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ONTOLOGY REPORT - ANNOTATIONS

Term:nucleoside metabolic process
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Accession:GO:0009116 term browser browse the term
Definition:The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (a ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleoside), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine).
Synonyms:exact_synonym: nucleoside metabolism


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nucleoside metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENSRNOG00000063999 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 4:176,357,771...176,358,582 JBrowse link
G Fpgs folylpolyglutamate synthase involved_in ISO UniProtKB:Q924L9 (PMID:10964921) RGD PMID:10964921 NCBI chr 3:36,370,505...36,391,314
Ensembl chr 3:15,972,800...15,993,563 		JBrowse link
G Nt5c1b 5'-nucleotidase, cytosolic IB acts_upstream_of_or_within ISO (PMID:11690631) RGD PMID:11690631 NCBI chr 6:33,139,053...33,156,489
Ensembl chr 6:33,139,064...33,156,481 		JBrowse link
adenosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nt5e 5' nucleotidase, ecto acts_upstream_of_or_within
involved_in		 IMP
ISO
IEA		 MGI:3522017 (PMID:16547283)
GO_REF:0000107		 RGD
Ensembl		 PMID:16547283 PMID:30269308 GO_REF:0000107, RGD:152995394 NCBI chr 8:98,150,925...98,195,646
Ensembl chr 8:89,270,696...89,314,881 		JBrowse link
adenosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase involved_in
acts_upstream_of_or_within		 ISO
IBA
IEA
IMP
ISS		 (PMID:16670267)
GO_REF:0000033
MGI:1857117|MGI:2155977|MGI:2681791|MGI:2683027 (PMID:10720488), (PMID:10899903), (PMID:11591798), (PMID:14607964), (PMID:15630442), (PMID:1618849), (PMID:16841096), (PMID:18340377), (PMID:2015347), (PMID:2387582), (PMID:7592575), (PMID:7670465), (PMID:7731963), (PMID:8663040), (PMID:8894685), (PMID:9272950), (PMID:9478961)
GO_REF:0000107
(PMID:16742956), (PMID:8064675), (PMID:8672487)
GO_REF:0000024
(PMID:8894685)		 RGD
GO_Central
Ensembl
UniProt		 PMID:1618849 PMID:2015347 PMID:2387582 PMID:7592575 PMID:7670465 More... GO_REF:0000024 GO_REF:0000033 GO_REF:0000107, RGD:152995394 NCBI chr 3:172,818,174...172,842,283
Ensembl chr 3:152,398,747...152,447,088 		JBrowse link
G Uox urate oxidase involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 2:235,486,867...235,523,053
Ensembl chr 2:235,440,619...235,523,029 		JBrowse link
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in ISO (PMID:16462750) RGD PMID:16462750 NCBI chr12:7,709,278...7,718,925
Ensembl chr12:7,709,312...7,718,923 		JBrowse link
G Xdh xanthine dehydrogenase involved_in IEA
ISO
IDA		 GO_REF:0000107
MGI:2448161 (PMID:12502743), (PMID:1590774), (PMID:29895374), (PMID:30936145), (PMID:8226898)
PMID:1619276		 Ensembl
RGD		 PMID:1590774 PMID:8226898 PMID:12502743 PMID:29895374 PMID:30936145 More... GO_REF:0000107, RGD:127285395 NCBI chr 6:27,282,319...27,344,022
Ensembl chr 6:21,530,113...21,592,268 		JBrowse link
adenosine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acp3 acid phosphatase 3 involved_in ISO
IEA		 (PMID:18940592)
GO_REF:0000107		 RGD
Ensembl		 PMID:18940592 GO_REF:0000107 NCBI chr 8:113,784,372...113,833,033
Ensembl chr 8:104,905,586...104,954,236 		JBrowse link
G Ada adenosine deaminase involved_in IDA
TAS
ISO		 (PMID:25644539) RGD PMID:25644539 PMID:4462574 PMID:11038259 PMID:6815190 PMID:12675911 More... RGD:2291853, RGD:631747, RGD:2291855, RGD:2291861, RGD:2291857 NCBI chr 3:172,818,174...172,842,283
Ensembl chr 3:152,398,747...152,447,088 		JBrowse link
G Adk adenosine kinase IDA RGD PMID:12675911 RGD:2291861 NCBI chr15:2,912,543...3,295,745
Ensembl chr15:2,863,244...3,246,510 		JBrowse link
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 acts_upstream_of_or_within ISO MGI:1856982 (PMID:28701731) RGD PMID:28701731 NCBI chr 3:130,269,979...130,280,109
Ensembl chr 3:109,816,366...109,828,308 		JBrowse link
G Nt5c1a 5'-nucleotidase, cytosolic IA involved_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:12675911 GO_REF:0000033, RGD:2291861 NCBI chr 5:135,473,107...135,494,400
Ensembl chr 5:135,473,231...135,499,338 		JBrowse link
G Nt5c1b 5'-nucleotidase, cytosolic IB involved_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:12675911 GO_REF:0000033, RGD:2291861 NCBI chr 6:33,139,053...33,156,489
Ensembl chr 6:33,139,064...33,156,481 		JBrowse link
G Nt5c2 5'-nucleotidase, cytosolic II involved_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:12675911 GO_REF:0000033, RGD:2291861 NCBI chr 1:255,712,797...255,838,285
Ensembl chr 1:245,772,277...245,897,913 		JBrowse link
G Nt5c3a 5'-nucleotidase, cytosolic IIIA IDA RGD PMID:12675911 RGD:2291861 NCBI chr 4:86,161,642...86,204,656
Ensembl chr 4:86,161,643...86,204,628 		JBrowse link
G Nt5e 5' nucleotidase, ecto IDA RGD PMID:12675911 RGD:2291861 NCBI chr 8:98,150,925...98,195,646
Ensembl chr 8:89,270,696...89,314,881 		JBrowse link
G Ptgdr prostaglandin D2 receptor acts_upstream_of_or_within ISO MGI:2386956 (PMID:11562489) RGD PMID:11562489 NCBI chr15:19,790,499...19,797,873
Ensembl chr15:17,360,304...17,367,679 		JBrowse link
cytidine deamination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aicda activation-induced cytidine deaminase involved_in ISO (PMID:12692563) RGD PMID:12692563 NCBI chr 4:157,446,120...157,455,958
Ensembl chr 4:155,774,132...155,783,972 		JBrowse link
G Cda cytidine deaminase involved_in IDA
IBA
ISO		 GO_REF:0000033
(PMID:9596658)		 GO_Central
RGD		 PMID:9596658 PMID:675715 GO_REF:0000033, RGD:2316616 NCBI chr 5:155,839,929...155,866,541
Ensembl chr 5:150,556,615...150,583,231 		JBrowse link
G Cdadc1 cytidine and dCMP deaminase domain containing 1 involved_in ISO
IBA		 (PMID:26945630)
GO_REF:0000033		 RGD
GO_Central		 PMID:26945630 GO_REF:0000033 NCBI chr15:37,902,789...37,934,853
Ensembl chr15:33,723,435...33,755,576 		JBrowse link
G Dctd dCMP deaminase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:44,066,952...44,098,654
Ensembl chr16:44,055,128...44,098,446 		JBrowse link
cytidine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 involved_in IC PMID:10781591 UniProt PMID:10781591 RGD:8553657 NCBI chr 4:157,472,879...157,500,496
Ensembl chr 4:155,800,887...155,827,390 		JBrowse link
deoxyadenosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857117|MGI:2155977|MGI:2683027 (PMID:10720488), (PMID:14607964), (PMID:7592575), (PMID:7670465), (PMID:7731963), (PMID:9272950), (PMID:9478961)
MGI:1857117 (PMID:10720488)		 Ensembl
RGD		 PMID:7592575 PMID:7670465 PMID:7731963 PMID:9272950 PMID:9478961 More... GO_REF:0000107 NCBI chr 3:172,818,174...172,842,283
Ensembl chr 3:152,398,747...152,447,088 		JBrowse link
G Pnp purine nucleoside phosphorylase involved_in ISO (PMID:6771276) RGD PMID:6771276 NCBI chr15:26,644,147...26,651,808
Ensembl chr15:24,170,602...24,203,986 		JBrowse link
G Uox urate oxidase involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 2:235,486,867...235,523,053
Ensembl chr 2:235,440,619...235,523,029 		JBrowse link
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in ISO (PMID:16462750) RGD PMID:16462750 NCBI chr12:7,709,278...7,718,925
Ensembl chr12:7,709,312...7,718,923 		JBrowse link
G Xdh xanthine dehydrogenase involved_in IEA
ISO		 GO_REF:0000107
(PMID:8064675)		 Ensembl
RGD		 PMID:8064675 GO_REF:0000107 NCBI chr 6:27,282,319...27,344,022
Ensembl chr 6:21,530,113...21,592,268 		JBrowse link
deoxycytidine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dck deoxycytidine kinase IMP
IDA		 RGD PMID:7686601 PMID:8305745 RGD:2300398, RGD:2300395 NCBI chr14:19,305,218...19,326,247
Ensembl chr14:19,305,218...19,326,247 		JBrowse link
G Tk2 thymidine kinase 2 IDA RGD PMID:21444706 RGD:5134349 NCBI chr19:708,859...731,786
Ensembl chr19:708,891...730,924 		JBrowse link
deoxyguanosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gda guanine deaminase involved_in IEA
ISO		 GO_REF:0000107
(PMID:8064675)		 Ensembl
RGD		 PMID:8064675 GO_REF:0000107 NCBI chr 1:228,333,401...228,408,901
Ensembl chr 1:218,906,815...218,982,416 		JBrowse link
G Uox urate oxidase involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 2:235,486,867...235,523,053
Ensembl chr 2:235,440,619...235,523,029 		JBrowse link
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in ISO (PMID:16462750) RGD PMID:16462750 NCBI chr12:7,709,278...7,718,925
Ensembl chr12:7,709,312...7,718,923 		JBrowse link
G Xdh xanthine dehydrogenase involved_in IEA
ISO		 GO_REF:0000107
(PMID:29895374), (PMID:30936145), (PMID:8226898)		 Ensembl
RGD		 PMID:8226898 PMID:29895374 PMID:30936145 GO_REF:0000107 NCBI chr 6:27,282,319...27,344,022
Ensembl chr 6:21,530,113...21,592,268 		JBrowse link
deoxyinosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pnp purine nucleoside phosphorylase involved_in ISO (PMID:6771276) RGD PMID:6771276 NCBI chr15:26,644,147...26,651,808
Ensembl chr15:24,170,602...24,203,986 		JBrowse link
G Uox urate oxidase involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 2:235,486,867...235,523,053
Ensembl chr 2:235,440,619...235,523,029 		JBrowse link
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in ISO (PMID:16462750) RGD PMID:16462750 NCBI chr12:7,709,278...7,718,925
Ensembl chr12:7,709,312...7,718,923 		JBrowse link
G Xdh xanthine dehydrogenase involved_in ISO
IEA		 (PMID:1619276)
MGI:2448161 (PMID:12502743), (PMID:1590774), (PMID:29895374), (PMID:30936145), (PMID:8226898)
GO_REF:0000107		 RGD
Ensembl		 PMID:1590774 PMID:1619276 PMID:8226898 PMID:12502743 PMID:29895374 More... GO_REF:0000107 NCBI chr 6:27,282,319...27,344,022
Ensembl chr 6:21,530,113...21,592,268 		JBrowse link
deoxyribonucleoside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dera deoxyribose-phosphate aldolase involved_in ISO (PMID:9226884) RGD PMID:9226884 NCBI chr 4:172,394,971...172,473,746
Ensembl chr 4:170,663,665...170,758,865 		JBrowse link
inosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase acts_upstream_of_or_within
involved_in		 ISO
ISS
IEA
IBA		 (PMID:8894685)
GO_REF:0000024
GO_REF:0000107
(PMID:8672487)
GO_REF:0000033
MGI:1857117|MGI:2681791|MGI:2683027 (PMID:10720488), (PMID:1618849), (PMID:2015347), (PMID:7592575), (PMID:7731963), (PMID:8663040), (PMID:8894685), (PMID:9272950)		 RGD
UniProt
Ensembl
GO_Central		 PMID:1618849 PMID:2015347 PMID:7592575 PMID:7731963 PMID:8663040 More... GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:172,818,174...172,842,283
Ensembl chr 3:152,398,747...152,447,088 		JBrowse link
G Ak1 adenylate kinase 1 IDA RGD PMID:19049516 RGD:5134369 NCBI chr 3:36,310,113...36,320,760
Ensembl chr 3:15,912,485...15,923,041 		JBrowse link
inosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pnp purine nucleoside phosphorylase involved_in
acts_upstream_of_or_within		 ISO (PMID:23438750)
(PMID:16964310)		 RGD PMID:16964310 PMID:23438750 NCBI chr15:26,644,147...26,651,808
Ensembl chr15:24,170,602...24,203,986 		JBrowse link
G Uox urate oxidase involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 2:235,486,867...235,523,053
Ensembl chr 2:235,440,619...235,523,029 		JBrowse link
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in ISO (PMID:16462750) RGD PMID:16462750 NCBI chr12:7,709,278...7,718,925
Ensembl chr12:7,709,312...7,718,923 		JBrowse link
G Xdh xanthine dehydrogenase involved_in IEA
ISO
IDA		 GO_REF:0000107
MGI:2448161 (PMID:12502743), (PMID:1590774), (PMID:29895374), (PMID:30936145), (PMID:8226898)
PMID:1619276
(PMID:1619276)		 Ensembl
RGD		 PMID:1590774 PMID:1619276 PMID:8226898 PMID:12502743 PMID:29895374 More... GO_REF:0000107, RGD:127285395 NCBI chr 6:27,282,319...27,344,022
Ensembl chr 6:21,530,113...21,592,268 		JBrowse link
nicotinamide riboside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mtap methylthioadenosine phosphorylase NOT|involved_in ISO (PMID:19001417) RGD PMID:19001417 NCBI chr 5:108,990,270...109,036,494
Ensembl chr 5:103,873,020...103,939,406 		JBrowse link
G Pnp purine nucleoside phosphorylase involved_in ISO (PMID:19001417) RGD PMID:19001417 NCBI chr15:26,644,147...26,651,808
Ensembl chr15:24,170,602...24,203,986 		JBrowse link
nucleoside salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dctd dCMP deaminase involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:33833118)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:33833118 GO_REF:0000024 GO_REF:0000107 NCBI chr16:44,066,952...44,098,654
Ensembl chr16:44,055,128...44,098,446 		JBrowse link
G Dnph1 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:33833118)		 UniProt
RGD		 PMID:33833118 GO_REF:0000024 NCBI chr 9:21,978,894...21,981,631
Ensembl chr 9:14,481,066...14,484,022 		JBrowse link
G Qng1 Q-nucleotide N-glycosylase 1 involved_in ISO (PMID:36610787) RGD PMID:36610787 NCBI chr17:6,286,801...6,294,400
Ensembl chr17:6,281,400...6,288,975 		JBrowse link
purine deoxyribonucleoside metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dguok deoxyguanosine kinase involved_in ISO (PMID:8706825) RGD PMID:8706825 NCBI chr 4:115,987,101...116,014,733
Ensembl chr 4:115,979,094...116,014,733 		JBrowse link
purine nucleoside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt1 nudix hydrolase 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:11139615)		 UniProt
RGD		 PMID:11139615 GO_REF:0000024 NCBI chr12:14,302,514...14,309,559
Ensembl chr12:14,302,694...14,305,826 		JBrowse link
purine nucleoside metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Macrod1 mono-ADP ribosylhydrolase 1 involved_in IEA
IBA
ISO		 GO_REF:0000107
GO_REF:0000033
(PMID:21257746)		 Ensembl
GO_Central
RGD		 PMID:21257746 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:213,675,413...213,831,571
Ensembl chr 1:204,246,166...204,389,716 		JBrowse link
G Macrod2 mono-ADP ribosylhydrolase 2 involved_in IBA
ISO		 GO_REF:0000033
(PMID:21257746)		 GO_Central
RGD		 PMID:21257746 GO_REF:0000033 NCBI chr 3:148,173,821...150,191,077
Ensembl chr 3:127,720,181...129,734,492 		JBrowse link
G Oard1 O-acyl-ADP-ribose deacylase 1 involved_in IBA
ISO		 GO_REF:0000033
(PMID:21849506)		 GO_Central
RGD		 PMID:21849506 GO_REF:0000033 NCBI chr 9:20,074,507...20,084,946
Ensembl chr 9:12,578,970...12,587,249 		JBrowse link
purine ribonucleoside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Enpp4 ectonucleotide pyrophosphatase/phosphodiesterase 4 involved_in ISO (PMID:22995898) RGD PMID:22995898 NCBI chr 9:16,888,923...16,898,860
Ensembl chr 9:16,887,739...16,898,860 		JBrowse link
purine ribonucleoside salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adk adenosine kinase acts_upstream_of_or_within
involved_in		 NAS
ISO
IEA		 (PMID:14736855)
GO_REF:0000107
GO_REF:0000043		 RGD
Ensembl
UniProt		 PMID:14736855 PMID:8917457 GO_REF:0000043 GO_REF:0000107, RGD:631740 NCBI chr15:2,912,543...3,295,745
Ensembl chr15:2,863,244...3,246,510 		JBrowse link
G Aprt adenine phosphoribosyl transferase involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:96217 (PMID:8485579)		 Ensembl
RGD		 PMID:8485579 GO_REF:0000107 NCBI chr19:67,534,737...67,537,027
Ensembl chr19:50,626,202...50,628,431 		JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857299|MGI:88061 (PMID:10037486), (PMID:12944494), (PMID:8485579), (PMID:8492116)
(PMID:9824441)
GO_REF:0000043		 Ensembl
RGD
UniProt		 PMID:8485579 PMID:8492116 PMID:9824441 PMID:10037486 PMID:12944494 GO_REF:0000043 GO_REF:0000107 NCBI chr  X:137,655,744...137,687,718
Ensembl chr  X:132,736,096...132,768,154 		JBrowse link
G Mtap methylthioadenosine phosphorylase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:108,990,270...109,036,494
Ensembl chr 5:103,873,020...103,939,406 		JBrowse link
G Pgm2 phosphoglucomutase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:44,519,906...44,553,420
Ensembl chr14:44,164,425...44,199,967 		JBrowse link
G Pnp purine nucleoside phosphorylase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr15:26,644,147...26,651,808
Ensembl chr15:24,170,602...24,203,986 		JBrowse link
G Prtfdc1 phosphoribosyl transferase domain containing 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:83,549,608...83,654,517
Ensembl chr17:83,548,803...83,655,179 		JBrowse link
pyrimidine nucleoside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Upb1 beta-ureidopropionase 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:22525402)		 UniProt
RGD		 PMID:22525402 GO_REF:0000024 NCBI chr20:13,216,693...13,243,016
Ensembl chr20:13,217,258...13,243,590 		JBrowse link
pyrimidine nucleoside metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tymp thymidine phosphorylase involved_in ISO (PMID:1590793), (PMID:9924029) RGD PMID:1590793 PMID:9924029 NCBI chr 7:122,318,396...122,323,716
Ensembl chr 7:120,438,770...120,443,874
Ensembl chr 7:120,438,770...120,443,874 		JBrowse link
queuosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Qtrt1 queuine tRNA-ribosyltransferase catalytic subunit 1 TAS RGD PMID:6986171 RGD:724772 NCBI chr 8:19,965,801...19,973,843
Ensembl chr 8:19,966,336...19,973,837 		JBrowse link
S-adenosylhomocysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahcy adenosylhomocysteinase acts_upstream_of_or_within IDA
ISO		 (PMID:12023972) RGD PMID:12023972 PMID:11741948 RGD:730275 NCBI chr 3:164,029,338...164,044,562
Ensembl chr 3:143,569,094...143,584,393 		JBrowse link
S-adenosylhomocysteine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Comt catechol-O-methyltransferase TAS RGD PMID:12584150 RGD:1359089 NCBI chr11:96,072,371...96,091,956
Ensembl chr11:82,568,025...82,587,642 		JBrowse link
G Gamt guanidinoacetate N-methyltransferase IDA RGD PMID:15533043 RGD:1359081 NCBI chr 7:10,099,267...10,102,083
Ensembl chr 7:9,448,628...9,451,778 		JBrowse link
G Gnmt glycine N-methyltransferase involved_in IDA
IMP
IBA		 PMID:10756111
GO_REF:0000033		 GO_Central
RGD		 PMID:15347642 PMID:10756111 GO_REF:0000033, RGD:1359070, RGD:12793006 NCBI chr 9:21,752,235...21,756,368
Ensembl chr 9:14,254,675...14,258,434 		JBrowse link
G Icmt isoprenylcysteine carboxyl methyltransferase IMP RGD PMID:9192075 RGD:2289655 NCBI chr 5:162,804,368...162,811,129
Ensembl chr 5:162,804,368...162,811,128 		JBrowse link
G Pcmt1 protein-L-isoaspartate (D-aspartate) O-methyltransferase 1 IDA RGD PMID:8263531 RGD:729481 NCBI chr 1:2,111,756...2,160,354
Ensembl chr 1:2,111,763...2,159,201 		JBrowse link
G Pemt phosphatidylethanolamine N-methyltransferase IDA RGD PMID:8344945 RGD:729486 NCBI chr10:45,275,434...45,349,651
Ensembl chr10:44,775,911...44,850,013 		JBrowse link
G Pnmt phenylethanolamine-N-methyltransferase TAS RGD PMID:12438084 RGD:1359087 NCBI chr10:83,881,211...83,882,849
Ensembl chr10:83,384,923...83,386,556 		JBrowse link
S-adenosylmethioninamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Icmt isoprenylcysteine carboxyl methyltransferase IMP RGD PMID:9192075 RGD:2289655 NCBI chr 5:162,804,368...162,811,129
Ensembl chr 5:162,804,368...162,811,128 		JBrowse link
thymidine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dtymk deoxythymidylate kinase involved_in ISO (PMID:12614151) RGD PMID:12614151 NCBI chr 9:101,762,899...101,771,733
Ensembl chr 9:94,315,552...94,324,870 		JBrowse link
G Tk1 thymidine kinase 1 involved_in ISO (PMID:14697231) RGD PMID:14697231 NCBI chr10:103,533,449...103,544,818
Ensembl chr10:103,031,521...103,046,920 		JBrowse link
thymidine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpyd dihydropyrimidine dehydrogenase involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:1512248)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:1512248 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:209,293,902...210,159,777
Ensembl chr 2:206,609,122...207,474,982 		JBrowse link
thymidine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC112350.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 3:109,190,742...109,191,879 JBrowse link
G Tk1 thymidine kinase 1 involved_in IDA
ISO		 phosphorylation
(PMID:22385435)		 RGD PMID:22385435 PMID:6642140 RGD:2317232 NCBI chr10:103,533,449...103,544,818
Ensembl chr10:103,031,521...103,046,920 		JBrowse link
G Tk2 thymidine kinase 2 IDA RGD PMID:21444706 RGD:5134349 NCBI chr19:708,859...731,786
Ensembl chr19:708,891...730,924 		JBrowse link
uridine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Upp1 uridine phosphorylase 1 involved_in ISO
IBA		 (PMID:7488099)
GO_REF:0000033
(PMID:23355744), (PMID:7744869)		 RGD
GO_Central		 PMID:7488099 PMID:7744869 PMID:23355744 GO_REF:0000033 NCBI chr14:88,023,155...88,043,036
Ensembl chr14:83,809,960...83,829,462 		JBrowse link
G Upp2 uridine phosphorylase 2 involved_in ISO
IBA		 (PMID:12849978), (PMID:21855639)
(PMID:14715930)
GO_REF:0000033		 RGD
GO_Central		 PMID:12849978 PMID:14715930 PMID:21855639 GO_REF:0000033 NCBI chr 3:43,273,048...43,317,417
Ensembl chr 3:43,273,048...43,317,417 		JBrowse link
uridine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Upp1 uridine phosphorylase 1 acts_upstream_of_or_within ISO MGI:3586525 (PMID:15772079) RGD PMID:15772079 NCBI chr14:88,023,155...88,043,036
Ensembl chr14:83,809,960...83,829,462 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20536
    cellular process 19525
      metabolic process 12160
        small molecule metabolic process 1917
          nucleobase-containing small molecule metabolic process 729
            nucleoside metabolic process 56
              deoxyribonucleoside metabolic process + 14
              negative regulation of nucleoside metabolic process 0
              nucleoside biosynthetic process + 16
              nucleoside catabolic process + 19
              positive regulation of nucleoside metabolic process 0
              purine nucleoside metabolic process + 35
              pyridine nucleoside metabolic process + 2
              pyrimidine nucleoside metabolic process + 15
              regulation of nucleoside metabolic process + 0
              ribonucleoside metabolic process + 37
Path 2
Term Annotations click to browse term
  biological_process 20536
    cellular process 19525
      metabolic process 12160
        primary metabolic process 10746
          nucleobase-containing compound metabolic process 5944
            nucleobase-containing small molecule metabolic process 729
              nucleoside metabolic process 56
                deoxyribonucleoside metabolic process + 14
                negative regulation of nucleoside metabolic process 0
                nucleoside biosynthetic process + 16
                nucleoside catabolic process + 19
                positive regulation of nucleoside metabolic process 0
                purine nucleoside metabolic process + 35
                pyridine nucleoside metabolic process + 2
                pyrimidine nucleoside metabolic process + 15
                regulation of nucleoside metabolic process + 0
                ribonucleoside metabolic process + 37
paths to the root