ONTOLOGY REPORT - ANNOTATIONS
Term: transcription elongation factor complex
Accession: GO:0008023
browse the term
Definition: Any protein complex that interacts with RNA polymerase II to increase (positive transcription elongation factor) or reduce (negative transcription elongation factor) the rate of transcription elongation.
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AFF1
ALF transcription elongation factor 1
part_of
IEA
Ensembl
GO_REF:0000107
NCBI chr 7:35,309,172...35,516,777
Ensembl chr 7:35,380,578...35,511,446
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AFF4
ALF transcription elongation factor 4
part_of
IEA
Ensembl
GO_REF:0000107
NCBI chr23:35,693,427...35,782,746
Ensembl chr23:35,699,094...35,782,683
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CDK9
cyclin dependent kinase 9
part_of
IEA
Ensembl
GO_REF:0000107
NCBI chr12:10,342,240...10,346,792
Ensembl chr12:10,342,801...10,346,502
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EAF1
ELL associated factor 1
part_of
IEA
Ensembl TreeGrafter
GO_REF:0000107 GO_REF:0000118
NCBI chr15:60,261,013...60,277,177
Ensembl chr15:60,260,967...60,277,626
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EAF2
ELL associated factor 2
part_of
IEA
Ensembl TreeGrafter
GO_REF:0000107 GO_REF:0000118
NCBI chr22:58,966,640...59,025,158
Ensembl chr22:58,974,409...59,025,143
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ELL
elongation factor for RNA polymerase II
part_of
IEA
InterPro Ensembl TreeGrafter
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118
NCBI chr 6:16,915,878...17,000,275
Ensembl chr 6:16,917,953...17,000,230
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ELL2
elongation factor for RNA polymerase II 2
part_of
IEA
InterPro TreeGrafter Ensembl
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118
NCBI chr 4:89,758,483...89,835,773
Ensembl chr 4:89,762,251...89,835,433
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ELL3
elongation factor for RNA polymerase II 3
part_of
IEA
Ensembl TreeGrafter InterPro
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118
NCBI chr26:39,268,461...39,273,833
Ensembl chr26:39,269,538...39,273,321
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ELOA
elongin A
part_of
ISO
PMID:8896449
UniProt
PMID:8896449
RGD:8553414
NCBI chr20:108,922,500...108,940,510
Ensembl chr20:108,921,707...108,940,459
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ELOF1
elongation factor 1
part_of
IEA
TreeGrafter
GO_REF:0000118
NCBI chr 6:10,473,519...10,479,856
Ensembl chr 6:10,474,208...10,474,802
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ELP2
elongator acetyltransferase complex subunit 2
part_of
IEA
Ensembl
GO_REF:0000107
NCBI chr18:44,640,636...44,680,972
Ensembl chr18:44,636,318...44,681,339
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ELP4
elongator acetyltransferase complex subunit 4
part_of
IEA
Ensembl TreeGrafter
GO_REF:0000107 GO_REF:0000118
NCBI chr 1:33,419,313...33,679,046
Ensembl chr 1:33,421,038...33,678,990
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ICE1
interactor of little elongation complex ELL subunit 1
part_of
IEA
Ensembl
GO_REF:0000107
NCBI chr 4:5,150,090...5,216,864
Ensembl chr 4:5,167,199...5,216,933
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ICE2
interactor of little elongation complex ELL subunit 2
part_of
IEA
InterPro Ensembl
GO_REF:0000002 GO_REF:0000107
NCBI chr26:23,011,228...23,068,134
Ensembl chr26:23,011,498...23,063,733
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LOC103215829
DNA excision repair protein ERCC-6
part_of
IEA
Ensembl
GO_REF:0000107
NCBI chr 9:42,288,702...42,370,045
Ensembl chr 9:42,288,825...42,373,906
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MLLT1
MLLT1 super elongation complex subunit
part_of
IEA
Ensembl TreeGrafter
GO_REF:0000107 GO_REF:0000118
NCBI chr 6:5,835,483...5,913,096
Ensembl chr 6:5,834,660...5,913,119
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MLLT3
MLLT3 super elongation complex subunit
part_of
IEA
Ensembl TreeGrafter
GO_REF:0000107 GO_REF:0000118
Ensembl chr12:59,324,048...59,438,174
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NUFIP1
nuclear FMR1 interacting protein 1
part_of
IEA
Ensembl
GO_REF:0000107
NCBI chr 3:23,023,976...23,073,154
Ensembl chr 3:23,022,207...23,081,424
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SUPT6H
SPT6 homolog, histone chaperone and transcription elongation factor
part_of
IEA
TreeGrafter
GO_REF:0000118
NCBI chr16:22,444,864...22,470,248
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ZC3H8
zinc finger CCCH-type containing 8
part_of
IEA
Ensembl
GO_REF:0000107
NCBI chr14:15,284,640...15,325,931
Ensembl chr14:15,303,456...15,325,878
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CDC73
cell division cycle 73
part_of
IEA
InterPro Ensembl TreeGrafter
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118
NCBI chr25:36,167,482...36,302,918
Ensembl chr25:36,170,134...36,302,812
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CTR9
CTR9 homolog, Paf1/RNA polymerase II complex component
part_of
IEA
Ensembl TreeGrafter
GO_REF:0000107 GO_REF:0000118
NCBI chr 1:54,047,922...54,077,049
Ensembl chr 1:54,047,886...54,077,338
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LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component
part_of
IEA
InterPro Ensembl
GO_REF:0000002 GO_REF:0000107
NCBI chr26:31,405,019...31,444,350
Ensembl chr26:31,404,537...31,445,198
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PAF1
PAF1 homolog, Paf1/RNA polymerase II complex component
part_of
IEA
InterPro TreeGrafter Ensembl
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118
NCBI chr 6:33,990,552...33,996,673
Ensembl chr 6:33,986,916...33,996,347
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PEX2
peroxisomal biogenesis factor 2
part_of
IEA
TreeGrafter Ensembl
GO_REF:0000107 GO_REF:0000118
NCBI chr 8:72,513,975...72,532,399
Ensembl chr 8:72,514,307...72,517,003
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RTF1
RTF1 homolog, Paf1/RNA polymerase II complex component
part_of
IEA
Ensembl TreeGrafter
GO_REF:0000107 GO_REF:0000118
NCBI chr26:41,523,610...41,589,014
Ensembl chr26:41,522,542...41,588,948
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SKIC8
SKI8 subunit of superkiller complex
part_of
IEA
TreeGrafter Ensembl
GO_REF:0000107 GO_REF:0000118
NCBI chr26:5,037,386...5,062,578
Ensembl chr26:5,037,443...5,053,707
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BRD4
bromodomain containing 4
part_of
ISO
(PMID:23752591)
MGI
PMID:23752591
NCBI chr 6:13,836,332...13,883,459
Ensembl chr 6:13,836,324...13,873,877
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CCNT1
cyclin T1
part_of
IEA
Ensembl
GO_REF:0000107
NCBI chr11:44,932,774...44,966,412
Ensembl chr11:44,937,350...44,966,018
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CCNT2
cyclin T2
part_of
IEA
Ensembl
GO_REF:0000107
NCBI chr10:19,145,163...19,183,777
Ensembl chr10:19,145,161...19,180,917
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CDK12
cyclin dependent kinase 12
part_of
IEA
TreeGrafter
GO_REF:0000118
NCBI chr16:66,612,238...66,709,437
Ensembl chr16:66,623,785...66,708,755
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CDK13
cyclin dependent kinase 13
part_of
IEA
TreeGrafter
GO_REF:0000118
NCBI chr21:18,551,273...18,688,889
Ensembl chr21:18,553,446...18,688,525
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CDK9
cyclin dependent kinase 9
part_of
IEA
Ensembl
GO_REF:0000107
NCBI chr12:10,342,240...10,346,792
Ensembl chr12:10,342,801...10,346,502
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RB1
RB transcriptional corepressor 1
located_in part_of
ISO IEA
(PMID:12037672)
UniProt Ensembl
PMID:12037672
GO_REF:0000107
NCBI chr 3:26,220,783...26,393,671
Ensembl chr 3:26,220,803...26,394,546
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SNW1
SNW domain containing 1
located_in part_of
ISO IEA
(PMID:15905409)
UniProt Ensembl
PMID:15905409
GO_REF:0000107
NCBI chr24:54,976,597...55,020,051
Ensembl chr24:54,977,083...55,019,988
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SUPT4H1
SPT4 homolog, DSIF elongation factor subunit
part_of
IEA
TreeGrafter
GO_REF:0000118
NCBI chr16:35,047,874...35,054,438
Ensembl chr16:35,047,934...35,054,239
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SUPT5H
SPT5 homolog, DSIF elongation factor subunit
part_of
IEA
TreeGrafter Ensembl
GO_REF:0000107 GO_REF:0000118
NCBI chr 6:34,052,587...34,086,022
Ensembl chr 6:34,052,577...34,085,782
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ELOA
elongin A
part_of
IEA
Ensembl InterPro
GO_REF:0000002 GO_REF:0000107
NCBI chr20:108,922,500...108,940,510
Ensembl chr20:108,921,707...108,940,459
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ELOB
elongin B
part_of
IEA
InterPro TreeGrafter
GO_REF:0000002 GO_REF:0000118
NCBI chr 5:2,564,662...2,570,035
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ELOC
elongin C
part_of
IEA
Ensembl
GO_REF:0000107
NCBI chr 8:69,546,943...69,572,694
Ensembl chr 8:69,545,965...69,560,268
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EPOP
elongin BC and polycomb repressive complex 2 associated protein
part_of
IEA
Ensembl
GO_REF:0000107
NCBI chr16:67,517,405...67,520,630
Ensembl chr16:67,517,838...67,518,977
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LOC103218574
elongin-B
part_of
IEA
InterPro TreeGrafter
GO_REF:0000002 GO_REF:0000118
NCBI chr11:10,042,251...10,042,685
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LOC103222466
elongin A2
part_of
IEA
InterPro
GO_REF:0000002
NCBI chr18:33,919,013...33,922,087
Ensembl chr18:33,919,520...33,921,784
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LOC103248829
elongin-B-like
part_of
IEA
InterPro TreeGrafter
GO_REF:0000002 GO_REF:0000118
NCBI chr 1:121,101,473...121,110,088
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MMS22L
MMS22 like, DNA repair protein
part_of located_in
IEA ISO
(PMID:21055985)
Ensembl UniProt
PMID:21055985
GO_REF:0000107
NCBI chr13:76,611,574...76,750,893
Ensembl chr13:76,611,517...76,750,616
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SSRP1
structure specific recognition protein 1
part_of
IEA
TreeGrafter Ensembl
GO_REF:0000107 GO_REF:0000118
NCBI chr 1:15,907,874...15,918,376
Ensembl chr 1:15,908,495...15,918,596
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SUPT16H
SPT16 homolog, facilitates chromatin remodeling subunit
part_of
IEA
Ensembl TreeGrafter UniProt InterPro
GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118
NCBI chr29:21,822,520...21,855,552
Ensembl chr29:21,822,393...21,855,923
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TONSL
tonsoku like, DNA repair protein
part_of located_in
IEA ISO
(PMID:21055983)
Ensembl UniProt
PMID:21055983
GO_REF:0000107
NCBI chr 8:138,641,514...138,657,429
Ensembl chr 8:138,641,575...138,656,673
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NELFA
negative elongation factor complex member A
part_of
IEA
Ensembl TreeGrafter
GO_REF:0000107 GO_REF:0000118
NCBI chr27:46,759,742...46,786,835
Ensembl chr27:46,760,707...46,787,090
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NELFB
negative elongation factor complex member B
part_of
ISO
(PMID:12612062)
UniProt
PMID:12612062
NCBI chr12:914,384...933,921
G
NELFB
negative elongation factor complex member B
part_of
IEA
Ensembl TreeGrafter
GO_REF:0000107 GO_REF:0000118
Ensembl chr12:913,493...932,063
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NELFCD
negative elongation factor complex member C/D
part_of
IEA
Ensembl TreeGrafter
GO_REF:0000107 GO_REF:0000118
NCBI chr 2:5,146,137...5,159,965
Ensembl chr 2:5,146,575...5,159,883
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NELFE
negative elongation factor complex member E
part_of
IEA
InterPro TreeGrafter Ensembl
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118
NCBI chr17:40,063,298...40,069,714
Ensembl chr17:40,063,755...40,198,451
G
CCNT1
cyclin T1
part_of
IEA
Ensembl
GO_REF:0000107
NCBI chr11:44,932,774...44,966,412
Ensembl chr11:44,937,350...44,966,018
G
CDK9
cyclin dependent kinase 9
part_of
IEA
Ensembl
GO_REF:0000107
NCBI chr12:10,342,240...10,346,792
Ensembl chr12:10,342,801...10,346,502
G
AFF1
ALF transcription elongation factor 1
part_of
IEA
TreeGrafter
GO_REF:0000118
NCBI chr 7:35,309,172...35,516,777
Ensembl chr 7:35,380,578...35,511,446
G
AFF3
ALF transcription elongation factor 3
part_of
IEA
TreeGrafter
GO_REF:0000118
NCBI chr14:3,268,751...3,880,415
Ensembl chr14:3,270,636...3,573,300
G
AFF4
ALF transcription elongation factor 4
part_of
IEA
TreeGrafter
GO_REF:0000118
NCBI chr23:35,693,427...35,782,746
Ensembl chr23:35,699,094...35,782,683
G
EAF1
ELL associated factor 1
part_of
IEA
InterPro
GO_REF:0000002
NCBI chr15:60,261,013...60,277,177
Ensembl chr15:60,260,967...60,277,626
G
EAF2
ELL associated factor 2
part_of
IEA
InterPro
GO_REF:0000002
NCBI chr22:58,966,640...59,025,158
Ensembl chr22:58,974,409...59,025,143
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