ONTOLOGY REPORT - ANNOTATIONS
Term: transcription elongation factor complex
Accession: GO:0008023
browse the term
Definition: Any protein complex that interacts with RNA polymerase II to increase (positive transcription elongation factor) or reduce (negative transcription elongation factor) the rate of transcription elongation.
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AFF1
ALF transcription elongation factor 1
part_of
IEA
Ensembl
GO_REF:0000107
NCBI chr 8:131,728,819...131,924,814
Ensembl chr 8:131,728,873...131,924,819
G
AFF4
ALF transcription elongation factor 4
part_of
IEA
Ensembl
GO_REF:0000107
NCBI chr 2:135,196,067...135,283,931
Ensembl chr 2:135,200,076...135,283,675
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CDK9
cyclin dependent kinase 9
part_of
IEA
Ensembl
GO_REF:0000107
NCBI chr 1:268,277,083...268,280,493
Ensembl chr 1:268,276,841...268,281,052
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EAF1
ELL associated factor 1
part_of
IEA IBA
Ensembl GO_Central
GO_REF:0000033 GO_REF:0000107
NCBI chr13:2,654,829...2,671,140
Ensembl chr13:2,654,630...2,671,132
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EAF2
ELL associated factor 2
part_of
IEA IBA
Ensembl GO_Central
GO_REF:0000033 GO_REF:0000107
NCBI chr13:138,632,541...138,681,607
Ensembl chr13:138,648,270...138,681,613
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ELL
elongation factor for RNA polymerase II
part_of
IEA
Ensembl InterPro
GO_REF:0000002 GO_REF:0000107
NCBI chr 2:59,277,164...59,359,986
Ensembl chr 2:59,277,184...59,359,990
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ELL2
elongation factor for RNA polymerase II 2
part_of
IEA IBA
Ensembl GO_Central InterPro
GO_REF:0000002 GO_REF:0000033 GO_REF:0000107
NCBI chr 2:102,518,605...102,591,416
Ensembl chr 2:102,518,608...102,591,394
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ELL3
elongation factor for RNA polymerase II 3
part_of
IEA IBA
InterPro GO_Central Ensembl
GO_REF:0000002 GO_REF:0000033 GO_REF:0000107
NCBI chr 1:127,781,357...127,784,803
Ensembl chr 1:127,781,403...127,784,843
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ELOA
elongin A
part_of
ISO
PMID:8896449
UniProt
PMID:8896449
RGD:8553414
NCBI chr 6:81,564,792...81,582,049
Ensembl chr 6:81,566,801...81,582,048
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ELOF1
elongation factor 1
part_of
IBA
GO_Central
GO_REF:0000033
NCBI chr 2:70,192,508...70,199,926
Ensembl chr 2:70,193,725...70,199,837
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ELP2
elongator acetyltransferase complex subunit 2
part_of
IEA
Ensembl
GO_REF:0000107
NCBI chr 6:119,885,409...119,932,126
Ensembl chr 6:119,885,463...119,932,123
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ELP4
elongator acetyltransferase complex subunit 4
part_of
IEA IBA
Ensembl GO_Central
GO_REF:0000033 GO_REF:0000107
NCBI chr 2:29,006,456...29,230,092
Ensembl chr 2:29,004,987...29,230,077
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ERCC6
ERCC excision repair 6, chromatin remodeling factor
part_of
ISO
(PMID:9326587)
UniProt
PMID:9326587
NCBI chr14:89,998,125...90,075,911
Ensembl chr14:90,002,024...90,075,898
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ICE1
interactor of little elongation complex ELL subunit 1
part_of
IEA
Ensembl
GO_REF:0000107
NCBI chr16:76,195,357...76,254,365
Ensembl chr16:76,195,361...76,254,318
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ICE2
interactor of little elongation complex ELL subunit 2
part_of
IEA
InterPro Ensembl
GO_REF:0000002 GO_REF:0000107
NCBI chr 1:111,489,759...111,560,751
Ensembl chr 1:111,489,772...111,561,911
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LOC100738782
RNA polymerase II elongation factor ELL2 pseudogene
part_of
IEA IBA
InterPro GO_Central
GO_REF:0000002 GO_REF:0000033
NCBI chr X:119,364,226...119,366,109
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MLLT1
MLLT1 super elongation complex subunit
part_of
IEA IBA
Ensembl GO_Central
GO_REF:0000033 GO_REF:0000107
NCBI chr 2:72,780,950...72,847,694
Ensembl chr 2:72,781,121...72,847,685
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MLLT3
MLLT3 super elongation complex subunit
part_of
IEA
Ensembl
GO_REF:0000107
NCBI chr 1:202,317,458...202,604,308
Ensembl chr 1:202,318,929...202,607,058
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NUFIP1
nuclear FMR1 interacting protein 1
part_of
IEA
Ensembl
GO_REF:0000107
NCBI chr11:22,267,447...22,302,714
Ensembl chr11:22,267,481...22,302,707
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SUPT6H
SPT6 homolog, histone chaperone and transcription elongation factor
part_of
IBA
GO_Central
GO_REF:0000033
NCBI chr12:44,916,716...44,940,732
Ensembl chr12:44,917,633...44,940,273
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ZC3H8
zinc finger CCCH-type containing 8
part_of
IEA
Ensembl
GO_REF:0000107
NCBI chr 3:44,161,299...44,195,413
Ensembl chr 3:44,161,310...44,184,683
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CDC73
cell division cycle 73
part_of
IEA IBA
InterPro GO_Central Ensembl
GO_REF:0000002 GO_REF:0000033 GO_REF:0000107
NCBI chr10:575,075...667,618
Ensembl chr10:575,075...667,432
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CTR9
CTR9 homolog, Paf1/RNA polymerase II complex component
part_of
IEA IBA
Ensembl GO_Central
GO_REF:0000033 GO_REF:0000107
NCBI chr 2:48,700,629...48,729,480
Ensembl chr 2:48,700,974...48,729,307
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LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component
part_of
IEA
InterPro Ensembl
GO_REF:0000002 GO_REF:0000107
NCBI chr 1:119,804,992...119,842,343
Ensembl chr 1:119,805,006...119,859,434
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PAF1
PAF1 homolog, Paf1/RNA polymerase II complex component
part_of
IEA IBA
InterPro GO_Central Ensembl
GO_REF:0000002 GO_REF:0000033 GO_REF:0000107
NCBI chr 6:48,046,487...48,053,631
Ensembl chr 6:48,046,502...48,052,038
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PEX2
peroxisomal biogenesis factor 2
part_of
IEA IBA
Ensembl GO_Central
GO_REF:0000033 GO_REF:0000107
NCBI chr 4:59,252,330...59,270,117
Ensembl chr 4:59,252,337...59,270,116
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RTF1
RTF1 homolog, Paf1/RNA polymerase II complex component
part_of
IEA IBA
Ensembl GO_Central
GO_REF:0000033 GO_REF:0000107
NCBI chr 1:129,886,798...129,942,845
Ensembl chr 1:129,886,800...129,943,181
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SKIC8
SKI8 subunit of superkiller complex
part_of
IEA IBA
Ensembl GO_Central
GO_REF:0000033 GO_REF:0000107
NCBI chr 7:47,641,103...47,661,353
Ensembl chr 7:47,641,162...47,659,866
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BRD4
bromodomain containing 4
part_of
ISO
(PMID:23752591)
MGI
PMID:23752591
NCBI chr 2:62,250,958...62,345,851
Ensembl chr 2:62,250,989...62,345,362
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CCNK
cyclin K
part_of
IBA
GO_Central
GO_REF:0000033
NCBI chr 7:120,487,140...120,514,223
Ensembl chr 7:120,487,206...120,514,014
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CCNT1
cyclin T1
part_of
IEA IBA
Ensembl GO_Central
GO_REF:0000033 GO_REF:0000107
NCBI chr 5:14,768,423...14,808,424
Ensembl chr 5:14,768,426...14,806,813
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CCNT2
cyclin T2
part_of
IEA IBA
Ensembl GO_Central
GO_REF:0000033 GO_REF:0000107
NCBI chr15:16,974,364...17,021,293
Ensembl chr15:16,974,038...17,021,298
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CDK12
cyclin dependent kinase 12
part_of
IBA
GO_Central
GO_REF:0000033
NCBI chr12:22,755,365...22,831,397
Ensembl chr12:22,775,226...22,831,333
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CDK13
cyclin dependent kinase 13
part_of
IBA
GO_Central
GO_REF:0000033
NCBI chr18:54,310,311...54,430,060
Ensembl chr18:54,310,324...54,430,786
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CDK9
cyclin dependent kinase 9
part_of
IEA
Ensembl
GO_REF:0000107
NCBI chr 1:268,277,083...268,280,493
Ensembl chr 1:268,276,841...268,281,052
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RB1
RB transcriptional corepressor 1
part_of located_in
IEA ISO
(PMID:12037672)
Ensembl UniProt
PMID:12037672
GO_REF:0000107
NCBI chr11:19,186,754...19,317,642
Ensembl chr11:19,186,761...19,317,690
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SNW1
SNW domain containing 1
part_of located_in
IEA ISO
(PMID:15905409)
Ensembl UniProt
PMID:15905409
GO_REF:0000107
NCBI chr 7:100,718,298...100,749,414
Ensembl chr 7:100,718,036...100,749,356
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SUPT4H1
SPT4 homolog, DSIF elongation factor subunit
part_of
IEA
Ensembl
GO_REF:0000107
NCBI chr12:34,622,775...34,629,681
Ensembl chr12:34,619,729...34,629,646
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SUPT5H
SPT5 homolog, DSIF elongation factor subunit
part_of
IEA IBA
Ensembl GO_Central
GO_REF:0000033 GO_REF:0000107
NCBI chr 6:48,095,001...48,125,120
Ensembl chr 6:48,095,041...48,125,120
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ELOA
elongin A
part_of
IEA
InterPro
GO_REF:0000002
NCBI chr 6:81,564,792...81,582,049
Ensembl chr 6:81,566,801...81,582,048
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ELOB
elongin B
part_of
IEA IBA
InterPro GO_Central
GO_REF:0000002 GO_REF:0000033
NCBI chr 3:39,294,099...39,298,192
Ensembl chr 3:39,293,746...39,298,097
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ELOC
elongin C
part_of
IEA
Ensembl
GO_REF:0000107
NCBI chr 4:61,971,103...61,989,392
Ensembl chr 4:61,971,426...61,990,151
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EPOP
elongin BC and polycomb repressive complex 2 associated protein
part_of
IEA
Ensembl
GO_REF:0000107
NCBI chr12:23,435,388...23,438,235
Ensembl chr12:23,435,402...23,436,541
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MMS22L
MMS22 like, DNA repair protein
part_of located_in
IEA ISO
(PMID:21055985)
Ensembl UniProt
PMID:21055985
GO_REF:0000107
NCBI chr 1:64,306,078...64,459,956
Ensembl chr 1:64,306,073...64,459,904
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SSRP1
structure specific recognition protein 1
part_of
IEA IBA
Ensembl GO_Central
GO_REF:0000033 GO_REF:0000107
NCBI chr 2:13,619,666...13,629,233
Ensembl chr 2:13,619,716...13,629,227
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SUPT16H
SPT16 homolog, facilitates chromatin remodeling subunit
part_of
IEA IBA
InterPro GO_Central Ensembl UniProt
GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107
NCBI chr 7:77,780,968...77,814,519
Ensembl chr 7:77,781,316...77,814,505
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TONSL
tonsoku like, DNA repair protein
part_of located_in
IEA ISO
(PMID:21055983)
Ensembl UniProt
PMID:21055983
GO_REF:0000107
NCBI chr 4:349,992...361,749
Ensembl chr 4:350,060...362,167
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NELFA
negative elongation factor complex member A
part_of
IEA IBA
Ensembl GO_Central
GO_REF:0000033 GO_REF:0000107
NCBI chr 8:1,018,443...1,039,091
Ensembl chr 8:1,018,453...1,039,134
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NELFB
negative elongation factor complex member B
part_of
IEA IBA
Ensembl GO_Central
GO_REF:0000033 GO_REF:0000107
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NELFCD
negative elongation factor complex member C/D
part_of
IEA IBA
Ensembl GO_Central
GO_REF:0000033 GO_REF:0000107
NCBI chr17:59,129,055...59,141,499
Ensembl chr17:59,129,076...59,141,499
G
NELFE
negative elongation factor complex member E
part_of
IEA IBA
InterPro GO_Central Ensembl
GO_REF:0000002 GO_REF:0000033 GO_REF:0000107
NCBI chr 7:24,040,525...24,046,932
Ensembl chr 7:24,040,525...24,047,025
G
CCNT1
cyclin T1
part_of
IEA
Ensembl
GO_REF:0000107
NCBI chr 5:14,768,423...14,808,424
Ensembl chr 5:14,768,426...14,806,813
G
CDK9
cyclin dependent kinase 9
part_of
IEA
Ensembl
GO_REF:0000107
NCBI chr 1:268,277,083...268,280,493
Ensembl chr 1:268,276,841...268,281,052
G
AFF1
ALF transcription elongation factor 1
part_of
IBA
GO_Central
GO_REF:0000033
NCBI chr 8:131,728,819...131,924,814
Ensembl chr 8:131,728,873...131,924,819
G
AFF4
ALF transcription elongation factor 4
part_of
IBA
GO_Central
GO_REF:0000033
NCBI chr 2:135,196,067...135,283,931
Ensembl chr 2:135,200,076...135,283,675
G
EAF1
ELL associated factor 1
part_of
IEA
InterPro
GO_REF:0000002
NCBI chr13:2,654,829...2,671,140
Ensembl chr13:2,654,630...2,671,132
G
EAF2
ELL associated factor 2
part_of
IEA
InterPro
GO_REF:0000002
NCBI chr13:138,632,541...138,681,607
Ensembl chr13:138,648,270...138,681,613
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