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ONTOLOGY REPORT - ANNOTATIONS

Term:spermidine biosynthetic process
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Accession:GO:0008295 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of spermidine, N-(3-aminopropyl)-1,4-diaminobutane.
Synonyms:exact_synonym: spermidine anabolism;   spermidine biosynthesis;   spermidine formation;   spermidine synthesis


show annotations for term's descendants           Sort by:
spermidine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amd1 adenosylmethionine decarboxylase 1 involved_in IDA
IMP
IBA
IEA 		GO_REF:0000033
GO_REF:0000043
GO_REF:0000002 		GO_Central
UniProt
InterPro
RGD		 PMID:10430362 PMID:10712236 PMID:1415709 GO_REF:0000002 GO_REF:0000033 GO_REF:0000043, RGD:1578320, RGD:7242911, RGD:7242912 NCBI chr20:43,695,783...43,711,476
Ensembl chr20:43,697,237...43,711,476 		JBrowse link
G LOC120101528 spermidine synthase-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:18,709,548...18,710,782
Ensembl chr 3:18,709,584...18,710,588 		JBrowse link
G Srm spermidine synthase involved_in IDA
IMP
ISO
IBA 		(PMID:17585781)
GO_REF:0000033 		RGD
GO_Central		 PMID:17585781 PMID:12843627 PMID:16931179 PMID:8494549 GO_REF:0000033, RGD:1359042, RGD:7242920, RGD:7242928 NCBI chr 5:164,309,002...164,312,203
Ensembl chr 5:159,025,873...159,029,405 		JBrowse link
positive regulation of spermidine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Paox polyamine oxidase involved_in ISO
IEA 		(PMID:16354669)
GO_REF:0000107 		RGD
Ensembl		 PMID:16354669 GO_REF:0000107 NCBI chr 1:194,919,655...194,928,498
Ensembl chr 1:194,903,273...194,928,504 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20543
    cellular process 19534
      metabolic process 12158
        amine metabolic process 127
          biogenic amine metabolic process 115
            polyamine metabolic process 23
              polyamine biosynthetic process 14
                spermidine biosynthetic process 4
                  negative regulation of spermidine biosynthetic process 0
                  positive regulation of spermidine biosynthetic process 1
                  regulation of spermidine biosynthetic process + 1
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