REF:0000033 NCBI chr16:52,413,894...52,450,975
Ensembl chr16:45,681,326...45,715,565 		JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in ISO (PMID:20647423) RGD PMID:20647423 NCBI chr 2:55,967,766...56,003,450
Ensembl chr 2:54,240,137...54,275,978 		JBrowse link
G Rad18 RAD18 E3 ubiquitin protein ligase acts_upstream_of_or_within ISO MGI:3835812 (PMID:12509447) RGD PMID:12509447 NCBI chr 4:147,291,463...147,376,904
Ensembl chr 4:145,735,654...145,821,069 		JBrowse link
G Rev1 REV1, DNA directed polymerase involved_in ISO (PMID:11485998) RGD PMID:11485998 NCBI chr 9:47,773,907...47,847,554
Ensembl chr 9:40,278,101...40,351,576 		JBrowse link
G Ro60 Ro60, Y RNA binding protein acts_upstream_of_or_within ISO MGI:2670227 (PMID:12788971), (PMID:14680639) RGD PMID:12788971 PMID:14680639 NCBI chr13:58,049,838...58,070,828
Ensembl chr13:55,499,534...55,520,504 		JBrowse link
G Rpain RPA interacting protein acts_upstream_of_or_within ISO (PMID:16135809) RGD PMID:16135809 NCBI chr10:56,190,975...56,198,490
Ensembl chr10:55,692,417...55,699,933 		JBrowse link
G Sirt6 sirtuin 6 involved_in ISO (PMID:19109893) RGD PMID:19109893 NCBI chr 7:8,733,056...8,738,543
Ensembl chr 7:8,082,364...8,098,914 		JBrowse link
G Sprtn SprT-like N-terminal domain involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:22681887), (PMID:22894931), (PMID:22902628)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:22681887 PMID:22894931 PMID:22902628 GO_REF:0000024 GO_REF:0000107 NCBI chr19:69,754,989...69,762,240
Ensembl chr19:52,857,866...52,864,864 		JBrowse link
G Tipin timeless interacting protein acts_upstream_of_or_within ISO (PMID:17141802) RGD PMID:17141802 NCBI chr 8:73,676,020...73,696,620
Ensembl chr 8:64,780,828...64,801,352
Ensembl chr 9:64,780,828...64,801,352 		JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within IEP
ISO		 MGI:1857590|MGI:1926340 (PMID:10815637), (PMID:11092819), (PMID:12952892), (PMID:14744935) RGD PMID:10815637 PMID:11092819 PMID:12952892 PMID:14744935 PMID:17724205 RGD:2290562 NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
G Tp53i13 tumor protein p53 inducible protein 13 involved_in ISO (PMID:14767535) RGD PMID:14767535 NCBI chr10:62,854,851...62,861,241
Ensembl chr10:62,356,722...62,361,343 		JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO MGI:3052754 (PMID:28351661) RGD PMID:28351661 NCBI chr 8:118,585,082...118,586,382
Ensembl chr 8:109,706,613...109,708,796 		JBrowse link
G Trim32 tripartite motif-containing 32 involved_in ISO (PMID:16816390) RGD PMID:16816390 NCBI chr 5:84,020,604...84,031,483
Ensembl chr 5:78,999,389...79,022,018 		JBrowse link
G Tyr tyrosinase IEP RGD PMID:6175546 RGD:8694330 NCBI chr 1:150,527,687...150,622,857
Ensembl chr 1:141,115,036...141,210,207 		JBrowse link
G Uaca uveal autoantigen with coiled-coil domains and ankyrin repeats acts_upstream_of_or_within ISO MGI:3043446 (PMID:15271982) RGD PMID:15271982 NCBI chr 8:70,155,059...70,243,416
Ensembl chr 8:61,259,477...61,347,789 		JBrowse link
G Ube2a ubiquitin-conjugating enzyme E2A involved_in ISO UniProtKB:P06104 (PMID:1717990) RGD PMID:1717990 NCBI chr  X:120,979,993...120,990,773
Ensembl chr  X:116,113,875...116,125,070 		JBrowse link
G Ube2b ubiquitin-conjugating enzyme E2B involved_in ISO
IEA		 UniProtKB:P06104 (PMID:1717990)
GO_REF:0000107		 RGD
Ensembl		 PMID:1717990 GO_REF:0000107 NCBI chr10:36,749,365...36,764,335
Ensembl chr10:36,248,438...36,264,665 		JBrowse link
G Ube4b ubiquitination factor E4B involved_in ISO (PMID:11802788) RGD PMID:11802788 NCBI chr 5:165,049,897...165,153,572
Ensembl chr 5:159,766,829...159,870,509 		JBrowse link
G Usf1 upstream transcription factor 1 involved_in ISO (PMID:15358786) RGD PMID:15358786 NCBI chr13:86,377,679...86,385,523
Ensembl chr13:83,822,035...83,854,885 		JBrowse link
G Usp1 ubiquitin specific peptidase 1 involved_in ISO
ISS		 (PMID:18082604)
GO_REF:0000024		 RGD
UniProt		 PMID:18082604 GO_REF:0000024 NCBI chr 5:118,703,056...118,714,426
Ensembl chr 5:113,587,564...113,598,932 		JBrowse link
G Uvssa UV-stimulated scaffold protein A involved_in ISO
IBA
IEA
ISS		 (PMID:22466610), (PMID:22466611), (PMID:22466612)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024		 RGD
GO_Central
Ensembl
UniProt		 PMID:22466610 PMID:22466611 PMID:22466612 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr14:81,535,179...81,576,444
Ensembl chr14:77,314,056...77,351,903 		JBrowse link
G Xpa XPA, DNA damage recognition and repair factor acts_upstream_of_or_within ISO MGI:1857939 (PMID:10843671) RGD PMID:10843671 NCBI chr 5:65,227,281...65,275,784
Ensembl chr 5:60,431,673...60,475,726 		JBrowse link
G Zranb3 zinc finger RANBP2-type containing 3 involved_in ISO (PMID:22704558) RGD PMID:22704558 NCBI chr13:41,993,110...42,148,298
Ensembl chr13:39,440,889...39,595,670 		JBrowse link
response to UV-A term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 involved_in ISO
IEA		 (PMID:18483258)
GO_REF:0000107		 RGD
Ensembl		 PMID:18483258 GO_REF:0000107 NCBI chr 6:137,534,810...137,555,131
Ensembl chr 6:131,713,720...131,733,921 		JBrowse link
G Ccnd1 cyclin D1 involved_in ISO
IEA
ISS		 (PMID:18483258)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:18483258 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:209,518,288...209,527,986
Ensembl chr 1:200,089,002...200,098,602 		JBrowse link
G Cryaa crystallin, alpha A acts_upstream_of_or_within ISO MGI:1858025 (PMID:9813033) RGD PMID:9813033 NCBI chr20:9,784,872...9,788,656
Ensembl chr20:9,783,605...9,787,349 		JBrowse link
G Egfr epidermal growth factor receptor involved_in ISO (PMID:18483258) RGD PMID:18483258 NCBI chr14:95,378,626...95,551,358
Ensembl chr14:91,177,067...91,344,382 		JBrowse link
response to UV-B term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2, apoptosis regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857430 (PMID:10200548)		 Ensembl
RGD		 PMID:10200548 GO_REF:0000107 NCBI chr13:23,204,464...23,366,900
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743 		JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor acts_upstream_of_or_within ISO MGI:1932102 (PMID:10850428), (PMID:17145777) RGD PMID:10850428 PMID:17145777 NCBI chr16:7,771,311...7,841,895
Ensembl chr16:7,765,013...7,835,587 		JBrowse link
G Hmgn1 high mobility group nucleosome binding domain 1 acts_upstream_of_or_within ISO MGI:3590648 (PMID:12660172) RGD PMID:12660172 NCBI chr11:48,891,813...48,897,732
Ensembl chr11:35,422,328...35,428,254 		JBrowse link
G Il12a interleukin 12A involved_in ISO
IEA		 (PMID:8992506)
GO_REF:0000107		 RGD
Ensembl		 PMID:8992506 GO_REF:0000107 NCBI chr 2:155,275,734...155,282,997
Ensembl chr 2:152,965,769...152,972,734 		JBrowse link
G Il12b interleukin 12B involved_in ISO (PMID:8992506) RGD PMID:8992506 NCBI chr10:29,390,300...29,405,194
Ensembl chr10:28,893,008...28,902,903 		JBrowse link
G Ivl involucrin involved_in ISO (PMID:16639001) RGD PMID:16639001 NCBI chr 2:180,842,307...180,854,646
Ensembl chr 2:178,147,061...178,149,100 		JBrowse link
G Msh2 mutS homolog 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857940 (PMID:15166087)		 Ensembl
RGD		 PMID:15166087 GO_REF:0000107 NCBI chr 6:12,567,368...12,626,534
Ensembl chr 6:6,813,795...6,872,938 		JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit involved_in ISO (PMID:15616591) RGD PMID:15616591 NCBI chr 1:212,354,336...212,364,815
Ensembl chr 1:202,924,945...202,935,484 		JBrowse link
G Tp53 tumor protein p53 IEP RGD PMID:22559303 RGD:8547754 NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
G Xpc XPC complex subunit, DNA damage recognition and repair factor acts_upstream_of_or_within ISO MGI:1859840 (PMID:15010313) RGD PMID:15010313 NCBI chr 4:125,550,833...125,578,084
Ensembl chr 4:123,993,666...124,021,010 		JBrowse link
response to UV-C term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bak1 BCL2-antagonist/killer 1 IEP RGD PMID:19520675 RGD:2316118 NCBI chr20:5,102,334...5,111,615
Ensembl chr20:5,100,480...5,109,264 		JBrowse link
G Bcl3 BCL3, transcription coactivator involved_in ISO (PMID:16384933) RGD PMID:16384933 NCBI chr 1:88,599,321...88,613,555
Ensembl chr 1:79,471,369...79,485,607 		JBrowse link
G Brca2 BRCA2, DNA repair associated involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1930616 (PMID:9660919)		 Ensembl
RGD		 PMID:9660919 GO_REF:0000107 NCBI chr12:4,895,092...4,939,340
Ensembl chr12:59,819...100,567 		JBrowse link
G Dcun1d3 defective in cullin neddylation 1 domain containing 3 involved_in ISO
ISS		 (PMID:18823379)
GO_REF:0000024		 RGD
UniProt		 PMID:18823379 GO_REF:0000024 NCBI chr 1:183,674,364...183,717,002
Ensembl chr 1:66,494,848...66,496,343
Ensembl chr 1:66,494,848...66,496,343 		JBrowse link
G Ercc5 ERCC excision repair 5, endonuclease involved_in ISO (PMID:17208056) RGD PMID:17208056 NCBI chr 9:53,801,471...53,846,611
Ensembl chr 9:46,309,389...46,354,472 		JBrowse link
G Hmgn1 high mobility group nucleosome binding domain 1 acts_upstream_of_or_within ISO (PMID:12660172) RGD PMID:12660172 NCBI chr11:48,891,813...48,897,732
Ensembl chr11:35,422,328...35,428,254 		JBrowse link
G Map3k4 mitogen activated protein kinase kinase kinase 4 involved_in ISO (PMID:9305639) RGD PMID:9305639 NCBI chr 1:50,977,870...51,067,117
Ensembl chr 1:48,431,830...48,519,358 		JBrowse link
G Polh DNA polymerase eta involved_in ISO (PMID:17563354) RGD PMID:17563354 NCBI chr 9:22,275,929...22,310,576
Ensembl chr 9:14,777,888...14,812,723 		JBrowse link
G Wrn WRN RecQ like helicase involved_in ISO (PMID:17563354) RGD PMID:17563354 NCBI chr16:65,466,552...65,602,951
Ensembl chr16:58,763,504...58,895,450 		JBrowse link
G Yy1 YY1 transcription factor involved_in ISO (PMID:18026119) RGD PMID:18026119 NCBI chr 6:133,471,615...133,500,875
Ensembl chr 6:127,707,596...127,732,747 		JBrowse link
response to X-ray term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa1 annexin A1 IEP RGD PMID:9269316 RGD:2306948 NCBI chr 1:227,287,713...227,306,739
Ensembl chr 1:217,861,175...217,877,343 		JBrowse link
G Blm BLM RecQ like helicase involved_in ISO (PMID:11309417) RGD PMID:11309417 NCBI chr 1:143,819,072...143,905,300
Ensembl chr 1:134,409,857...134,484,312 		JBrowse link
G Brca2 BRCA2, DNA repair associated involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1930616|MGI:2177226|MGI:2448890 (PMID:16859999), (PMID:9398843), (PMID:9660919)		 Ensembl
RGD		 PMID:9398843 PMID:9660919 PMID:16859999 GO_REF:0000107 NCBI chr12:4,895,092...4,939,340
Ensembl chr12:59,819...100,567 		JBrowse link
G Brcc3 BRCA1/BRCA2-containing complex subunit 3 acts_upstream_of_or_within ISO (PMID:14636569) RGD PMID:14636569 NCBI chr 9:2,073,927...2,076,469
Ensembl chr 9:1,986,575...1,991,080 		JBrowse link
G Casp3 caspase 3 IEP RGD PMID:18239382 RGD:2293328 NCBI chr16:52,395,539...52,413,794
Ensembl chr16:45,662,910...45,684,648 		JBrowse link
G Ccnd1 cyclin D1 IEP RGD PMID:17148264 RGD:1601086 NCBI chr 1:209,518,288...209,527,986
Ensembl chr 1:200,089,002...200,098,602 		JBrowse link
G Cdkn1a cyclin-dependent kinase inhibitor 1A IEP RGD PMID:18413982 RGD:8662408 NCBI chr20:7,150,820...7,161,373
Ensembl chr20:7,149,217...7,159,585 		JBrowse link
G Col2a1 collagen type II alpha 1 chain IEP RGD PMID:17549535 RGD:8661655 NCBI chr 7:130,977,561...131,006,627
Ensembl chr 7:129,098,786...129,127,546 		JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit acts_upstream_of_or_within ISO MGI:2183944 (PMID:15979950) RGD PMID:15979950 NCBI chr 1:88,099,308...88,135,966
Ensembl chr 1:78,996,390...79,007,963 		JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor acts_upstream_of_or_within ISO MGI:1932102 (PMID:15979950), (PMID:17145777) RGD PMID:15979950 PMID:17145777 NCBI chr16:7,771,311...7,841,895
Ensembl chr16:7,765,013...7,835,587 		JBrowse link
G Ercc8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit acts_upstream_of_or_within ISO MGI:2449180 (PMID:17145777) RGD PMID:17145777 NCBI chr 2:41,380,901...41,418,294
Ensembl chr 2:39,647,452...39,684,859 		JBrowse link
G Fga fibrinogen alpha chain IEP RGD PMID:4170424 RGD:11040910 NCBI chr 2:170,672,169...170,679,572
Ensembl chr 2:168,374,120...168,381,528 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha IEP RGD PMID:15161688 RGD:9068912 NCBI chr 6:98,357,788...98,405,068
Ensembl chr 6:92,624,390...92,669,261 		JBrowse link
G Hp haptoglobin IEP RGD PMID:12379430 RGD:1626377 NCBI chr19:54,449,151...54,453,701
Ensembl chr19:37,539,627...37,544,523 		JBrowse link
G Il7 interleukin 7 IEP RGD PMID:15799696 RGD:10402940 NCBI chr 2:96,142,523...96,186,282
Ensembl chr 2:94,234,766...94,280,075 		JBrowse link
G Kars1 lysyl-tRNA synthetase 1 IDA RGD PMID:4001316 RGD:12910553 NCBI chr19:56,867,096...56,886,151
Ensembl chr19:39,957,846...39,977,632 		JBrowse link
G Lcn10 lipocalin 10 acts_upstream_of_or_within ISO (PMID:35757735) RGD PMID:35757735 NCBI chr 3:28,888,901...28,892,454
Ensembl chr 3:8,490,781...8,494,333 		JBrowse link
G Lig4 DNA ligase 4 involved_in ISO (PMID:9809069) RGD PMID:9809069 NCBI chr16:86,220,345...86,228,930
Ensembl chr16:79,518,312...79,527,040 		JBrowse link
G Lrp2 LDL receptor related protein 2 IDA RGD PMID:12121845 RGD:1641839 NCBI chr 3:74,597,148...74,754,535
Ensembl chr 3:54,189,308...54,346,708 		JBrowse link
G Msh2 mutS homolog 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:12687013)		 Ensembl
RGD		 PMID:12687013 GO_REF:0000107 NCBI chr 6:12,567,368...12,626,534
Ensembl chr 6:6,813,795...6,872,938 		JBrowse link
G Pdxk pyridoxal kinase IEP RGD PMID:2928487 RGD:2303016 NCBI chr20:10,209,975...10,232,012
Ensembl chr20:10,210,289...10,232,110 		JBrowse link
G Pmaip1 phorbol-12-myristate-13-acetate-induced protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2678372 (PMID:12952892)		 Ensembl
RGD		 PMID:12952892 GO_REF:0000107 NCBI chr18:62,255,970...62,262,384
Ensembl chr18:59,986,017...59,992,429 		JBrowse link
G Rad51 RAD51 recombinase IEP RGD PMID:17148264 RGD:1601086 NCBI chr 3:126,554,210...126,578,888
Ensembl chr 3:106,100,381...106,125,035 		JBrowse link
G Thbd thrombomodulin IEP RGD PMID:12057911 RGD:634507 NCBI chr 3:156,316,526...156,320,178
Ensembl chr 3:135,862,835...135,867,193 		JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within
involved_in		 IEP
ISO
IEA
IMP		 MGI:1857263 (PMID:11884608), (PMID:22821713)
GO_REF:0000107		 RGD
Ensembl		 PMID:11884608 PMID:22821713 PMID:17699727 PMID:28834365 GO_REF:0000107, RGD:2290567, RGD:14995504 NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
G Vwf von Willebrand factor IEP RGD PMID:8811296 RGD:11079207 NCBI chr 4:160,042,900...160,177,757
Ensembl chr 4:158,360,152...158,491,539 		JBrowse link
G Xrcc2 X-ray repair cross complementing 2 acts_upstream_of_or_within ISO MGI:2662686 (PMID:15979950) RGD PMID:15979950 NCBI chr 4:10,157,130...10,237,089
Ensembl chr 4:9,423,898...9,442,482 		JBrowse link
G Xrcc4 X-ray repair cross complementing 4 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:9242410)
MGI:1926771 (PMID:9875844)
GO_REF:0000033		 RGD
GO_Central		 PMID:9242410 PMID:9875844 GO_REF:0000033 NCBI chr 2:22,686,506...22,932,929
Ensembl chr 2:20,951,200...21,197,808 		JBrowse link
G Xrra1 X-ray radiation resistance associated 1 involved_in ISO (PMID:12908878) RGD PMID:12908878 NCBI chr 1:163,595,403...163,660,003
Ensembl chr 1:154,183,377...154,247,895 		JBrowse link
short-day photoperiodism term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Npy neuropeptide Y IEP RGD PMID:19490367 RGD:6480663 NCBI chr 4:80,212,111...80,219,310
Ensembl chr 4:78,881,264...78,888,495 		JBrowse link
UV protection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cat catalase involved_in ISO (PMID:16644728), (PMID:17053817) RGD PMID:16644728 PMID:17053817 NCBI chr 3:110,297,340...110,329,526
Ensembl chr 3:89,842,399...89,874,478 		JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit acts_upstream_of_or_within ISO MGI:2158940|MGI:3050065|MGI:3692923 (PMID:10454634), (PMID:16682947), (PMID:8275084) RGD PMID:8275084 PMID:10454634 PMID:16682947 NCBI chr 1:88,099,308...88,135,966
Ensembl chr 1:78,996,390...79,007,963 		JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit acts_upstream_of_or_within ISO MGI:2183949 (PMID:9651581) RGD PMID:9651581 NCBI chr 1:88,161,342...88,175,102
Ensembl chr 1:79,033,326...79,047,102 		JBrowse link
G Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit acts_upstream_of_or_within ISO UniProtKB:A0MQ57 (PMID:1747940) RGD PMID:1747940 NCBI chr18:24,157,831...24,188,543
Ensembl chr18:23,883,580...23,914,329 		JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit acts_upstream_of_or_within ISO MGI:3028660 (PMID:14729965) RGD PMID:14729965 NCBI chr10:2,926,085...2,958,176
Ensembl chr10:2,419,038...2,448,369
Ensembl chr10:2,419,038...2,448,369 		JBrowse link
G Ercc5 ERCC excision repair 5, endonuclease acts_upstream_of_or_within ISO (PMID:7510366), (PMID:8703115) RGD PMID:7510366 PMID:8703115 NCBI chr 9:53,801,471...53,846,611
Ensembl chr 9:46,309,389...46,354,472 		JBrowse link
G Gpx1 glutathione peroxidase 1 involved_in ISO
IEA		 (PMID:17097614)
GO_REF:0000107		 RGD
Ensembl		 PMID:17097614 GO_REF:0000107 NCBI chr 8:117,905,462...117,906,588
Ensembl chr 8:109,026,905...109,028,024 		JBrowse link
G Mfap4 microfibril associated protein 4 involved_in ISO (PMID:22355679) RGD PMID:22355679 NCBI chr10:46,666,552...46,669,613
Ensembl chr10:46,167,217...46,170,155 		JBrowse link
G Sdf4 stromal cell derived factor 4 involved_in IMP PMID:18355758 BHF-UCL PMID:18355758 RGD:8554427 NCBI chr 5:171,868,591...171,885,827
Ensembl chr 5:166,586,390...166,604,521 		JBrowse link
G Xpa XPA, DNA damage recognition and repair factor involved_in ISO (PMID:1601884) RGD PMID:1601884 NCBI chr 5:65,227,281...65,275,784
Ensembl chr 5:60,431,673...60,475,726 		JBrowse link
UV-damage excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr5 actin related protein 5 involved_in ISO (PMID:20855601) RGD PMID:20855601 NCBI chr 3:167,702,299...167,715,736
Ensembl chr 3:147,282,624...147,296,110 		JBrowse link
G Cul4b cullin 4B involved_in ISO (PMID:22334663) RGD PMID:22334663 NCBI chr  X:122,154,332...122,192,299
Ensembl chr  X:117,287,484...117,326,688 		JBrowse link
G Ddb1 damage-specific DNA binding protein 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:14751237), (PMID:22334663)		 Ensembl
RGD		 PMID:14751237 PMID:22334663 GO_REF:0000107 NCBI chr 1:216,677,810...216,703,605
Ensembl chr 1:207,252,890...207,278,676 		JBrowse link
G Ddb2 damage specific DNA binding protein 2 involved_in ISO (PMID:14751237), (PMID:22334663) RGD PMID:14751237 PMID:22334663 NCBI chr 3:97,640,923...97,667,617
Ensembl chr 3:77,185,109...77,207,631 		JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:88,099,308...88,135,966
Ensembl chr 1:78,996,390...79,007,963 		JBrowse link
G H2ac25 H2A clustered histone 25 involved_in ISO (PMID:22334663) RGD PMID:22334663 NCBI chr10:44,233,283...44,234,835
Ensembl chr10:43,733,668...43,744,874 		JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in ISO (PMID:20855601) RGD PMID:20855601 NCBI chr 3:126,822,280...126,919,532
Ensembl chr 3:106,368,455...106,467,911 		JBrowse link
G Mc1r melanocortin 1 receptor involved_in ISO (PMID:18292087) RGD PMID:18292087 NCBI chr19:68,360,950...68,363,877
Ensembl chr19:51,453,239...51,454,192 		JBrowse link
G Sirt1 sirtuin 1 involved_in ISO
IEA		 (PMID:20670893)
GO_REF:0000107		 RGD
Ensembl		 PMID:20670893 GO_REF:0000107 NCBI chr20:25,305,953...25,328,000
Ensembl chr20:25,306,917...25,329,260 		JBrowse link
G Trim17 tripartite motif-containing 17 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr10:44,242,688...44,250,504
Ensembl chr10:43,740,604...43,750,919 		JBrowse link
G Xpa XPA, DNA damage recognition and repair factor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:65,227,281...65,275,784
Ensembl chr 5:60,431,673...60,475,726 		JBrowse link
G Xpc XPC complex subunit, DNA damage recognition and repair factor involved_in ISO (PMID:8077226)
(PMID:22431748)		 RGD PMID:8077226 PMID:22431748 NCBI chr 4:125,550,833...125,578,084
Ensembl chr 4:123,993,666...124,021,010 		JBrowse link
visual behavior term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dynlrb1 dynein light chain roadblock-type 1 involved_in IDA PMID:10816553 UniProt PMID:10816553 RGD:633064 NCBI chr 3:164,197,892...164,224,409
Ensembl chr 3:143,742,586...143,764,227 		JBrowse link
G Gnat1 G protein subunit alpha transducin 1 acts_upstream_of_or_within ISO MGI:2152779 (PMID:20844144) RGD PMID:20844144 NCBI chr 8:117,229,575...117,234,311
Ensembl chr 8:108,350,935...108,355,671 		JBrowse link
G Gnat2 G protein subunit alpha transducin 2 acts_upstream_of_or_within ISO MGI:3588845 (PMID:20844144), (PMID:30225342) RGD PMID:20844144 PMID:30225342 NCBI chr 2:198,414,568...198,431,532
Ensembl chr 2:195,726,762...195,735,866 		JBrowse link
G Slc1a2 solute carrier family 1 member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2449707 (PMID:16197522)		 Ensembl
RGD		 PMID:16197522 GO_REF:0000107 NCBI chr 3:109,460,109...109,590,445
Ensembl chr 3:89,005,129...89,126,498 		JBrowse link
visual learning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca7 ATP binding cassette subfamily A member 7 involved_in ISO (PMID:27030769) RGD PMID:27030769 NCBI chr 7:10,342,092...10,362,094
Ensembl chr 7:9,691,449...9,711,425 		JBrowse link
G Abcc8 ATP binding cassette subfamily C member 8 IMP RGD PMID:24114458 RGD:10003028 NCBI chr 1:105,734,992...105,816,272
Ensembl chr 1:96,598,647...96,679,510 		JBrowse link
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:96610 (PMID:22357865) RGD PMID:22357865 NCBI chr13:71,223,902...71,319,770
Ensembl chr13:68,673,722...68,839,742 		JBrowse link
G Adam2 ADAM metallopeptidase domain 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3625523 (PMID:16504143)		 Ensembl
RGD		 PMID:16504143 GO_REF:0000107 NCBI chr15:44,418,191...44,459,570
Ensembl chr15:40,242,783...40,283,952 		JBrowse link
G Adra1b adrenoceptor alpha 1B acts_upstream_of_or_within ISO MGI:2148638 (PMID:11222061) RGD PMID:11222061 NCBI chr10:28,756,461...28,874,831
Ensembl chr10:28,255,025...28,312,919 		JBrowse link
G Ap1s2 adaptor related protein complex 1 subunit sigma 2 acts_upstream_of_or_within ISO MGI:5620801 (PMID:20203623) RGD PMID:20203623 NCBI chr  X:34,204,601...34,230,819
Ensembl chr  X:30,572,751...30,597,262 		JBrowse link
G App amyloid beta precursor protein involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 GO_REF:0000024
MGI:2136847 (PMID:10338291)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:10338291 GO_REF:0000024 GO_REF:0000107 NCBI chr11:37,506,207...37,724,351
Ensembl chr11:24,019,778...24,236,561 		JBrowse link
G Atp1a2 ATPase Na+/K+ transporting subunit alpha 2 acts_upstream_of_or_within ISO MGI:2451291 (PMID:17234593) RGD PMID:17234593 NCBI chr13:87,261,964...87,286,911
Ensembl chr13:84,729,601...84,754,544 		JBrowse link
G Atp1a3 ATPase Na+/K+ transporting subunit alpha 3 acts_upstream_of_or_within ISO MGI:3696954|MGI:4356167|MGI:6163502 (PMID:17234593), (PMID:26463346), (PMID:26501181), (PMID:27549929) RGD PMID:17234593 PMID:26463346 PMID:26501181 PMID:27549929 NCBI chr 1:89,700,645...89,729,782
Ensembl chr 1:80,572,796...80,601,918 		JBrowse link
G Atxn1 ataxin 1 acts_upstream_of_or_within ISO MGI:2181805|MGI:2429435 (PMID:20628574), (PMID:9651231) RGD PMID:9651231 PMID:20628574 NCBI chr17:18,943,397...19,354,751
Ensembl chr17:18,737,533...19,142,360 		JBrowse link
G B3gat1 beta-1,3-glucuronyltransferase 1 acts_upstream_of ISO MGI:3759445 (PMID:12032138) RGD PMID:12032138 NCBI chr 8:33,362,791...33,390,446
Ensembl chr 8:25,087,547...25,113,395 		JBrowse link
G B4galt2 beta-1,4-galactosyltransferase 2 acts_upstream_of_or_within ISO MGI:3849305 (PMID:19265195) RGD PMID:19265195 NCBI chr 5:136,697,981...136,707,783
Ensembl chr 5:131,412,541...131,421,013 		JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO MGI:3620008|MGI:3622450 (PMID:16342120) RGD PMID:16342120 NCBI chr 4:69,329,772...69,476,931
Ensembl chr 4:68,384,649...68,510,463 		JBrowse link
G Cacna1c calcium voltage-gated channel subunit alpha1 C acts_upstream_of_or_within ISO MGI:2674114 (PMID:16251435) RGD PMID:16251435 NCBI chr 4:153,431,169...154,051,932
Ensembl chr 4:151,764,138...152,379,648 		JBrowse link
G Cacna1e calcium voltage-gated channel subunit alpha1 E acts_upstream_of_or_within ISO MGI:2179732 (PMID:11263998) RGD PMID:11263998 NCBI chr13:69,125,048...69,613,795
Ensembl chr13:66,581,920...66,894,450 		JBrowse link
G Cck cholecystokinin IMP RGD PMID:12450740 RGD:1626100 NCBI chr 8:130,031,012...130,037,702
Ensembl chr 8:121,153,500...121,160,084 		JBrowse link
G Cdk5 cyclin-dependent kinase 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3720892|MGI:3720937 (PMID:17529984)		 Ensembl
RGD		 PMID:17529984 GO_REF:0000107 NCBI chr 4:11,647,098...11,651,606
Ensembl chr 4:10,754,687...10,760,112 		JBrowse link
G Chrd chordin involved_in ISO MGI:2157350 (PMID:17634368) RGD PMID:17634368 NCBI chr11:93,676,400...93,685,584
Ensembl chr11:80,171,994...80,180,673 		JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit involved_in
acts_upstream_of_or_within		 ISO (PMID:15964197)
MGI:1926253 (PMID:10064590), (PMID:12876201)		 RGD PMID:10064590 PMID:12876201 PMID:15964197 NCBI chr 2:177,479,091...177,487,306
Ensembl chr 2:175,181,402...175,189,619 		JBrowse link
G Ckap5 cytoskeleton associated protein 5 acts_upstream_of_or_within ISO MGI:2177650|MGI:5570192 (PMID:23936366) RGD PMID:23936366 NCBI chr 3:97,946,966...98,049,050
Ensembl chr 3:77,491,276...77,593,264 		JBrowse link
G Comt catechol-O-methyltransferase acts_upstream_of_or_within ISO (PMID:24509724), (PMID:27388330) RGD PMID:24509724 PMID:27388330 NCBI chr11:96,072,371...96,091,956
Ensembl chr11:82,568,025...82,587,642 		JBrowse link
G Creb1 cAMP responsive element binding protein 1 IMP RGD PMID:25031400 RGD:10059390 NCBI chr 9:73,397,333...73,466,339
Ensembl chr 9:65,903,547...65,970,816 		JBrowse link
G Crhr1 corticotropin releasing hormone receptor 1 IMP postnatal blockade improves adult learning and memory RGD PMID:15932935 RGD:1626241 NCBI chr10:89,540,192...89,583,466
Ensembl chr10:89,040,203...89,083,481 		JBrowse link
G Ctns cystinosin, lysosomal cystine transporter acts_upstream_of_or_within ISO MGI:2388945 (PMID:17977621) RGD PMID:17977621 NCBI chr10:58,300,069...58,315,725
Ensembl chr10:57,801,456...57,817,120 		JBrowse link
G Dbh dopamine beta-hydroxylase involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857556 (PMID:9189272)		 Ensembl
RGD		 PMID:9189272 GO_REF:0000107 NCBI chr 3:30,886,313...30,903,313
Ensembl chr 3:10,488,260...10,505,248 		JBrowse link
G Dcdc2 doublecortin domain containing 2 acts_upstream_of_or_within ISO MGI:5288003 (PMID:21883923)
MGI:5288003 (PMID:25130614)		 RGD PMID:21883923 PMID:25130614 NCBI chr17:40,274,009...40,459,757
Ensembl chr17:39,845,952...40,030,743 		JBrowse link
G Ddhd2 DDHD domain containing 2 acts_upstream_of_or_within ISO MGI:5662251 (PMID:25267624) RGD PMID:25267624 NCBI chr16:73,022,136...73,051,746
Ensembl chr16:66,319,466...66,349,023 		JBrowse link
G Deaf1 DEAF1 transcription factor involved_in ISO (PMID:24726472) RGD PMID:24726472 NCBI chr 1:205,831,428...205,865,106
Ensembl chr 1:196,401,857...196,435,541 		JBrowse link
G Drd1 dopamine receptor D1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857158|MGI:2159306 (PMID:10585522), (PMID:10884517), (PMID:15684065), (PMID:9692749)		 Ensembl
RGD		 PMID:9692749 PMID:10585522 PMID:10884517 PMID:15684065 GO_REF:0000107 NCBI chr17:10,545,488...10,550,029
Ensembl chr17:10,540,558...10,545,002 		JBrowse link
G Drd2 dopamine receptor D2 acts_upstream_of_or_within ISO MGI:2388386 (PMID:12097513) RGD PMID:12097513 NCBI chr 8:58,605,403...58,669,339
Ensembl chr 8:49,708,927...49,772,875 		JBrowse link
G Drd3 dopamine receptor D3 acts_upstream_of_or_within ISO MGI:2388387 (PMID:12097513) RGD PMID:12097513 NCBI chr11:70,385,586...70,437,793
Ensembl chr11:56,879,689...56,940,596 		JBrowse link
G Drd5 dopamine receptor D5 IMP RGD PMID:17142305 RGD:1600982 NCBI chr14:76,700,244...76,703,344
Ensembl chr14:72,489,347...72,490,774 		JBrowse link
G Foxb1 forkhead box B1 involved_in ISO (PMID:15654859) RGD PMID:15654859 NCBI chr 8:79,288,161...79,290,781
Ensembl chr 8:70,408,186...70,409,781 		JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 acts_upstream_of_or_within ISO MGI:1928279|MGI:1928283|MGI:1928284|MGI:2177650|MGI:2448952|MGI:3611337|MGI:97306 (PMID:10818139), (PMID:16611824), (PMID:17313573), (PMID:8980238), (PMID:9054942), (PMID:9246451) RGD PMID:8980238 PMID:9054942 PMID:9246451 PMID:10818139 PMID:16611824 More... NCBI chr 3:28,501,836...28,528,754
Ensembl chr 3:8,103,680...8,130,603 		JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1928285 (PMID:7816096)		 Ensembl
RGD		 PMID:7816096 GO_REF:0000107 NCBI chr10:6,136,458...6,560,003
Ensembl chr10:5,631,369...6,044,637 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2677899 (PMID:12972594)		 Ensembl
RGD		 PMID:12972594 GO_REF:0000107 NCBI chr 6:98,357,788...98,405,068
Ensembl chr 6:92,624,390...92,669,261 		JBrowse link
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:97306 (PMID:16271875)		 Ensembl
RGD		 PMID:16271875 GO_REF:0000107 NCBI chr 2:29,732,163...29,754,276
Ensembl chr 2:27,997,525...28,019,703 		JBrowse link
G Hrh1 histamine receptor H 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2182945 (PMID:17145090)		 Ensembl
RGD		 PMID:17145090 GO_REF:0000107 NCBI chr 4:149,120,511...149,204,267
Ensembl chr 4:147,645,995...147,647,455 		JBrowse link
G Hrh2 histamine receptor H 2 acts_upstream_of_or_within ISO MGI:2182949 (PMID:17145090) RGD PMID:17145090 NCBI chr17:10,371,083...10,412,979
Ensembl chr17:10,368,298...10,407,631 		JBrowse link
G Htt huntingtin acts_upstream_of_or_within ISO MGI:2177743 (PMID:7774020) RGD PMID:7774020 NCBI chr14:80,070,456...80,219,668
Ensembl chr14:75,845,836...75,995,070 		JBrowse link
G Idua alpha-L-iduronidase acts_upstream_of_or_within ISO MGI:2176236 (PMID:18022143) RGD PMID:18022143 NCBI chr14:1,175,994...1,203,913
Ensembl chr14:1,032,171...1,046,522 		JBrowse link
G Ift20 intraflagellar transport 20 acts_upstream_of_or_within ISO MGI:3817268 (PMID:21734285) RGD PMID:21734285 NCBI chr10:63,930,629...63,936,174
Ensembl chr10:63,432,633...63,438,124 		JBrowse link
G Itgb1 integrin subunit beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2156945|MGI:2668659|MGI:87860 (PMID:22357865)		 Ensembl
RGD		 PMID:22357865 GO_REF:0000107 NCBI chr19:73,602,277...73,650,271
Ensembl chr19:56,705,171...56,753,195 		JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase IMP RGD PMID:11112797 RGD:2292520 NCBI chr14:32,901,615...32,978,895
Ensembl chr14:32,548,877...32,624,652 		JBrowse link
G Kmt2a lysine methyltransferase 2A acts_upstream_of_or_within ISO MGI:3839794 (PMID:25834037) RGD PMID:25834037 NCBI chr 8:54,013,547...54,089,219
Ensembl chr 8:45,118,814...45,193,181 		JBrowse link
G Kras KRAS proto-oncogene, GTPase acts_upstream_of_or_within ISO MGI:97306 (PMID:11793011) RGD PMID:11793011 NCBI chr 4:179,916,255...179,949,613 JBrowse link
G Lrrn4 leucine rich repeat neuronal 4 acts_upstream_of_or_within ISO MGI:5428888 (PMID:15870286) RGD PMID:15870286 NCBI chr 3:140,592,303...140,603,986
Ensembl chr 3:120,139,410...120,150,831 		JBrowse link
G Mecp2 methyl CpG binding protein 2 acts_upstream_of_or_within ISO MGI:2183727 (PMID:16399702) RGD PMID:16399702 NCBI chr  X:156,932,481...156,995,981
Ensembl chr  X:151,789,930...151,844,689 		JBrowse link
G Meis2 Meis homeobox 2 acts_upstream_of_or_within ISO (PMID:25834037) RGD PMID:25834037 NCBI chr 3:123,197,066...123,399,002
Ensembl chr 3:102,742,900...102,949,696 		JBrowse link
G Mtor mechanistic target of rapamycin kinase IMP RGD PMID:20599569 RGD:10041021 NCBI chr 5:164,167,985...164,277,438
Ensembl chr 5:158,884,804...158,994,311 		JBrowse link
G Ndrg4 NDRG family member 4 involved_in IEA
ISO		 GO_REF:0000107
(PMID:21636852)		 Ensembl
RGD		 PMID:21636852 GO_REF:0000107 NCBI chr19:9,357,470...9,393,465
Ensembl chr19:9,351,404...9,386,914 		JBrowse link
G Neto1 neuropilin and tolloid like 1 involved_in ISO (PMID:19243221) RGD PMID:19243221 NCBI chr18:81,905,455...82,028,730
Ensembl chr18:79,635,633...79,749,030 		JBrowse link
G Nf1 neurofibromin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
ISS		 GO_REF:0000107
MGI:1857478|MGI:95819|MGI:96159|MGI:96680 (PMID:11793011), (PMID:16271875), (PMID:9054942)
GO_REF:0000024		 Ensembl
RGD
HGNC-UCL		 PMID:9054942 PMID:11793011 PMID:16271875 GO_REF:0000024 GO_REF:0000107 NCBI chr10:64,803,986...65,037,086
Ensembl chr10:64,306,301...64,536,658 		JBrowse link
G Nlgn3 neuroligin 3 acts_upstream_of_or_within ISO MGI:3758949 (PMID:17823315) RGD PMID:17823315 NCBI chr  X:70,469,251...70,497,380
Ensembl chr  X:66,429,458...66,451,876 		JBrowse link
G Nog noggin involved_in IMP
ISO
IEA		 MGI:2157350 (PMID:17634368)
GO_REF:0000107		 RGD
Ensembl		 PMID:17634368 PMID:12740172 GO_REF:0000107, RGD:10423996 NCBI chr10:74,625,874...74,627,501
Ensembl chr10:74,128,712...74,130,339 		JBrowse link
G Nps neuropeptide S acts_upstream_of_or_within ISO (PMID:19429110) RGD PMID:19429110 NCBI chr 1:199,505,772...199,510,915
Ensembl chr 1:190,077,040...190,080,821 		JBrowse link
G Nptn neuroplastin IDA RGD PMID:21480899 RGD:9835376 NCBI chr 8:67,892,678...67,959,231
Ensembl chr 8:58,996,887...59,063,401 		JBrowse link
G Nts neurotensin IMP RGD PMID:20219557 RGD:9743918 NCBI chr 7:39,451,484...39,460,888
Ensembl chr 7:37,564,533...37,574,423 		JBrowse link
G Pde1b phosphodiesterase 1B acts_upstream_of_or_within ISO MGI:2676625|MGI:94860 (PMID:12077213), (PMID:17010100) RGD PMID:12077213 PMID:17010100 NCBI chr 7:136,505,834...136,533,034
Ensembl chr 7:134,627,322...134,654,580 		JBrowse link
G Pde8b phosphodiesterase 8B acts_upstream_of_or_within ISO (PMID:22925203) RGD PMID:22925203 NCBI chr 2:28,009,841...28,244,050
Ensembl chr 2:26,276,635...26,509,209 		JBrowse link
G Pianp PILR alpha associated neural protein acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:31511635)
GO_REF:0000107		 RGD
Ensembl		 PMID:31511635 GO_REF:0000107 NCBI chr 4:159,482,678...159,491,085
Ensembl chr 4:157,798,808...157,804,842 		JBrowse link
G Pias1 protein inhibitor of activated STAT, 1 IMP RGD PMID:25031400 RGD:10059390 NCBI chr 8:72,233,566...72,347,085
Ensembl chr 8:63,338,150...63,438,905 		JBrowse link
G Pln phospholamban involved_in ISS
ISO		 GO_REF:0000024
(PMID:38493225)		 UniProt
RGD		 PMID:38493225 GO_REF:0000024 NCBI chr20:33,166,512...33,182,241 JBrowse link
G Ppp1r1b protein phosphatase 1, regulatory (inhibitor) subunit 1B acts_upstream_of_or_within ISO MGI:97523 (PMID:17010100) RGD PMID:17010100 NCBI chr10:83,843,948...83,853,063
Ensembl chr10:83,347,731...83,356,775 		JBrowse link
G Ptprz1 protein tyrosine phosphatase, receptor type Z1 IEP RGD PMID:12737936 RGD:9590120 NCBI chr 4:52,363,006...52,560,905
Ensembl chr 4:51,397,601...51,595,218 		JBrowse link
G Rag1 recombination activating 1 IMP RGD PMID:22964459 RGD:12907572 NCBI chr 3:108,372,087...108,383,184
Ensembl chr 3:87,917,004...87,928,291 		JBrowse link
G Rgs14 regulator of G-protein signaling 14 involved_in IMP PMID:19574389 UniProt PMID:19574389 RGD:8553361 NCBI chr17:9,254,112...9,268,233
Ensembl chr17:9,249,019...9,263,104 		JBrowse link
G Ric8a RIC8 guanine nucleotide exchange factor A acts_upstream_of_or_within ISO MGI:3608888 (PMID:16221497) RGD PMID:16221497 NCBI chr 1:205,364,796...205,371,102
Ensembl chr 1:195,935,349...195,941,467 		JBrowse link
G Sct secretin acts_upstream_of_or_within ISO MGI:3815315 (PMID:21159798) RGD PMID:21159798 NCBI chr 1:205,812,435...205,813,246
Ensembl chr 1:196,382,856...196,383,658 		JBrowse link
G Sgk1 serum/glucocorticoid regulated kinase 1 IMP both spacial learning and enrichment-induced spatial learning facilitation RGD PMID:14656333 RGD:1642778 NCBI chr 1:24,799,391...24,916,886
Ensembl chr 1:22,980,261...23,098,283 		JBrowse link
G Slc7a11 solute carrier family 7 member 11 acts_upstream_of_or_within ISO MGI:3608695 (PMID:21490221), (PMID:24548853) RGD PMID:21490221 PMID:24548853 NCBI chr 2:136,532,912...136,668,560
Ensembl chr 2:133,963,107...134,517,536 		JBrowse link
G Syngap1 synaptic Ras GTPase activating protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3580631 (PMID:12427827)		 Ensembl
RGD		 PMID:12427827 GO_REF:0000107 NCBI chr20:5,028,226...5,058,519
Ensembl chr20:5,026,364...5,056,672 		JBrowse link
G Synpo synaptopodin involved_in ISO (PMID:12928494) RGD PMID:12928494 NCBI chr18:56,326,369...56,347,359
Ensembl chr18:54,026,152...54,102,126 		JBrowse link
G Tafa2 TAFA chemokine like family member 2 involved_in ISO (PMID:30137205) RGD PMID:30137205 NCBI chr 7:60,827,985...61,303,873
Ensembl chr 7:58,942,610...59,417,299 		JBrowse link
G Tanc1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:4125076 (PMID:21068316)		 Ensembl
RGD		 PMID:21068316 GO_REF:0000107 NCBI chr 3:64,508,037...64,741,826
Ensembl chr 3:44,134,016...44,331,627 		JBrowse link
G Ttc36 tetratricopeptide repeat domain 36 acts_upstream_of_or_within ISO MGI:5588394 (PMID:31537781) RGD PMID:31537781 NCBI chr 8:54,009,522...54,013,129 JBrowse link
G Tuba1a tubulin, alpha 1A involved_in ISO MGI:3617352 (PMID:17218254) RGD PMID:17218254 NCBI chr 7:131,992,151...131,996,850
Ensembl chr 7:130,081,032...130,196,186 		JBrowse link
G Zzef1 zinc finger ZZ-type and EF-hand domain containing 1 acts_upstream_of_or_within ISO MGI:3796166|MGI:5474781 (PMID:25709106), (PMID:33158444) RGD PMID:25709106 PMID:33158444 NCBI chr10:57,911,728...58,049,412
Ensembl chr10:57,411,149...57,549,568 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20546
    response to stimulus 11039
      response to abiotic stimulus 1602
        response to radiation 534
          cellular response to radiation + 197
          response to ionizing radiation + 199
          response to light stimulus + 375
paths to the root