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ONTOLOGY REPORT - ANNOTATIONS

Term:transcription elongation factor complex
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Accession:GO:0008023 term browser browse the term
Definition:Any protein complex that interacts with RNA polymerase II to increase (positive transcription elongation factor) or reduce (negative transcription elongation factor) the rate of transcription elongation.


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transcription elongation factor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aff1 ALF transcription elongation factor 1 part_of ISO (PMID:22195968) RGD PMID:22195968 NCBI chr14:5,861,188...6,024,196
Ensembl chr14:5,863,961...6,024,729 		JBrowse link
G Aff4 ALF transcription elongation factor 4 part_of ISO (PMID:22195968) RGD PMID:22195968 NCBI chr10:37,498,825...37,579,751
Ensembl chr10:37,498,825...37,579,751 		JBrowse link
G Cdk9 cyclin-dependent kinase 9 part_of ISS
ISO		 GO_REF:0000024
(PMID:22195968)		 UniProt
RGD		 PMID:22195968 GO_REF:0000024 NCBI chr 3:15,996,467...16,001,315
Ensembl chr 3:15,996,468...16,002,410 		JBrowse link
G Eaf1 ELL associated factor 1 part_of ISO
IBA		 (PMID:22195968)
GO_REF:0000033		 RGD
GO_Central		 PMID:22195968 GO_REF:0000033 NCBI chr16:6,698,322...6,713,071
Ensembl chr16:6,698,322...6,713,071 		JBrowse link
G Eaf2 ELL associated factor 2 part_of ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:22195968)		 UniProt
GO_Central
RGD		 PMID:22195968 GO_REF:0000024 GO_REF:0000033 NCBI chr11:63,960,200...64,004,610
Ensembl chr11:63,960,200...64,004,610 		JBrowse link
G Ell elongation factor for RNA polymerase II part_of ISO
IBA		 (PMID:22195968), (PMID:23932780)
GO_REF:0000033		 RGD
GO_Central		 PMID:22195968 PMID:23932780 GO_REF:0000033 NCBI chr16:18,843,775...18,891,484
Ensembl chr16:18,843,780...18,891,118 		JBrowse link
G Ell2 elongation factor for RNA polymerase II 2 part_of ISO
IBA		 (PMID:22195968)
GO_REF:0000033		 RGD
GO_Central		 PMID:22195968 GO_REF:0000033 NCBI chr 2:5,189,375...5,258,781
Ensembl chr 2:5,189,971...5,258,781 		JBrowse link
G Ell2l1 elongation factor for RNA polymerase II 2 like 1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:145,878,600...145,888,249
Ensembl chr  X:145,878,614...145,887,896 		JBrowse link
G Ell3 elongation factor for RNA polymerase II 3 part_of ISO
IBA
IEA
ISS		 (PMID:22195968)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000002
GO_REF:0000024		 RGD
GO_Central
Ensembl
InterPro
UniProt		 PMID:22195968 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:108,413,035...108,417,181
Ensembl chr 3:108,410,448...108,417,132 		JBrowse link
G Eloa elongin A part_of IDA PMID:8896449 UniProt PMID:8896449 RGD:8553414 NCBI chr 5:148,231,600...148,246,760
Ensembl chr 5:148,231,596...148,246,765 		JBrowse link
G Elof1 elongation factor 1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:20,645,336...20,650,888
Ensembl chr 8:20,645,336...20,650,579 		JBrowse link
G Elp2 elongator acetyltransferase complex subunit 2 part_of ISO (PMID:11714725) RGD PMID:11714725 NCBI chr18:15,885,940...15,921,564
Ensembl chr18:15,885,934...15,921,599 		JBrowse link
G Elp4 elongator acetyltransferase complex subunit 4 part_of ISO
IBA		 (PMID:11714725), (PMID:11818576)
GO_REF:0000033		 RGD
GO_Central		 PMID:11714725 PMID:11818576 GO_REF:0000033 NCBI chr 3:92,162,271...92,385,251
Ensembl chr 3:92,162,280...92,385,243 		JBrowse link
G Elp4-ps1 elongator acetyltransferase complex subunit 4, pseudogene 1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:172,729,315...172,730,773
Ensembl chr 2:172,728,560...172,730,748 		JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor part_of ISO (PMID:9326587) RGD PMID:9326587 NCBI chr16:7,764,983...7,835,587
Ensembl chr16:7,765,013...7,835,587 		JBrowse link
G Ice1 interactor of little elongation complex ELL subunit 1 part_of ISO (PMID:23932780) RGD PMID:23932780 NCBI chr 1:32,640,372...32,682,669
Ensembl chr 1:32,640,407...32,679,898 		JBrowse link
G Ice2 interactor of little elongation complex ELL subunit 2 part_of ISO (PMID:22195968), (PMID:23932780) RGD PMID:22195968 PMID:23932780 NCBI chr 8:70,043,419...70,085,217
Ensembl chr 8:70,043,424...70,084,995 		JBrowse link
G Mllt1 MLLT1, super elongation complex subunit part_of ISO
IBA		 (PMID:22195968)
GO_REF:0000033		 RGD
GO_Central		 PMID:22195968 GO_REF:0000033 NCBI chr 9:1,731,077...1,775,985
Ensembl chr 9:1,731,080...1,775,970 		JBrowse link
G Mllt3 MLLT3, super elongation complex subunit part_of ISO
IBA		 (PMID:22195968), (PMID:25417107), (PMID:27105114)
GO_REF:0000033		 RGD
GO_Central		 PMID:22195968 PMID:25417107 PMID:27105114 GO_REF:0000033 NCBI chr 5:102,259,075...102,515,447
Ensembl chr 5:102,260,011...102,515,361 		JBrowse link
G Nufip1 nuclear FMR1 interacting protein 1 part_of ISO (PMID:15107825) RGD PMID:15107825 NCBI chr15:51,429,518...51,460,308
Ensembl chr15:51,429,549...51,460,310 		JBrowse link
G Supt6h SPT6 homolog, histone chaperone and transcription elongation factor part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:63,103,920...63,140,780
Ensembl chr10:63,103,921...63,140,780 		JBrowse link
G Zc3h8 zinc finger CCCH type containing 8 part_of ISO (PMID:23932780) RGD PMID:23932780 NCBI chr 3:116,176,779...116,193,752
Ensembl chr 3:116,176,798...116,193,787 		JBrowse link
Cdc73/Paf1 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc73 cell division cycle 73 part_of ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000107
(PMID:16307923), (PMID:18987311), (PMID:20178742)		 UniProt
GO_Central
Ensembl
RGD		 PMID:16307923 PMID:18987311 PMID:20178742 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr13:55,357,226...55,449,690
Ensembl chr13:55,357,226...55,449,656 		JBrowse link
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component part_of ISO
IBA		 (PMID:16307923), (PMID:20178742)
UniProtKB:Q8JZM7 (PMID:27749823)
GO_REF:0000033
UniProtKB:Q8JZM7 (MGI:6203683|PMID:27749823)		 RGD
GO_Central		 PMID:16307923 PMID:20178742 PMID:27749823 GO_REF:0000033 MGI:6203683 NCBI chr 1:165,137,277...165,167,303
Ensembl chr 1:165,137,215...165,167,303 		JBrowse link
G Leo1 LEO1 homolog, Paf1/RNA polymerase II complex component part_of ISS
ISO		 GO_REF:0000024
(PMID:16307923), (PMID:18987311), (PMID:20178742)		 UniProt
RGD		 PMID:16307923 PMID:18987311 PMID:20178742 GO_REF:0000024 NCBI chr 8:76,199,547...76,223,983
Ensembl chr 8:76,199,099...76,223,983 		JBrowse link
G Paf1 PAF1 homolog, Paf1/RNA polymerase II complex component part_of ISS
ISO
IBA		 GO_REF:0000024
UniProtKB:Q8JZM7 (PMID:27749823)
GO_REF:0000033
UniProtKB:Q8JZM7 (MGI:6203683|PMID:27749823)
(PMID:16307923), (PMID:20178742)		 UniProt
RGD
GO_Central		 PMID:16307923 PMID:20178742 PMID:27749823 GO_REF:0000024 GO_REF:0000033 MGI:6203683 NCBI chr 1:83,683,654...83,689,233
Ensembl chr 1:83,668,813...83,689,237 		JBrowse link
G Pex2 peroxisomal biogenesis factor 2 part_of ISO
IBA
IEA		 (PMID:18987311)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:18987311 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:96,050,380...96,072,928
Ensembl chr 2:96,045,958...96,073,404 		JBrowse link
G Rtf1 Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) part_of ISO
IBA		 (PMID:20178742)
UniProtKB:Q8JZM7 (PMID:27749823)
GO_REF:0000033
UniProtKB:Q8JZM7 (MGI:6203683|PMID:27749823)		 RGD
GO_Central		 PMID:20178742 PMID:27749823 GO_REF:0000033 MGI:6203683 NCBI chr 3:106,659,363...106,718,956
Ensembl chr 3:106,659,308...106,718,970 		JBrowse link
G Skic8 SKI8 subunit of superkiller complex part_of ISO
IBA
IEA
ISS		 (PMID:20178742)
GO_REF:0000033
GO_REF:0000107
UniProtKB:Q8JZM7 (MGI:6203683|PMID:27749823)
GO_REF:0000024		 RGD
GO_Central
Ensembl
UniProt		 PMID:20178742 PMID:27749823 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 MGI:6203683 NCBI chr 8:55,103,542...55,120,837
Ensembl chr 8:55,103,545...55,120,813 		JBrowse link
cyclin/CDK positive transcription elongation factor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brd4 bromodomain containing 4 part_of ISO (PMID:23752591) RGD PMID:23752591 NCBI chr 7:11,216,446...11,296,029
Ensembl chr 7:11,216,446...11,295,539 		JBrowse link
G Ccnk cyclin K part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:127,090,115...127,113,195
Ensembl chr 6:127,090,569...127,113,191 		JBrowse link
G Ccnt1 cyclin T1 part_of IBA
ISO		 GO_REF:0000033
(PMID:15905409), (PMID:18566585), (PMID:9499409)		 GO_Central
RGD		 PMID:9499409 PMID:15905409 PMID:18566585 GO_REF:0000033 NCBI chr 7:129,687,146...129,718,080
Ensembl chr 7:129,691,209...129,717,871 		JBrowse link
G Ccnt2 cyclin T2 part_of IBA
ISO		 GO_REF:0000033
(PMID:9499409)		 GO_Central
RGD		 PMID:9499409 GO_REF:0000033 NCBI chr13:39,251,573...39,293,172
Ensembl chr13:39,251,573...39,292,019 		JBrowse link
G Cdk12 cyclin-dependent kinase 12 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:83,201,177...83,256,906
Ensembl chr10:83,201,211...83,280,888
Ensembl chr10:83,201,211...83,280,888 		JBrowse link
G Cdk13 cyclin-dependent kinase 13 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:47,251,145...47,344,675
Ensembl chr17:47,251,163...47,341,721 		JBrowse link
G Cdk9 cyclin-dependent kinase 9 part_of ISS
ISO		 GO_REF:0000024
(PMID:15905409), (PMID:18566585), (PMID:9499409)
(PMID:23752591)		 UniProt
RGD		 PMID:9499409 PMID:15905409 PMID:18566585 PMID:23752591 GO_REF:0000024 NCBI chr 3:15,996,467...16,001,315
Ensembl chr 3:15,996,468...16,002,410 		JBrowse link
G Rb1 RB transcriptional corepressor 1 part_of
located_in		 IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(PMID:12037672)		 Ensembl
UniProt
RGD		 PMID:12037672 GO_REF:0000024 GO_REF:0000107 NCBI chr15:48,371,295...48,502,473
Ensembl chr15:48,371,296...48,502,302 		JBrowse link
G Snw1 SNW domain containing 1 located_in ISO (PMID:15905409) RGD PMID:15905409 NCBI chr 6:107,095,450...107,119,536
Ensembl chr 6:107,095,457...107,119,536 		JBrowse link
DSIF complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Supt4h1 SPT4 homolog, DSIF elongation factor subunit part_of IBA
ISO		 GO_REF:0000033
(PMID:19860741), (PMID:9450929)		 GO_Central
RGD		 PMID:9450929 PMID:19860741 GO_REF:0000033 NCBI chr10:72,539,323...72,545,582
Ensembl chr10:72,539,382...72,545,831 		JBrowse link
G Supt5h SPT5 homolog, DSIF elongation factor subunit part_of IBA
ISO		 GO_REF:0000033
(PMID:19860741), (PMID:9450929)		 GO_Central
RGD		 PMID:9450929 PMID:19860741 GO_REF:0000033 NCBI chr 1:83,586,713...83,616,971
Ensembl chr 1:83,586,718...83,616,892 		JBrowse link
elongin complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07002622.1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 1:76,426,358...76,427,521 JBrowse link
G Eloa elongin A part_of ISO
IEA		 (PMID:7660122)
GO_REF:0000002
GO_REF:0000107		 RGD
InterPro
Ensembl		 PMID:7660122 GO_REF:0000002 GO_REF:0000107 NCBI chr 5:148,231,600...148,246,760
Ensembl chr 5:148,231,596...148,246,765 		JBrowse link
G Elob elongin B part_of ISO
IEA
IBA		 (MGI:5499725|PMID:16498413)
(PMID:7660122)
GO_REF:0000002
GO_REF:0000033
(PMID:16498413)		 RGD
InterPro
GO_Central		 PMID:7660122 PMID:16498413 GO_REF:0000002 GO_REF:0000033 MGI:5499725 NCBI chr10:12,848,830...12,853,897
Ensembl chr10:12,848,827...12,853,635 		JBrowse link
G Elob-ps13 elongin B, pseduogene 13 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:21,021,825...21,022,305
Ensembl chr 3:21,021,861...21,022,169
Ensembl chr 3:21,021,861...21,022,169 		JBrowse link
G Elob-ps14 elongin B, pseduogene 14 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:20,995,056...20,995,790 JBrowse link
G Elob-ps15 elongin B, pseduogene 15 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:21,025,194...21,026,182 JBrowse link
G Elob-ps3 elongin B, pseduogene 3 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:21,002,336...21,003,559 JBrowse link
G Elob-ps4 elongin B, pseduogene 4 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:73,749,869...73,750,223
Ensembl chr10:73,747,952...73,750,403 		JBrowse link
G Elob-ps5 elongin B, pseduogene 5 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:21,029,142...21,030,159 JBrowse link
G Elob-ps7 elongin B, pseduogene 7 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:20,990,504...20,992,516 JBrowse link
G Elob-ps8 elongin B, pseduogene 8 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:21,017,264...21,018,340 JBrowse link
G Elobl7 elongin B like 7 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:110,995,164...110,995,624
Ensembl chr 8:110,989,940...110,995,640 		JBrowse link
G Elobl9 elongin B like 9 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:73,765,641...73,765,970
Ensembl chr10:73,765,617...73,765,970 		JBrowse link
G Eloc elongin C part_of ISO
IBA		 (MGI:5499725|PMID:16498413)
(PMID:7660122)
GO_REF:0000033
(PMID:16498413)		 RGD
GO_Central		 PMID:7660122 PMID:16498413 GO_REF:0000033 MGI:5499725 NCBI chr 5:2,661,527...2,677,893
Ensembl chr 5:2,661,724...2,677,890 		JBrowse link
G Elocl1 elongin C like 1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:16,989,717...16,991,140
Ensembl chr12:16,989,748...16,990,086 		JBrowse link
G ENSRNOG00000063973 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr  X:115,936,708...115,937,864 JBrowse link
G ENSRNOG00000064158 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 3:21,002,979...21,003,786 JBrowse link
G ENSRNOG00000065620 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 3:21,006,946...21,007,741 JBrowse link
G ENSRNOG00000066103 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 3:21,025,824...21,026,620 JBrowse link
G ENSRNOG00000066836 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 8:3,228,866...3,234,903 JBrowse link
G ENSRNOG00000068416 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 3:21,017,907...21,018,712 JBrowse link
G ENSRNOG00000069411 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 3:21,029,748...21,030,080 JBrowse link
G ENSRNOG00000070656 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 6:76,070,756...76,077,309 JBrowse link
G ENSRNOG00000071067 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 4:126,816,739...126,817,049 JBrowse link
G Epop elongin BC and polycomb repressive complex 2 associated protein part_of ISO (MGI:5822936|PMID:27863225)
(PMID:27863225)		 RGD PMID:27863225 MGI:5822936 NCBI chr10:82,624,392...82,625,912
Ensembl chr10:82,624,392...82,625,912 		JBrowse link
G LOC120099279 elongin-C-like part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:93,341,760...93,342,187 JBrowse link
G LOC134480734 elongin-B-like part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033
G LOC134482328 elongin-C-like part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033
G LOC134482331 elongin-C-like part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033
G LOC134482335 elongin-C-like part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033
G LOC134482347 elongin-C-like part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033
G LOC134482356 elongin-C-like part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033
G LOC134482479 elongin-C-like part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033
G LOC134482480 elongin-C-like part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033
G LOC134482485 elongin-C-like part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033
G LOC134482488 elongin-C-like part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033
G LOC134486081 elongin-B-like part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033
G LOC134486082 elongin-B-like part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033
G LOC134486083 elongin-B-like part_of IEA GO_REF:0000002 InterPro GO_REF:0000002
G LOC134486084 elongin-B-like part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033
G LOC134486085 elongin-B-like part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033
FACT complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mms22l MMS22-like, DNA repair protein located_in ISO (PMID:21055985) RGD PMID:21055985 NCBI chr 5:38,197,707...38,313,745
Ensembl chr 5:38,197,779...38,313,745 		JBrowse link
G Ssrp1 structure specific recognition protein 1 part_of IEA
ISO
IBA		 GO_REF:0000107
(PMID:16902406)
GO_REF:0000033		 Ensembl
RGD
GO_Central		 PMID:16902406 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:70,124,371...70,134,481
Ensembl chr 3:70,118,655...70,134,482 		JBrowse link
G Supt16h SPT16 homolog, facilitates chromatin remodeling subunit part_of IBA
ISO		 GO_REF:0000033
(PMID:16902406)		 GO_Central
RGD		 PMID:16902406 GO_REF:0000033 NCBI chr15:24,867,697...24,904,818
Ensembl chr15:24,866,489...24,904,846 		JBrowse link
G Tonsl tonsoku-like, DNA repair protein located_in ISS
ISO		 GO_REF:0000024
(PMID:21055983)		 UniProt
RGD		 PMID:21055983 GO_REF:0000024 NCBI chr 7:108,345,704...108,360,792
Ensembl chr 7:108,346,047...108,360,750 		JBrowse link
NELF complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nelfa negative elongation factor complex member A part_of ISO
IBA		 (PMID:12612062)
GO_REF:0000033		 RGD
GO_Central		 PMID:12612062 GO_REF:0000033 NCBI chr14:76,808,920...76,832,998
Ensembl chr14:76,808,870...76,832,994 		JBrowse link
G Nelfb negative elongation factor complex member B part_of ISO
IBA		 (PMID:12612062)
GO_REF:0000033		 RGD
GO_Central		 PMID:12612062 GO_REF:0000033 NCBI chr 3:8,010,883...8,027,403
Ensembl chr 3:8,010,888...8,027,403 		JBrowse link
G Nelfcd negative elongation factor complex member C/D part_of ISO
IBA		 (PMID:12612062)
GO_REF:0000033		 RGD
GO_Central		 PMID:12612062 GO_REF:0000033 NCBI chr 3:163,213,765...163,224,886
Ensembl chr 3:163,213,762...163,224,884 		JBrowse link
G Nelfe negative elongation factor complex member E part_of ISO
IBA		 (PMID:12612062)
GO_REF:0000033		 RGD
GO_Central		 PMID:12612062 GO_REF:0000033 NCBI chr20:3,976,512...3,982,389
Ensembl chr20:3,976,518...3,982,355 		JBrowse link
P-TEFb complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnt1 cyclin T1 part_of ISO (PMID:18483487), (PMID:28431135), (PMID:29849146), (PMID:30134174) RGD PMID:18483487 PMID:28431135 PMID:29849146 PMID:30134174 NCBI chr 7:129,687,146...129,718,080
Ensembl chr 7:129,691,209...129,717,871 		JBrowse link
G Cdk9 cyclin-dependent kinase 9 part_of ISS
ISO
IEA		 GO_REF:0000024
(PMID:18483487), (PMID:30134174)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:18483487 PMID:30134174 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:15,996,467...16,001,315
Ensembl chr 3:15,996,468...16,002,410 		JBrowse link
super elongation complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aff1 ALF transcription elongation factor 1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:5,861,188...6,024,196
Ensembl chr14:5,863,961...6,024,729 		JBrowse link
G Aff2 ALF transcription elongation factor 2 NOT|part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:147,928,130...148,432,484
Ensembl chr  X:147,928,407...148,429,995 		JBrowse link
G Aff3 ALF transcription elongation factor 3 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:40,399,099...40,856,716
Ensembl chr 9:40,404,375...40,857,247 		JBrowse link
G Aff4 ALF transcription elongation factor 4 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:37,498,825...37,579,751
Ensembl chr10:37,498,825...37,579,751 		JBrowse link
G Eaf1 ELL associated factor 1 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr16:6,698,322...6,713,071
Ensembl chr16:6,698,322...6,713,071 		JBrowse link
G Eaf2 ELL associated factor 2 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr11:63,960,200...64,004,610
Ensembl chr11:63,960,200...64,004,610 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20814
    cellular anatomical structure 20574
      nucleoplasm 3587
        transcription elongation factor complex 89
          Cdc73/Paf1 complex 7
          DSIF complex 2
          FACT complex 4
          NELF complex 4
          cyclin/CDK positive transcription elongation factor complex + 9
          elongin complex 41
          nucleoplasmic THO complex 0
          super elongation complex 6
Path 2
Term Annotations click to browse term
  cellular_component 20814
    cellular anatomical structure 20574
      intracellular anatomical structure 15185
        intracellular organelle 13599
          intracellular membrane-bounded organelle 12057
            nucleus 7485
              nuclear lumen 4086
                nucleoplasm 3587
                  transcription elongation factor complex 89
                    Cdc73/Paf1 complex 7
                    DSIF complex 2
                    FACT complex 4
                    NELF complex 4
                    cyclin/CDK positive transcription elongation factor complex + 9
                    elongin complex 41
                    nucleoplasmic THO complex 0
                    super elongation complex 6
paths to the root